Skip to content
GitLab
Projects
Groups
Snippets
/
Help
Help
Support
Community forum
Keyboard shortcuts
?
Submit feedback
Contribute to GitLab
Sign in
Toggle navigation
Menu
Open sidebar
iwr
amdis
Commits
83ad8a9e
Commit
83ad8a9e
authored
Jul 22, 2010
by
Thomas Witkowski
Browse files
Solved problem when more than one serialization file is read in parallel computations.
parent
4b179c99
Changes
11
Expand all
Hide whitespace changes
Inline
Side-by-side
AMDiS/Makefile.in
View file @
83ad8a9e
...
@@ -140,7 +140,6 @@ PACKAGE_VERSION = @PACKAGE_VERSION@
...
@@ -140,7 +140,6 @@ PACKAGE_VERSION = @PACKAGE_VERSION@
PATH_SEPARATOR
=
@PATH_SEPARATOR@
PATH_SEPARATOR
=
@PATH_SEPARATOR@
PETSC_DIR
=
@PETSC_DIR@
PETSC_DIR
=
@PETSC_DIR@
RANLIB
=
@RANLIB@
RANLIB
=
@RANLIB@
SED
=
@SED@
SET_MAKE
=
@SET_MAKE@
SET_MAKE
=
@SET_MAKE@
SHELL
=
@SHELL@
SHELL
=
@SHELL@
STRIP
=
@STRIP@
STRIP
=
@STRIP@
...
...
AMDiS/aclocal.m4
View file @
83ad8a9e
...
@@ -1578,27 +1578,10 @@ linux*)
...
@@ -1578,27 +1578,10 @@ linux*)
# before this can be enabled.
# before this can be enabled.
hardcode_into_libs=yes
hardcode_into_libs=yes
# find out which ABI we are using
libsuff=
case "$host_cpu" in
x86_64*|s390x*|powerpc64*)
echo '[#]line __oline__ "configure"' > conftest.$ac_ext
if AC_TRY_EVAL(ac_compile); then
case `/usr/bin/file conftest.$ac_objext` in
*64-bit*)
libsuff=64
sys_lib_search_path_spec="/lib${libsuff} /usr/lib${libsuff} /usr/local/lib${libsuff}"
;;
esac
fi
rm -rf conftest*
;;
esac
# Append ld.so.conf contents to the search path
# Append ld.so.conf contents to the search path
if test -f /etc/ld.so.conf; then
if test -f /etc/ld.so.conf; then
lt_ld_extra=`awk '/^include / { system(sprintf("cd /etc; cat %s
2>/dev/null
", \[$]2)); skip = 1; } { if (!skip) print \[$]0; skip = 0; }' < /etc/ld.so.conf | $SED -e 's/#.*//;s/[:, ]/ /g;s/=[^=]*$//;s/=[^= ]* / /g;/^$/d' | tr '\n' ' '`
lt_ld_extra=`awk '/^include / { system(sprintf("cd /etc; cat %s", \[$]2)); skip = 1; } { if (!skip) print \[$]0; skip = 0; }' < /etc/ld.so.conf | $SED -e 's/#.*//;s/[:, ]/ /g;s/=[^=]*$//;s/=[^= ]* / /g;/^$/d' | tr '\n' ' '`
sys_lib_dlsearch_path_spec="/lib
${libsuff} /usr/lib${libsuff}
$lt_ld_extra"
sys_lib_dlsearch_path_spec="/lib
/usr/lib
$lt_ld_extra"
fi
fi
# We used to test for /lib/ld.so.1 and disable shared libraries on
# We used to test for /lib/ld.so.1 and disable shared libraries on
...
@@ -4305,9 +4288,6 @@ CC=$lt_[]_LT_AC_TAGVAR(compiler, $1)
...
@@ -4305,9 +4288,6 @@ CC=$lt_[]_LT_AC_TAGVAR(compiler, $1)
# Is the compiler the GNU C compiler?
# Is the compiler the GNU C compiler?
with_gcc=$_LT_AC_TAGVAR(GCC, $1)
with_gcc=$_LT_AC_TAGVAR(GCC, $1)
gcc_dir=\`gcc -print-file-name=. | $SED 's,/\.$,,'\`
gcc_ver=\`gcc -dumpversion\`
# An ERE matcher.
# An ERE matcher.
EGREP=$lt_EGREP
EGREP=$lt_EGREP
...
@@ -4441,11 +4421,11 @@ striplib=$lt_striplib
...
@@ -4441,11 +4421,11 @@ striplib=$lt_striplib
# Dependencies to place before the objects being linked to create a
# Dependencies to place before the objects being linked to create a
# shared library.
# shared library.
predep_objects=
\`echo
$lt_[]_LT_AC_TAGVAR(predep_objects, $1)
| \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\`
predep_objects=$lt_[]_LT_AC_TAGVAR(predep_objects, $1)
# Dependencies to place after the objects being linked to create a
# Dependencies to place after the objects being linked to create a
# shared library.
# shared library.
postdep_objects=
\`echo
$lt_[]_LT_AC_TAGVAR(postdep_objects, $1)
| \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\`
postdep_objects=$lt_[]_LT_AC_TAGVAR(postdep_objects, $1)
# Dependencies to place before the objects being linked to create a
# Dependencies to place before the objects being linked to create a
# shared library.
# shared library.
...
