Skip to content
GitLab
Projects
Groups
Snippets
/
Help
Help
Support
Community forum
Keyboard shortcuts
?
Submit feedback
Contribute to GitLab
Sign in
Toggle navigation
Menu
Open sidebar
Backofen, Rainer
amdis
Commits
0c596622
Commit
0c596622
authored
Mar 04, 2011
by
Naumann, Andreas
Browse files
zoltan and goto-blas for AMDiS module on deimos
parent
fccd494d
Changes
3
Hide whitespace changes
Inline
Side-by-side
AMDiS/AMDiSConfig.cmake.in
View file @
0c596622
...
@@ -55,6 +55,7 @@ if(Boost_FOUND)
...
@@ -55,6 +55,7 @@ if(Boost_FOUND)
endif(Boost_FOUND)
endif(Boost_FOUND)
set(AMDiS_NEED_PARMETIS @ENABLE_PARMETIS@)
set(AMDiS_NEED_PARMETIS @ENABLE_PARMETIS@)
set(AMDiS_NEED_ZOLTAN @ENABLE_ZOLTAN@)
set(AMDiS_HAS_PARALLEL_DOMAIN @ENABLE_PARALLEL_DOMAIN@)
set(AMDiS_HAS_PARALLEL_DOMAIN @ENABLE_PARALLEL_DOMAIN@)
set(AMDiS_NEED_UMFPACK @ENABLE_UMFPACK@)
set(AMDiS_NEED_UMFPACK @ENABLE_UMFPACK@)
set(AMDiS_NEED_MKL @ENABLE_MKL@)
set(AMDiS_NEED_MKL @ENABLE_MKL@)
...
@@ -62,18 +63,13 @@ set(AMDiS_USE_FILE ${AMDiS_DIR}/AMDiSUse.cmake)
...
@@ -62,18 +63,13 @@ set(AMDiS_USE_FILE ${AMDiS_DIR}/AMDiSUse.cmake)
set(AMDiS_COMPILEFLAGS "@COMPILEFLAGS@")
set(AMDiS_COMPILEFLAGS "@COMPILEFLAGS@")
if(AMDiS_NEED_UMFPACK)
if(AMDiS_NEED_UMFPACK)
set(BLAS_LIBRARY_DIR "" CACHE PATH "the blas library directory")
set(BLAS_LIBRARY "blas" CACHE FILEPATH "the blas library")
if(NOT BLAS_LIBRARY)
find_library(_BLAS_LIB NAMES "${BLAS_LIBRARY}" "goto" PATHS ${BLAS_LIBRARY_DIR})
set(BLAS_LIBRARY "blas" CACHE STRING "the blas library")
message("blaslibrary: ${_BLAS_LIB}")
endif(NOT BLAS_LIBRARY)
find_library(_BLAS_LIB ${BLAS_LIBRARY} PATHS ${BLAS_LIBRARY_DIR})
if(NOT _BLAS_LIB)
if(NOT _BLAS_LIB)
if(EXISTS ${BLAS_LIBRARY})
message(ERROR " could not find the blas library. please set the variable BLAS_LIBRARY to the blas library with full path")
set(_BLAS_LIB ${BLAS_LIBRARY})
else()
endif()
set(BLAS_LIBRARY "${_BLAS_LIB}")
endif(NOT _BLAS_LIB)
if(NOT _BLAS_LIB)
message(ERROR "could not find the blas library. please set the variables BLAS_LIBRARY_DIR and BLAS_LIBRARY")
endif()
endif()
list(APPEND AMDiS_LIBRARIES ${AMDiS_LIBRARY_DIR}/umfpack/libumfpack.a ${AMDiS_LIBRARY_DIR}/amd/libamd.a ${BLAS_LIBRARY})
list(APPEND AMDiS_LIBRARIES ${AMDiS_LIBRARY_DIR}/umfpack/libumfpack.a ${AMDiS_LIBRARY_DIR}/amd/libamd.a ${BLAS_LIBRARY})
list(APPEND AMDiS_LIBRARY_DIRS ${AMDiS_LIBRARY_DIR}/umfpack ${AMDiS_LIBRARY_DIR}/amd ${BLAS_LIBRARY_DIR})
list(APPEND AMDiS_LIBRARY_DIRS ${AMDiS_LIBRARY_DIR}/umfpack ${AMDiS_LIBRARY_DIR}/amd ${BLAS_LIBRARY_DIR})
...
