Commit 31bfafa2 authored by Thomas Witkowski's avatar Thomas Witkowski
Browse files

First working Rosenbrock method implementation finished.

parent 306edc43
......@@ -38,37 +38,104 @@ endif(ENABLE_INTEL)
SET(LIB_DIR ./lib)
SET(SOURCE_DIR ./src)
SET(AMDIS_SRC ${SOURCE_DIR}/DOFIndexed.cc ${SOURCE_DIR}/GNUPlotWriter.cc ${SOURCE_DIR}/VertexVector.cc
${SOURCE_DIR}/PeriodicBC.cc ${SOURCE_DIR}/Recovery.cc ${SOURCE_DIR}/RecoveryEstimator.cc
${SOURCE_DIR}/ResidualEstimator.cc ${SOURCE_DIR}/Cholesky.cc ${SOURCE_DIR}/AdaptBase.cc
${SOURCE_DIR}/StandardProblemIteration.cc ${SOURCE_DIR}/ProblemScal.cc ${SOURCE_DIR}/ProblemVec.cc
${SOURCE_DIR}/ProblemVecDbg.cc ${SOURCE_DIR}/DualTraverse.cc ${SOURCE_DIR}/ElementData.cc
${SOURCE_DIR}/ComponentTraverseInfo.cc ${SOURCE_DIR}/CreatorMap.cc ${SOURCE_DIR}/ProblemInterpolScal.cc
${SOURCE_DIR}/ProblemInterpolVec.cc ${SOURCE_DIR}/MacroReader.cc ${SOURCE_DIR}/ValueReader.cc
${SOURCE_DIR}/Projection.cc ${SOURCE_DIR}/SubAssembler.cc ${SOURCE_DIR}/ZeroOrderAssembler.cc
${SOURCE_DIR}/FirstOrderAssembler.cc ${SOURCE_DIR}/SecondOrderAssembler.cc ${SOURCE_DIR}/Assembler.cc
${SOURCE_DIR}/AdaptInfo.cc ${SOURCE_DIR}/Marker.cc ${SOURCE_DIR}/SurfaceQuadrature.cc
${SOURCE_DIR}/LeafData.cc ${SOURCE_DIR}/BoundaryManager.cc ${SOURCE_DIR}/DirichletBC.cc
${SOURCE_DIR}/RobinBC.cc ${SOURCE_DIR}/FileWriter.cc ${SOURCE_DIR}/ElementFileWriter.cc
${SOURCE_DIR}/ElInfo.cc ${SOURCE_DIR}/ElInfoStack.cc ${SOURCE_DIR}/OperatorTerm.cc
${SOURCE_DIR}/ZeroOrderTerm.cc ${SOURCE_DIR}/FirstOrderTerm.cc ${SOURCE_DIR}/SecondOrderTerm.cc
${SOURCE_DIR}/Operator.cc ${SOURCE_DIR}/Mesh.cc ${SOURCE_DIR}/MeshStructure.cc
${SOURCE_DIR}/AdaptStationary.cc ${SOURCE_DIR}/AdaptInstationary.cc
${SOURCE_DIR}/DOFVector.cc ${SOURCE_DIR}/Estimator.cc ${SOURCE_DIR}/ProblemInstat.cc ${SOURCE_DIR}/ProblemNonLin.cc
${SOURCE_DIR}/NonLinUpdater.cc ${SOURCE_DIR}/QPsiPhi.cc ${SOURCE_DIR}/BasisFunction.cc ${SOURCE_DIR}/Boundary.cc
${SOURCE_DIR}/CoarseningManager.cc ${SOURCE_DIR}/CoarseningManager1d.cc ${SOURCE_DIR}/CoarseningManager2d.cc
${SOURCE_DIR}/CoarseningManager3d.cc ${SOURCE_DIR}/DOFAdmin.cc ${SOURCE_DIR}/DOFMatrix.cc ${SOURCE_DIR}/Element.cc
${SOURCE_DIR}/ElInfo1d.cc ${SOURCE_DIR}/ElInfo2d.cc ${SOURCE_DIR}/ElInfo3d.cc ${SOURCE_DIR}/FiniteElemSpace.cc
${SOURCE_DIR}/FixVec.cc ${SOURCE_DIR}/Global.cc ${SOURCE_DIR}/Lagrange.cc ${SOURCE_DIR}/Line.cc
${SOURCE_DIR}/MacroElement.cc ${SOURCE_DIR}/MacroWriter.cc ${SOURCE_DIR}/Parameters.cc ${SOURCE_DIR}/Parametric.cc
${SOURCE_DIR}/Quadrature.cc ${SOURCE_DIR}/RCNeighbourList.cc ${SOURCE_DIR}/RefinementManager.cc
${SOURCE_DIR}/RefinementManager1d.cc ${SOURCE_DIR}/RefinementManager2d.cc ${SOURCE_DIR}/RefinementManager3d.cc
${SOURCE_DIR}/Tetrahedron.cc ${SOURCE_DIR}/Traverse.cc ${SOURCE_DIR}/TraverseParallel.cc ${SOURCE_DIR}/Triangle.cc
${SOURCE_DIR}/TecPlotWriter.cc ${SOURCE_DIR}/ValueWriter.cc ${SOURCE_DIR}/VtkWriter.cc ${SOURCE_DIR}/PngWriter.cc
${SOURCE_DIR}/PovrayWriter.cc ${SOURCE_DIR}/DataCollector.cc ${SOURCE_DIR}/ScalableQuadrature.cc
${SOURCE_DIR}/SubElInfo.cc ${SOURCE_DIR}/parallel/InteriorBoundary.cc ${SOURCE_DIR}/ElementDofIterator.cc
SET(AMDIS_SRC ${SOURCE_DIR}/DOFIndexed.cc
${SOURCE_DIR}/GNUPlotWriter.cc
${SOURCE_DIR}/VertexVector.cc
${SOURCE_DIR}/PeriodicBC.cc
${SOURCE_DIR}/Recovery.cc
${SOURCE_DIR}/RecoveryEstimator.cc
${SOURCE_DIR}/ResidualEstimator.cc
${SOURCE_DIR}/Cholesky.cc
${SOURCE_DIR}/AdaptBase.cc
${SOURCE_DIR}/StandardProblemIteration.cc
${SOURCE_DIR}/ProblemScal.cc
${SOURCE_DIR}/ProblemVec.cc
${SOURCE_DIR}/ProblemVecDbg.cc
${SOURCE_DIR}/DualTraverse.cc
${SOURCE_DIR}/ElementData.cc
${SOURCE_DIR}/ComponentTraverseInfo.cc
${SOURCE_DIR}/CreatorMap.cc
${SOURCE_DIR}/ProblemInterpolScal.cc
${SOURCE_DIR}/ProblemInterpolVec.cc
${SOURCE_DIR}/MacroReader.cc
${SOURCE_DIR}/ValueReader.cc
${SOURCE_DIR}/Projection.cc
${SOURCE_DIR}/SubAssembler.cc
${SOURCE_DIR}/ZeroOrderAssembler.cc
${SOURCE_DIR}/FirstOrderAssembler.cc