@@ -4457,7 +4437,7 @@ postdeps=$lt_[]_LT_AC_TAGVAR(postdeps, $1)
...
@@ -4457,7 +4437,7 @@ postdeps=$lt_[]_LT_AC_TAGVAR(postdeps, $1)
# The library search path used internally by the compiler when linking
# The library search path used internally by the compiler when linking
# a shared library.
# a shared library.
compiler_lib_search_path=
\`echo
$lt_[]_LT_AC_TAGVAR(compiler_lib_search_path, $1)
| \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\`
compiler_lib_search_path=$lt_[]_LT_AC_TAGVAR(compiler_lib_search_path, $1)
# Method to check whether dependent libraries are shared objects.
# Method to check whether dependent libraries are shared objects.
deplibs_check_method=$lt_deplibs_check_method
deplibs_check_method=$lt_deplibs_check_method
...
@@ -4537,7 +4517,7 @@ variables_saved_for_relink="$variables_saved_for_relink"
...
@@ -4537,7 +4517,7 @@ variables_saved_for_relink="$variables_saved_for_relink"
link_all_deplibs=$_LT_AC_TAGVAR(link_all_deplibs, $1)
link_all_deplibs=$_LT_AC_TAGVAR(link_all_deplibs, $1)
# Compile-time system search path for libraries
# Compile-time system search path for libraries
sys_lib_search_path_spec=
\`echo
$lt_sys_lib_search_path_spec
| \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\`
sys_lib_search_path_spec=$lt_sys_lib_search_path_spec
# Run-time system search path for libraries
# Run-time system search path for libraries
sys_lib_dlsearch_path_spec=$lt_sys_lib_dlsearch_path_spec
sys_lib_dlsearch_path_spec=$lt_sys_lib_dlsearch_path_spec
...
@@ -6373,7 +6353,6 @@ do
...
@@ -6373,7 +6353,6 @@ do
done
done
done
done
done
done
IFS=$as_save_IFS
lt_ac_max=0
lt_ac_max=0
lt_ac_count=0
lt_ac_count=0
# Add /usr/xpg4/bin/sed as it is typically found on Solaris
# Add /usr/xpg4/bin/sed as it is typically found on Solaris
...
@@ -6406,7 +6385,6 @@ for lt_ac_sed in $lt_ac_sed_list /usr/xpg4/bin/sed; do
...
@@ -6406,7 +6385,6 @@ for lt_ac_sed in $lt_ac_sed_list /usr/xpg4/bin/sed; do
done
done
])
])
SED=$lt_cv_path_SED
SED=$lt_cv_path_SED
AC_SUBST([SED])
AC_MSG_RESULT([$SED])
AC_MSG_RESULT([$SED])
])
])
...
...
AMDiS/bin/Makefile.in
View file @
83ad8a9e
...
@@ -423,7 +423,6 @@ PACKAGE_VERSION = @PACKAGE_VERSION@
...
@@ -423,7 +423,6 @@ PACKAGE_VERSION = @PACKAGE_VERSION@
PATH_SEPARATOR
=
@PATH_SEPARATOR@
PATH_SEPARATOR
=
@PATH_SEPARATOR@
PETSC_DIR
=
@PETSC_DIR@
PETSC_DIR
=
@PETSC_DIR@
RANLIB
=
@RANLIB@
RANLIB
=
@RANLIB@
SED
=
@SED@
SET_MAKE
=
@SET_MAKE@
SET_MAKE
=
@SET_MAKE@
SHELL
=
@SHELL@
SHELL
=
@SHELL@
STRIP
=
@STRIP@
STRIP
=
@STRIP@
...
...
AMDiS/configure
View file @
83ad8a9e
This diff is collapsed.
Click to expand it.
AMDiS/libtool
View file @
83ad8a9e
...
@@ -30,10 +30,10 @@
...
@@ -30,10 +30,10 @@
# the same distribution terms that you use for the rest of that program.
# the same distribution terms that you use for the rest of that program.
# A sed program that does not truncate output.
# A sed program that does not truncate output.
SED
=
"/bin/sed"
SED
=
"/
usr/
bin/sed"
# Sed that helps us avoid accidentally triggering echo(1) options like -n.
# Sed that helps us avoid accidentally triggering echo(1) options like -n.
Xsed
=
"/bin/sed -e 1s/^X//"
Xsed
=
"/
usr/
bin/sed -e 1s/^X//"
# The HP-UX ksh and POSIX shell print the target directory to stdout
# The HP-UX ksh and POSIX shell print the target directory to stdout
# if CDPATH is set.
# if CDPATH is set.
...
@@ -44,7 +44,7 @@ available_tags=" CXX F77"
...
@@ -44,7 +44,7 @@ available_tags=" CXX F77"
# ### BEGIN LIBTOOL CONFIG
# ### BEGIN LIBTOOL CONFIG
# Libtool was configured on host
NWRW15
:
# Libtool was configured on host
deimos101
:
# Shell to use when invoking shell scripts.
# Shell to use when invoking shell scripts.
SHELL
=
"/bin/sh"
SHELL
=
"/bin/sh"
...