@@ -97,6 +93,10 @@ if( AMDiS_NEED_PARMETIS )
...
@@ -97,6 +93,10 @@ if( AMDiS_NEED_PARMETIS )
list(APPEND AMDiS_LIBRARIES ${AMDiS_LIBRARY_DIR}/parmetis/libparmetis.a ${AMDiS_LIBRARY_DIR}/parmetis/libmetis.a)
list(APPEND AMDiS_LIBRARIES ${AMDiS_LIBRARY_DIR}/parmetis/libparmetis.a ${AMDiS_LIBRARY_DIR}/parmetis/libmetis.a)
endif()
endif()
if( AMDiS_NEED_ZOLTAN )
find_library(ZOLTAN_LIB zoltan DOC "full path to the zoltan library")
list(APPEND AMDiS_LIBRARIES ${ZOLTAN_LIB})
endif()
if(${AMDiS_FIND_COMPONENTS} MATCHES parmetis AND NOT AMDiS_NEED_PARMETIS)
if(${AMDiS_FIND_COMPONENTS} MATCHES parmetis AND NOT AMDiS_NEED_PARMETIS)
message(SEND_ERROR "amdis was not compiled with parmetis")
message(SEND_ERROR "amdis was not compiled with parmetis")
endif()
endif()
AMDiS/AMDiSUse.cmake
View file @
0c596622
...
@@ -5,9 +5,12 @@ if(AMDiS_HAS_PARALLEL_DOMAIN)
...
@@ -5,9 +5,12 @@ if(AMDiS_HAS_PARALLEL_DOMAIN)
else
()
else
()
find_package
(
MPI REQUIRED
)
find_package
(
MPI REQUIRED
)
if
(
MPI_FOUND
)
if
(
MPI_FOUND
)
INCLUDE
(
CMakeForceCompiler
)
# INCLUDE(CMakeForceCompiler)
CMAKE_FORCE_CXX_COMPILER
(
mpicxx
"The MPI C++ compiler"
)
# CMAKE_FORCE_CXX_COMPILER(mpicxx "The MPI C++ compiler")
CMAKE_FORCE_C_COMPILER
(
mpicc
"The MPI C Compiler"
)
# CMAKE_FORCE_C_COMPILER(mpicc "The MPI C Compiler")
list
(
APPEND AMDiS_LIBRARIES
${
MPI_LIBRARIES
}
)
list
(
APPEND AMDiS_COMPILEFLAGS
${
MPI_COMPILE_FLAGS
}
)
list
(
APPEND AMDiS_INCLUDE_DIRS
${
MPI_INCLUDE_PATH
}
)
endif
(
MPI_FOUND
)
endif
(
MPI_FOUND
)
set
(
CMAKE_MODULE_PATH
${
CMAKE_MODULE_PATH
}
${
AMDiS_DIR
}
)
set
(
CMAKE_MODULE_PATH
${
CMAKE_MODULE_PATH
}
${
AMDiS_DIR
}
)
set
(
PETSC_EXECUTABLE_RUNS ON
)
set
(
PETSC_EXECUTABLE_RUNS ON
)
...
...
AMDiS/CMakeLists.txt
View file @
0c596622
...
@@ -156,9 +156,13 @@ SET(AMDIS_SRC ${SOURCE_DIR}/DOFIndexed.cc
...
@@ -156,9 +156,13 @@ SET(AMDIS_SRC ${SOURCE_DIR}/DOFIndexed.cc
if
(
ENABLE_PARALLEL_DOMAIN
)
if
(
ENABLE_PARALLEL_DOMAIN
)
find_package
(
MPI REQUIRED
)
find_package
(
MPI REQUIRED
)
INCLUDE
(
CMakeForceCompiler
)
if
(
MPI_FOUND
)
CMAKE_FORCE_C_COMPILER
(
mpicc
"MPI C compiler"
)
#INCLUDE (CMakeForceCompiler)
CMAKE_FORCE_CXX_COMPILER
(
mpiCC
"MPI C++ compiler"
)
#CMAKE_FORCE_C_COMPILER(mpicc "MPI C compiler")
#CMAKE_FORCE_CXX_COMPILER(mpiCC "MPI C++ compiler")
list
(
APPEND AMDiS_COMPILEFLAGS
${
MPI_COMPILE_FLAGS
}
)
include_directories
(
${
MPI_INCLUDE_PATH
}
)
endif
(
MPI_FOUND
)
add_custom_target
(
parmetis-lib ALL
add_custom_target
(
parmetis-lib ALL
make
make
...
