From d13f34469065230dd86e63733e4dc8d1f775acfb Mon Sep 17 00:00:00 2001
From: Oliver Sander <oliver.sander@tu-dresden.de>
Date: Fri, 5 Jan 2024 16:20:07 +0100
Subject: [PATCH] Run uncrustify on all files, to make the new CI job pass
---
dune/gfe/assemblers/chiralskyrmionenergy.hh | 187 +-
.../gfe/assemblers/cosseratenergystiffness.hh | 791 ++++---
dune/gfe/assemblers/cosseratrodenergy.hh | 337 ++-
dune/gfe/assemblers/geodesicfeassembler.hh | 313 ++-
.../assemblers/geodesicfeassemblerwrapper.hh | 230 +--
dune/gfe/assemblers/harmonicenergy.hh | 73 +-
.../gfe/assemblers/l2distancesquaredenergy.hh | 1 -
dune/gfe/assemblers/localenergy.hh | 55 +-
dune/gfe/assemblers/localfirstordermodel.hh | 25 +-
.../localgeodesicfeadolcstiffness.hh | 521 +++--
.../assemblers/localgeodesicfefdstiffness.hh | 333 ++-
.../assemblers/localgeodesicfestiffness.hh | 55 +-
dune/gfe/assemblers/localintegralenergy.hh | 128 +-
dune/gfe/assemblers/mixedgfeassembler.hh | 507 +++--
.../mixedlocalgeodesicfestiffness.hh | 93 +-
.../assemblers/mixedlocalgfeadolcstiffness.hh | 803 ++++----
.../nonplanarcosseratshellenergy.hh | 75 +-
dune/gfe/assemblers/simofoxenergy.hh | 78 +-
dune/gfe/assemblers/sumenergy.hh | 68 +-
dune/gfe/assemblers/surfacecosseratenergy.hh | 672 +++---
.../surfacecosseratstressassembler.hh | 496 ++---
dune/gfe/assemblers/weightedsumenergy.hh | 3 +-
dune/gfe/averagedistanceassembler.hh | 162 +-
dune/gfe/averageinterface.hh | 1028 +++++-----
dune/gfe/cosseratstrain.hh | 46 +-
dune/gfe/cosseratvtkwriter.hh | 938 ++++-----
dune/gfe/coupling/rodcontinuumcomplex.hh | 212 +-
dune/gfe/coupling/rodcontinuumddstep.hh | 258 +--
.../coupling/rodcontinuumfixedpointstep.hh | 1082 +++++-----
.../rodcontinuumsteklovpoincarestep.hh | 1776 ++++++++--------
dune/gfe/densities/bulkcosseratdensity.hh | 228 +-
dune/gfe/densities/localdensity.hh | 48 +-
dune/gfe/embeddedglobalgfefunction.hh | 576 +++---
dune/gfe/filereader.hh | 40 +-
dune/gfe/geodesicdifference.hh | 16 +-
dune/gfe/geodesicfefunctionadaptor.hh | 152 +-
dune/gfe/geometries/moebiusstrip.hh | 168 +-
dune/gfe/geometries/twistedstrip.hh | 148 +-
dune/gfe/gfedifferencenormsquared.hh | 508 ++---
dune/gfe/globalgfefunction.hh | 818 ++++----
dune/gfe/gramschmidtsolver.hh | 2 +-
dune/gfe/linearalgebra.hh | 278 +--
dune/gfe/localgeodesicfefunction.hh | 1104 +++++-----
dune/gfe/localgfetestfunctionbasis.hh | 266 +--
dune/gfe/localprojectedfefunction.hh | 30 +-
dune/gfe/localquickanddirtyfefunction.hh | 6 +-
dune/gfe/localtangentfefunction.hh | 6 +-
dune/gfe/maxnormtrustregion.hh | 100 +-
dune/gfe/mixedriemanniantrsolver.cc | 898 ++++----
dune/gfe/mixedriemanniantrsolver.hh | 252 +--
dune/gfe/neumannenergy.hh | 128 +-
dune/gfe/parallel/globalmapper.hh | 4 +-
dune/gfe/parallel/globalp1mapper.hh | 4 +-
dune/gfe/parallel/globalp2mapper.hh | 52 +-
dune/gfe/parallel/matrixcommunicator.hh | 4 +-
dune/gfe/parallel/p2mapper.hh | 3 +-
dune/gfe/parallel/vectorcommunicator.hh | 6 +-
dune/gfe/polardecomposition.hh | 600 +++---
dune/gfe/riemannianpnsolver.cc | 832 ++++----
dune/gfe/riemannianpnsolver.hh | 206 +-
dune/gfe/riemanniantrsolver.cc | 1176 +++++------
dune/gfe/riemanniantrsolver.hh | 258 +--
dune/gfe/rodfactory.hh | 232 +--
dune/gfe/skewmatrix.hh | 162 +-
dune/gfe/spaces/hyperbolichalfspacepoint.hh | 974 ++++-----
dune/gfe/spaces/orthogonalmatrix.hh | 166 +-
dune/gfe/spaces/productmanifold.hh | 310 +--
dune/gfe/spaces/quaternion.hh | 286 +--
dune/gfe/spaces/realtuple.hh | 450 ++--
dune/gfe/spaces/rigidbodymotion.hh | 638 +++---
dune/gfe/spaces/rotation.hh | 1826 ++++++++---------
dune/gfe/spaces/unitvector.hh | 834 ++++----
dune/gfe/svd.hh | 416 ++--
dune/gfe/symmetricmatrix.hh | 36 +-
dune/gfe/targetspacertrsolver.cc | 148 +-
dune/gfe/targetspacertrsolver.hh | 68 +-
dune/gfe/tensor3.hh | 272 +--
dune/gfe/tensorssd.hh | 184 +-
dune/gfe/trustregionmmgbasesolver.hh | 106 +-
dune/gfe/vtkfile.hh | 4 +-
src/compute-disc-error.cc | 394 ++--
src/cosserat-continuum.cc | 979 ++++-----
src/film-on-substrate-stress-plot.cc | 97 +-
src/film-on-substrate.cc | 153 +-
src/gradient-flow.cc | 8 +-
src/harmonicmaps.cc | 394 ++--
src/rod3d.cc | 441 ++--
src/rodobstacle.cc | 477 ++---
src/simofoxshell.cc | 82 +-
test/adolctest-scalar-and-vector-mode.cc | 62 +-
test/adolctest.cc | 711 +++----
test/averagedistanceassemblertest.cc | 344 ++--
test/cosseratcontinuumtest.cc | 136 +-
test/cosseratenergytest.cc | 214 +-
test/cosseratrodenergytest.cc | 137 +-
test/cosseratrodtest.cc | 19 +-
test/geodesicfeassemblerwrappertest.cc | 86 +-
test/harmonicenergytest.cc | 132 +-
test/harmonicmaptest.cc | 32 +-
test/localgeodesicfefunctiontest.cc | 488 ++---
test/localgfetestfunctiontest.cc | 110 +-
test/localprojectedfefunctiontest.cc | 322 ++-
test/multiindex.hh | 66 +-
test/nonplanarcosseratenergytest.cc | 272 +--
test/orthogonalmatrixtest.cc | 134 +-
test/polardecompositiontest.cc | 358 ++--
test/rigidbodymotiontest.cc | 128 +-
test/rotationtest.cc | 367 ++--
test/surfacecosseratstressassemblertest.cc | 74 +-
test/svdtest.cc | 92 +-
test/targetspacetest.cc | 598 +++---
test/test-cylinder.cc | 156 +-
test/valuefactory.hh | 271 +--
113 files changed, 17870 insertions(+), 17839 deletions(-)
diff --git a/dune/gfe/assemblers/chiralskyrmionenergy.hh b/dune/gfe/assemblers/chiralskyrmionenergy.hh
index 059fa068..d3e02a67 100644
--- a/dune/gfe/assemblers/chiralskyrmionenergy.hh
+++ b/dune/gfe/assemblers/chiralskyrmionenergy.hh
@@ -8,122 +8,121 @@
namespace Dune {
-namespace GFE {
-
-/** \brief Energy of certain chiral Skyrmion
- *
- * The energy is discussed in:
- * - Christof Melcher, "Chiral skyrmions in the plane", Proc. of the Royal Society, online DOI DOI: 10.1098/rspa.2014.0394
- */
-template<class Basis, class LocalInterpolationRule, class field_type>
-class ChiralSkyrmionEnergy
-: public GFE::LocalEnergy<Basis,UnitVector<field_type,3> >
-{
- // various useful types
- typedef UnitVector<field_type,3> TargetSpace;
- typedef typename Basis::GridView GridView;
- typedef typename GridView::ctype DT;
- typedef typename TargetSpace::ctype RT;
- typedef typename GridView::template Codim<0>::Entity Entity;
-
- // some other sizes
- constexpr static int gridDim = GridView::dimension;
-
-public:
-
- ChiralSkyrmionEnergy(const Dune::ParameterTree& parameters)
- {
- h_ = parameters.template get<double>("h");
- kappa_ = parameters.template get<double>("kappa");
- }
-
- //! Dimension of a tangent space
- constexpr static int blocksize = TargetSpace::TangentVector::dimension;
-
- /** \brief Assemble the energy for a single element */
- RT energy (const typename Basis::LocalView& localView,
- const std::vector<TargetSpace>& localConfiguration) const override;
-
- field_type h_;
- field_type kappa_;
-};
-
-template <class Basis, class LocalInterpolationRule, class field_type>
-typename ChiralSkyrmionEnergy<Basis, LocalInterpolationRule, field_type>::RT
-ChiralSkyrmionEnergy<Basis, LocalInterpolationRule, field_type>::
-energy(const typename Basis::LocalView& localView,
- const std::vector<TargetSpace>& localConfiguration) const
-{
- typedef typename GridView::template Codim<0>::Entity::Geometry Geometry;
-
- RT energy = 0;
-
- const auto element = localView.element();
- const auto& localFiniteElement = localView.tree().finiteElement();
- LocalInterpolationRule localInterpolationRule(localFiniteElement,localConfiguration);
-
- int quadOrder = (element.type().isSimplex()) ? (localFiniteElement.localBasis().order()-1) * 2
+ namespace GFE {
+
+ /** \brief Energy of certain chiral Skyrmion
+ *
+ * The energy is discussed in:
+ * - Christof Melcher, "Chiral skyrmions in the plane", Proc. of the Royal Society, online DOI DOI: 10.1098/rspa.2014.0394
+ */
+ template<class Basis, class LocalInterpolationRule, class field_type>
+ class ChiralSkyrmionEnergy
+ : public GFE::LocalEnergy<Basis,UnitVector<field_type,3> >
+ {
+ // various useful types
+ typedef UnitVector<field_type,3> TargetSpace;
+ typedef typename Basis::GridView GridView;
+ typedef typename GridView::ctype DT;
+ typedef typename TargetSpace::ctype RT;
+ typedef typename GridView::template Codim<0>::Entity Entity;
+
+ // some other sizes
+ constexpr static int gridDim = GridView::dimension;
+
+ public:
+
+ ChiralSkyrmionEnergy(const Dune::ParameterTree& parameters)
+ {
+ h_ = parameters.template get<double>("h");
+ kappa_ = parameters.template get<double>("kappa");
+ }
+
+ //! Dimension of a tangent space
+ constexpr static int blocksize = TargetSpace::TangentVector::dimension;
+
+ /** \brief Assemble the energy for a single element */
