amdis-core merge requestshttps://gitlab.math.tu-dresden.de/amdis/amdis-core/-/merge_requests2020-02-07T14:49:28Zhttps://gitlab.math.tu-dresden.de/amdis/amdis-core/-/merge_requests/157generator function writer2020-02-07T14:49:28ZPraetorius, Simongenerator function writerAdd generator functions for BackupWriter and GMshWriterAdd generator functions for BackupWriter and GMshWriterhttps://gitlab.math.tu-dresden.de/amdis/amdis-core/-/merge_requests/156corrected creator for sequential istl communication2020-02-03T10:36:41ZPraetorius, Simoncorrected creator for sequential istl communicationhttps://gitlab.math.tu-dresden.de/amdis/amdis-core/-/merge_requests/155Restructure and cleanup the amdis source directory2020-02-09T00:13:57ZPraetorius, SimonRestructure and cleanup the amdis source directoryThis MR makes one big change: rename `src/amdis/ -> amdis/`. This pattern is followed by dune and boost and other libraries.This MR makes one big change: rename `src/amdis/ -> amdis/`. This pattern is followed by dune and boost and other libraries.https://gitlab.math.tu-dresden.de/amdis/amdis-core/-/merge_requests/154Add unused examples to CMakeLists2020-02-03T09:47:02ZMüller, FelixAdd unused examples to CMakeLists- Add the examples `neumann.cc`, `periodic.cc`, `traversal.cc`, `treecontainer.cc` to `CMakeLists.txt` to prevent bitrot
- Fix some errors with the examples above
- Create `examples/output/` and copy `examples/macro/` to build directory ...- Add the examples `neumann.cc`, `periodic.cc`, `traversal.cc`, `treecontainer.cc` to `CMakeLists.txt` to prevent bitrot
- Fix some errors with the examples above
- Create `examples/output/` and copy `examples/macro/` to build directory via cmakehttps://gitlab.math.tu-dresden.de/amdis/amdis-core/-/merge_requests/153Bug in setDatatransfer to DataTransferOperation2020-02-02T11:30:48ZPraetorius, SimonBug in setDatatransfer to DataTransferOperationhttps://gitlab.math.tu-dresden.de/amdis/amdis-core/-/merge_requests/152Add overload for LagrangeBasis with single node2020-01-31T14:46:46ZMüller, FelixAdd overload for LagrangeBasis with single nodeThis MR provides an overload to `LagrangePreBasisCreatorImpl` to return a single-node prebasis `lagrange<k>()` when using `LagrangeBasis<Grid, k>`.This MR provides an overload to `LagrangePreBasisCreatorImpl` to return a single-node prebasis `lagrange<k>()` when using `LagrangeBasis<Grid, k>`.https://gitlab.math.tu-dresden.de/amdis/amdis-core/-/merge_requests/151workaround for communicators in blocked bases, use SequentialCommunication if...2020-01-31T16:35:53ZPraetorius, Simonworkaround for communicators in blocked bases, use SequentialCommunication if not flat MultiIndexThis workaround is implemented to at least allow that blocked bases compile with `ParallelGlobalBasis`. By default, if the basis is blocked, i.e. the MultiIndex is not a flat MultiIndex, the basis uses a `SequentialCommunication` instead...This workaround is implemented to at least allow that blocked bases compile with `ParallelGlobalBasis`. By default, if the basis is blocked, i.e. the MultiIndex is not a flat MultiIndex, the basis uses a `SequentialCommunication` instead of a backend communication object.https://gitlab.math.tu-dresden.de/amdis/amdis-core/-/merge_requests/150initialize solver preconditioner correctly2020-01-31T18:16:53ZPraetorius, Simoninitialize solver preconditioner correctlyhttps://gitlab.math.tu-dresden.de/amdis/amdis-core/-/merge_requests/149allow to pass bool parameter to stokes