@@ -66,12 +66,12 @@ fast_install=yes
...
@@ -66,12 +66,12 @@ fast_install=yes
# The host system.
# The host system.
host_alias
=
host_alias
=
host
=
i686-pc
-linux-gnu
host
=
x86_64-unknown
-linux-gnu
host_os
=
linux-gnu
host_os
=
linux-gnu
# The build system.
# The build system.
build_alias
=
build_alias
=
build
=
i686-pc
-linux-gnu
build
=
x86_64-unknown
-linux-gnu
build_os
=
linux-gnu
build_os
=
linux-gnu
# An echo program that does not interpret backslashes.
# An echo program that does not interpret backslashes.
...
@@ -82,25 +82,22 @@ AR="ar"
...
@@ -82,25 +82,22 @@ AR="ar"
AR_FLAGS
=
"cru"
AR_FLAGS
=
"cru"
# A C compiler.
# A C compiler.
LTCC
=
"
g
cc"
LTCC
=
"
/licsoft/libraries/openmpi/1.2.6/64bit/bin/mpi
cc"
# LTCC compiler flags.
# LTCC compiler flags.
LTCFLAGS
=
"-g -O2"
LTCFLAGS
=
"-g -O2"
# A language-specific compiler.
# A language-specific compiler.
CC
=
"
g
cc"
CC
=
"
/licsoft/libraries/openmpi/1.2.6/64bit/bin/mpi
cc"
# Is the compiler the GNU C compiler?
# Is the compiler the GNU C compiler?
with_gcc
=
yes
with_gcc
=
yes
gcc_dir
=
`
gcc
-print-file-name
=
.
| /bin/sed
's,/\.$,,'
`
gcc_ver
=
`
gcc
-dumpversion
`
# An ERE matcher.
# An ERE matcher.
EGREP
=
"grep -E"
EGREP
=
"grep -E"
# The linker used to build libraries.
# The linker used to build libraries.
LD
=
"/usr/
bin/ld
"
LD
=
"/usr/
x86_64-suse-linux/bin/ld -m elf_x86_64
"
# Whether we need hard or soft links.
# Whether we need hard or soft links.
LN_S
=
"ln -s"
LN_S
=
"ln -s"
...
@@ -174,7 +171,7 @@ dlopen_self=unknown
...
@@ -174,7 +171,7 @@ dlopen_self=unknown
dlopen_self_static
=
unknown
dlopen_self_static
=
unknown
# Compiler flag to prevent dynamic linking.
# Compiler flag to prevent dynamic linking.
link_static_flag
=
"
-static
"
link_static_flag
=
""
# Compiler flag to turn off builtin functions.
# Compiler flag to turn off builtin functions.
no_builtin_flag
=
" -fno-builtin"
no_builtin_flag
=
" -fno-builtin"
...
@@ -232,11 +229,11 @@ striplib="strip --strip-unneeded"
...
@@ -232,11 +229,11 @@ striplib="strip --strip-unneeded"
# Dependencies to place before the objects being linked to create a
# Dependencies to place before the objects being linked to create a
# shared library.
# shared library.
predep_objects
=
`
echo
""
|
$SED
-e
"s@
${
gcc_dir
}
@
\$
{gcc_dir}@g;s@
${
gcc_ver
}
@
\$
{gcc_ver}@g"
`
predep_objects
=
""
# Dependencies to place after the objects being linked to create a
# Dependencies to place after the objects being linked to create a
# shared library.
# shared library.
postdep_objects
=
`
echo
""
|
$SED
-e
"s@
${
gcc_dir
}
@
\$
{gcc_dir}@g;s@
${
gcc_ver
}
@
\$
{gcc_ver}@g"
`
postdep_objects
=
""
# Dependencies to place before the objects being linked to create a
# Dependencies to place before the objects being linked to create a
# shared library.
# shared library.
...
@@ -248,7 +245,7 @@ postdeps=""
...
@@ -248,7 +245,7 @@ postdeps=""
# The library search path used internally by the compiler when linking
# The library search path used internally by the compiler when linking
# a shared library.
# a shared library.
compiler_lib_search_path
=
`
echo
""
|
$SED
-e
"s@
${
gcc_dir
}
@
\$
{gcc_dir}@g;s@
${
gcc_ver
}
@
\$
{gcc_ver}@g"
`
compiler_lib_search_path
=
""
# Method to check whether dependent libraries are shared objects.
# Method to check whether dependent libraries are shared objects.
deplibs_check_method
=
"pass_all"
deplibs_check_method
=
"pass_all"
...
@@ -328,10 +325,10 @@ variables_saved_for_relink="PATH LD_LIBRARY_PATH LD_RUN_PATH GCC_EXEC_PREFIX COM
...
