MS Windows compatibility and Warnings removed

AMDiS/src/AdaptInfo.h

@@ -617,13 +617,13 @@ namespace AMDiS {
     }
 
     /// Returns \ref refineBisections
-    inline const int getRefineBisections(int index) const 
+    inline int getRefineBisections(int index) const 
     {
       return scalContents[index]->refineBisections;
     }
 
     /// Returns \ref coarseBisections
-    inline const int getCoarseBisections(int index) const 
+    inline int getCoarseBisections(int index) const 
     {
       return scalContents[index]->coarseBisections;
     }    
@@ -679,7 +679,7 @@ namespace AMDiS {
     }
 
     /// Returns true, if the adaptive procedure was deserialized from a file.
-    const bool isDeserialized() const 
+    bool isDeserialized() const 
     {
       return deserialized;
     }

AMDiS/src/AdaptInstationary.h

@@ -83,7 +83,7 @@ namespace AMDiS {
     }
 
     /// Returns \ref strategy
-    const int getStrategy() const 
+    int getStrategy() const 
     {
       return strategy;
     }

AMDiS/src/BasisFunction.h

@@ -125,19 +125,19 @@ namespace AMDiS {
     virtual void getBound(const ElInfo*, BoundaryType *) const {}
 
     /// Returns \ref degree of BasisFunction
-    inline const int getDegree() const 
+    inline int getDegree() const 
     { 
       return degree; 
     }
 
     /// Returns \ref dim of BasisFunction
-    inline const int getDim() const 
+    inline int getDim() const 
     { 
       return dim; 
     }
 
     /// Returns \ref nBasFcts which is the number of local basis functions
-    inline const int getNumber() const 
+    inline int getNumber() const 
     { 
       return nBasFcts; 
     }

AMDiS/src/DOFAdmin.h

@@ -121,25 +121,25 @@ namespace AMDiS {
      */
 
     /// Returns \ref sizeUsed.
-    inline const int getUsedSize() const 
+    inline int getUsedSize() const 
     { 
       return sizeUsed; 
     }
 
     /// Returns \ref size
-    inline const int getSize() const
+    inline int getSize() const
     { 
       return size; 
     }
 
     /// Returns \ref usedCount
-    inline const int getUsedDofs() const 
+    inline int getUsedDofs() const 
     { 
       return usedCount; 
     }
 
     /// Returns \ref holeCount
-    inline const int getHoleCount() const 
+    inline int getHoleCount() const 
     { 
       return holeCount; 
     }
@@ -151,7 +151,7 @@ namespace AMDiS {
     }
 
     /// Returns \ref nDof[i], i.e., the number of DOFs for the position i.
-    inline const int getNumberOfDofs(int i) const 
+    inline int getNumberOfDofs(int i) const 
     {
       return nDof[i];
     }
@@ -163,7 +163,7 @@ namespace AMDiS {
     }
  
     /// Returns \ref nPreDof[i]
-    inline const int getNumberOfPreDofs(int i) const 
+    inline int getNumberOfPreDofs(int i) const 
     {
       return nPreDof[i];
     }
@@ -187,7 +187,7 @@ namespace AMDiS {
     }
 
     /// Returns if the given DOF is free.
-    inline const bool isDofFree(int i) const 
+    inline bool isDofFree(int i) const 
     {
       return dofFree[i];
     }

AMDiS/src/DOFVector.h

@@ -154,33 +154,33 @@ namespace AMDiS {
       operatorEstFactor.push_back(estFactor);
     }
 
-    inline vector<double*>::iterator getOperatorFactorBegin() 
+    inline std::vector<double*>::iterator getOperatorFactorBegin() 
     {
       return operatorFactor.begin();
     }
 
-    inline vector<double*>::iterator getOperatorFactorEnd() 
+    inline std::vector<double*>::iterator getOperatorFactorEnd() 
     {
       return operatorFactor.end();
     }
 
-    inline vector<double*>::iterator getOperatorEstFactorBegin() 
+    inline std::vector<double*>::iterator getOperatorEstFactorBegin() 
     {
       return operatorEstFactor.begin();
     }
 
-    inline vector<double*>::iterator getOperatorEstFactorEnd() 
+    inline std::vector<double*>::iterator getOperatorEstFactorEnd() 
     {
       return operatorEstFactor.end();
     }
 
 
-    inline vector<Operator*>::iterator getOperatorsBegin() 
+    inline std::vector<Operator*>::iterator getOperatorsBegin() 
     {
       return operators.begin();
     }
 