${SOURCE_DIR}/SecondOrderAssembler.cc
${SOURCE_DIR}/Assembler.cc
${SOURCE_DIR}/AdaptInfo.cc
${SOURCE_DIR}/Marker.cc
${SOURCE_DIR}/SurfaceQuadrature.cc
${SOURCE_DIR}/LeafData.cc
${SOURCE_DIR}/BoundaryManager.cc
${SOURCE_DIR}/DirichletBC.cc
${SOURCE_DIR}/RobinBC.cc
${SOURCE_DIR}/FileWriter.cc
${SOURCE_DIR}/ElementFileWriter.cc
${SOURCE_DIR}/ElInfo.cc
${SOURCE_DIR}/ElInfoStack.cc
${SOURCE_DIR}/OperatorTerm.cc
${SOURCE_DIR}/ZeroOrderTerm.cc
${SOURCE_DIR}/FirstOrderTerm.cc
${SOURCE_DIR}/SecondOrderTerm.cc
${SOURCE_DIR}/Operator.cc
${SOURCE_DIR}/Mesh.cc
${SOURCE_DIR}/MeshStructure.cc
${SOURCE_DIR}/AdaptStationary.cc
${SOURCE_DIR}/AdaptInstationary.cc
${SOURCE_DIR}/DOFVector.cc
${SOURCE_DIR}/Estimator.cc
${SOURCE_DIR}/ProblemInstat.cc
${SOURCE_DIR}/ProblemNonLin.cc
${SOURCE_DIR}/NonLinUpdater.cc
${SOURCE_DIR}/QPsiPhi.cc
${SOURCE_DIR}/BasisFunction.cc
${SOURCE_DIR}/Boundary.cc
${SOURCE_DIR}/CoarseningManager.cc
${SOURCE_DIR}/CoarseningManager1d.cc
${SOURCE_DIR}/CoarseningManager2d.cc
${SOURCE_DIR}/CoarseningManager3d.cc
${SOURCE_DIR}/DOFAdmin.cc
${SOURCE_DIR}/DOFMatrix.cc
${SOURCE_DIR}/Element.cc
${SOURCE_DIR}/ElInfo1d.cc
${SOURCE_DIR}/ElInfo2d.cc
${SOURCE_DIR}/ElInfo3d.cc
${SOURCE_DIR}/FiniteElemSpace.cc
${SOURCE_DIR}/FixVec.cc
${SOURCE_DIR}/Global.cc
${SOURCE_DIR}/Lagrange.cc
${SOURCE_DIR}/Line.cc
${SOURCE_DIR}/MacroElement.cc
${SOURCE_DIR}/MacroWriter.cc
${SOURCE_DIR}/Parameters.cc
${SOURCE_DIR}/Parametric.cc
${SOURCE_DIR}/Quadrature.cc
${SOURCE_DIR}/RCNeighbourList.cc
${SOURCE_DIR}/RefinementManager.cc
${SOURCE_DIR}/RefinementManager1d.cc
${SOURCE_DIR}/RefinementManager2d.cc
${SOURCE_DIR}/RefinementManager3d.cc
${SOURCE_DIR}/Tetrahedron.cc
${SOURCE_DIR}/Traverse.cc
${SOURCE_DIR}/TraverseParallel.cc
${SOURCE_DIR}/Triangle.cc
${SOURCE_DIR}/TecPlotWriter.cc
${SOURCE_DIR}/ValueWriter.cc
${SOURCE_DIR}/VtkWriter.cc
${SOURCE_DIR}/PngWriter.cc
${SOURCE_DIR}/PovrayWriter.cc
${SOURCE_DIR}/DataCollector.cc
${SOURCE_DIR}/ScalableQuadrature.cc
${SOURCE_DIR}/SubElInfo.cc
${SOURCE_DIR}/parallel/InteriorBoundary.cc
${SOURCE_DIR}/ElementDofIterator.cc
${SOURCE_DIR}/Debug.cc
${SOURCE_DIR}/time/RosenbrockAdaptInstationary.cc ${SOURCE_DIR}/time/RosenbrockStationary.cc
${SOURCE_DIR}/time/RosenbrockAdaptInstationary.cc
${SOURCE_DIR}/time/RosenbrockStationary.cc
${SOURCE_DIR}/time/RosenbrockMethod.cc
)
if(ENABLE_PARMETIS)
......
......@@ -140,6 +140,7 @@ PACKAGE_VERSION = @PACKAGE_VERSION@
PATH_SEPARATOR = @PATH_SEPARATOR@
PETSC_DIR = @PETSC_DIR@
RANLIB = @RANLIB@
SED = @SED@
SET_MAKE = @SET_MAKE@
SHELL = @SHELL@
STRIP = @STRIP@
......
......@@ -1578,10 +1578,27 @@ linux*)
# before this can be enabled.
hardcode_into_libs=yes
# find out which ABI we are using
libsuff=
case "$host_cpu" in
x86_64*|s390x*|powerpc64*)
echo '[#]line __oline__ "configure"' > conftest.$ac_ext
if AC_TRY_EVAL(ac_compile); then
case `/usr/bin/file conftest.$ac_objext` in
*64-bit*)
libsuff=64
sys_lib_search_path_spec="/lib${libsuff} /usr/lib${libsuff} /usr/local/lib${libsuff}"
;;
esac
fi
rm -rf conftest*
;;
esac
# Append ld.so.conf contents to the search path
if test -f /etc/ld.so.conf; then
lt_ld_extra=`awk '/^include / { system(sprintf("cd /etc; cat %s", \[$]2)); skip = 1; } { if (!skip) print \[$]0; skip = 0; }' < /etc/ld.so.conf | $SED -e 's/#.*//;s/[:, ]/ /g;s/=[^=]*$//;s/=[^= ]* / /g;/^$/d' | tr '\n' ' '`
sys_lib_dlsearch_path_spec="/lib /usr/lib $lt_ld_extra"
lt_ld_extra=`awk '/^include / { system(sprintf("cd /etc; cat %s 2>/dev/null", \[$]2)); skip = 1; } { if (!skip) print \[$]0; skip = 0; }' < /etc/ld.so.conf | $SED -e 's/#.*//;s/[:, ]/ /g;s/=[^=]*$//;s/=[^= ]* / /g;/^$/d' | tr '\n' ' '`
sys_lib_dlsearch_path_spec="/lib${libsuff} /usr/lib${libsuff} $lt_ld_extra"
fi
# We used to test for /lib/ld.so.1 and disable shared libraries on
......@@ -4288,6 +4305,9 @@ CC=$lt_[]_LT_AC_TAGVAR(compiler, $1)
# Is the compiler the GNU C compiler?
with_gcc=$_LT_AC_TAGVAR(GCC, $1)
gcc_dir=\`gcc -print-file-name=. | $SED 's,/\.$,,'\`