+ RT energy (const typename Basis::LocalView& localView,
+ const std::vector<TargetSpace>& localConfiguration) const override;
+
+ field_type h_;
+ field_type kappa_;
+ };
+
+ template <class Basis, class LocalInterpolationRule, class field_type>
+ typename ChiralSkyrmionEnergy<Basis, LocalInterpolationRule, field_type>::RT
+ ChiralSkyrmionEnergy<Basis, LocalInterpolationRule, field_type>::
+ energy(const typename Basis::LocalView& localView,
+ const std::vector<TargetSpace>& localConfiguration) const
+ {
+ typedef typename GridView::template Codim<0>::Entity::Geometry Geometry;
+
+ RT energy = 0;
+
+ const auto element = localView.element();
+ const auto& localFiniteElement = localView.tree().finiteElement();
+ LocalInterpolationRule localInterpolationRule(localFiniteElement,localConfiguration);
+
+ int quadOrder = (element.type().isSimplex()) ? (localFiniteElement.localBasis().order()-1) * 2
: localFiniteElement.localBasis().order() * 2 * gridDim;
- const Dune::QuadratureRule<double, gridDim>& quad
- = Dune::QuadratureRules<double, gridDim>::rule(element.type(), quadOrder);
+ const Dune::QuadratureRule<double, gridDim>& quad
+ = Dune::QuadratureRules<double, gridDim>::rule(element.type(), quadOrder);
- for (size_t pt=0; pt<quad.size(); pt++) {
+ for (size_t pt=0; pt<quad.size(); pt++) {
- // Local position of the quadrature point
- const Dune::FieldVector<double,gridDim>& quadPos = quad[pt].position();
+ // Local position of the quadrature point
+ const Dune::FieldVector<double,gridDim>& quadPos = quad[pt].position();
- const double integrationElement = element.geometry().integrationElement(quadPos);
+ const double integrationElement = element.geometry().integrationElement(quadPos);
- const typename Geometry::JacobianInverseTransposed& jacobianInverseTransposed = element.geometry().jacobianInverseTransposed(quadPos);
+ const typename Geometry::JacobianInverseTransposed& jacobianInverseTransposed = element.geometry().jacobianInverseTransposed(quadPos);
- double weight = quad[pt].weight() * integrationElement;
+ double weight = quad[pt].weight() * integrationElement;
- // The value of the function
- auto value = localInterpolationRule.evaluate(quadPos);
+ // The value of the function
+ auto value = localInterpolationRule.evaluate(quadPos);
- // The derivative of the local function defined on the reference element
- typename LocalInterpolationRule::DerivativeType referenceDerivative = localInterpolationRule.evaluateDerivative(quadPos,value);
+ // The derivative of the local function defined on the reference element
+ typename LocalInterpolationRule::DerivativeType referenceDerivative = localInterpolationRule.evaluateDerivative(quadPos,value);
- // The derivative of the function defined on the actual element
- typename LocalInterpolationRule::DerivativeType derivative(0);
+ // The derivative of the function defined on the actual element
+ typename LocalInterpolationRule::DerivativeType derivative(0);
- for (size_t comp=0; comp<referenceDerivative.N(); comp++)
- jacobianInverseTransposed.umv(referenceDerivative[comp], derivative[comp]);
+ for (size_t comp=0; comp<referenceDerivative.N(); comp++)
+ jacobianInverseTransposed.umv(referenceDerivative[comp], derivative[comp]);
- //////////////////////////////////////////////////////////////
- // Exchange energy (aka harmonic energy)
- //////////////////////////////////////////////////////////////
- // The Frobenius norm is the correct norm here if the metric of TargetSpace is the identity.
- // (And if the metric of the domain space is the identity, which it always is here.)
- energy += weight * 0.5 * derivative.frobenius_norm2();
+ //////////////////////////////////////////////////////////////
+ // Exchange energy (aka harmonic energy)
+ //////////////////////////////////////////////////////////////
+ // The Frobenius norm is the correct norm here if the metric of TargetSpace is the identity.
+ // (And if the metric of the domain space is the identity, which it always is here.)
+ energy += weight * 0.5 * derivative.frobenius_norm2();
- //////////////////////////////////////////////////////////////
- // Dzyaloshinskii-Moriya interaction term
- //////////////////////////////////////////////////////////////
+ //////////////////////////////////////////////////////////////
+ // Dzyaloshinskii-Moriya interaction term
+ //////////////////////////////////////////////////////////////
- // derivative[a][b] contains the partial derivative of m_a in the direction x_b
- Dune::FieldVector<field_type, 3> curl = {derivative[2][1], -derivative[2][0], derivative[1][0]-derivative[0][1]};
+ // derivative[a][b] contains the partial derivative of m_a in the direction x_b
+ Dune::FieldVector<field_type, 3> curl = {derivative[2][1], -derivative[2][0], derivative[1][0]-derivative[0][1]};
- FieldVector<field_type, 3> v = value.globalCoordinates();
+ FieldVector<field_type, 3> v = value.globalCoordinates();
- energy += weight * kappa_ * (v * curl);
+ energy += weight * kappa_ * (v * curl);
- //////////////////////////////////////////////////////////////
- // Zeeman interaction term
- //////////////////////////////////////////////////////////////
- v[2] -= 1; // subtract e_3
- energy += weight * 0.5 * h_ * v.two_norm2();
+ //////////////////////////////////////////////////////////////
+ // Zeeman interaction term
+ //////////////////////////////////////////////////////////////
+ v[2] -= 1; // subtract e_3
+ energy += weight * 0.5 * h_ * v.two_norm2();
- }
+ }
- return energy;
-}
+ return energy;
+ }
-} // namespace GFE
+ } // namespace GFE
} // namespace Dune
#endif
-
diff --git a/dune/gfe/assemblers/cosseratenergystiffness.hh b/dune/gfe/assemblers/cosseratenergystiffness.hh
index 4e5eceee..3caffc35 100644
--- a/dune/gfe/assemblers/cosseratenergystiffness.hh
+++ b/dune/gfe/assemblers/cosseratenergystiffness.hh
@@ -47,8 +47,8 @@ class LocalFiniteElementFactory
{
public:
static auto get(const typename Basis::LocalView& localView,
- std::integral_constant<std::size_t, i> iType)
- -> decltype(localView.tree().child(iType,0).finiteElement())
+ std::integral_constant<std::size_t, i> iType)
+ -> decltype(localView.tree().child(iType,0).finiteElement())
{
return localView.tree().child(iType,0).finiteElement();
}
@@ -60,8 +60,8 @@ class LocalFiniteElementFactory<Dune::Functions::LagrangeBasis<GridView,order>,i
{
public:
static auto get(const typename Dune::Functions::LagrangeBasis<GridView,order>::LocalView& localView,
- std::integral_constant<std::size_t, i> iType)
- -> decltype(localView.tree().finiteElement())
+ std::integral_constant<std::size_t, i> iType)
+ -> decltype(localView.tree().finiteElement())
{
return localView.tree().finiteElement();
}
@@ -69,276 +69,276 @@ public:
template<class Basis, int dim, class field_type=double>
class CosseratEnergyLocalStiffness
- : public Dune::GFE::LocalEnergy<Basis,RigidBodyMotion<field_type,dim> >,
- public MixedLocalGeodesicFEStiffness<Basis,
- RealTuple<field_type,dim>,
- Rotation<field_type,dim> >
+ : public Dune::GFE::LocalEnergy<Basis,RigidBodyMotion<field_type,dim> >,
+ public MixedLocalGeodesicFEStiffness<Basis,
+ RealTuple<field_type,dim>,
+ Rotation<field_type,dim> >
{
- // grid types
- typedef typename Basis::GridView GridView;
- typedef typename GridView::ctype DT;
- typedef RigidBodyMotion<field_type,dim> TargetSpace;
- typedef typename TargetSpace::ctype RT;
- typedef typename GridView::template Codim<0>::Entity Entity;
-
- // some other sizes
- constexpr static int gridDim = GridView::dimension;
- constexpr static int dimworld = GridView::dimensionworld;
-
- /** \brief Compute the (row-wise) curl of a matrix R \f$
- \param DR The partial derivatives of the matrix R
- */
- static Dune::FieldMatrix<field_type,dim,dim> curl(const Tensor3<field_type,dim,dim,dim>& DR)
- {
- Dune::FieldMatrix<field_type,dim,dim> result;
-
- for (int i=0; i<dim; i++) {
- result[i][0] = DR[i][2][1] - DR[i][1][2];
- result[i][1] = DR[i][0][2] - DR[i][2][0];
- result[i][2] = DR[i][1][0] - DR[i][0][1];
- }
-
- return result;
+ // grid types
+ typedef typename Basis::GridView GridView;
+ typedef typename GridView::ctype DT;
+ typedef RigidBodyMotion<field_type,dim> TargetSpace;
+ typedef typename TargetSpace::ctype RT;
+ typedef typename GridView::template Codim<0>::Entity Entity;
+
+ // some other sizes
+ constexpr static int gridDim = GridView::dimension;
+ constexpr static int dimworld = GridView::dimensionworld;
+
+ /** \brief Compute the (row-wise) curl of a matrix R \f$