-    inline vector<Operator*>::iterator getOperatorsEnd() 
+    inline std::vector<Operator*>::iterator getOperatorsEnd() 
     {
       return operators.end();
     }
@@ -193,17 +193,17 @@ namespace AMDiS {
     /// and \f$ m \f$ is the number of basis functions
     T evalUh(const DimVec<double>& lambda, DegreeOfFreedom* ind);
 
-    inline vector<Operator*>& getOperators() 
+    inline std::vector<Operator*>& getOperators() 
     { 
       return operators; 
     }
 
-    inline vector<double*>& getOperatorFactor() 
+    inline std::vector<double*>& getOperatorFactor() 
     { 
       return operatorFactor; 
     }
 
-    inline vector<double*>& getOperatorEstFactor() 
+    inline std::vector<double*>& getOperatorEstFactor() 
     { 
       return operatorEstFactor; 
     }
@@ -251,13 +251,13 @@ namespace AMDiS {
     ElementVector elementVector;
 
     ///
-    vector<Operator*> operators;
+    std::vector<Operator*> operators;
 
     ///
-    vector<double*> operatorFactor;
+    std::vector<double*> operatorFactor;
 
     ///
-    vector<double*> operatorEstFactor;
+    std::vector<double*> operatorEstFactor;
 
     ///
     BoundaryManager *boundaryManager;
@@ -345,7 +345,7 @@ namespace AMDiS {
     void init(const FiniteElemSpace* f, string n);
 
     /// Copy Constructor
-    DOFVector(const DOFVector& rhs) 
+    DOFVector(const DOFVector& rhs) : DOFVectorBase<T>()
     {
       *this = rhs;   
       this->name = rhs.name + "copy";
@@ -357,25 +357,25 @@ namespace AMDiS {
     virtual ~DOFVector();
 
     /// Returns iterator to the begin of \ref vec
-    typename vector<T>::iterator begin() 
+    typename std::vector<T>::iterator begin() 
     { 
       return vec.begin(); 
     }
 
     /// Returns iterator to the end of \ref vec
-    typename vector<T>::iterator end() 
+    typename std::vector<T>::iterator end() 
     { 
       return vec.end(); 
     }
 
     /// Returns const_iterator to the begin of \ref vec
-    typename vector<T>::const_iterator begin() const
+    typename std::vector<T>::const_iterator begin() const
     {
       return vec.begin();
     }
 
     /// Returns const_iterator to the end of \ref vec
-    typename vector<T>::const_iterator end() const
+    typename std::vector<T>::const_iterator end() const
     {
       return vec.end();
     }
@@ -383,7 +383,7 @@ namespace AMDiS {
     /// Used by DOFAdmin to compress this DOFVector. Implementation of
     /// \ref DOFIndexedBase::compress()
     virtual void compressDOFIndexed(int first, int last,
-				    vector<DegreeOfFreedom> &newDof);
+				    std::vector<DegreeOfFreedom> &newDof);
 
     /// Sets \ref coarsenOperation to op
     inline void setCoarsenOperation(CoarsenOperation op) 
@@ -404,7 +404,7 @@ namespace AMDiS {
     inline void refineInterpol(RCNeighbourList&, int) {}
 
     /// Returns \ref vec
-    vector<T>& getVector() 
+    std::vector<T>& getVector() 
     { 
       return vec;
     }
@@ -597,7 +597,7 @@ namespace AMDiS {
     /// Determine the DegreeOfFreedom that has coords with minimal euclidean 
     /// distance to WorldVector p. return true if DOF is found, and false 
     /// otherwise.
-    const bool getDofIdxAtPoint(WorldVector<double> &p, 
+    bool getDofIdxAtPoint(WorldVector<double> &p, 
 				DegreeOfFreedom &idx, 
 				ElInfo *oldElInfo = NULL, 
 				bool useOldElInfo = false) const;
@@ -630,7 +630,7 @@ namespace AMDiS {
   protected: 
 
     /// Data container
-    vector<T> vec; 
+    std::vector<T> vec; 
  