gcc_ver=\`gcc -dumpversion\`
# An ERE matcher.
EGREP=$lt_EGREP
......@@ -4421,11 +4441,11 @@ striplib=$lt_striplib
# Dependencies to place before the objects being linked to create a
# shared library.
predep_objects=$lt_[]_LT_AC_TAGVAR(predep_objects, $1)
predep_objects=\`echo $lt_[]_LT_AC_TAGVAR(predep_objects, $1) | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\`
# Dependencies to place after the objects being linked to create a
# shared library.
postdep_objects=$lt_[]_LT_AC_TAGVAR(postdep_objects, $1)
postdep_objects=\`echo $lt_[]_LT_AC_TAGVAR(postdep_objects, $1) | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\`
# Dependencies to place before the objects being linked to create a
# shared library.
......@@ -4437,7 +4457,7 @@ postdeps=$lt_[]_LT_AC_TAGVAR(postdeps, $1)
# The library search path used internally by the compiler when linking
# a shared library.
compiler_lib_search_path=$lt_[]_LT_AC_TAGVAR(compiler_lib_search_path, $1)
compiler_lib_search_path=\`echo $lt_[]_LT_AC_TAGVAR(compiler_lib_search_path, $1) | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\`
# Method to check whether dependent libraries are shared objects.
deplibs_check_method=$lt_deplibs_check_method
......@@ -4517,7 +4537,7 @@ variables_saved_for_relink="$variables_saved_for_relink"
link_all_deplibs=$_LT_AC_TAGVAR(link_all_deplibs, $1)
# Compile-time system search path for libraries
sys_lib_search_path_spec=$lt_sys_lib_search_path_spec
sys_lib_search_path_spec=\`echo $lt_sys_lib_search_path_spec | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\`
# Run-time system search path for libraries
sys_lib_dlsearch_path_spec=$lt_sys_lib_dlsearch_path_spec
......@@ -6353,6 +6373,7 @@ do
done
done
done
IFS=$as_save_IFS
lt_ac_max=0
lt_ac_count=0
# Add /usr/xpg4/bin/sed as it is typically found on Solaris
......@@ -6385,6 +6406,7 @@ for lt_ac_sed in $lt_ac_sed_list /usr/xpg4/bin/sed; do
done
])
SED=$lt_cv_path_SED
AC_SUBST([SED])
AC_MSG_RESULT([$SED])
])
......
......@@ -225,7 +225,8 @@ $(SOURCE_DIR)/ElementDofIteartor.h $(SOURCE_DIR)/ElementDofIterator.cc \
$(SOURCE_DIR)/parallel/InteriorBoundary.h $(SOURCE_DIR)/parallel/InteriorBoundary.cc \
$(SOURCE_DIR)/Debug.h $(SOURCE_DIR)/Debug.cc \
$(SOURCE_DIR)/time/RosenbrockAdaptInstationary.h $(SOURCE_DIR)/time/RosenbrockAdaptInstationary.cc \
$(SOURCE_DIR)/time/RosenbrockStationary.h $(SOURCE_DIR)/time/RosenbrockStationary.cc
$(SOURCE_DIR)/time/RosenbrockStationary.h $(SOURCE_DIR)/time/RosenbrockStationary.cc \
$(SOURCE_DIR)/time/RosenbrockMethod.h $(SOURCE_DIR)/time/RosenbrockMethod.cc
COMPOSITE_SOURCE_DIR = ../compositeFEM/src
......
......@@ -243,7 +243,9 @@ am__libamdis_la_SOURCES_DIST = $(SOURCE_DIR)/parallel/StdMpi.h \
$(SOURCE_DIR)/time/RosenbrockAdaptInstationary.h \
$(SOURCE_DIR)/time/RosenbrockAdaptInstationary.cc \
$(SOURCE_DIR)/time/RosenbrockStationary.h \
$(SOURCE_DIR)/time/RosenbrockStationary.cc
$(SOURCE_DIR)/time/RosenbrockStationary.cc \
$(SOURCE_DIR)/time/RosenbrockMethod.h \
$(SOURCE_DIR)/time/RosenbrockMethod.cc
@USE_PARALLEL_DOMAIN_AMDIS_TRUE@am__objects_1 = libamdis_la-StdMpi.lo \
@USE_PARALLEL_DOMAIN_AMDIS_TRUE@ libamdis_la-ParallelDomainBase.lo \
@USE_PARALLEL_DOMAIN_AMDIS_TRUE@ libamdis_la-ParallelDomainDbg.lo \
......@@ -312,7 +314,8 @@ am_libamdis_la_OBJECTS = $(am__objects_2) libamdis_la-DOFIndexed.lo \
libamdis_la-SubElInfo.lo libamdis_la-ElementDofIterator.lo \
libamdis_la-InteriorBoundary.lo libamdis_la-Debug.lo \
libamdis_la-RosenbrockAdaptInstationary.lo \
libamdis_la-RosenbrockStationary.lo
libamdis_la-RosenbrockStationary.lo \
libamdis_la-RosenbrockMethod.lo
libamdis_la_OBJECTS = $(am_libamdis_la_OBJECTS)
libcompositeFEM_la_LIBADD =
am_libcompositeFEM_la_OBJECTS = libcompositeFEM_la-CFE_Integration.lo \
......@@ -420,6 +423,7 @@ PACKAGE_VERSION = @PACKAGE_VERSION@
PATH_SEPARATOR = @PATH_SEPARATOR@
PETSC_DIR = @PETSC_DIR@
RANLIB = @RANLIB@
SED = @SED@
SET_MAKE = @SET_MAKE@