+ \param DR The partial derivatives of the matrix R
+ */
+ static Dune::FieldMatrix<field_type,dim,dim> curl(const Tensor3<field_type,dim,dim,dim>& DR)
+ {
+ Dune::FieldMatrix<field_type,dim,dim> result;
+
+ for (int i=0; i<dim; i++) {
+ result[i][0] = DR[i][2][1] - DR[i][1][2];
+ result[i][1] = DR[i][0][2] - DR[i][2][0];
+ result[i][2] = DR[i][1][0] - DR[i][0][1];
}
+ return result;
+ }
+
public:
- /** \brief Constructor with a set of material parameters
- * \param parameters The material parameters
- */
- CosseratEnergyLocalStiffness(const Dune::ParameterTree& parameters,
- const BoundaryPatch<GridView>* neumannBoundary,
- const std::function<Dune::FieldVector<double,3>(Dune::FieldVector<double,dimworld>)> neumannFunction,
- const std::function<Dune::FieldVector<double,3>(Dune::FieldVector<double,dimworld>)> volumeLoad)
+ /** \brief Constructor with a set of material parameters
+ * \param parameters The material parameters
+ */
+ CosseratEnergyLocalStiffness(const Dune::ParameterTree& parameters,
+ const BoundaryPatch<GridView>* neumannBoundary,
+ const std::function<Dune::FieldVector<double,3>(Dune::FieldVector<double,dimworld>)> neumannFunction,
+ const std::function<Dune::FieldVector<double,3>(Dune::FieldVector<double,dimworld>)> volumeLoad)
: neumannBoundary_(neumannBoundary),
- neumannFunction_(neumannFunction),
- volumeLoad_(volumeLoad)
- {
- // The shell thickness // only relevant for dim == 2
- thickness_ = parameters.template get<double>("thickness");
+ neumannFunction_(neumannFunction),
+ volumeLoad_(volumeLoad)
+ {
+ // The shell thickness // only relevant for dim == 2
+ thickness_ = parameters.template get<double>("thickness");
- // Lame constants
- mu_ = parameters.template get<double>("mu");
- lambda_ = parameters.template get<double>("lambda");
+ // Lame constants
+ mu_ = parameters.template get<double>("mu");
+ lambda_ = parameters.template get<double>("lambda");
- // Cosserat couple modulus
- mu_c_ = parameters.template get<double>("mu_c");
+ // Cosserat couple modulus
+ mu_c_ = parameters.template get<double>("mu_c");
- // Length scale parameter
- L_c_ = parameters.template get<double>("L_c");
+ // Length scale parameter
+ L_c_ = parameters.template get<double>("L_c");
- // Curvature exponent
- q_ = parameters.template get<double>("q");
+ // Curvature exponent
+ q_ = parameters.template get<double>("q");
- // Shear correction factor // only relevant for dim == 2
- kappa_ = parameters.template get<double>("kappa");
+ // Shear correction factor // only relevant for dim == 2
+ kappa_ = parameters.template get<double>("kappa");
- // Curvature parameters
- b1_ = parameters.template get<double>("b1");
- b2_ = parameters.template get<double>("b2");
- b3_ = parameters.template get<double>("b3");
- }
+ // Curvature parameters
+ b1_ = parameters.template get<double>("b1");
+ b2_ = parameters.template get<double>("b2");
+ b3_ = parameters.template get<double>("b3");
+ }
- /** \brief Assemble the energy for a single element */
- RT energy (const typename Basis::LocalView& localView,
- const std::vector<TargetSpace>& localSolution) const override;
-
- /** \brief Assemble the energy for a single element */
- RT energy (const typename Basis::LocalView& localView,
- const std::vector<RealTuple<field_type,dim> >& localDisplacementConfiguration,
- const std::vector<Rotation<field_type,dim> >& localOrientationConfiguration) const override;
-
- /** \brief The energy \f$ W_{mp}(\overline{U}) \f$, as written in
- * the first equation of (4.4) in Neff's paper from 2006: A geometrically exact planar Cosserat shell model with microstructure: Existence of minimizers for zero Cosserat couple modulus
- * OR: the equation (2.27) of 2019: Refined dimensional reduction for isotropic elastic Cosserat shells with initial curvature
- */
- RT quadraticMembraneEnergy(const Dune::GFE::CosseratStrain<field_type,3,gridDim>& U) const
- {
- Dune::FieldMatrix<field_type,3,3> UMinus1 = U.matrix();
- for (int i=0; i<dim; i++)
- UMinus1[i][i] -= 1;
-
- return mu_ * Dune::GFE::sym(UMinus1).frobenius_norm2()
- + mu_c_ * Dune::GFE::skew(UMinus1).frobenius_norm2()
+ /** \brief Assemble the energy for a single element */
+ RT energy (const typename Basis::LocalView& localView,
+ const std::vector<TargetSpace>& localSolution) const override;
+
+ /** \brief Assemble the energy for a single element */
+ RT energy (const typename Basis::LocalView& localView,
+ const std::vector<RealTuple<field_type,dim> >& localDisplacementConfiguration,
+ const std::vector<Rotation<field_type,dim> >& localOrientationConfiguration) const override;
+
+ /** \brief The energy \f$ W_{mp}(\overline{U}) \f$, as written in
+ * the first equation of (4.4) in Neff's paper from 2006: A geometrically exact planar Cosserat shell model with microstructure: Existence of minimizers for zero Cosserat couple modulus
+ * OR: the equation (2.27) of 2019: Refined dimensional reduction for isotropic elastic Cosserat shells with initial curvature
+ */
+ RT quadraticMembraneEnergy(const Dune::GFE::CosseratStrain<field_type,3,gridDim>& U) const
+ {
+ Dune::FieldMatrix<field_type,3,3> UMinus1 = U.matrix();
+ for (int i=0; i<dim; i++)
+ UMinus1[i][i] -= 1;
+
+ return mu_ * Dune::GFE::sym(UMinus1).frobenius_norm2()
+ + mu_c_ * Dune::GFE::skew(UMinus1).frobenius_norm2()
#ifdef QUADRATIC_2006
- + (mu_*lambda_)/(2*mu_ + lambda_) * Dune::GFE::traceSquared(UMinus1); // Dune::GFE::traceSquared(UMinus1) = Dune::GFE::traceSquared(Dune::GFE::sym(UMinus1))
+ + (mu_*lambda_)/(2*mu_ + lambda_) * Dune::GFE::traceSquared(UMinus1); // Dune::GFE::traceSquared(UMinus1) = Dune::GFE::traceSquared(Dune::GFE::sym(UMinus1))
#else
- + lambda_/2 * Dune::GFE::traceSquared(UMinus1); // Dune::GFE::traceSquared(UMinus1) = Dune::GFE::traceSquared(Dune::GFE::sym(UMinus1))
+ + lambda_/2 * Dune::GFE::traceSquared(UMinus1); // Dune::GFE::traceSquared(UMinus1) = Dune::GFE::traceSquared(Dune::GFE::sym(UMinus1))
#endif
- }
+ }
- /** \brief The energy \f$ W_{mp}(\overline{U}) \f$, as written in
- * the second equation of (4.4) in Neff's paper
- */
- RT longQuadraticMembraneEnergy(const Dune::GFE::CosseratStrain<field_type,3,gridDim>& U) const
- {
- RT result = 0;
+ /** \brief The energy \f$ W_{mp}(\overline{U}) \f$, as written in
+ * the second equation of (4.4) in Neff's paper
+ */
+ RT longQuadraticMembraneEnergy(const Dune::GFE::CosseratStrain<field_type,3,gridDim>& U) const
+ {
+ RT result = 0;
- // shear-stretch energy
- Dune::FieldMatrix<field_type,dim-1,dim-1> sym2x2;
- for (int i=0; i<dim-1; i++)
- for (int j=0; j<dim-1; j++)
- sym2x2[i][j] = 0.5 * (U.matrix()[i][j] + U.matrix()[j][i]) - (i==j);
+ // shear-stretch energy
+ Dune::FieldMatrix<field_type,dim-1,dim-1> sym2x2;
+ for (int i=0; i<dim-1; i++)
+ for (int j=0; j<dim-1; j++)
+ sym2x2[i][j] = 0.5 * (U.matrix()[i][j] + U.matrix()[j][i]) - (i==j);
- result += mu_ * sym2x2.frobenius_norm2();
+ result += mu_ * sym2x2.frobenius_norm2();
- // first order drill energy
- Dune::FieldMatrix<field_type,dim-1,dim-1> skew2x2;
- for (int i=0; i<dim-1; i++)
- for (int j=0; j<dim-1; j++)
- skew2x2[i][j] = 0.5 * (U.matrix()[i][j] - U.matrix()[j][i]);
+ // first order drill energy
+ Dune::FieldMatrix<field_type,dim-1,dim-1> skew2x2;
+ for (int i=0; i<dim-1; i++)
+ for (int j=0; j<dim-1; j++)
+ skew2x2[i][j] = 0.5 * (U.matrix()[i][j] - U.matrix()[j][i]);
- result += mu_c_ * skew2x2.frobenius_norm2();
+ result += mu_c_ * skew2x2.frobenius_norm2();
- // classical transverse shear energy
- result += kappa_ * (mu_ + mu_c_)/2 * (U.matrix()[2][0]*U.matrix()[2][0] + U.matrix()[2][1]*U.matrix()[2][1]);
+ // classical transverse shear energy
+ result += kappa_ * (mu_ + mu_c_)/2 * (U.matrix()[2][0]*U.matrix()[2][0] + U.matrix()[2][1]*U.matrix()[2][1]);
- // elongational stretch energy
- result += mu_*lambda_ / (2*mu_ + lambda_) * traceSquared(sym2x2);
+ // elongational stretch energy
+ result += mu_*lambda_ / (2*mu_ + lambda_) * traceSquared(sym2x2);
- return result;
- }
+ return result;
+ }
- /** \brief Energy for large-deformation problems (private communication by Patrizio Neff)
- */
- RT nonquadraticMembraneEnergy(const Dune::GFE::CosseratStrain<field_type,3,gridDim>& U) const
- {
- Dune::FieldMatrix<field_type,3,3> UMinus1 = U.matrix();
- for (int i=0; i<dim; i++)
- UMinus1[i][i] -= 1;
+ /** \brief Energy for large-deformation problems (private communication by Patrizio Neff)
+ */
+ RT nonquadraticMembraneEnergy(const Dune::GFE::CosseratStrain<field_type,3,gridDim>& U) const
+ {
+ Dune::FieldMatrix<field_type,3,3> UMinus1 = U.matrix();