@@ -328,10 +325,10 @@ variables_saved_for_relink="PATH LD_LIBRARY_PATH LD_RUN_PATH GCC_EXEC_PREFIX COM
link_all_deplibs
=
unknown
link_all_deplibs
=
unknown
# Compile-time system search path for libraries
# Compile-time system search path for libraries
sys_lib_search_path_spec
=
`
echo
" /u/witkowski/local/lib/i386-redhat
-linux/4.1.2/ /
u/witkowski
/local/lib/ /usr/lib/gcc/
i386-redhat
-linux/4.1.2/ /usr/lib/gcc/
i386-redhat
-linux/4.1.2/ /usr/lib/gcc/
i386-redhat
-linux/4.1.2/../../../../
i386-redhat-linux/lib/i386-redhat
-linux/4.1.2/ /usr/lib/gcc/
i386-redhat
-linux/4.1.2/../../../../
i386-redhat
-linux/lib/ /usr/lib/gcc/
i386-redhat
-linux/4.1.2/../../../
i386-redhat
-linux/4.1.2/ /usr/lib/gcc/
i386-redhat
-linux/4.1.2/../../../
/lib
/i386-redhat
-linux/4.1.2/ /lib/ /usr/lib/
i386-redhat
-linux/4.1.2/ /usr/lib/
"
|
$SED
-e
"s@
${
gcc_dir
}
@
\$
{gcc_dir}@g;s@
${
gcc_ver
}
@
\$
{gcc_ver}@g"
`
sys_lib_search_path_spec
=
" /fastfs/wir/local/lib/x86_64-suse
-linux/4.1.2/ /
fastfs/wir
/local/lib/
../lib64/
/usr/lib
64
/gcc/
x86_64-suse
-linux/4.1.2/ /usr/lib/gcc/
x86_64-suse
-linux/4.1.2/ /usr/lib
64
/gcc/
x86_64-suse
-linux/4.1.2/../../../../
x86_64-suse-linux/lib/x86_64-suse
-linux/4.1.2/ /usr/lib
64
/gcc/
x86_64-suse
-linux/4.1.2/../../../../
x86_64-suse
-linux/lib/
../lib64/
/usr/lib
64
/gcc/
x86_64-suse
-linux/4.1.2/../../../
x86_64-suse
-linux/4.1.2/ /usr/lib
64
/gcc/
x86_64-suse
-linux/4.1.2/../../../
..
/lib
64/ /lib/x86_64-suse
-linux/4.1.2/ /lib/
../lib64/
/usr/lib/
x86_64-suse
-linux/4.1.2/ /usr/lib/
../lib64/ /fastfs/wir/local/lib/ /usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../../x86_64-suse-linux/lib/ /usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../ /lib/ /usr/lib/"
# Run-time system search path for libraries
# Run-time system search path for libraries
sys_lib_dlsearch_path_spec
=
"/lib /usr/lib /usr/
lib/octave-2.9.9 /usr/lib/qt-3.3/lib /usr/lib/qt4/lib /usr/lib/xulrunner-1.9.2
"
sys_lib_dlsearch_path_spec
=
"/lib /usr/lib /usr/
X11R6/lib64/Xaw3d /usr/X11R6/lib64 /usr/X11R6/lib/Xaw3d /usr/X11R6/lib /usr/x86_64-suse-linux/lib /usr/local/lib64 /usr/local/lib /opt/kde3/lib64 /opt/kde3/lib /opt/gnome/lib64 /opt/gnome/lib /lib64 /lib /usr/lib64 /usr/lib /opt/cluster/intel/cce/9.1.042/lib /opt/cluster/intel/fce/9.1.036/lib /opt/cluster/Pathscale3.0/lib/2.9.99 /opt/cluster/Pathscale3.0/lib/2.9.99/32 /work/licsoft/compilers/pgi/linux86-64/6.2/lib /work/licsoft/compilers/pgi/linux86-64/6.2/libso
"
# Fix the shell variable $srcfile for the compiler.
# Fix the shell variable $srcfile for the compiler.
fix_srcfile_path
=
""
fix_srcfile_path
=
""
...
@@ -6763,7 +6760,7 @@ build_old_libs=`case $build_libtool_libs in yes) $echo no;; *) $echo yes;; esac`
...
@@ -6763,7 +6760,7 @@ build_old_libs=`case $build_libtool_libs in yes) $echo no;; *) $echo yes;; esac`
# End:
# End:
# ### BEGIN LIBTOOL TAG CONFIG: CXX
# ### BEGIN LIBTOOL TAG CONFIG: CXX
# Libtool was configured on host
NWRW15
:
# Libtool was configured on host
deimos101
:
# Shell to use when invoking shell scripts.
# Shell to use when invoking shell scripts.
SHELL
=
"/bin/sh"
SHELL
=
"/bin/sh"
...
@@ -6785,12 +6782,12 @@ fast_install=yes
...
@@ -6785,12 +6782,12 @@ fast_install=yes
# The host system.
# The host system.
host_alias
=
host_alias
=
host
=
i686-pc
-linux-gnu
host
=
x86_64-unknown
-linux-gnu
host_os
=
linux-gnu
host_os
=
linux-gnu
# The build system.
# The build system.
build_alias
=
build_alias
=
build
=
i686-pc
-linux-gnu
build
=
x86_64-unknown
-linux-gnu
build_os
=
linux-gnu
build_os
=
linux-gnu
# An echo program that does not interpret backslashes.
# An echo program that does not interpret backslashes.
...