SHELL = @SHELL@
STRIP = @STRIP@
......@@ -657,7 +661,8 @@ $(SOURCE_DIR)/ElementDofIteartor.h $(SOURCE_DIR)/ElementDofIterator.cc \
$(SOURCE_DIR)/parallel/InteriorBoundary.h $(SOURCE_DIR)/parallel/InteriorBoundary.cc \
$(SOURCE_DIR)/Debug.h $(SOURCE_DIR)/Debug.cc \
$(SOURCE_DIR)/time/RosenbrockAdaptInstationary.h $(SOURCE_DIR)/time/RosenbrockAdaptInstationary.cc \
$(SOURCE_DIR)/time/RosenbrockStationary.h $(SOURCE_DIR)/time/RosenbrockStationary.cc
$(SOURCE_DIR)/time/RosenbrockStationary.h $(SOURCE_DIR)/time/RosenbrockStationary.cc \
$(SOURCE_DIR)/time/RosenbrockMethod.h $(SOURCE_DIR)/time/RosenbrockMethod.cc
COMPOSITE_SOURCE_DIR = ../compositeFEM/src
libcompositeFEM_la_CXXFLAGS = $(libamdis_la_CXXFLAGS)
......@@ -838,6 +843,7 @@ distclean-compile:
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libamdis_la-ResidualEstimator.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libamdis_la-RobinBC.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libamdis_la-RosenbrockAdaptInstationary.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libamdis_la-RosenbrockMethod.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libamdis_la-RosenbrockStationary.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libamdis_la-ScalableQuadrature.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libamdis_la-SecondOrderAssembler.Plo@am__quote@
......@@ -1638,6 +1644,13 @@ libamdis_la-RosenbrockStationary.lo: $(SOURCE_DIR)/time/RosenbrockStationary.cc
@AMDEP_TRUE@@am__fastdepCXX_FALSE@ DEPDIR=$(DEPDIR) $(CXXDEPMODE) $(depcomp) @AMDEPBACKSLASH@
@am__fastdepCXX_FALSE@ $(LIBTOOL) --tag=CXX --mode=compile $(CXX) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) $(libamdis_la_CXXFLAGS) $(CXXFLAGS) -c -o libamdis_la-RosenbrockStationary.lo `test -f '$(SOURCE_DIR)/time/RosenbrockStationary.cc' || echo '$(srcdir)/'`$(SOURCE_DIR)/time/RosenbrockStationary.cc
libamdis_la-RosenbrockMethod.lo: $(SOURCE_DIR)/time/RosenbrockMethod.cc
@am__fastdepCXX_TRUE@ if $(LIBTOOL) --tag=CXX --mode=compile $(CXX) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) $(libamdis_la_CXXFLAGS) $(CXXFLAGS) -MT libamdis_la-RosenbrockMethod.lo -MD -MP -MF "$(DEPDIR)/libamdis_la-RosenbrockMethod.Tpo" -c -o libamdis_la-RosenbrockMethod.lo `test -f '$(SOURCE_DIR)/time/RosenbrockMethod.cc' || echo '$(srcdir)/'`$(SOURCE_DIR)/time/RosenbrockMethod.cc; \
@am__fastdepCXX_TRUE@ then mv -f "$(DEPDIR)/libamdis_la-RosenbrockMethod.Tpo" "$(DEPDIR)/libamdis_la-RosenbrockMethod.Plo"; else rm -f "$(DEPDIR)/libamdis_la-RosenbrockMethod.Tpo"; exit 1; fi
@AMDEP_TRUE@@am__fastdepCXX_FALSE@ source='$(SOURCE_DIR)/time/RosenbrockMethod.cc' object='libamdis_la-RosenbrockMethod.lo' libtool=yes @AMDEPBACKSLASH@
@AMDEP_TRUE@@am__fastdepCXX_FALSE@ DEPDIR=$(DEPDIR) $(CXXDEPMODE) $(depcomp) @AMDEPBACKSLASH@
@am__fastdepCXX_FALSE@ $(LIBTOOL) --tag=CXX --mode=compile $(CXX) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) $(libamdis_la_CXXFLAGS) $(CXXFLAGS) -c -o libamdis_la-RosenbrockMethod.lo `test -f '$(SOURCE_DIR)/time/RosenbrockMethod.cc' || echo '$(srcdir)/'`$(SOURCE_DIR)/time/RosenbrockMethod.cc
libcompositeFEM_la-CFE_Integration.lo: $(COMPOSITE_SOURCE_DIR)/CFE_Integration.cc
@am__fastdepCXX_TRUE@ if $(LIBTOOL) --tag=CXX --mode=compile $(CXX) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) $(libcompositeFEM_la_CXXFLAGS) $(CXXFLAGS) -MT libcompositeFEM_la-CFE_Integration.lo -MD -MP -MF "$(DEPDIR)/libcompositeFEM_la-CFE_Integration.Tpo" -c -o libcompositeFEM_la-CFE_Integration.lo `test -f '$(COMPOSITE_SOURCE_DIR)/CFE_Integration.cc' || echo '$(srcdir)/'`$(COMPOSITE_SOURCE_DIR)/CFE_Integration.cc; \
@am__fastdepCXX_TRUE@ then mv -f "$(DEPDIR)/libcompositeFEM_la-CFE_Integration.Tpo" "$(DEPDIR)/libcompositeFEM_la-CFE_Integration.Plo"; else rm -f "$(DEPDIR)/libcompositeFEM_la-CFE_Integration.Tpo"; exit 1; fi
......
......@@ -462,7 +462,7 @@ ac_includes_default="\
# include <unistd.h>
#endif"
 