+ for (int i=0; i<dim; i++)
+ UMinus1[i][i] -= 1;
- RT detU = U.determinant();
+ RT detU = U.determinant();
- return mu_ * Dune::GFE::sym(UMinus1).frobenius_norm2() + mu_c_ * Dune::GFE::skew(UMinus1).frobenius_norm2()
- + (mu_*lambda_)/(2*mu_ + lambda_) * 0.5 * ((detU-1)*(detU-1) + (1.0/detU -1)*(1.0/detU -1));
- }
+ return mu_ * Dune::GFE::sym(UMinus1).frobenius_norm2() + mu_c_ * Dune::GFE::skew(UMinus1).frobenius_norm2()
+ + (mu_*lambda_)/(2*mu_ + lambda_) * 0.5 * ((detU-1)*(detU-1) + (1.0/detU -1)*(1.0/detU -1));
+ }
- /** \brief The energy \f$ W_{mp}(\overline{U}) \f$, as written in
- * the second equation of (4.4) in Neff's paper
- */
- RT longNonquadraticMembraneEnergy(const Dune::GFE::CosseratStrain<field_type,3,gridDim>& U) const
- {
- RT result = 0;
+ /** \brief The energy \f$ W_{mp}(\overline{U}) \f$, as written in
+ * the second equation of (4.4) in Neff's paper
+ */
+ RT longNonquadraticMembraneEnergy(const Dune::GFE::CosseratStrain<field_type,3,gridDim>& U) const
+ {
+ RT result = 0;
- // shear-stretch energy
- Dune::FieldMatrix<field_type,dim-1,dim-1> sym2x2;
- for (int i=0; i<dim-1; i++)
- for (int j=0; j<dim-1; j++)
- sym2x2[i][j] = 0.5 * (U.matrix()[i][j] + U.matrix()[j][i]) - (i==j);
+ // shear-stretch energy
+ Dune::FieldMatrix<field_type,dim-1,dim-1> sym2x2;
+ for (int i=0; i<dim-1; i++)
+ for (int j=0; j<dim-1; j++)
+ sym2x2[i][j] = 0.5 * (U.matrix()[i][j] + U.matrix()[j][i]) - (i==j);
- result += mu_ * sym2x2.frobenius_norm2();
+ result += mu_ * sym2x2.frobenius_norm2();
- // first order drill energy
- Dune::FieldMatrix<field_type,dim-1,dim-1> skew2x2;
- for (int i=0; i<dim-1; i++)
- for (int j=0; j<dim-1; j++)
- skew2x2[i][j] = 0.5 * (U.matrix()[i][j] - U.matrix()[j][i]);
+ // first order drill energy
+ Dune::FieldMatrix<field_type,dim-1,dim-1> skew2x2;
+ for (int i=0; i<dim-1; i++)
+ for (int j=0; j<dim-1; j++)
+ skew2x2[i][j] = 0.5 * (U.matrix()[i][j] - U.matrix()[j][i]);
- result += mu_c_ * skew2x2.frobenius_norm2();
+ result += mu_c_ * skew2x2.frobenius_norm2();
- // classical transverse shear energy
- result += kappa_ * (mu_ + mu_c_)/2 * (U.matrix()[2][0]*U.matrix()[2][0] + U.matrix()[2][1]*U.matrix()[2][1]);
+ // classical transverse shear energy
+ result += kappa_ * (mu_ + mu_c_)/2 * (U.matrix()[2][0]*U.matrix()[2][0] + U.matrix()[2][1]*U.matrix()[2][1]);
- // elongational stretch energy
- RT detU = U.determinant();
- result += (mu_*lambda_)/(2*mu_ + lambda_) * 0.5 * ((detU-1)*(detU-1) + (1.0/detU -1)*(1.0/detU -1));
+ // elongational stretch energy
+ RT detU = U.determinant();
+ result += (mu_*lambda_)/(2*mu_ + lambda_) * 0.5 * ((detU-1)*(detU-1) + (1.0/detU -1)*(1.0/detU -1));
- return result;
- }
+ return result;
+ }
- RT curvatureEnergy(const Tensor3<field_type,3,3,gridDim>& DR) const
- {
- using std::pow;
+ RT curvatureEnergy(const Tensor3<field_type,3,3,gridDim>& DR) const
+ {
+ using std::pow;
#ifdef DONT_USE_CURL
- return mu_ * pow(L_c_ * L_c_ * DR.frobenius_norm2(),q_/2.0);
+ return mu_ * pow(L_c_ * L_c_ * DR.frobenius_norm2(),q_/2.0);
#else
- return mu_ * pow(L_c_ * L_c_ * curl(DR).frobenius_norm2(),q_/2.0);
+ return mu_ * pow(L_c_ * L_c_ * curl(DR).frobenius_norm2(),q_/2.0);
#endif
- }
+ }
- RT curvatureWithWryness(const Dune::FieldMatrix<field_type,dim,dim>& R, const Tensor3<field_type,3,3,gridDim>& DR) const
- {
- // construct Wryness tensor \Gamma as in "Refined dimensional reduction for isotropic elastic Cosserat shells with initial curvature"
- Dune::FieldMatrix<field_type,3,3> dRx1(0); //Derivative of R with respect to x1
- Dune::FieldMatrix<field_type,3,3> dRx2(0); //Derivative of R with respect to x2
- Dune::FieldMatrix<field_type,3,3> dRx3(0); //Derivative of R with respect to x3, this of course only exists if gridDim = 3 (then dim = 3 also, because dim >= gridDim, always)
- for (int i=0; i<3; i++)
- for (int j=0; j<3; j++) {
- dRx1[i][j] = DR[i][j][0];
- dRx2[i][j] = DR[i][j][1];
- dRx3[i][j] = gridDim == 3 ? DR[i][j][2] : 0;
- }
-
- Dune::FieldMatrix<field_type,3,3> wryness(0);
+ RT curvatureWithWryness(const Dune::FieldMatrix<field_type,dim,dim>& R, const Tensor3<field_type,3,3,gridDim>& DR) const
+ {
+ // construct Wryness tensor \Gamma as in "Refined dimensional reduction for isotropic elastic Cosserat shells with initial curvature"
+ Dune::FieldMatrix<field_type,3,3> dRx1(0); //Derivative of R with respect to x1
+ Dune::FieldMatrix<field_type,3,3> dRx2(0); //Derivative of R with respect to x2
+ Dune::FieldMatrix<field_type,3,3> dRx3(0); //Derivative of R with respect to x3, this of course only exists if gridDim = 3 (then dim = 3 also, because dim >= gridDim, always)
+ for (int i=0; i<3; i++)
+ for (int j=0; j<3; j++) {
+ dRx1[i][j] = DR[i][j][0];
+ dRx2[i][j] = DR[i][j][1];
+ dRx3[i][j] = gridDim == 3 ? DR[i][j][2] : 0;
+ }
+
+ Dune::FieldMatrix<field_type,3,3> wryness(0);
#if DUNE_VERSION_LT(DUNE_COMMON, 2, 9)
- Dune::FieldMatrix<field_type,dim,dim> transposeR;
- Dune::MatrixVector::transpose(R,transposeR);
- auto axialVectorx1 = SkewMatrix<field_type,3>(transposeR*dRx1).axial();
- auto axialVectorx2 = SkewMatrix<field_type,3>(transposeR*dRx2).axial();
- auto axialVectorx3 = SkewMatrix<field_type,3>(transposeR*dRx3).axial();
+ Dune::FieldMatrix<field_type,dim,dim> transposeR;
+ Dune::MatrixVector::transpose(R,transposeR);
+ auto axialVectorx1 = SkewMatrix<field_type,3>(transposeR*dRx1).axial();
+ auto axialVectorx2 = SkewMatrix<field_type,3>(transposeR*dRx2).axial();
+ auto axialVectorx3 = SkewMatrix<field_type,3>(transposeR*dRx3).axial();
#else
- auto axialVectorx1 = SkewMatrix<field_type,3>(transpose(R)*dRx1).axial();
- auto axialVectorx2 = SkewMatrix<field_type,3>(transpose(R)*dRx2).axial();
- auto axialVectorx3 = SkewMatrix<field_type,3>(transpose(R)*dRx3).axial();
+ auto axialVectorx1 = SkewMatrix<field_type,3>(transpose(R)*dRx1).axial();
+ auto axialVectorx2 = SkewMatrix<field_type,3>(transpose(R)*dRx2).axial();
+ auto axialVectorx3 = SkewMatrix<field_type,3>(transpose(R)*dRx3).axial();
#endif
- for (int i=0; i<3; i++) {
- wryness[i][0] = axialVectorx1[i];
- wryness[i][1] = axialVectorx2[i];
- wryness[i][2] = gridDim == 3 ? axialVectorx3[i] : 0;
- }
-
- // The choice for the Frobenius norm here is b1=b2=1 and b3 = 1/3
- return mu_ * L_c_ * L_c_ * (b1_ * Dune::GFE::dev(Dune::GFE::sym(wryness)).frobenius_norm2()
- + b2_ * Dune::GFE::skew(wryness).frobenius_norm2() + b3_ * Dune::GFE::traceSquared(wryness));
+ for (int i=0; i<3; i++) {
+ wryness[i][0] = axialVectorx1[i];
+ wryness[i][1] = axialVectorx2[i];
+ wryness[i][2] = gridDim == 3 ? axialVectorx3[i] : 0;
}
+ // The choice for the Frobenius norm here is b1=b2=1 and b3 = 1/3
+ return mu_ * L_c_ * L_c_ * (b1_ * Dune::GFE::dev(Dune::GFE::sym(wryness)).frobenius_norm2()
+ + b2_ * Dune::GFE::skew(wryness).frobenius_norm2() + b3_ * Dune::GFE::traceSquared(wryness));
+ }
- RT bendingEnergy(const Dune::FieldMatrix<field_type,dim,dim>& R, const Tensor3<field_type,3,3,gridDim>& DR) const
- {
- // left-multiply the derivative of the third director (in DR[][2][]) with R^T
- Dune::FieldMatrix<field_type,3,3> RT_DR3(0);
- for (int i=0; i<3; i++)
- for (int j=0; j<gridDim; j++)
- for (int k=0; k<3; k++)
- RT_DR3[i][j] += R[k][i] * DR[k][2][j];
- return mu_ * Dune::GFE::sym(RT_DR3).frobenius_norm2()
- + mu_c_ * Dune::GFE::skew(RT_DR3).frobenius_norm2()
- + mu_*lambda_/(2*mu_+lambda_) * Dune::GFE::traceSquared(RT_DR3);
- }
+ RT bendingEnergy(const Dune::FieldMatrix<field_type,dim,dim>& R, const Tensor3<field_type,3,3,gridDim>& DR) const
+ {
+ // left-multiply the derivative of the third director (in DR[][2][]) with R^T
+ Dune::FieldMatrix<field_type,3,3> RT_DR3(0);
+ for (int i=0; i<3; i++)
+ for (int j=0; j<gridDim; j++)
+ for (int k=0; k<3; k++)
+ RT_DR3[i][j] += R[k][i] * DR[k][2][j];
+
+ return mu_ * Dune::GFE::sym(RT_DR3).frobenius_norm2()
+ + mu_c_ * Dune::GFE::skew(RT_DR3).frobenius_norm2()
+ + mu_*lambda_/(2*mu_+lambda_) * Dune::GFE::traceSquared(RT_DR3);
+ }
- /** \brief The shell thickness */
- double thickness_;
+ /** \brief The shell thickness */
+ double thickness_;
- /** \brief Lame constants */
- double mu_, lambda_;
+ /** \brief Lame constants */
+ double mu_, lambda_;
- /** \brief Cosserat couple modulus, preferably 0 */
- double mu_c_;
+ /** \brief Cosserat couple modulus, preferably 0 */
+ double mu_c_;
- /** \brief Length scale parameter */
- double L_c_;
+ /** \brief Length scale parameter */
+ double L_c_;
- /** \brief Curvature exponent */
- double q_;
+ /** \brief Curvature exponent */