     /// Specifies what operation should be performed after coarsening
     CoarsenOperation coarsenOperation;
@@ -846,7 +846,7 @@ namespace AMDiS {
   }
 
   template<typename T>
-  inline void checkFeSpace(const FiniteElemSpace* feSpace, const vector<T>& vec)
+  inline void checkFeSpace(const FiniteElemSpace* feSpace, const std::vector<T>& vec)
   {
     TEST_EXIT_DBG(feSpace)("feSpace is NULL\n");
     TEST_EXIT_DBG(feSpace->getAdmin())("admin is NULL\n");
@@ -859,8 +859,8 @@ namespace AMDiS {
 					     WorldVector<DOFVector<double>*> *result);
   
   template<typename T>
-  vector<DOFVector<double>*> *transform(DOFVector<typename GradientType<T>::type> *vec,
-					     vector<DOFVector<double>*> *res);
+  std::vector<DOFVector<double>*> *transform(DOFVector<typename GradientType<T>::type> *vec,
+					     std::vector<DOFVector<double>*> *res);
 
   
   /// Computes the integral: \f$ \int f(\vec{x})\,\text{d}\vec{x}\f$
@@ -931,14 +931,14 @@ namespace AMDiS {
 			   BinaryAbstractFunction<TOut, T, WorldVector<double> > *fct);
   
   /// Computes the integral: \f$ \int f(\{v_i(\vec{x})\}_i)\,\text{d}\vec{x}\f$
-  double integrateGeneral(const vector<DOFVector<double>*> &vecs,
-			  AbstractFunction<double, vector<double> > *fct);
+  double integrateGeneral(const std::vector<DOFVector<double>*> &vecs,
+			  AbstractFunction<double, std::vector<double> > *fct);
   
   /// Computes the integral: 
   /// \f$ \int f(\{v_i(\vec{x})\}_i,\{\nabla w_i(\vec{x})\}_i)\,\text{d}\vec{x}\f$
-  double integrateGeneralGradient(const vector<DOFVector<double>*> &vecs,
-				  const vector<DOFVector<double>*> &grds,
-				  BinaryAbstractFunction<double, vector<double>, vector<WorldVector<double> > > *fct);
+  double integrateGeneralGradient(const std::vector<DOFVector<double>*> &vecs,
+				  const std::vector<DOFVector<double>*> &grds,
+				  BinaryAbstractFunction<double, std::vector<double>, std::vector<WorldVector<double> > > *fct);
 
 }
 

AMDiS/src/DOFVector.hh

@@ -947,7 +947,7 @@ namespace AMDiS {
 
 
   template<typename T>
-  const bool DOFVector<T>::getDofIdxAtPoint(WorldVector<double> &p, 
+  bool DOFVector<T>::getDofIdxAtPoint(WorldVector<double> &p, 
 					    DegreeOfFreedom &idx, 
 					    ElInfo *oldElInfo, 
 					    bool useOldElInfo) const

AMDiS/src/ElInfo.h

@@ -385,7 +385,7 @@ namespace AMDiS {
     /// with respect to \ref element of a point with world coordinates world.
     /// The barycentric coordinates are stored in lambda. 
     /// pure virtual => must be overriden in sub-class.
-    virtual const int worldToCoord(const WorldVector<double>& world, 
+    virtual int worldToCoord(const WorldVector<double>& world, 
 				   DimVec<double>* lambda) const = 0;
 
     /// Fills this ElInfo with macro element information of mel.

AMDiS/src/ElInfo1d.cc

@@ -143,7 +143,7 @@ namespace AMDiS {
     return sqrt(adet2);
   }
 
-  const int ElInfo1d::worldToCoord(const WorldVector<double>& x,
+  int ElInfo1d::worldToCoord(const WorldVector<double>& x,
 				   DimVec<double>* lambda) const
   {
     FUNCNAME("ElInfo1d::worldToCoord()");

AMDiS/src/ElInfo1d.h

@@ -47,7 +47,7 @@ namespace AMDiS {
     void fillMacroInfo(const MacroElement*);
 
     /// 1-dimensional realisation of ElInfo's worldToCoord method.
-    const int worldToCoord(const WorldVector<double>& w, DimVec<double>* l) const;
+    int worldToCoord(const WorldVector<double>& w, DimVec<double>* l) const;
 
     /// 1-dimensional realisation of ElInfo's calcGrdLambda method.
     double calcGrdLambda(DimVec<WorldVector<double> >& grd_lam);

AMDiS/src/ElInfo2d.cc

@@ -661,7 +661,7 @@ namespace AMDiS {
   }
 
 
-  const int ElInfo2d::worldToCoord(const WorldVector<double>& xy, 
+  int ElInfo2d::worldToCoord(const WorldVector<double>& xy, 
 				   DimVec<double>* lambda) const
   {
     FUNCNAME("ElInfo::worldToCoord()");