ac_subst_vars='SHELL PATH_SEPARATOR PACKAGE_NAME PACKAGE_TARNAME PACKAGE_VERSION PACKAGE_STRING PACKAGE_BUGREPORT exec_prefix prefix program_transform_name bindir sbindir libexecdir datadir sysconfdir sharedstatedir localstatedir libdir includedir oldincludedir infodir mandir build_alias host_alias target_alias DEFS ECHO_C ECHO_N ECHO_T LIBS INSTALL_PROGRAM INSTALL_SCRIPT INSTALL_DATA CYGPATH_W PACKAGE VERSION ACLOCAL AUTOCONF AUTOMAKE AUTOHEADER MAKEINFO install_sh STRIP ac_ct_STRIP INSTALL_STRIP_PROGRAM mkdir_p AWK SET_MAKE am__leading_dot AMTAR am__tar am__untar MAINTAINER_MODE_TRUE MAINTAINER_MODE_FALSE MAINT AMDIS_DEBUG_TRUE AMDIS_DEBUG_FALSE CXX CC AMDIS_INTEL_TRUE AMDIS_INTEL_FALSE AMDIS_OPENMP_TRUE AMDIS_OPENMP_FALSE OPENMP_FLAG MPI_DIR PETSC_DIR USE_PARALLEL_AMDIS_TRUE USE_PARALLEL_AMDIS_FALSE USE_PARALLEL_DOMAIN_AMDIS_TRUE USE_PARALLEL_DOMAIN_AMDIS_FALSE ENABLE_UMFPACK_TRUE ENABLE_UMFPACK_FALSE ENABLE_MKL_TRUE ENABLE_MKL_FALSE DUNE_DIR ENABLE_DUNE_TRUE ENABLE_DUNE_FALSE ENABLE_BOOST_TRUE ENABLE_BOOST_FALSE CFLAGS LDFLAGS CPPFLAGS ac_ct_CC EXEEXT OBJEXT DEPDIR am__include am__quote AMDEP_TRUE AMDEP_FALSE AMDEPBACKSLASH CCDEPMODE am__fastdepCC_TRUE am__fastdepCC_FALSE CXXFLAGS ac_ct_CXX CXXDEPMODE am__fastdepCXX_TRUE am__fastdepCXX_FALSE build build_cpu build_vendor build_os host host_cpu host_vendor host_os EGREP LN_S ECHO AR ac_ct_AR RANLIB ac_ct_RANLIB CPP CXXCPP F77 FFLAGS ac_ct_F77 LIBTOOL LIBOBJS LTLIBOBJS'
ac_subst_vars='SHELL PATH_SEPARATOR PACKAGE_NAME PACKAGE_TARNAME PACKAGE_VERSION PACKAGE_STRING PACKAGE_BUGREPORT exec_prefix prefix program_transform_name bindir sbindir libexecdir datadir sysconfdir sharedstatedir localstatedir libdir includedir oldincludedir infodir mandir build_alias host_alias target_alias DEFS ECHO_C ECHO_N ECHO_T LIBS INSTALL_PROGRAM INSTALL_SCRIPT INSTALL_DATA CYGPATH_W PACKAGE VERSION ACLOCAL AUTOCONF AUTOMAKE AUTOHEADER MAKEINFO install_sh STRIP ac_ct_STRIP INSTALL_STRIP_PROGRAM mkdir_p AWK SET_MAKE am__leading_dot AMTAR am__tar am__untar MAINTAINER_MODE_TRUE MAINTAINER_MODE_FALSE MAINT AMDIS_DEBUG_TRUE AMDIS_DEBUG_FALSE CXX CC AMDIS_INTEL_TRUE AMDIS_INTEL_FALSE AMDIS_OPENMP_TRUE AMDIS_OPENMP_FALSE OPENMP_FLAG MPI_DIR PETSC_DIR USE_PARALLEL_AMDIS_TRUE USE_PARALLEL_AMDIS_FALSE USE_PARALLEL_DOMAIN_AMDIS_TRUE USE_PARALLEL_DOMAIN_AMDIS_FALSE ENABLE_UMFPACK_TRUE ENABLE_UMFPACK_FALSE ENABLE_MKL_TRUE ENABLE_MKL_FALSE DUNE_DIR ENABLE_DUNE_TRUE ENABLE_DUNE_FALSE ENABLE_BOOST_TRUE ENABLE_BOOST_FALSE CFLAGS LDFLAGS CPPFLAGS ac_ct_CC EXEEXT OBJEXT DEPDIR am__include am__quote AMDEP_TRUE AMDEP_FALSE AMDEPBACKSLASH CCDEPMODE am__fastdepCC_TRUE am__fastdepCC_FALSE CXXFLAGS ac_ct_CXX CXXDEPMODE am__fastdepCXX_TRUE am__fastdepCXX_FALSE build build_cpu build_vendor build_os host host_cpu host_vendor host_os SED EGREP LN_S ECHO AR ac_ct_AR RANLIB ac_ct_RANLIB CPP CXXCPP F77 FFLAGS ac_ct_F77 LIBTOOL LIBOBJS LTLIBOBJS'
ac_subst_files=''
 