+ double q_;
- /** \brief Shear correction factor */
- double kappa_;
+ /** \brief Shear correction factor */
+ double kappa_;
- /** \brief Curvature parameters */
- double b1_, b2_, b3_;
+ /** \brief Curvature parameters */
+ double b1_, b2_, b3_;
- /** \brief The Neumann boundary */
- const BoundaryPatch<GridView>* neumannBoundary_;
+ /** \brief The Neumann boundary */
+ const BoundaryPatch<GridView>* neumannBoundary_;
- /** \brief The function implementing the Neumann data */
- const std::function<Dune::FieldVector<double,3>(Dune::FieldVector<double,dimworld>)> neumannFunction_;
+ /** \brief The function implementing the Neumann data */
+ const std::function<Dune::FieldVector<double,3>(Dune::FieldVector<double,dimworld>)> neumannFunction_;
- /** \brief The function implementing a volume load */
- const std::function<Dune::FieldVector<double,3>(Dune::FieldVector<double,dimworld>)> volumeLoad_;
+ /** \brief The function implementing a volume load */
+ const std::function<Dune::FieldVector<double,3>(Dune::FieldVector<double,dimworld>)> volumeLoad_;
};
template <class Basis, int dim, class field_type>
@@ -348,139 +348,139 @@ CosseratEnergyLocalStiffness<Basis,dim,field_type>::
energy(const typename Basis::LocalView& localView,
const std::vector<RigidBodyMotion<field_type,dim> >& localSolution) const
{
- RT energy = 0;
+ RT energy = 0;
- auto element = localView.element();
+ auto element = localView.element();
- using namespace Dune::TypeTree::Indices;
- const auto& localFiniteElement = LocalFiniteElementFactory<Basis,0>::get(localView,_0);
+ using namespace Dune::TypeTree::Indices;
+ const auto& localFiniteElement = LocalFiniteElementFactory<Basis,0>::get(localView,_0);
#ifdef PROJECTED_INTERPOLATION
- typedef Dune::GFE::LocalProjectedFEFunction<gridDim, DT, decltype(localFiniteElement), TargetSpace> LocalGFEFunctionType;
+ typedef Dune::GFE::LocalProjectedFEFunction<gridDim, DT, decltype(localFiniteElement), TargetSpace> LocalGFEFunctionType;
#else
- typedef LocalGeodesicFEFunction<gridDim, DT, decltype(localFiniteElement), TargetSpace> LocalGFEFunctionType;
+ typedef LocalGeodesicFEFunction<gridDim, DT, decltype(localFiniteElement), TargetSpace> LocalGFEFunctionType;
#endif
- LocalGFEFunctionType localGeodesicFEFunction(localFiniteElement,localSolution);
+ LocalGFEFunctionType localGeodesicFEFunction(localFiniteElement,localSolution);
- int quadOrder = (element.type().isSimplex()) ? localFiniteElement.localBasis().order()
+ int quadOrder = (element.type().isSimplex()) ? localFiniteElement.localBasis().order()
: localFiniteElement.localBasis().order() * gridDim;
- const auto& quad = Dune::QuadratureRules<DT, gridDim>::rule(element.type(), quadOrder);
+ const auto& quad = Dune::QuadratureRules<DT, gridDim>::rule(element.type(), quadOrder);
- for (size_t pt=0; pt<quad.size(); pt++) {
+ for (size_t pt=0; pt<quad.size(); pt++) {
- // Local position of the quadrature point
- const Dune::FieldVector<DT,gridDim>& quadPos = quad[pt].position();
+ // Local position of the quadrature point
+ const Dune::FieldVector<DT,gridDim>& quadPos = quad[pt].position();
- const DT integrationElement = element.geometry().integrationElement(quadPos);
+ const DT integrationElement = element.geometry().integrationElement(quadPos);
- const auto jacobianInverseTransposed = element.geometry().jacobianInverseTransposed(quadPos);
+ const auto jacobianInverseTransposed = element.geometry().jacobianInverseTransposed(quadPos);
- DT weight = quad[pt].weight() * integrationElement;
+ DT weight = quad[pt].weight() * integrationElement;
- // The value of the local function
- RigidBodyMotion<field_type,dim> value = localGeodesicFEFunction.evaluate(quadPos);
+ // The value of the local function
+ RigidBodyMotion<field_type,dim> value = localGeodesicFEFunction.evaluate(quadPos);
- // The derivative of the local function defined on the reference element
- typename LocalGFEFunctionType::DerivativeType referenceDerivative = localGeodesicFEFunction.evaluateDerivative(quadPos,value);
+ // The derivative of the local function defined on the reference element
+ typename LocalGFEFunctionType::DerivativeType referenceDerivative = localGeodesicFEFunction.evaluateDerivative(quadPos,value);
- // The derivative of the function defined on the actual element
- typename LocalGFEFunctionType::DerivativeType derivative(0);
+ // The derivative of the function defined on the actual element
+ typename LocalGFEFunctionType::DerivativeType derivative(0);
- for (size_t comp=0; comp<referenceDerivative.N(); comp++)
- jacobianInverseTransposed.umv(referenceDerivative[comp], derivative[comp]);
+ for (size_t comp=0; comp<referenceDerivative.N(); comp++)
+ jacobianInverseTransposed.umv(referenceDerivative[comp], derivative[comp]);
- /////////////////////////////////////////////////////////
- // compute U, the Cosserat strain
- /////////////////////////////////////////////////////////
- static_assert(dim>=gridDim, "Codim of the grid must be nonnegative");
+ /////////////////////////////////////////////////////////
+ // compute U, the Cosserat strain
+ /////////////////////////////////////////////////////////
+ static_assert(dim>=gridDim, "Codim of the grid must be nonnegative");
- //
- Dune::FieldMatrix<field_type,dim,dim> R;
- value.q.matrix(R);
+ //
+ Dune::FieldMatrix<field_type,dim,dim> R;
+ value.q.matrix(R);
- Dune::GFE::CosseratStrain<field_type,dim,gridDim> U(derivative,R);
+ Dune::GFE::CosseratStrain<field_type,dim,gridDim> U(derivative,R);
- //////////////////////////////////////////////////////////
- // Compute the derivative of the rotation
- // Note: we need it in matrix coordinates
- //////////////////////////////////////////////////////////
+ //////////////////////////////////////////////////////////
+ // Compute the derivative of the rotation
+ // Note: we need it in matrix coordinates
+ //////////////////////////////////////////////////////////
- Tensor3<field_type,3,3,gridDim> DR = value.quaternionTangentToMatrixTangent(derivative);
+ Tensor3<field_type,3,3,gridDim> DR = value.quaternionTangentToMatrixTangent(derivative);
- // Add the local energy density
- if (gridDim==2) {
+ // Add the local energy density
+ if (gridDim==2) {
#ifdef QUADRATIC_MEMBRANE_ENERGY
- //energy += weight * thickness_ * quadraticMembraneEnergy(U.matrix());
- energy += weight * thickness_ * longQuadraticMembraneEnergy(U);
+ //energy += weight * thickness_ * quadraticMembraneEnergy(U.matrix());
+ energy += weight * thickness_ * longQuadraticMembraneEnergy(U);
#else
- //energy += weight * thickness_ * nonquadraticMembraneEnergy(U);
- energy += weight * thickness_ * longNonquadraticMembraneEnergy(U);
+ //energy += weight * thickness_ * nonquadraticMembraneEnergy(U);
+ energy += weight * thickness_ * longNonquadraticMembraneEnergy(U);
#endif
- energy += weight * thickness_ * curvatureEnergy(DR);
- energy += weight * std::pow(thickness_,3) / 12.0 * bendingEnergy(R,DR);
- } else if (gridDim==3) {
- energy += weight * quadraticMembraneEnergy(U);
+ energy += weight * thickness_ * curvatureEnergy(DR);
+ energy += weight * std::pow(thickness_,3) / 12.0 * bendingEnergy(R,DR);
+ } else if (gridDim==3) {
+ energy += weight * quadraticMembraneEnergy(U);
#ifdef CURVATURE_WITH_WRYNESS
- energy += weight * curvatureWithWryness(R,DR);
+ energy += weight * curvatureWithWryness(R,DR);
#else
- energy += weight * curvatureEnergy(DR);
+ energy += weight * curvatureEnergy(DR);
#endif
- } else
- DUNE_THROW(Dune::NotImplemented, "CosseratEnergyStiffness for 1d grids");
-
- ///////////////////////////////////////////////////////////
- // Volume load contribution
- ///////////////////////////////////////////////////////////
+ } else
+ DUNE_THROW(Dune::NotImplemented, "CosseratEnergyStiffness for 1d grids");
- if (not volumeLoad_)
- continue;
+ ///////////////////////////////////////////////////////////
+ // Volume load contribution
+ ///////////////////////////////////////////////////////////
- // Value of the volume load density at the current position
- auto volumeLoadDensity = volumeLoad_(element.geometry().global(quad[pt].position()));
+ if (not volumeLoad_)
+ continue;
- // Only translational dofs are affected by the volume load
- for (size_t i=0; i<volumeLoadDensity.size(); i++)
- energy += (volumeLoadDensity[i] * value.r[i]) * quad[pt].weight() * integrationElement;
- }
+ // Value of the volume load density at the current position
+ auto volumeLoadDensity = volumeLoad_(element.geometry().global(quad[pt].position()));