@@ -6801,25 +6798,22 @@ AR="ar"
...
@@ -6801,25 +6798,22 @@ AR="ar"
AR_FLAGS
=
"cru"
AR_FLAGS
=
"cru"
# A C compiler.
# A C compiler.
LTCC
=
"
g
cc"
LTCC
=
"
/licsoft/libraries/openmpi/1.2.6/64bit/bin/mpi
cc"
# LTCC compiler flags.
# LTCC compiler flags.
LTCFLAGS
=
"-g -O2"
LTCFLAGS
=
"-g -O2"
# A language-specific compiler.
# A language-specific compiler.
CC
=
"
g++
"
CC
=
"
/licsoft/libraries/openmpi/1.2.6/64bit/bin/mpicxx
"
# Is the compiler the GNU C compiler?
# Is the compiler the GNU C compiler?
with_gcc
=
yes
with_gcc
=
yes
gcc_dir
=
`
gcc
-print-file-name
=
.
| /bin/sed
's,/\.$,,'
`
gcc_ver
=
`
gcc
-dumpversion
`
# An ERE matcher.
# An ERE matcher.
EGREP
=
"grep -E"
EGREP
=
"grep -E"
# The linker used to build libraries.
# The linker used to build libraries.
LD
=
"/usr/
bin/ld
"
LD
=
"/usr/
x86_64-suse-linux/bin/ld -m elf_x86_64
"
# Whether we need hard or soft links.
# Whether we need hard or soft links.
LN_S
=
"ln -s"
LN_S
=
"ln -s"
...
@@ -6893,7 +6887,7 @@ dlopen_self=unknown
...
@@ -6893,7 +6887,7 @@ dlopen_self=unknown
dlopen_self_static
=
unknown
dlopen_self_static
=
unknown
# Compiler flag to prevent dynamic linking.
# Compiler flag to prevent dynamic linking.
link_static_flag
=
"
-static
"
link_static_flag
=
""
# Compiler flag to turn off builtin functions.
# Compiler flag to turn off builtin functions.
no_builtin_flag
=
" -fno-builtin"
no_builtin_flag
=
" -fno-builtin"
...
@@ -6948,11 +6942,11 @@ striplib="strip --strip-unneeded"
...
@@ -6948,11 +6942,11 @@ striplib="strip --strip-unneeded"
# Dependencies to place before the objects being linked to create a
# Dependencies to place before the objects being linked to create a
# shared library.
# shared library.
predep_objects
=
`
echo
"/usr/lib/gcc/
i386-redhat
-linux/4.1.2/../../../crti.o /usr/lib/gcc/
i386-redhat
-linux/4.1.2/crtbeginS.o"
|
$SED
-e
"s@
${
gcc_dir
}
@
\$
{gcc_dir}@g;s@
${
gcc_ver
}
@
\$
{gcc_ver}@g"
`
predep_objects
=
"/usr/lib
64
/gcc/
x86_64-suse
-linux/4.1.2/../../../
../lib64/
crti.o /usr/lib
64
/gcc/
x86_64-suse
-linux/4.1.2/crtbeginS.o"
# Dependencies to place after the objects being linked to create a
# Dependencies to place after the objects being linked to create a
# shared library.
# shared library.
postdep_objects
=
`
echo
"/usr/lib/gcc/
i386-redhat
-linux/4.1.2/crtendS.o /usr/lib/gcc/
i386-redhat
-linux/4.1.2/../../../
crtn.o"
|
$SED
-e
"s@
${
gcc_dir
}
@
\$
{gcc_dir}@g;s@
${
gcc_ver
}
@
\$
{gcc_ver}@g"
`
postdep_objects
=
"/usr/lib
64
/gcc/
x86_64-suse
-linux/4.1.2/crtendS.o /usr/lib
64
/gcc/
x86_64-suse
-linux/4.1.2/../../../
../lib64/crtn.o"
# Dependencies to place before the objects being linked to create a
# Dependencies to place before the objects being linked to create a
# shared library.
# shared library.
...
@@ -6960,11 +6954,11 @@ predeps=""
...
@@ -6960,11 +6954,11 @@ predeps=""
# Dependencies to place after the objects being linked to create a
# Dependencies to place after the objects being linked to create a
# shared library.
# shared library.
postdeps
=
"-lstdc++ -lm -lgcc_s -lc -lgcc_s"
postdeps
=
"
-lmpi_cxx -lmpi -lopen-rte -lopen-pal -libverbs -lrt -lnuma -ldl -lnsl -lutil -ldl
-lstdc++ -lm -lgcc_s
-lpthread
-lc -lgcc_s"
# The library search path used internally by the compiler when linking
# The library search path used internally by the compiler when linking
# a shared library.
# a shared library.
compiler_lib_search_path
=
`
echo
"-L/u/witkowski/local
/lib -L/usr/lib/gcc/
i386-redhat
-linux/4.1.2 -L/usr/lib/gcc/
i386-redhat
-linux/4.1.2
-L/usr/lib/gcc/i386-redhat-linux/4.1.2/../../.."
|
$SED
-e
"s@
${
gcc_dir
}
@
\$
{gcc_dir}@g;s@
${
gcc_ver
}
@
\$
{gcc_ver}@g"
`
compiler_lib_search_path
=
"-L/usr/lib64 -L/licsoft/libraries/openmpi/1.2.6/64bit
/lib -L/usr/lib
64
/gcc/
x86_64-suse
-linux/4.1.2 -L/usr/lib
64
/gcc/
x86_64-suse
-linux/4.1.2
/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/fastfs/wir/local/lib -L/usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../../x86_64-suse-linux/lib -L/usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../.."