# Initialize some variables set by options.
......@@ -3967,6 +3967,7 @@ do
done
done
done
IFS=$as_save_IFS
lt_ac_max=0
lt_ac_count=0
# Add /usr/xpg4/bin/sed as it is typically found on Solaris
......@@ -4001,6 +4002,7 @@ done
fi
 
SED=$lt_cv_path_SED
echo "$as_me:$LINENO: result: $SED" >&5
echo "${ECHO_T}$SED" >&6
 
......@@ -4441,7 +4443,7 @@ ia64-*-hpux*)
;;
*-*-irix6*)
# Find out which ABI we are using.
echo '#line 4444 "configure"' > conftest.$ac_ext
echo '#line 4446 "configure"' > conftest.$ac_ext
if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
(eval $ac_compile) 2>&5
ac_status=$?
......@@ -5576,7 +5578,7 @@ fi
 
 
# Provide some information about the compiler.
echo "$as_me:5579:" \
echo "$as_me:5581:" \
"checking for Fortran 77 compiler version" >&5
ac_compiler=`set X $ac_compile; echo $2`
{ (eval echo "$as_me:$LINENO: \"$ac_compiler --version </dev/null >&5\"") >&5
......@@ -6639,11 +6641,11 @@ else
-e 's:.*FLAGS}\{0,1\} :&$lt_compiler_flag :; t' \
-e 's: [^ ]*conftest\.: $lt_compiler_flag&:; t' \
-e 's:$: $lt_compiler_flag:'`
(eval echo "\"\$as_me:6642: $lt_compile\"" >&5)
(eval echo "\"\$as_me:6644: $lt_compile\"" >&5)
(eval "$lt_compile" 2>conftest.err)
ac_status=$?
cat conftest.err >&5
echo "$as_me:6646: \$? = $ac_status" >&5
echo "$as_me:6648: \$? = $ac_status" >&5
if (exit $ac_status) && test -s "$ac_outfile"; then
# The compiler can only warn and ignore the option if not recognized
# So say no if there are warnings other than the usual output.
......@@ -6907,11 +6909,11 @@ else
-e 's:.*FLAGS}\{0,1\} :&$lt_compiler_flag :; t' \
-e 's: [^ ]*conftest\.: $lt_compiler_flag&:; t' \
-e 's:$: $lt_compiler_flag:'`
(eval echo "\"\$as_me:6910: $lt_compile\"" >&5)
(eval echo "\"\$as_me:6912: $lt_compile\"" >&5)
(eval "$lt_compile" 2>conftest.err)
ac_status=$?
cat conftest.err >&5
echo "$as_me:6914: \$? = $ac_status" >&5
echo "$as_me:6916: \$? = $ac_status" >&5
if (exit $ac_status) && test -s "$ac_outfile"; then
# The compiler can only warn and ignore the option if not recognized
# So say no if there are warnings other than the usual output.
......@@ -7011,11 +7013,11 @@ else
-e 's:.*FLAGS}\{0,1\} :&$lt_compiler_flag :; t' \
-e 's: [^ ]*conftest\.: $lt_compiler_flag&:; t' \
-e 's:$: $lt_compiler_flag:'`
(eval echo "\"\$as_me:7014: $lt_compile\"" >&5)
(eval echo "\"\$as_me:7016: $lt_compile\"" >&5)
(eval "$lt_compile" 2>out/conftest.err)
ac_status=$?
cat out/conftest.err >&5
echo "$as_me:7018: \$? = $ac_status" >&5
echo "$as_me:7020: \$? = $ac_status" >&5
if (exit $ac_status) && test -s out/conftest2.$ac_objext
then
# The compiler can only warn and ignore the option if not recognized
......@@ -8476,10 +8478,31 @@ linux*)
# before this can be enabled.
hardcode_into_libs=yes
 
# find out which ABI we are using
libsuff=
case "$host_cpu" in
x86_64*|s390x*|powerpc64*)
echo '#line 8485 "configure"' > conftest.$ac_ext
if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
(eval $ac_compile) 2>&5
ac_status=$?
echo "$as_me:$LINENO: \$? = $ac_status" >&5
(exit $ac_status); }; then
case `/usr/bin/file conftest.$ac_objext` in
*64-bit*)
libsuff=64
sys_lib_search_path_spec="/lib${libsuff} /usr/lib${libsuff} /usr/local/lib${libsuff}"
;;
esac
fi
rm -rf conftest*
;;
esac
# Append ld.so.conf contents to the search path
if test -f /etc/ld.so.conf; then
lt_ld_extra=`awk '/^include / { system(sprintf("cd /etc; cat %s", \$2)); skip = 1; } { if (!skip) print \$0; skip = 0; }' < /etc/ld.so.conf | $SED -e 's/#.*//;s/[:, ]/ /g;s/=[^=]*$//;s/=[^= ]* / /g;/^$/d' | tr '\n' ' '`
sys_lib_dlsearch_path_spec="/lib /usr/lib $lt_ld_extra"
lt_ld_extra=`awk '/^include / { system(sprintf("cd /etc; cat %s 2>/dev/null", \$2)); skip = 1; } { if (!skip) print \$0; skip = 0; }' < /etc/ld.so.conf | $SED -e 's/#.*//;s/[:, ]/ /g;s/=[^=]*$//;s/=[^= ]* / /g;/^$/d' | tr '\n' ' '`
sys_lib_dlsearch_path_spec="/lib${libsuff} /usr/lib${libsuff} $lt_ld_extra"
fi
 