+ // Only translational dofs are affected by the volume load
+ for (size_t i=0; i<volumeLoadDensity.size(); i++)
+ energy += (volumeLoadDensity[i] * value.r[i]) * quad[pt].weight() * integrationElement;
+ }
- //////////////////////////////////////////////////////////////////////////////
- // Assemble boundary contributions
- //////////////////////////////////////////////////////////////////////////////
- if (not neumannFunction_)
- return energy;
+ //////////////////////////////////////////////////////////////////////////////
+ // Assemble boundary contributions
+ //////////////////////////////////////////////////////////////////////////////
- for (auto&& it : intersections(neumannBoundary_->gridView(),element) )
- {
- if (not neumannBoundary_ or not neumannBoundary_->contains(it))
- continue;
+ if (not neumannFunction_)
+ return energy;
- const Dune::QuadratureRule<DT, gridDim-1>& quad
- = Dune::QuadratureRules<DT, gridDim-1>::rule(it.type(), quadOrder);
+ for (auto&& it : intersections(neumannBoundary_->gridView(),element) )
+ {
+ if (not neumannBoundary_ or not neumannBoundary_->contains(it))
+ continue;
- for (size_t pt=0; pt<quad.size(); pt++) {
+ const Dune::QuadratureRule<DT, gridDim-1>& quad
+ = Dune::QuadratureRules<DT, gridDim-1>::rule(it.type(), quadOrder);
- // Local position of the quadrature point
- const Dune::FieldVector<DT,gridDim>& quadPos = it.geometryInInside().global(quad[pt].position());
+ for (size_t pt=0; pt<quad.size(); pt++) {
- const DT integrationElement = it.geometry().integrationElement(quad[pt].position());
+ // Local position of the quadrature point
+ const Dune::FieldVector<DT,gridDim>& quadPos = it.geometryInInside().global(quad[pt].position());
- // The value of the local function
- RigidBodyMotion<field_type,dim> value = localGeodesicFEFunction.evaluate(quadPos);
+ const DT integrationElement = it.geometry().integrationElement(quad[pt].position());
- // Value of the Neumann data at the current position
- auto neumannValue = neumannFunction_(it.geometry().global(quad[pt].position()));
+ // The value of the local function
+ RigidBodyMotion<field_type,dim> value = localGeodesicFEFunction.evaluate(quadPos);
- // Only translational dofs are affected by the Neumann force
- for (size_t i=0; i<neumannValue.size(); i++)
- energy += (neumannValue[i] * value.r[i]) * quad[pt].weight() * integrationElement;
+ // Value of the Neumann data at the current position
+ auto neumannValue = neumannFunction_(it.geometry().global(quad[pt].position()));
- }
+ // Only translational dofs are affected by the Neumann force
+ for (size_t i=0; i<neumannValue.size(); i++)
+ energy += (neumannValue[i] * value.r[i]) * quad[pt].weight() * integrationElement;
}
- return energy;
+ }
+
+ return energy;
}
template <class Basis, int dim, class field_type>
@@ -490,155 +490,154 @@ energy(const typename Basis::LocalView& localView,
const std::vector<RealTuple<field_type,dim> >& localDeformationConfiguration,
const std::vector<Rotation<field_type,dim> >& localOrientationConfiguration) const
{
- auto element = localView.element();
+ auto element = localView.element();
- RT energy = 0;
+ RT energy = 0;
- using namespace Dune::TypeTree::Indices;
- const auto& deformationLocalFiniteElement = LocalFiniteElementFactory<Basis,0>::get(localView,_0);
- const auto& orientationLocalFiniteElement = LocalFiniteElementFactory<Basis,1>::get(localView,_1);
+ using namespace Dune::TypeTree::Indices;
+ const auto& deformationLocalFiniteElement = LocalFiniteElementFactory<Basis,0>::get(localView,_0);
+ const auto& orientationLocalFiniteElement = LocalFiniteElementFactory<Basis,1>::get(localView,_1);
#ifdef PROJECTED_INTERPOLATION
- typedef Dune::GFE::LocalProjectedFEFunction<gridDim, DT, decltype(deformationLocalFiniteElement), RealTuple<field_type,dim> >
+ typedef Dune::GFE::LocalProjectedFEFunction<gridDim, DT, decltype(deformationLocalFiniteElement), RealTuple<field_type,dim> >
LocalDeformationGFEFunctionType;
#else
- typedef LocalGeodesicFEFunction<gridDim, DT, decltype(deformationLocalFiniteElement), RealTuple<field_type,dim> >
+ typedef LocalGeodesicFEFunction<gridDim, DT, decltype(deformationLocalFiniteElement), RealTuple<field_type,dim> >
LocalDeformationGFEFunctionType;
#endif
- LocalDeformationGFEFunctionType localDeformationGFEFunction(deformationLocalFiniteElement,localDeformationConfiguration);
+ LocalDeformationGFEFunctionType localDeformationGFEFunction(deformationLocalFiniteElement,localDeformationConfiguration);
#ifdef PROJECTED_INTERPOLATION
- typedef Dune::GFE::LocalProjectedFEFunction<gridDim, DT, decltype(orientationLocalFiniteElement), Rotation<field_type,dim> > LocalOrientationGFEFunctionType;
+ typedef Dune::GFE::LocalProjectedFEFunction<gridDim, DT, decltype(orientationLocalFiniteElement), Rotation<field_type,dim> > LocalOrientationGFEFunctionType;
#else
- typedef LocalGeodesicFEFunction<gridDim, DT, decltype(orientationLocalFiniteElement), Rotation<field_type,dim> > LocalOrientationGFEFunctionType;
+ typedef LocalGeodesicFEFunction<gridDim, DT, decltype(orientationLocalFiniteElement), Rotation<field_type,dim> > LocalOrientationGFEFunctionType;
#endif
- LocalOrientationGFEFunctionType localOrientationGFEFunction(orientationLocalFiniteElement,localOrientationConfiguration);
+ LocalOrientationGFEFunctionType localOrientationGFEFunction(orientationLocalFiniteElement,localOrientationConfiguration);
- // \todo Implement smarter quadrature rule selection for more efficiency, i.e., less evaluations of the Rotation GFE function
- int quadOrder = deformationLocalFiniteElement.localBasis().order() * ((element.type().isSimplex()) ? 1 : gridDim);
+ // \todo Implement smarter quadrature rule selection for more efficiency, i.e., less evaluations of the Rotation GFE function
+ int quadOrder = deformationLocalFiniteElement.localBasis().order() * ((element.type().isSimplex()) ? 1 : gridDim);
- const auto& quad = Dune::QuadratureRules<DT, gridDim>::rule(element.type(), quadOrder);
+ const auto& quad = Dune::QuadratureRules<DT, gridDim>::rule(element.type(), quadOrder);
- for (size_t pt=0; pt<quad.size(); pt++)
- {
- // Local position of the quadrature point
- const Dune::FieldVector<DT,gridDim>& quadPos = quad[pt].position();
+ for (size_t pt=0; pt<quad.size(); pt++)
+ {
+ // Local position of the quadrature point
+ const Dune::FieldVector<DT,gridDim>& quadPos = quad[pt].position();
- const DT integrationElement = element.geometry().integrationElement(quadPos);
+ const DT integrationElement = element.geometry().integrationElement(quadPos);
- const auto jacobianInverseTransposed = element.geometry().jacobianInverseTransposed(quadPos);
+ const auto jacobianInverseTransposed = element.geometry().jacobianInverseTransposed(quadPos);
- DT weight = quad[pt].weight() * integrationElement;
+ DT weight = quad[pt].weight() * integrationElement;
- // The value of the local deformation
- RealTuple<field_type,dim> deformationValue = localDeformationGFEFunction.evaluate(quadPos);
- Rotation<field_type,dim> orientationValue = localOrientationGFEFunction.evaluate(quadPos);
+ // The value of the local deformation
+ RealTuple<field_type,dim> deformationValue = localDeformationGFEFunction.evaluate(quadPos);
+ Rotation<field_type,dim> orientationValue = localOrientationGFEFunction.evaluate(quadPos);
- // The derivative of the local function defined on the reference element
- typename LocalDeformationGFEFunctionType::DerivativeType deformationReferenceDerivative = localDeformationGFEFunction.evaluateDerivative(quadPos,deformationValue);
- typename LocalOrientationGFEFunctionType::DerivativeType orientationReferenceDerivative = localOrientationGFEFunction.evaluateDerivative(quadPos,orientationValue);
+ // The derivative of the local function defined on the reference element
+ typename LocalDeformationGFEFunctionType::DerivativeType deformationReferenceDerivative = localDeformationGFEFunction.evaluateDerivative(quadPos,deformationValue);
+ typename LocalOrientationGFEFunctionType::DerivativeType orientationReferenceDerivative = localOrientationGFEFunction.evaluateDerivative(quadPos,orientationValue);
- // The derivative of the function defined on the actual element
- typename LocalDeformationGFEFunctionType::DerivativeType deformationDerivative;
- typename LocalOrientationGFEFunctionType::DerivativeType orientationDerivative;
+ // The derivative of the function defined on the actual element
+ typename LocalDeformationGFEFunctionType::DerivativeType deformationDerivative;