# Method to check whether dependent libraries are shared objects.
# Method to check whether dependent libraries are shared objects.
deplibs_check_method
=
"pass_all"
deplibs_check_method
=
"pass_all"
...
@@ -7044,10 +7038,10 @@ variables_saved_for_relink="PATH LD_LIBRARY_PATH LD_RUN_PATH GCC_EXEC_PREFIX COM
...
@@ -7044,10 +7038,10 @@ variables_saved_for_relink="PATH LD_LIBRARY_PATH LD_RUN_PATH GCC_EXEC_PREFIX COM
link_all_deplibs
=
unknown
link_all_deplibs
=
unknown
# Compile-time system search path for libraries
# Compile-time system search path for libraries
sys_lib_search_path_spec
=
`
echo
" /u/witkowski/local/lib/i386-redhat
-linux/4.1.2/ /
u/witkowski
/local/lib/ /usr/lib/gcc/
i386-redhat
-linux/4.1.2/ /usr/lib/gcc/
i386-redhat
-linux/4.1.2/ /usr/lib/gcc/
i386-redhat
-linux/4.1.2/../../../../
i386-redhat-linux/lib/i386-redhat
-linux/4.1.2/ /usr/lib/gcc/
i386-redhat
-linux/4.1.2/../../../../
i386-redhat
-linux/lib/ /usr/lib/gcc/
i386-redhat
-linux/4.1.2/../../../
i386-redhat
-linux/4.1.2/ /usr/lib/gcc/
i386-redhat
-linux/4.1.2/../../../
/lib
/i386-redhat
-linux/4.1.2/ /lib/ /usr/lib/
i386-redhat
-linux/4.1.2/ /usr/lib/
"
|
$SED
-e
"s@
${
gcc_dir
}
@
\$
{gcc_dir}@g;s@
${
gcc_ver
}
@
\$
{gcc_ver}@g"
`
sys_lib_search_path_spec
=
" /fastfs/wir/local/lib/x86_64-suse
-linux/4.1.2/ /
fastfs/wir
/local/lib/
../lib64/
/usr/lib
64
/gcc/
x86_64-suse
-linux/4.1.2/ /usr/lib/gcc/
x86_64-suse
-linux/4.1.2/ /usr/lib
64
/gcc/
x86_64-suse
-linux/4.1.2/../../../../
x86_64-suse-linux/lib/x86_64-suse
-linux/4.1.2/ /usr/lib
64
/gcc/
x86_64-suse
-linux/4.1.2/../../../../
x86_64-suse
-linux/lib/
../lib64/
/usr/lib
64
/gcc/
x86_64-suse
-linux/4.1.2/../../../
x86_64-suse
-linux/4.1.2/ /usr/lib
64
/gcc/
x86_64-suse
-linux/4.1.2/../../../
..
/lib
64/ /lib/x86_64-suse
-linux/4.1.2/ /lib/
../lib64/
/usr/lib/
x86_64-suse
-linux/4.1.2/ /usr/lib/
../lib64/ /fastfs/wir/local/lib/ /usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../../x86_64-suse-linux/lib/ /usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../ /lib/ /usr/lib/"
# Run-time system search path for libraries
# Run-time system search path for libraries
sys_lib_dlsearch_path_spec
=
"/lib /usr/lib /usr/
lib/octave-2.9.9 /usr/lib/qt-3.3/lib /usr/lib/qt4/lib /usr/lib/xulrunner-1.9.2
"
sys_lib_dlsearch_path_spec
=
"/lib /usr/lib /usr/
X11R6/lib64/Xaw3d /usr/X11R6/lib64 /usr/X11R6/lib/Xaw3d /usr/X11R6/lib /usr/x86_64-suse-linux/lib /usr/local/lib64 /usr/local/lib /opt/kde3/lib64 /opt/kde3/lib /opt/gnome/lib64 /opt/gnome/lib /lib64 /lib /usr/lib64 /usr/lib /opt/cluster/intel/cce/9.1.042/lib /opt/cluster/intel/fce/9.1.036/lib /opt/cluster/Pathscale3.0/lib/2.9.99 /opt/cluster/Pathscale3.0/lib/2.9.99/32 /work/licsoft/compilers/pgi/linux86-64/6.2/lib /work/licsoft/compilers/pgi/linux86-64/6.2/libso
"
# Fix the shell variable $srcfile for the compiler.
# Fix the shell variable $srcfile for the compiler.
fix_srcfile_path
=
""
fix_srcfile_path
=
""
...
@@ -7071,7 +7065,7 @@ include_expsyms=""
...
