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amdis
Commit b81cf528 authored by Thomas Witkowski's avatar Thomas Witkowski
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Go into weekend.

parent 6de23628
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Showing with 127 additions and 57 deletions
AMDiS/src/parallel/PetscSolverFeti.cc
View file @ b81cf528
......@@ -768,9 +768,9 @@ namespace AMDiS {
fetiData.subSolver = subdomain;
fetiData.ksp_schur_primal = &ksp_schur_primal;
localDofMap.createVec(fetiData.tmp_vec_b, nGlobalOverallInterior);
localDofMap.createVec(fetiData.tmp_vec_b0, nGlobalOverallInterior);
lagrangeMap.createVec(fetiData.tmp_vec_lagrange);
primalDofMap.createVec(fetiData.tmp_vec_primal);
primalDofMap.createVec(fetiData.tmp_vec_primal0);
if (enableStokesMode == false) {
MatCreateShell(mpiCommGlobal,
......@@ -782,6 +782,10 @@ namespace AMDiS {
MatShellSetOperation(mat_feti, MATOP_MULT,
(void(*)(void))petscMultMatFeti);
} else {
localDofMap.createVec(fetiData.tmp_vec_b1, nGlobalOverallInterior);
primalDofMap.createVec(fetiData.tmp_vec_primal1);
interfaceDofMap.createVec(fetiData.tmp_vec_interface);
MatCreateShell(mpiCommGlobal,
interfaceDofMap.getRankDofs() + lagrangeMap.getRankDofs(),
interfaceDofMap.getRankDofs() + lagrangeMap.getRankDofs(),
......@@ -789,7 +793,7 @@ namespace AMDiS {
interfaceDofMap.getOverallDofs() + lagrangeMap.getOverallDofs(),
&fetiData, &mat_feti);
MatShellSetOperation(mat_feti, MATOP_MULT,
(void(*)(void))petscMultMatFetiInterface);
(void(*)(void))petscMultMatFetiInterface);
}
KSPCreate(mpiCommGlobal, &ksp_feti);
......@@ -799,6 +803,27 @@ namespace AMDiS {
KSPSetTolerances(ksp_feti, 0, 1e-8, 1e+3, 1000);
KSPSetFromOptions(ksp_feti);
if (enableStokesMode) {
Vec nullSpaceInterface;
Vec nullSpaceLagrange;
Vec nullSpaceBasis;
interfaceDofMap.createVec(nullSpaceInterface);
VecSet(nullSpaceInterface, 1.0);
lagrangeMap.createVec(nullSpaceLagrange);
VecSet(nullSpaceLagrange, 0.0);
Vec vecArray[2] = {nullSpaceInterface, nullSpaceLagrange};
VecCreateNest(mpiCommGlobal, 2, PETSC_NULL, vecArray, &nullSpaceBasis);
MatNullSpace matNullspace;
MatNullSpaceCreate(mpiCommGlobal, PETSC_FALSE, 1, &nullSpaceBasis, &matNullspace);
MatSetNullSpace(mat_feti, matNullspace);
KSPSetNullSpace(ksp_feti, matNullspace);
}
// === Create FETI-DP preconditioner object. ===
......@@ -913,9 +938,16 @@ namespace AMDiS {
fetiData.subSolver = NULL;
fetiData.ksp_schur_primal = PETSC_NULL;
VecDestroy(&fetiData.tmp_vec_b);
VecDestroy(&fetiData.tmp_vec_b0);
VecDestroy(&fetiData.tmp_vec_lagrange);
VecDestroy(&fetiData.tmp_vec_primal);
VecDestroy(&fetiData.tmp_vec_primal0);
if (enableStokesMode) {
VecDestroy(&fetiData.tmp_vec_b1);
VecDestroy(&fetiData.tmp_vec_primal1);
VecDestroy(&fetiData.tmp_vec_interface);