operator2020-02-03T09:47:54ZPraetorius, Simonallow to pass bool parameter to stokes operatorhttps://gitlab.math.tu-dresden.de/amdis/amdis-core/-/merge_requests/148mtl krylov runner create precon2020-01-31T17:42:05ZPraetorius, Simonmtl krylov runner create preconCreate the preconditioner in the `runner::init()` method, to allow to register preconditioners even after runner is constructed.Create the preconditioner in the `runner::init()` method, to allow to register preconditioners even after runner is constructed.https://gitlab.math.tu-dresden.de/amdis/amdis-core/-/merge_requests/147Wrap DistributedCommunication::RemoteIndices in unique_ptr to fix move issue ...2020-01-24T12:58:37ZMüller, FelixWrap DistributedCommunication::RemoteIndices in unique_ptr to fix move issue in c++14Due to missing copy elision in c++14 the PETSc Comm object `DistributedCommunication` is required to have a copy or move constructor in the statement (`ParallelGlobalBasis.hpp:89`)
```cpp
, comm_(CommunicationCreator<Comm>::create(st...Due to missing copy elision in c++14 the PETSc Comm object `DistributedCommunication` is required to have a copy or move constructor in the statement (`ParallelGlobalBasis.hpp:89`)
```cpp
, comm_(CommunicationCreator<Comm>::create(static_cast<Super const&>(*this), name + "->solver"))
```
Since the member `Dune::RemoteIndices` declares a private copy and no move constructor we need to wrap it into a `unique_ptr` to provide move semantics.https://gitlab.math.tu-dresden.de/amdis/amdis-core/-/merge_requests/146moved the sparsity pattern update method to the bilinear form2020-01-10T19:17:32ZPraetorius, Simonmoved the sparsity pattern update method to the bilinear formhttps://gitlab.math.tu-dresden.de/amdis/amdis-core/-/merge_requests/145Added missing include2020-01-07T18:04:06ZMüller, FelixAdded missing includeAdded missing include for `Dune::range`Added missing include for `Dune::range`https://gitlab.math.tu-dresden.de/amdis/amdis-core/-/merge_requests/144Add a destructor to Notifier to prevent Segfault w/o extending the Lifetime o...2020-01-10T18:19:15ZMüller, FelixAdd a destructor to Notifier to prevent Segfault w/o extending the Lifetime of Objects via shared_ptrAlso extended the testsAlso extended the testshttps://gitlab.math.tu-dresden.de/amdis/amdis-core/-/merge_requests/143remove comm from solver2020-01-20T15:23:25ZPraetorius, Simonremove comm from solverhttps://gitlab.math.tu-dresden.de/amdis/amdis-core/-/merge_requests/142cleanup for petscsolver2020-01-03T14:25:46ZPraetorius, Simoncleanup for petscsolverhttps://gitlab.math.tu-dresden.de/amdis/amdis-core/-/merge_requests/141cmake have package rename2019-12-28T14:52:00ZPraetorius, Simoncmake have package renamehttps://gitlab.math.tu-dresden.de/amdis/amdis-core/-/merge_requests/140communicator construction2019-12-28T13:51:45ZPraetorius, Simoncommunicator constructionreduce multiple initilizations of preBasisreduce multiple initilizations of preBasishttps://gitlab.math.tu-dresden.de/amdis/amdis-core/-/merge_requests/139cmake have package rename2019-12-28T11:15:26ZPraetorius, Simoncmake have package renamerenamed `HAVE_XXX` into `AMDIS_HAS_XXX` and updated Hypre cmake configurationrenamed `HAVE_XXX` into `AMDIS_HAS_XXX` and updated Hypre cmake configurationhttps://gitlab.math.tu-dresden.de/amdis/amdis-core/-/merge_requests/138the install script now compiles all dune modules and creates an opts file2019-12-28T11:13:43ZPraetorius, Simonthe install script now compiles all dune modules and creates an opts file