+ typename LocalOrientationGFEFunctionType::DerivativeType orientationDerivative;
- for (size_t comp=0; comp<deformationReferenceDerivative.N(); comp++)
- jacobianInverseTransposed.mv(deformationReferenceDerivative[comp], deformationDerivative[comp]);
+ for (size_t comp=0; comp<deformationReferenceDerivative.N(); comp++)
+ jacobianInverseTransposed.mv(deformationReferenceDerivative[comp], deformationDerivative[comp]);
- for (size_t comp=0; comp<orientationReferenceDerivative.N(); comp++)
- jacobianInverseTransposed.mv(orientationReferenceDerivative[comp], orientationDerivative[comp]);
+ for (size_t comp=0; comp<orientationReferenceDerivative.N(); comp++)
+ jacobianInverseTransposed.mv(orientationReferenceDerivative[comp], orientationDerivative[comp]);
- /////////////////////////////////////////////////////////
- // compute U, the Cosserat strain
- /////////////////////////////////////////////////////////
- static_assert(dim>=gridDim, "Codim of the grid must be nonnegative");
+ /////////////////////////////////////////////////////////
+ // compute U, the Cosserat strain
+ /////////////////////////////////////////////////////////
+ static_assert(dim>=gridDim, "Codim of the grid must be nonnegative");
- //
- Dune::FieldMatrix<field_type,dim,dim> R;
- orientationValue.matrix(R);
+ //
+ Dune::FieldMatrix<field_type,dim,dim> R;
+ orientationValue.matrix(R);
- Dune::GFE::CosseratStrain<field_type,dim,gridDim> U(deformationDerivative,R);
+ Dune::GFE::CosseratStrain<field_type,dim,gridDim> U(deformationDerivative,R);
- //////////////////////////////////////////////////////////
- // Compute the derivative of the rotation
- // Note: we need it in matrix coordinates
- //////////////////////////////////////////////////////////
+ //////////////////////////////////////////////////////////
+ // Compute the derivative of the rotation
+ // Note: we need it in matrix coordinates
+ //////////////////////////////////////////////////////////
- Tensor3<field_type,3,3,gridDim> DR = orientationValue.quaternionTangentToMatrixTangent(orientationDerivative);
+ Tensor3<field_type,3,3,gridDim> DR = orientationValue.quaternionTangentToMatrixTangent(orientationDerivative);
- // Add the local energy density
- if (gridDim==2) {
+ // Add the local energy density
+ if (gridDim==2) {
#ifdef QUADRATIC_MEMBRANE_ENERGY
- //energy += weight * thickness_ * quadraticMembraneEnergy(U.matrix());
- energy += weight * thickness_ * longQuadraticMembraneEnergy(U);
+ //energy += weight * thickness_ * quadraticMembraneEnergy(U.matrix());
+ energy += weight * thickness_ * longQuadraticMembraneEnergy(U);
#else
- energy += weight * thickness_ * nonquadraticMembraneEnergy(U);
+ energy += weight * thickness_ * nonquadraticMembraneEnergy(U);
#endif
- energy += weight * thickness_ * curvatureEnergy(DR);
- energy += weight * std::pow(thickness_,3) / 12.0 * bendingEnergy(R,DR);
- } else if (gridDim==3) {
- energy += weight * quadraticMembraneEnergy(U);
+ energy += weight * thickness_ * curvatureEnergy(DR);
+ energy += weight * std::pow(thickness_,3) / 12.0 * bendingEnergy(R,DR);
+ } else if (gridDim==3) {
+ energy += weight * quadraticMembraneEnergy(U);
#ifdef CURVATURE_WITH_WRYNESS
- energy += weight * curvatureWithWryness(R,DR);
+ energy += weight * curvatureWithWryness(R,DR);
#else
- energy += weight * curvatureEnergy(DR);
+ energy += weight * curvatureEnergy(DR);
#endif
- } else
- DUNE_THROW(Dune::NotImplemented, "CosseratEnergyStiffness for 1d grids");
-
- ///////////////////////////////////////////////////////////
- // Volume load contribution
- ///////////////////////////////////////////////////////////
- if (not volumeLoad_)
- continue;
+ } else
+ DUNE_THROW(Dune::NotImplemented, "CosseratEnergyStiffness for 1d grids");
- // Value of the volume load density at the current position
- auto volumeLoadDensity = volumeLoad_(element.geometry().global(quad[pt].position()));
+ ///////////////////////////////////////////////////////////
+ // Volume load contribution
+ ///////////////////////////////////////////////////////////
+ if (not volumeLoad_)
+ continue;
+ // Value of the volume load density at the current position
+ auto volumeLoadDensity = volumeLoad_(element.geometry().global(quad[pt].position()));
- // Only translational dofs are affected by the volume load
- for (size_t i=0; i<volumeLoadDensity.size(); i++)
- energy += (volumeLoadDensity[i] * deformationValue[i]) * quad[pt].weight() * integrationElement;
- }
+ // Only translational dofs are affected by the volume load
+ for (size_t i=0; i<volumeLoadDensity.size(); i++)
+ energy += (volumeLoadDensity[i] * deformationValue[i]) * quad[pt].weight() * integrationElement;
- //////////////////////////////////////////////////////////////////////////////
- // Assemble boundary contributions
- //////////////////////////////////////////////////////////////////////////////
+ }
- if (not neumannFunction_)
- return energy;
+ //////////////////////////////////////////////////////////////////////////////
+ // Assemble boundary contributions
+ //////////////////////////////////////////////////////////////////////////////
- for (auto&& it : intersections(neumannBoundary_->gridView(),element) )
- {
- if (not neumannBoundary_ or not neumannBoundary_->contains(it))
- continue;
+ if (not neumannFunction_)
+ return energy;
- const auto& quad = Dune::QuadratureRules<DT, gridDim-1>::rule(it.type(), quadOrder);
+ for (auto&& it : intersections(neumannBoundary_->gridView(),element) )
+ {
+ if (not neumannBoundary_ or not neumannBoundary_->contains(it))
+ continue;
- for (size_t pt=0; pt<quad.size(); pt++) {
+ const auto& quad = Dune::QuadratureRules<DT, gridDim-1>::rule(it.type(), quadOrder);
- // Local position of the quadrature point
- const Dune::FieldVector<DT,gridDim>& quadPos = it.geometryInInside().global(quad[pt].position());
+ for (size_t pt=0; pt<quad.size(); pt++) {
- const DT integrationElement = it.geometry().integrationElement(quad[pt].position());
+ // Local position of the quadrature point
+ const Dune::FieldVector<DT,gridDim>& quadPos = it.geometryInInside().global(quad[pt].position());
- // The value of the local function
- RealTuple<field_type,dim> deformationValue = localDeformationGFEFunction.evaluate(quadPos);
+ const DT integrationElement = it.geometry().integrationElement(quad[pt].position());
- // Value of the Neumann data at the current position
- auto neumannValue = neumannFunction_(it.geometry().global(quad[pt].position()));
+ // The value of the local function
+ RealTuple<field_type,dim> deformationValue = localDeformationGFEFunction.evaluate(quadPos);
- // Only translational dofs are affected by the Neumann force
- for (size_t i=0; i<neumannValue.size(); i++)
- energy += (neumannValue[i] * deformationValue.globalCoordinates()[i]) * quad[pt].weight() * integrationElement;
+ // Value of the Neumann data at the current position
+ auto neumannValue = neumannFunction_(it.geometry().global(quad[pt].position()));
- }
+ // Only translational dofs are affected by the Neumann force
+ for (size_t i=0; i<neumannValue.size(); i++)
+ energy += (neumannValue[i] * deformationValue.globalCoordinates()[i]) * quad[pt].weight() * integrationElement;
}
- return energy;
+ }
+
+ return energy;
}
#endif //#ifndef COSSERAT_ENERGY_LOCAL_STIFFNESS_HH
-
diff --git a/dune/gfe/assemblers/cosseratrodenergy.hh b/dune/gfe/assemblers/cosseratrodenergy.hh
index 11707523..b2c6dced 100644
--- a/dune/gfe/assemblers/cosseratrodenergy.hh
+++ b/dune/gfe/assemblers/cosseratrodenergy.hh
@@ -21,10 +21,10 @@
namespace Dune::GFE {
-template<class Basis, class LocalInterpolationRule, class RT>
-class CosseratRodEnergy
-: public LocalEnergy<Basis, RigidBodyMotion<RT,3> >
-{
+ template<class Basis, class LocalInterpolationRule, class RT>
+ class CosseratRodEnergy
+ : public LocalEnergy<Basis, RigidBodyMotion<RT,3> >
+ {
typedef RigidBodyMotion<RT,3> TargetSpace;
// grid types
@@ -41,18 +41,18 @@ class CosseratRodEnergy
// Quadrature order used for the bending and torsion energy
constexpr static int bendingQuadOrder = 2;
-public:
+ public:
/** \brief The stress-free configuration
- The number type cannot be RT, because RT become `adouble` when
- using RodLocalStiffness together with an AD system.
- The referenceConfiguration is not a variable, and we don't
- want to use `adouble` for it.
+ The number type cannot be RT, because RT become `adouble` when
+ using RodLocalStiffness together with an AD system.
+ The referenceConfiguration is not a variable, and we don't
+ want to use `adouble` for it.