}
MatDestroy(&mat_feti);
KSPDestroy(&ksp_feti);
......@@ -1520,30 +1552,39 @@ namespace AMDiS {
FetiTimings::fetiPreconditioner);
}
// === Solve for u_primals. ===
VecCopy(subdomain->getVecRhsCoarse(), tmp_primal0);
subdomain->solveGlobal(subdomain->getVecRhsInterior(), tmp_b0);
MatMult(subdomain->getMatCoarseInterior(), tmp_b0, tmp_primal1);
VecAXPBY(tmp_primal0, -1.0, 1.0, tmp_primal1);
MatMultTranspose(mat_lagrange, vecSol, tmp_b0);
subdomain->solveGlobal(tmp_b0, tmp_b0);
MatMult(subdomain->getMatCoarseInterior(), tmp_b0, tmp_primal1);
if (!enableStokesMode) {
MatMultTranspose(mat_lagrange, vecSol, tmp_b0);
VecAYPX(tmp_b0, -1.0, subdomain->getVecRhsInterior());
} else {
MatMultTranspose(mat_lagrange, vecSolLagrange, tmp_b0);
VecAYPX(tmp_b0, -1.0, subdomain->getVecRhsInterior());
MatMult(subdomain->getMatInteriorCoarse(1), vecSolInterface, tmp_b1);
VecAXPY(tmp_b0, -1.0, tmp_b1);
}
subdomain->solveGlobal(tmp_b0, tmp_b1);
MatMult(subdomain->getMatCoarseInterior(), tmp_b1, tmp_primal0);
VecAYPX(tmp_primal0, -1.0, subdomain->getVecRhsCoarse());
if (enableStokesMode) {
MatMult(subdomain->getMatCoarse(0, 1), vecSolInterface, tmp_primal1);
VecAXPY(tmp_primal0, -1.0, tmp_primal1);
}
VecAXPBY(tmp_primal0, 1.0, 1.0, tmp_primal1);
KSPSolve(ksp_schur_primal, tmp_primal0, tmp_primal0);
// === Solve for u_b. ===
VecCopy(subdomain->getVecRhsInterior(), tmp_b0);
MatMultTranspose(mat_lagrange, vecSol, tmp_b1);
VecAXPBY(tmp_b0, -1.0, 1.0, tmp_b1);
// === Solve for u_b. ===
MatMult(subdomain->getMatInteriorCoarse(), tmp_primal0, tmp_b1);
VecAXPBY(tmp_b0, -1.0, 1.0, tmp_b1);
VecAXPY(tmp_b0, -1.0, tmp_b1);
subdomain->solveGlobal(tmp_b0, tmp_b0);
// === And recover AMDiS solution vectors. ===
recoverSolution(tmp_b0, tmp_primal0, vec);
......
AMDiS/src/parallel/PetscSolverFetiOperators.cc
View file @ b81cf528
......@@ -48,30 +48,30 @@ namespace AMDiS {
MatShellGetContext(mat, &ctx);
FetiData* data = static_cast<FetiData*>(ctx);
MatMultTranspose(*(data->mat_lagrange), x, data->tmp_vec_b);
MatMultTranspose(*(data->mat_lagrange), x, data->tmp_vec_b0);
double wtime01 = MPI::Wtime();
data->subSolver->solveGlobal(data->tmp_vec_b, data->tmp_vec_b);
data->subSolver->solveGlobal(data->tmp_vec_b0, data->tmp_vec_b0);
FetiTimings::fetiSolve01 += (MPI::Wtime() - wtime01);
MatMult(*(data->mat_lagrange), data->tmp_vec_b, data->tmp_vec_lagrange);
MatMult(*(data->mat_lagrange), data->tmp_vec_b0, data->tmp_vec_lagrange);
MatMult(data->subSolver->getMatCoarseInterior(),
data->tmp_vec_b, data->tmp_vec_primal);
data->tmp_vec_b0, data->tmp_vec_primal0);
wtime01 = MPI::Wtime();
KSPSolve(*(data->ksp_schur_primal), data->tmp_vec_primal, data->tmp_vec_primal);
KSPSolve(*(data->ksp_schur_primal), data->tmp_vec_primal0, data->tmp_vec_primal0);