@@ -7071,7 +7065,7 @@ include_expsyms=""
# ### BEGIN LIBTOOL TAG CONFIG: F77
# ### BEGIN LIBTOOL TAG CONFIG: F77
# Libtool was configured on host
NWRW15
:
# Libtool was configured on host
deimos101
:
# Shell to use when invoking shell scripts.
# Shell to use when invoking shell scripts.
SHELL
=
"/bin/sh"
SHELL
=
"/bin/sh"
...
@@ -7093,12 +7087,12 @@ fast_install=yes
...
@@ -7093,12 +7087,12 @@ fast_install=yes
# The host system.
# The host system.
host_alias
=
host_alias
=
host
=
i686-pc
-linux-gnu
host
=
x86_64-unknown
-linux-gnu
host_os
=
linux-gnu
host_os
=
linux-gnu
# The build system.
# The build system.
build_alias
=
build_alias
=
build
=
i686-pc
-linux-gnu
build
=
x86_64-unknown
-linux-gnu
build_os
=
linux-gnu
build_os
=
linux-gnu
# An echo program that does not interpret backslashes.
# An echo program that does not interpret backslashes.
...
@@ -7109,7 +7103,7 @@ AR="ar"
...
@@ -7109,7 +7103,7 @@ AR="ar"
AR_FLAGS
=
"cru"
AR_FLAGS
=
"cru"
# A C compiler.
# A C compiler.
LTCC
=
"
g
cc"
LTCC
=
"
/licsoft/libraries/openmpi/1.2.6/64bit/bin/mpi
cc"
# LTCC compiler flags.
# LTCC compiler flags.
LTCFLAGS
=
"-g -O2"
LTCFLAGS
=
"-g -O2"
...
@@ -7118,16 +7112,13 @@ LTCFLAGS="-g -O2"
...
@@ -7118,16 +7112,13 @@ LTCFLAGS="-g -O2"
CC
=
"g77"
CC
=
"g77"
# Is the compiler the GNU C compiler?
# Is the compiler the GNU C compiler?
with_gcc
=
yes
with_gcc
=
gcc_dir
=
`
gcc
-print-file-name
=
.
| /bin/sed
's,/\.$,,'
`
gcc_ver
=
`
gcc
-dumpversion
`
# An ERE matcher.
# An ERE matcher.
EGREP
=
"grep -E"
EGREP
=
"grep -E"
# The linker used to build libraries.
# The linker used to build libraries.
LD
=
"/usr/
bin/ld
"
LD
=
"/usr/
x86_64-suse-linux/bin/ld -m elf_x86_64
"
# Whether we need hard or soft links.
# Whether we need hard or soft links.
LN_S
=
"ln -s"
LN_S
=
"ln -s"
...
@@ -7259,11 +7250,11 @@ striplib="strip --strip-unneeded"
...
@@ -7259,11 +7250,11 @@ striplib="strip --strip-unneeded"
# Dependencies to place before the objects being linked to create a
# Dependencies to place before the objects being linked to create a
# shared library.
# shared library.
predep_objects
=
`
echo
""
|
$SED
-e
"s@
${
gcc_dir
}
@
\$
{gcc_dir}@g;s@
${
gcc_ver
}
@
\$
{gcc_ver}@g"
`
predep_objects
=
""
# Dependencies to place after the objects being linked to create a
# Dependencies to place after the objects being linked to create a
# shared library.
# shared library.
postdep_objects
=
`
echo
""
|
$SED
-e
"s@
${
gcc_dir
}
@
\$
{gcc_dir}@g;s@
${
gcc_ver
}
@
\$
{gcc_ver}@g"
`
postdep_objects
=
""
# Dependencies to place before the objects being linked to create a
# Dependencies to place before the objects being linked to create a
# shared library.
# shared library.
...
@@ -7275,7 +7266,7 @@ postdeps=""
...
@@ -7275,7 +7266,7 @@ postdeps=""
# The library search path used internally by the compiler when linking
# The library search path used internally by the compiler when linking
# a shared library.
# a shared library.
compiler_lib_search_path
=
`
echo
""
|
$SED
-e
"s@
${
gcc_dir
}
@
\$
{gcc_dir}@g;s@
${
gcc_ver
}
@
\$
{gcc_ver}@g"
`
compiler_lib_search_path
=
""
# Method to check whether dependent libraries are shared objects.
# Method to check whether dependent libraries are shared objects.
deplibs_check_method
=
"pass_all"
deplibs_check_method
=
"pass_all"
...
@@ -7355,10 +7346,10 @@ variables_saved_for_relink="PATH LD_LIBRARY_PATH LD_RUN_PATH GCC_EXEC_PREFIX COM
...
@@ -7355,10 +7346,10 @@ variables_saved_for_relink="PATH LD_LIBRARY_PATH LD_RUN_PATH GCC_EXEC_PREFIX COM
link_all_deplibs
=
unknown
link_all_deplibs
=
unknown
# Compile-time system search path for libraries
# Compile-time system search path for libraries
sys_lib_search_path_spec
=
`
echo
" /u/witkowski/local/lib/i386-redhat-linux/3.4.6/ /u/witkowski
/local/lib/ /usr/lib/gcc
/i386-redhat
-linux/3.
4.6
/ /usr/lib/gcc/
i386-redhat
-linux/3.