# We used to test for /lib/ld.so.1 and disable shared libraries on
......@@ -9356,7 +9379,7 @@ else
lt_dlunknown=0; lt_dlno_uscore=1; lt_dlneed_uscore=2
lt_status=$lt_dlunknown
cat > conftest.$ac_ext <<EOF
#line 9359 "configure"
#line 9382 "configure"
#include "confdefs.h"
 
#if HAVE_DLFCN_H
......@@ -9456,7 +9479,7 @@ else
lt_dlunknown=0; lt_dlno_uscore=1; lt_dlneed_uscore=2
lt_status=$lt_dlunknown
cat > conftest.$ac_ext <<EOF
#line 9459 "configure"
#line 9482 "configure"
#include "confdefs.h"
 
#if HAVE_DLFCN_H
......@@ -9787,6 +9810,9 @@ CC=$lt_compiler
# Is the compiler the GNU C compiler?
with_gcc=$GCC
 
gcc_dir=\`gcc -print-file-name=. | $SED 's,/\.$,,'\`
gcc_ver=\`gcc -dumpversion\`
# An ERE matcher.
EGREP=$lt_EGREP
 
......@@ -9920,11 +9946,11 @@ striplib=$lt_striplib
 
# Dependencies to place before the objects being linked to create a
# shared library.
predep_objects=$lt_predep_objects
predep_objects=\`echo $lt_predep_objects | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\`
 
# Dependencies to place after the objects being linked to create a
# shared library.
postdep_objects=$lt_postdep_objects
postdep_objects=\`echo $lt_postdep_objects | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\`
 
# Dependencies to place before the objects being linked to create a
# shared library.
......@@ -9936,7 +9962,7 @@ postdeps=$lt_postdeps
 
# The library search path used internally by the compiler when linking
# a shared library.
compiler_lib_search_path=$lt_compiler_lib_search_path
compiler_lib_search_path=\`echo $lt_compiler_lib_search_path | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\`
 
# Method to check whether dependent libraries are shared objects.
deplibs_check_method=$lt_deplibs_check_method
......@@ -10016,7 +10042,7 @@ variables_saved_for_relink="$variables_saved_for_relink"
link_all_deplibs=$link_all_deplibs
 
# Compile-time system search path for libraries
sys_lib_search_path_spec=$lt_sys_lib_search_path_spec
sys_lib_search_path_spec=\`echo $lt_sys_lib_search_path_spec | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\`
 
# Run-time system search path for libraries
sys_lib_dlsearch_path_spec=$lt_sys_lib_dlsearch_path_spec
......@@ -11796,11 +11822,11 @@ else
-e 's:.*FLAGS}\{0,1\} :&$lt_compiler_flag :; t' \
-e 's: [^ ]*conftest\.: $lt_compiler_flag&:; t' \
-e 's:$: $lt_compiler_flag:'`
(eval echo "\"\$as_me:11799: $lt_compile\"" >&5)
(eval echo "\"\$as_me:11825: $lt_compile\"" >&5)
(eval "$lt_compile" 2>conftest.err)
ac_status=$?
cat conftest.err >&5
echo "$as_me:11803: \$? = $ac_status" >&5
echo "$as_me:11829: \$? = $ac_status" >&5
if (exit $ac_status) && test -s "$ac_outfile"; then
# The compiler can only warn and ignore the option if not recognized
# So say no if there are warnings other than the usual output.
......@@ -11900,11 +11926,11 @@ else
-e 's:.*FLAGS}\{0,1\} :&$lt_compiler_flag :; t' \
-e 's: [^ ]*conftest\.: $lt_compiler_flag&:; t' \
-e 's:$: $lt_compiler_flag:'`
(eval echo "\"\$as_me:11903: $lt_compile\"" >&5)
(eval echo "\"\$as_me:11929: $lt_compile\"" >&5)
(eval "$lt_compile" 2>out/conftest.err)
ac_status=$?
cat out/conftest.err >&5
echo "$as_me:11907: \$? = $ac_status" >&5
echo "$as_me:11933: \$? = $ac_status" >&5
if (exit $ac_status) && test -s out/conftest2.$ac_objext
then
# The compiler can only warn and ignore the option if not recognized
......@@ -12432,10 +12458,31 @@ linux*)
# before this can be enabled.
hardcode_into_libs=yes
 
# find out which ABI we are using
libsuff=
case "$host_cpu" in
x86_64*|s390x*|powerpc64*)
echo '#line 12465 "configure"' > conftest.$ac_ext
if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
(eval $ac_compile) 2>&5
ac_status=$?
echo "$as_me:$LINENO: \$? = $ac_status" >&5
(exit $ac_status); }; then
case `/usr/bin/file conftest.$ac_objext` in
*64-bit*)
libsuff=64
sys_lib_search_path_spec="/lib${libsuff} /usr/lib${libsuff} /usr/local/lib${libsuff}"
;;
esac
fi
rm -rf conftest*
;;
esac
# Append ld.so.conf contents to the search path
if test -f /etc/ld.so.conf; then
lt_ld_extra=`awk '/^include / { system(sprintf("cd /etc; cat %s", \$2)); skip = 1; } { if (!skip) print \$0; skip = 0; }' < /etc/ld.so.conf | $SED -e 's/#.*//;s/[:, ]/ /g;s/=[^=]*$//;s/=[^= ]* / /g;/^$/d' | tr '\n' ' '`
sys_lib_dlsearch_path_spec="/lib /usr/lib $lt_ld_extra"
lt_ld_extra=`awk '/^include / { system(sprintf("cd /etc; cat %s 2>/dev/null", \$2)); skip = 1; } { if (!skip) print \$0; skip = 0; }' < /etc/ld.so.conf | $SED -e 's/#.*//;s/[:, ]/ /g;s/=[^=]*$//;s/=[^= ]* / /g;/^$/d' | tr '\n' ' '`
sys_lib_dlsearch_path_spec="/lib${libsuff} /usr/lib${libsuff} $lt_ld_extra"
fi
 
