Mesh.cc 28.8 KB
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      macroElements[i] = NEW MacroElement(dim);
      macroElements[i]->writeNeighboursTo(&(neighbourIndices[i]));
      macroElements[i]->deserialize(in);
    }

    // read elementIndex
    in.read(reinterpret_cast<char*>(&elementIndex), sizeof(int));

    // read initialized
    in.read(reinterpret_cast<char*>(&initialized), sizeof(bool));

    // set neighbour pointer in macro elements
    int j, neighs = getGeo(NEIGH);
    for(i = 0; i < static_cast<int>(macroElements.size()); i++) {
      for(j = 0; j < neighs; j++) {
	int index = neighbourIndices[i][j];
	if(index != -1) {
	  macroElements[i]->setNeighbour(j, macroElements[index]);
	} else {
	  macroElements[i]->setNeighbour(j, NULL);
	}
      }
    }

    // set mesh pointer in elements
    TraverseStack stack;
    ElInfo *elInfo = stack.traverseFirst(this, -1, CALL_EVERY_EL_PREORDER);
    while(elInfo) {
      elInfo->getElement()->setMesh(this);
      elInfo = stack.traverseNext(elInfo);
    }

    serializedDOFs.clear();
  }

  void Mesh::initialize() 
  {
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    std::string macroFilename("");
    std::string valueFilename("");
    std::string periodicFile("");
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    int check = 1;

    GET_PARAMETER(0, name + "->macro file name",  &macroFilename);
    GET_PARAMETER(0, name + "->value file name",  &valueFilename);
    GET_PARAMETER(0, name + "->periodic file", &periodicFile);
    GET_PARAMETER(0, name + "->check", "%d", &check);
    GET_PARAMETER(0, name + "->preserve coarse dofs", "%d", &preserveCoarseDOFs);

    if (macroFilename.length()) {
      macroFileInfo_ = MacroReader::readMacro(macroFilename.c_str(), 
					      this,
					      periodicFile == "" ? NULL : periodicFile.c_str(),
					      check);

      // If there is no value file which should be written, we can delete
      // the information of the macro file.
      if (!valueFilename.length()) {
	clearMacroFileInfo();
      }
    }

    initialized = true;
  }

  bool Mesh::associated(DegreeOfFreedom dof1, DegreeOfFreedom dof2) {
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    std::map<BoundaryType, VertexVector*>::iterator it;
    std::map<BoundaryType, VertexVector*>::iterator end = periodicAssociations.end();
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    for (it = periodicAssociations.begin(); it != end; ++it) {
      if ((*(it->second))[dof1] == dof2)
	return true;
    }
    return false;
  }

  bool Mesh::indirectlyAssociated(DegreeOfFreedom dof1, DegreeOfFreedom dof2) {
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    std::vector<DegreeOfFreedom> associatedToDOF1;
    std::map<BoundaryType, VertexVector*>::iterator it;
    std::map<BoundaryType, VertexVector*>::iterator end = periodicAssociations.end();
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    DegreeOfFreedom dof, assDOF;

    associatedToDOF1.push_back(dof1);
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    for (it = periodicAssociations.begin(); it != end; ++it) {
      int size = static_cast<int>(associatedToDOF1.size());
      for (int i = 0; i < size; i++) {
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	dof = associatedToDOF1[i];
	assDOF = (*(it->second))[dof];
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	if (assDOF == dof2) {
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	  return true;
	} else {
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	  if (assDOF != dof) 
	    associatedToDOF1.push_back(assDOF);
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	}
      }
    }
    return false;
  }

  void Mesh::clearMacroFileInfo()
  {
    macroFileInfo_->clear(getNumberOfEdges(),
			  getNumberOfVertices());
    DELETE macroFileInfo_;
  }
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  int Mesh::calcMemoryUsage()
  {
    int result = 0;

    result += sizeof(Mesh);
    for (int i = 0; i < static_cast<int>(macroElements.size()); i++) {
      result += macroElements[i]->calcMemoryUsage();
    }
    
    return result;
  }
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}
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