4.6
/ /usr/lib/gcc
/i386-redhat
-linux/3.
4.6
/../../../../
i386-redhat-linux/lib/i386-redhat
-linux/3.
4.6
/ /usr/lib/gcc
/i386-redhat
-linux/3.
4.6
/../../../../
i386-redhat
-linux/lib/ /usr/lib/gcc
/i386-redhat
-linux/3.
4.6
/../../../
i386-redhat
-linux/3.
4.6
/ /usr/lib/gcc
/i386-redhat
-linux/3.
4.6
/../../../ /lib/
i386-redhat
-linux/3.
4.6
/ /lib/ /usr/lib/
i386-redhat
-linux/3.
4.6
/ /usr/lib/"
|
$SED
-e
"s@
${
gcc_dir
}
@
\$
{gcc_dir}@g;s@
${
gcc_ver
}
@
\$
{gcc_ver}@g"
`
sys_lib_search_path_spec
=
" /fastfs/wir/local/lib/x86_64-suse-linux/3.3.5/ /fastfs/wir
/local/lib/ /usr/lib
64
/gcc
-lib/x86_64-suse
-linux/3.
3.5
/ /usr/lib/gcc/
x86_64-suse
-linux/3.
3.5
/ /usr/lib
64
/gcc
-lib/x86_64-suse
-linux/3.
3.5
/../../../../
x86_64-suse-linux/lib/x86_64-suse
-linux/3.
3.5
/ /usr/lib
64
/gcc
-lib/x86_64-suse
-linux/3.
3.5
/../../../../
x86_64-suse
-linux/lib/ /usr/lib
64
/gcc
-lib/x86_64-suse
-linux/3.
3.5
/../../../
x86_64-suse
-linux/3.
3.5
/ /usr/lib
64
/gcc
-lib/x86_64-suse
-linux/3.
3.5
/../../../ /lib/
x86_64-suse
-linux/3.
3.5
/ /lib/ /usr/lib/
x86_64-suse
-linux/3.
3.5
/ /usr/lib/"
# Run-time system search path for libraries
# Run-time system search path for libraries
sys_lib_dlsearch_path_spec
=
"/lib /usr/lib /usr/
lib/octave-2.9.9 /usr/lib/qt-3.3/lib /usr/lib/qt4/lib /usr/lib/xulrunner-1.9.2
"
sys_lib_dlsearch_path_spec
=
"/lib /usr/lib /usr/
X11R6/lib64/Xaw3d /usr/X11R6/lib64 /usr/X11R6/lib/Xaw3d /usr/X11R6/lib /usr/x86_64-suse-linux/lib /usr/local/lib64 /usr/local/lib /opt/kde3/lib64 /opt/kde3/lib /opt/gnome/lib64 /opt/gnome/lib /lib64 /lib /usr/lib64 /usr/lib /opt/cluster/intel/cce/9.1.042/lib /opt/cluster/intel/fce/9.1.036/lib /opt/cluster/Pathscale3.0/lib/2.9.99 /opt/cluster/Pathscale3.0/lib/2.9.99/32 /work/licsoft/compilers/pgi/linux86-64/6.2/lib /work/licsoft/compilers/pgi/linux86-64/6.2/libso
"
# Fix the shell variable $srcfile for the compiler.
# Fix the shell variable $srcfile for the compiler.
fix_srcfile_path
=
""
fix_srcfile_path
=
""
...
...
AMDiS/src/Element.cc
View file @
83ad8a9e
...
@@ -479,6 +479,8 @@ namespace AMDiS {
...
@@ -479,6 +479,8 @@ namespace AMDiS {
int
nodes
;
int
nodes
;
SerUtil
::
deserialize
(
in
,
nodes
);
SerUtil
::
deserialize
(
in
,
nodes
);
TEST_EXIT_DBG
(
nodes
>
0
)(
"Should not happen!
\n
"
);
dof
=
new
DegreeOfFreedom
*
[
nodes
];
dof
=
new
DegreeOfFreedom
*
[
nodes
];
for
(
int
i
=
0
;
i
<
nodes
;
i
++
)
{
for
(
int
i
=
0
;
i
<
nodes
;
i
++
)
{
...
...
AMDiS/src/Mesh.cc
View file @
83ad8a9e
...
@@ -927,11 +927,13 @@ namespace AMDiS {
...
@@ -927,11 +927,13 @@ namespace AMDiS {
diam
=
w
;
diam
=
w
;
}
}
void
Mesh
::
setDiameter
(
int
i
,
double
w
)
void
Mesh
::
setDiameter
(
int
i
,
double
w
)
{
{
diam
[
i
]
=
w
;
diam
[
i
]
=
w
;
}
}
void
Mesh
::
serialize
(
std
::
ostream
&
out
)
void
Mesh
::
serialize
(
std
::
ostream
&
out
)
{
{
serializedDOFs
.
clear
();
serializedDOFs
.
clear
();
...
@@ -1003,6 +1005,7 @@ namespace AMDiS {
...
@@ -1003,6 +1005,7 @@ namespace AMDiS {
serializedDOFs
.
clear
();
serializedDOFs
.
clear
();
}
}