FetiTimings::fetiSolve02 += (MPI::Wtime() - wtime01);
MatMult(data->subSolver->getMatInteriorCoarse(),
data->tmp_vec_primal, data->tmp_vec_b);
data->tmp_vec_primal0, data->tmp_vec_b0);
wtime01 = MPI::Wtime();
data->subSolver->solveGlobal(data->tmp_vec_b, data->tmp_vec_b);
data->subSolver->solveGlobal(data->tmp_vec_b0, data->tmp_vec_b0);
FetiTimings::fetiSolve01 += (MPI::Wtime() - wtime01);
MatMult(*(data->mat_lagrange), data->tmp_vec_b, y);
MatMult(*(data->mat_lagrange), data->tmp_vec_b0, y);
VecAXPBY(y, 1.0, 1.0, data->tmp_vec_lagrange);
......@@ -97,32 +97,68 @@ namespace AMDiS {
MatShellGetContext(mat, &ctx);
FetiData* data = static_cast<FetiData*>(ctx);
MatMultTranspose(*(data->mat_lagrange), x_lagrange, data->tmp_vec_b);
double wtime01 = MPI::Wtime();
data->subSolver->solveGlobal(data->tmp_vec_b, data->tmp_vec_b);
// === Calculation of v_{B} ===
FetiTimings::fetiSolve01 += (MPI::Wtime() - wtime01);
// tmp_vec_b0 = J^{T} \lambda
MatMultTranspose(*(data->mat_lagrange), x_lagrange, data->tmp_vec_b0);
// tmp_vec_b1 = A_{B\Gamma} u_{\Gamma}
MatMult(data->subSolver->getMatInteriorCoarse(1), x_interface, data->tmp_vec_b1);
// tmp_vec_b0 = A_{B\Gamma} u_{\Gamma} + J^{T} \lambda
VecAXPY(data->tmp_vec_b0, 1.0, data->tmp_vec_b1);
// == Calculation of v_{\Pi}
// tmp_vec_primal0 = A_{\Pi\Gamma} u_{\Gamma}
MatMult(data->subSolver->getMatCoarse(0, 1), x_interface, data->tmp_vec_primal0);
// === Calculate action of FETI-DP operator ===
MatMult(*(data->mat_lagrange), data->tmp_vec_b, data->tmp_vec_lagrange);
double wtime01 = MPI::Wtime();
// tmp_vec_b0 = A_{BB}^{-1} v_{B}
data->subSolver->solveGlobal(data->tmp_vec_b0, data->tmp_vec_b0);
FetiTimings::fetiSolve01 += (MPI::Wtime() - wtime01);
// tmp_vec_primal1 = A_{\Pi B} A_{BB}^{-1} v_{B}
MatMult(data->subSolver->getMatCoarseInterior(),
data->tmp_vec_b, data->tmp_vec_primal);
data->tmp_vec_b0, data->tmp_vec_primal1);
// tmp_vec_primal0 = v_{\Pi} - A_{\Pi B} A_{BB}^{-1} v_{B}
VecAXPY(data->tmp_vec_primal0, -1.0, data->tmp_vec_primal1);
wtime01 = MPI::Wtime();
KSPSolve(*(data->ksp_schur_primal), data->tmp_vec_primal, data->tmp_vec_primal);
// tmp_vec_primal0 = S_{\Pi\Pi}^{-1} (v_{\Pi} - A_{\Pi B} A_{BB}^{-1} v_{B})
KSPSolve(*(data->ksp_schur_primal), data->tmp_vec_primal0, data->tmp_vec_primal0);
FetiTimings::fetiSolve02 += (MPI::Wtime() - wtime01);
// tmp_vec_b1 = A_{B\Pi} S_{\Pi\Pi}^{-1} (v_{\Pi} - A_{\Pi B} A_{BB}^{-1} v_{B})
MatMult(data->subSolver->getMatInteriorCoarse(),
data->tmp_vec_primal, data->tmp_vec_b);
data->tmp_vec_primal0, data->tmp_vec_b1);
wtime01 = MPI::Wtime();
data->subSolver->solveGlobal(data->tmp_vec_b, data->tmp_vec_b);
// tmp_vec_b1 = A_{BB}^{-1} A_{B\Pi} S_{\Pi\Pi}^{-1} (v_{\Pi} - A_{\Pi B} A_{BB}^{-1} v_{B})
data->subSolver->solveGlobal(data->tmp_vec_b1, data->tmp_vec_b1);