# We used to test for /lib/ld.so.1 and disable shared libraries on
......@@ -12819,6 +12866,9 @@ CC=$lt_compiler_CXX
# Is the compiler the GNU C compiler?
with_gcc=$GCC_CXX
 
gcc_dir=\`gcc -print-file-name=. | $SED 's,/\.$,,'\`
gcc_ver=\`gcc -dumpversion\`
# An ERE matcher.
EGREP=$lt_EGREP
 
......@@ -12952,11 +13002,11 @@ striplib=$lt_striplib
 
# Dependencies to place before the objects being linked to create a
# shared library.
predep_objects=$lt_predep_objects_CXX
predep_objects=\`echo $lt_predep_objects_CXX | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\`
 
# Dependencies to place after the objects being linked to create a
# shared library.
postdep_objects=$lt_postdep_objects_CXX
postdep_objects=\`echo $lt_postdep_objects_CXX | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\`
 
# Dependencies to place before the objects being linked to create a
# shared library.
......@@ -12968,7 +13018,7 @@ postdeps=$lt_postdeps_CXX
 
# The library search path used internally by the compiler when linking
# a shared library.
compiler_lib_search_path=$lt_compiler_lib_search_path_CXX
compiler_lib_search_path=\`echo $lt_compiler_lib_search_path_CXX | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\`
 
# Method to check whether dependent libraries are shared objects.
deplibs_check_method=$lt_deplibs_check_method
......@@ -13048,7 +13098,7 @@ variables_saved_for_relink="$variables_saved_for_relink"
link_all_deplibs=$link_all_deplibs_CXX
 
# Compile-time system search path for libraries
sys_lib_search_path_spec=$lt_sys_lib_search_path_spec
sys_lib_search_path_spec=\`echo $lt_sys_lib_search_path_spec | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\`
 
# Run-time system search path for libraries
sys_lib_dlsearch_path_spec=$lt_sys_lib_dlsearch_path_spec
......@@ -13470,11 +13520,11 @@ else
-e 's:.*FLAGS}\{0,1\} :&$lt_compiler_flag :; t' \
-e 's: [^ ]*conftest\.: $lt_compiler_flag&:; t' \
-e 's:$: $lt_compiler_flag:'`
(eval echo "\"\$as_me:13473: $lt_compile\"" >&5)
(eval echo "\"\$as_me:13523: $lt_compile\"" >&5)
(eval "$lt_compile" 2>conftest.err)
ac_status=$?
cat conftest.err >&5
echo "$as_me:13477: \$? = $ac_status" >&5
echo "$as_me:13527: \$? = $ac_status" >&5
if (exit $ac_status) && test -s "$ac_outfile"; then
# The compiler can only warn and ignore the option if not recognized
# So say no if there are warnings other than the usual output.
......@@ -13574,11 +13624,11 @@ else
-e 's:.*FLAGS}\{0,1\} :&$lt_compiler_flag :; t' \
-e 's: [^ ]*conftest\.: $lt_compiler_flag&:; t' \
-e 's:$: $lt_compiler_flag:'`
(eval echo "\"\$as_me:13577: $lt_compile\"" >&5)
(eval echo "\"\$as_me:13627: $lt_compile\"" >&5)
(eval "$lt_compile" 2>out/conftest.err)
ac_status=$?
cat out/conftest.err >&5
echo "$as_me:13581: \$? = $ac_status" >&5
echo "$as_me:13631: \$? = $ac_status" >&5
if (exit $ac_status) && test -s out/conftest2.$ac_objext
then
# The compiler can only warn and ignore the option if not recognized
......@@ -15019,10 +15069,31 @@ linux*)
# before this can be enabled.
hardcode_into_libs=yes
 
# find out which ABI we are using
libsuff=
case "$host_cpu" in
x86_64*|s390x*|powerpc64*)
echo '#line 15076 "configure"' > conftest.$ac_ext
if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
(eval $ac_compile) 2>&5
ac_status=$?
echo "$as_me:$LINENO: \$? = $ac_status" >&5
(exit $ac_status); }; then
case `/usr/bin/file conftest.$ac_objext` in
*64-bit*)
libsuff=64
sys_lib_search_path_spec="/lib${libsuff} /usr/lib${libsuff} /usr/local/lib${libsuff}"
;;
esac
fi
rm -rf conftest*
;;
esac
# Append ld.so.conf contents to the search path
if test -f /etc/ld.so.conf; then
lt_ld_extra=`awk '/^include / { system(sprintf("cd /etc; cat %s", \$2)); skip = 1; } { if (!skip) print \$0; skip = 0; }' < /etc/ld.so.conf | $SED -e 's/#.*//;s/[:, ]/ /g;s/=[^=]*$//;s/=[^= ]* / /g;/^$/d' | tr '\n' ' '`
sys_lib_dlsearch_path_spec="/lib /usr/lib $lt_ld_extra"
lt_ld_extra=`awk '/^include / { system(sprintf("cd /etc; cat %s 2>/dev/null", \$2)); skip = 1; } { if (!skip) print \$0; skip = 0; }' < /etc/ld.so.conf | $SED -e 's/#.*//;s/[:, ]/ /g;s/=[^=]*$//;s/=[^= ]* / /g;/^$/d' | tr '\n' ' '`
sys_lib_dlsearch_path_spec="/lib${libsuff} /usr/lib${libsuff} $lt_ld_extra"
fi
 
# We used to test for /lib/ld.so.1 and disable shared libraries on
......@@ -15406,6 +15477,9 @@ CC=$lt_compiler_F77
# Is the compiler the GNU C compiler?
with_gcc=$GCC_F77
 
gcc_dir=\`gcc -print-file-name=. | $SED 's,/\.$,,'\`
gcc_ver=\`gcc -dumpversion\`
# An ERE matcher.