AMDiS/src/ElInfo2d.h

@@ -48,7 +48,7 @@ namespace AMDiS {
     void fillMacroInfo(const MacroElement*);
 
     /// 2-dimensional realisation of ElInfo's worldToCoord method.
-    const int worldToCoord(const WorldVector<double>& w, DimVec<double>* l) const;
+    int worldToCoord(const WorldVector<double>& w, DimVec<double>* l) const;
 
     /// 2-dimensional realisation of ElInfo's calcGrdLambda method.
     double calcGrdLambda(DimVec<WorldVector<double> >& grd_lam);

AMDiS/src/ElInfo3d.cc

@@ -318,7 +318,7 @@ namespace AMDiS {
   }
 
 
-  const int ElInfo3d::worldToCoord(const WorldVector<double>& xy,
+  int ElInfo3d::worldToCoord(const WorldVector<double>& xy,
 				   DimVec<double>* lambda) const
   {
     FUNCNAME("ElInfo::worldToCoord()");

AMDiS/src/ElInfo3d.h

@@ -60,7 +60,7 @@ namespace AMDiS {
     void fillMacroInfo(const MacroElement *);
 
     /// 3-dimensional realisation of ElInfo's worldToCoord method.
-    const int worldToCoord(const WorldVector<double>& w, DimVec<double>* l) const;
+    int worldToCoord(const WorldVector<double>& w, DimVec<double>* l) const;
 
     /// 3-dimensional realisation of ElInfo's calcGrdLambda method.
     double calcGrdLambda(DimVec<WorldVector<double> >& grd_lam);

AMDiS/src/Element.h

@@ -111,7 +111,7 @@ namespace AMDiS {
 
     /// Returns true if Element is a leaf element (\ref child[0] == NULL), returns
     /// false otherwise.
-    inline const bool isLeaf() const 
+    inline bool isLeaf() const 
     { 
       return (child[0] == NULL); 
     }
@@ -204,7 +204,7 @@ namespace AMDiS {
     virtual int getGeo(GeoIndex i) const = 0;
 
     /// Returns Element's \ref mark
-    inline const int getMark() const 
+    inline int getMark() const 
     { 
       return mark;
     }

AMDiS/src/ElementData.h

@@ -86,7 +86,7 @@ namespace AMDiS {
     }
 
     /// Returns the id of element data type.
-    virtual const int getTypeID() const 
+    virtual int getTypeID() const 
     {
       return 0;
     }

AMDiS/src/ElementRegion_ED.h

@@ -64,7 +64,7 @@ namespace AMDiS {
       return "ElementRegion_ED"; 
     }
 
-    inline const int getTypeID() const 
+    inline int getTypeID() const 
     { 
       return ELEMENT_REGION; 
     }

AMDiS/src/Flag.h

@@ -110,7 +110,7 @@ namespace AMDiS {
       flags &= ~f.flags; 
     }
 
-    inline const unsigned long getFlags() const 
+    inline unsigned long getFlags() const 
     { 
       return flags; 
     }

AMDiS/src/Global.cc

@@ -349,6 +349,7 @@ namespace AMDiS {
 
   void processMemUsage(double& vm_usage, double& resident_set, bool inMegaByte)
   {
+#ifndef _WIN32
     using std::ios_base;
     using std::ifstream;
     using std::string;
@@ -383,6 +384,9 @@ namespace AMDiS {
       vm_usage /= 1024.0;
       resident_set /= 1024.0;
     }
+#else
+    ERROR("Function not available under MS Windows\n");
+#endif
   }
 
 

AMDiS/src/Global.h

@@ -52,6 +52,12 @@
 #include <float.h>
 #include <time.h>
 
+#ifdef _WIN32
+#include <io.h>
+#else
+#include <unistd.h>
+#endif
+
 #if HAVE_PARALLEL_DOMAIN_AMDIS
 #include <mpi.h>
 #endif
@@ -133,7 +139,11 @@ namespace AMDiS {
   /// check for file existence
   inline bool file_exists(const std::string filename)
   {
+#ifdef _WIN32
+    return _access(filename.c_str(), 0) == 0;
+#else
     return access(filename.c_str(), F_OK) == 0;
+#endif
   };
 