FetiTimings::fetiSolve01 += (MPI::Wtime() - wtime01);
MatMult(*(data->mat_lagrange), data->tmp_vec_b, y_lagrange);
// tmp_vec_b0 = A_{BB}^{-1} v_{B} - A_{BB}^{-1} A_{B\Pi} S_{\Pi\Pi}^{-1} (v_{\Pi} - A_{\Pi B} A_{BB}^{-1} v_{B})
VecAXPY(data->tmp_vec_b0, -1.0, data->tmp_vec_b1);
// === Calculate projection to interface and constraint variable ===
// y_interface = A_{\Gamma B} tmp_vec_b0
MatMult(data->subSolver->getMatCoarseInterior(1), data->tmp_vec_b0, y_interface);
// tmp_vec_primal0 = S_{\Pi\Pi}^{-1} (v_{\Pi} - A_{\Pi B} A_{BB}^{-1} v_{B})
// tmp_vec_interface = A_{\Gamma \Pi} tmp_vec_primal0
MatMult(data->subSolver->getMatCoarse(1, 0), data->tmp_vec_primal0, data->tmp_vec_interface);
// y_interface = A_{\Gamma B} tmp_vec_b0 + A_{\Gamma \Pi} tmp_vec_primal0
VecAXPY(y_interface, 1.0, data->tmp_vec_interface);
VecAXPBY(y_lagrange, 1.0, 1.0, data->tmp_vec_lagrange);
// y_lagrange = J tmp_vec_b0
MatMult(*(data->mat_lagrange), data->tmp_vec_b0, y_lagrange);
FetiTimings::fetiSolve += (MPI::Wtime() - wtime);
......
AMDiS/src/parallel/PetscSolverFetiStructs.h
View file @ b81cf528
......@@ -57,14 +57,16 @@ namespace AMDiS {
Mat *mat_lagrange;
/// Temporal vectors on the B variables.
Vec tmp_vec_b;
Vec tmp_vec_b0, tmp_vec_b1;
/// Temporal vector on the primal variables.
Vec tmp_vec_primal;
Vec tmp_vec_primal0, tmp_vec_primal1;
/// Temporal vector on the lagrange variables.
Vec tmp_vec_lagrange;
Vec tmp_vec_interface;
PetscSolver* subSolver;
/// Pointer to the solver of the schur complement on the primal variables.
......
AMDiS/src/parallel/PetscSolverGlobalMatrix.cc
View file @ b81cf528
......@@ -161,22 +161,12 @@ namespace AMDiS {
bool isColCoarse =
isCoarseSpace(colComponent, feSpaces[colComponent], col(*icursor));
if (isColCoarse) {
if (isRowCoarse) {
cols.push_back(col(*icursor));
values.push_back(value(*icursor));
} else {
colsOther.push_back(col(*icursor));
valuesOther.push_back(value(*icursor));
}
if (isColCoarse == isRowCoarse) {
cols.push_back(col(*icursor));
values.push_back(value(*icursor));
} else {
if (isRowCoarse) {
colsOther.push_back(col(*icursor));
valuesOther.push_back(value(*icursor));
} else {
cols.push_back(col(*icursor));
values.push_back(value(*icursor));
}
colsOther.push_back(col(*icursor));
valuesOther.push_back(value(*icursor));
}
} // for each nnz in row
......@@ -341,8 +331,9 @@ namespace AMDiS {
MatNullSpaceCreate(mpiCommGlobal, PETSC_TRUE, 0, PETSC_NULL, &matNullspace);
}
MatSetNullSpace(getMatInterior(), matNullspace);
KSPSetNullSpace(kspInterior, matNullspace);
MSG("NULLSPACE IS NOT REMOVED!\n");
// MatSetNullSpace(getMatInterior(), matNullspace);
// KSPSetNullSpace(kspInterior, matNullspace);
// === Remove null space, if requested. ===
......
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