@@ -171,6 +175,13 @@ if(ENABLE_PARALLEL_DOMAIN)
...
@@ -171,6 +175,13 @@ if(ENABLE_PARALLEL_DOMAIN)
DESTINATION lib/amdis/parmetis
DESTINATION lib/amdis/parmetis
)
)
set
(
ENABLE_PARMETIS ON
)
set
(
ENABLE_PARMETIS ON
)
find_file
(
ZOLTAN_HEADER_DIR
"zoltan_cpp.h"
)
if
(
ZOLTAN_HEADER_DIR
)
get_filename_component
(
ZOLTAN_HEADER_DIR
"
${
ZOLTAN_HEADER_DIR
}
"
PATH CACHE
)
include_directories
(
${
ZOLTAN_HEADER_DIR
}
)
else
()
message
(
FATAL_ERROR
"could not find zoltan."
)
endif
(
ZOLTAN_HEADER_DIR
)
set
(
CMAKE_MODULE_PATH
"
${
CMAKE_MODULE_PATH
}
;/usr/share/cmake-2.8/Modules/;
${
CMAKE_SOURCE_DIR
}
/"
)
set
(
CMAKE_MODULE_PATH
"
${
CMAKE_MODULE_PATH
}
;/usr/share/cmake-2.8/Modules/;
${
CMAKE_SOURCE_DIR
}
/"
)
set
(
PETSC_EXECUTABLE_RUNS ON
)
set
(
PETSC_EXECUTABLE_RUNS ON
)
find_package
(
PETSc REQUIRED
)
find_package
(
PETSc REQUIRED
)
...
@@ -185,7 +196,8 @@ if(ENABLE_PARALLEL_DOMAIN)
...
@@ -185,7 +196,8 @@ if(ENABLE_PARALLEL_DOMAIN)
${
SOURCE_DIR
}
/parallel/MpiHelper.cc
${
SOURCE_DIR
}
/parallel/MpiHelper.cc
${
SOURCE_DIR
}
/parallel/ElementObjectData.cc
${
SOURCE_DIR
}
/parallel/ElementObjectData.cc
${
SOURCE_DIR
}
/parallel/ParallelProblemStatBase.cc
${
SOURCE_DIR
}
/parallel/ParallelProblemStatBase.cc
${
SOURCE_DIR
}
/parallel/PetscSolver.cc
)
${
SOURCE_DIR
}
/parallel/PetscSolver.cc
${
SOURCE_DIR
}
/parallel/ZoltanPartitioner.cc
)
SET
(
COMPILEFLAGS
"
${
COMPILEFLAGS
}
-DHAVE_PARALLEL_DOMAIN_AMDIS=1"
)
SET
(
COMPILEFLAGS
"
${
COMPILEFLAGS
}
-DHAVE_PARALLEL_DOMAIN_AMDIS=1"
)
INSTALL
(
FILES ResolveCompilerPaths.cmake FindPackageMultipass.cmake FindPETSc.cmake
INSTALL
(
FILES ResolveCompilerPaths.cmake FindPackageMultipass.cmake FindPETSc.cmake
DESTINATION share/amdis/
)
DESTINATION share/amdis/
)
...
@@ -196,7 +208,7 @@ if(ENABLE_OPENMP)
...
@@ -196,7 +208,7 @@ if(ENABLE_OPENMP)
if
(
OPENMP_FOUND
)
if
(
OPENMP_FOUND
)
SET
(
COMPILEFLAGS
"
${
COMPILEFLAGS
}
${
OpenMP_CXX_FLAGS
}
"
)
SET
(
COMPILEFLAGS
"
${
COMPILEFLAGS
}
${
OpenMP_CXX_FLAGS
}
"
)
else
()
else
()
message
(
WARNING
"your compiler seems support openmp"
)
message
(
WARNING
"your compiler seems
not
support
ing
openmp"
)
endif
()
endif
()
endif
(
ENABLE_OPENMP
)
endif
(
ENABLE_OPENMP
)
...
...
Write
Preview
Supports
Markdown
0%
Try again
or
attach a new file
.
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Cancel
Please
register
or
sign in
to comment