   /// trim std::string

AMDiS/src/Initfile.cc

@@ -65,7 +65,7 @@ namespace AMDiS {
   /// Fill an initfile from an input stream
   void Initfile::read(istream& in) 
   {
-    unsigned line_length = 512;
+    const unsigned line_length = 512;
     char swap[line_length];
     in.getline(swap, line_length);
     while (in.good() || in.gcount() > 0) {

AMDiS/src/LeafData.h

@@ -112,7 +112,7 @@ namespace AMDiS {
       return "LeafDataEstimatable"; 
     }
 
-    inline const int getTypeID() const 
+    inline int getTypeID() const 
     { 
       return ESTIMATABLE; 
     }
@@ -198,7 +198,7 @@ namespace AMDiS {
       return "LeafDataEstimatableVec";
     }
   
-    inline const int getTypeID() const 
+    inline int getTypeID() const 
     { 
       return ESTIMATABLE; 
     }
@@ -294,7 +294,7 @@ namespace AMDiS {
       return "LeafDataCoarsenable";
     }
   
-    inline const int getTypeID() const 
+    inline int getTypeID() const 
     { 
       return COARSENABLE; 
     }
@@ -379,7 +379,7 @@ namespace AMDiS {
       return "LeafDataCoarsenableVec";
     }
   
-    inline const int getTypeID() const 
+    inline int getTypeID() const 
     { 
       return COARSENABLE; 
     }
@@ -484,7 +484,7 @@ namespace AMDiS {
       return "LeafDataPeriodic";
     }
   
-    inline const int getTypeID() const 
+    inline int getTypeID() const 
     { 
       return PERIODIC; 
     }

AMDiS/src/Mesh.h

@@ -96,49 +96,49 @@ namespace AMDiS {
     }
 
     /// Returns \ref nDofEl of the mesh
-    inline const int getNumberOfAllDofs() const 
+    inline int getNumberOfAllDofs() const 
     { 
       return nDofEl; 
     }
 
     /// Returns \ref nNodeEl of the mesh
-    inline const int getNumberOfNodes() const 
+    inline int getNumberOfNodes() const 
     { 
       return nNodeEl; 
     }
 
     /// Returns \ref nVertices of the mesh
-    inline const int getNumberOfVertices() const 
+    inline int getNumberOfVertices() const 
     { 
       return nVertices; 
     }
 
     /// Returns \ref nEdges of the mesh 
-    inline const int getNumberOfEdges() const 
+    inline int getNumberOfEdges() const 
     { 
       return nEdges; 
     }
 
     /// Returns \ref nFaces of the mesh 
-    inline const int getNumberOfFaces() const 
+    inline int getNumberOfFaces() const 
     { 
       return nFaces; 
     }
 
     /// Returns \ref nLeaves of the mesh 
-    inline const int getNumberOfLeaves() const 
+    inline int getNumberOfLeaves() const 
     { 
       return nLeaves; 
     }
 
     /// Returns \ref nElements of the mesh
-    inline const int getNumberOfElements() const 
+    inline int getNumberOfElements() const 
     { 
       return nElements; 
     }
 
     /// Returns \ref maxEdgeNeigh of the mesh
-    inline const int getMaxEdgeNeigh() const 
+    inline int getMaxEdgeNeigh() const 
     { 
       return maxEdgeNeigh; 
     }
@@ -156,7 +156,7 @@ namespace AMDiS {
     }
 
     /// Returns nDof[i] of the mesh
-    inline const int getNumberOfDofs(int i) const 
+    inline int getNumberOfDofs(int i) const 
     { 
       TEST_EXIT_DBG(i <= dim)("Wrong index: %d %d\n", i, dim);
       return nDof[i]; 
@@ -199,14 +199,14 @@ namespace AMDiS {
 
     /// Returns the size of \ref admin which is the number of the DOFAdmins
     /// belonging to this mesh
-    const int getNumberOfDOFAdmin() const 
+    int getNumberOfDOFAdmin() const 
     {
       return admin.size();
     }
 
     /// Returns the size of \ref macroElements which is the number of
     /// of macro elements of this mesh
-    const int getNumberOfMacros() const 
+    int getNumberOfMacros() const 
     {
       return macroElements.size();
     }

AMDiS/src/MeshStructure_ED.h

@@ -84,7 +84,7 @@ namespace AMDiS {
       return true;
     }
 
-    virtual const int getTypeID() const 
+    virtual int getTypeID() const 
     {
       return MESH_STRUCTURE;