*/
std::vector<RigidBodyMotion<double,3> > referenceConfiguration_;
-public:
+ public:
//! Each block is x, y, theta in 2d, T (R^3 \times SO(3)) in 3d
static constexpr auto blocksize = TargetSpace::EmbeddedTangentVector::dimension;
@@ -70,9 +70,9 @@ public:
//! Constructor
CosseratRodEnergy(const GridView& gridView,
const std::array<double,3>& K, const std::array<double,3>& A)
- : K_(K),
- A_(A),
- gridView_(gridView)
+ : K_(K),
+ A_(A),
+ gridView_(gridView)
{}
/** \brief Constructor setting shape constants and material parameters
@@ -80,27 +80,27 @@ public:
\param J1, J2 The geometric moments (Flächenträgheitsmomente)
\param E Young's modulus
\param nu Poisson number
- */
+ */
CosseratRodEnergy(const GridView& gridView,
double A, double J1, double J2, double E, double nu)
- : gridView_(gridView)
+ : gridView_(gridView)
{
- // shear modulus
- double G = E/(2+2*nu);
+ // shear modulus
+ double G = E/(2+2*nu);
- K_[0] = E * J1;
- K_[1] = E * J2;
- K_[2] = G * (J1 + J2);
+ K_[0] = E * J1;
+ K_[1] = E * J2;
+ K_[2] = G * (J1 + J2);
- A_[0] = G * A;
- A_[1] = G * A;
- A_[2] = E * A;
+ A_[0] = G * A;
+ A_[1] = G * A;
+ A_[2] = E * A;
}
/** \brief Set the stress-free configuration
*/
void setReferenceConfiguration(const std::vector<RigidBodyMotion<double,3> >& referenceConfiguration) {
- referenceConfiguration_ = referenceConfiguration;
+ referenceConfiguration_ = referenceConfiguration;
}
/** \brief Compute local element energy */
@@ -113,8 +113,8 @@ public:
*/
template<class ReboundLocalInterpolationRule>
auto getStrain(const ReboundLocalInterpolationRule& localSolution,
- const Entity& element,
- const FieldVector<double,1>& pos) const;
+ const Entity& element,
+ const FieldVector<double,1>& pos) const;
/** \brief Get the rod stress at one point in the rod
*
@@ -122,8 +122,8 @@ public:
*/
template<class Number>
auto getStress(const std::vector<RigidBodyMotion<Number,3> >& localSolution,
- const Entity& element,
- const FieldVector<double,1>& pos) const;
+ const Entity& element,
+ const FieldVector<double,1>& pos) const;
/** \brief Get average strain for each element */
void getStrain(const std::vector<RigidBodyMotion<double,3> >& sol,
@@ -135,43 +135,43 @@ public:
/** \brief Return resultant force across boundary in canonical coordinates
- \note Linear run-time in the size of the grid */
+ \note Linear run-time in the size of the grid */
template <class PatchGridView>
auto getResultantForce(const BoundaryPatch<PatchGridView>& boundary,
- const std::vector<RigidBodyMotion<double,3> >& sol) const;
+ const std::vector<RigidBodyMotion<double,3> >& sol) const;
-protected:
+ protected:
std::vector<RigidBodyMotion<double,3> > getLocalReferenceConfiguration(const typename Basis::LocalView& localView) const
{
- unsigned int numOfBaseFct = localView.size();
- std::vector<RigidBodyMotion<double,3> > localReferenceConfiguration(numOfBaseFct);
+ unsigned int numOfBaseFct = localView.size();
+ std::vector<RigidBodyMotion<double,3> > localReferenceConfiguration(numOfBaseFct);
- for (size_t i=0; i<numOfBaseFct; i++)
- localReferenceConfiguration[i] = referenceConfiguration_[localView.index(i)];
+ for (size_t i=0; i<numOfBaseFct; i++)
+ localReferenceConfiguration[i] = referenceConfiguration_[localView.index(i)];
- return localReferenceConfiguration;
+ return localReferenceConfiguration;
}
- template <class T>
+ template <class T>
static FieldVector<T,3> darboux(const Rotation<T,3>& q, const FieldVector<T,4>& q_s)
{
- FieldVector<T,3> u; // The Darboux vector
+ FieldVector<T,3> u; // The Darboux vector
- u[0] = 2 * (q.B(0) * q_s);
- u[1] = 2 * (q.B(1) * q_s);
- u[2] = 2 * (q.B(2) * q_s);
+ u[0] = 2 * (q.B(0) * q_s);
+ u[1] = 2 * (q.B(1) * q_s);
+ u[2] = 2 * (q.B(2) * q_s);
- return u;
+ return u;
}
-};
+ };
-template<class Basis, class LocalInterpolationRule, class RT>
-RT CosseratRodEnergy<Basis, LocalInterpolationRule, RT>::
-energy(const typename Basis::LocalView& localView,
- const std::vector<RigidBodyMotion<RT,3> >& localCoefficients) const
-{
+ template<class Basis, class LocalInterpolationRule, class RT>
+ RT CosseratRodEnergy<Basis, LocalInterpolationRule, RT>::
+ energy(const typename Basis::LocalView& localView,
+ const std::vector<RigidBodyMotion<RT,3> >& localCoefficients) const
+ {
const auto& localFiniteElement = localView.tree().finiteElement();
LocalInterpolationRule localConfiguration(localFiniteElement, localCoefficients);
@@ -193,20 +193,20 @@ energy(const typename Basis::LocalView& localView,
for (size_t pt=0; pt<shearingQuad.size(); pt++) {
- // Local position of the quadrature point
- const auto quadPos = shearingQuad[pt].position();
+ // Local position of the quadrature point
+ const auto quadPos = shearingQuad[pt].position();
- const double integrationElement = element.geometry().integrationElement(quadPos);
+ const double integrationElement = element.geometry().integrationElement(quadPos);
- double weight = shearingQuad[pt].weight() * integrationElement;
+ double weight = shearingQuad[pt].weight() * integrationElement;
- auto strain = getStrain(localConfiguration, element, quadPos);
+ auto strain = getStrain(localConfiguration, element, quadPos);
- // The reference strain
- auto referenceStrain = getStrain(localReferenceConfiguration, element, quadPos);
+ // The reference strain
+ auto referenceStrain = getStrain(localReferenceConfiguration, element, quadPos);
- for (int i=0; i<3; i++)
- energy += weight * 0.5 * A_[i] * (strain[i] - referenceStrain[i]) * (strain[i] - referenceStrain[i]);
+ for (int i=0; i<3; i++)
+ energy += weight * 0.5 * A_[i] * (strain[i] - referenceStrain[i]) * (strain[i] - referenceStrain[i]);
}
@@ -215,33 +215,33 @@ energy(const typename Basis::LocalView& localView,
for (size_t pt=0; pt<bendingQuad.size(); pt++) {
- // Local position of the quadrature point
- const FieldVector<double,1>& quadPos = bendingQuad[pt].position();
+ // Local position of the quadrature point
+ const FieldVector<double,1>& quadPos = bendingQuad[pt].position();
- double weight = bendingQuad[pt].weight() * element.geometry().integrationElement(quadPos);
+ double weight = bendingQuad[pt].weight() * element.geometry().integrationElement(quadPos);
- auto strain = getStrain(localConfiguration, element, quadPos);
+ auto strain = getStrain(localConfiguration, element, quadPos);
- // The reference strain
- auto referenceStrain = getStrain(localReferenceConfiguration, element, quadPos);
+ // The reference strain
+ auto referenceStrain = getStrain(localReferenceConfiguration, element, quadPos);
- // Part II: the bending and twisting energy
- for (int i=0; i<3; i++)
- energy += weight * 0.5 * K_[i] * (strain[i+3] - referenceStrain[i+3]) * (strain[i+3] - referenceStrain[i+3]);
+ // Part II: the bending and twisting energy
+ for (int i=0; i<3; i++)
+ energy += weight * 0.5 * K_[i] * (strain[i+3] - referenceStrain[i+3]) * (strain[i+3] - referenceStrain[i+3]);
}
return energy;
-}
+ }
-template<class Basis, class LocalInterpolationRule, class RT>
-template <class ReboundLocalInterpolationRule>
-auto CosseratRodEnergy<Basis, LocalInterpolationRule, RT>::
-getStrain(const ReboundLocalInterpolationRule& localInterpolation,
- const Entity& element,
- const FieldVector<double,1>& pos) const
-{
+ template<class Basis, class LocalInterpolationRule, class RT>
+ template <class ReboundLocalInterpolationRule>
+ auto CosseratRodEnergy<Basis, LocalInterpolationRule, RT>::
+ getStrain(const ReboundLocalInterpolationRule& localInterpolation,
+ const Entity& element,
+ const FieldVector<double,1>& pos) const
+ {
const auto jit = element.geometry().jacobianInverseTransposed(pos);
auto value = localInterpolation.evaluate(pos);
@@ -282,15 +282,15 @@ getStrain(const ReboundLocalInterpolationRule& localInterpolation,
strain[5] = u[2];
return strain;
-}
-
-template<class Basis, class LocalInterpolationRule, class RT>
-template <class Number>
-auto CosseratRodEnergy<Basis, LocalInterpolationRule, RT>::
-getStress(const std::vector<RigidBodyMotion<Number,3> >& localSolution,
- const Entity& element,
- const FieldVector<double, 1>& pos) const
-{
+ }
+
+ template<class Basis, class LocalInterpolationRule, class RT>
+ template <class Number>
+ auto CosseratRodEnergy<Basis, LocalInterpolationRule, RT>::
+ getStress(const std::vector<RigidBodyMotion<Number,3> >& localSolution,
+ const Entity& element,
+ const FieldVector<double, 1>& pos) const
+ {
const auto& indexSet = gridView_.indexSet();
std::vector<TargetSpace> localRefConf = {referenceConfiguration_[indexSet.subIndex(element, 0, 1)],
referenceConfiguration_[indexSet.subIndex(element, 1, 1)]};
@@ -300,22 +300,22 @@ getStress(const std::vector<RigidBodyMotion<Number,3> >& localSolution,
FieldVector<RT, 6> stress;
for (int i=0; i < dim; i++)
- stress[i] = (strain[i] - referenceStrain[i]) * A_[i];
+ stress[i] = (strain[i] - referenceStrain[i]) * A_[i];
for (int i=0; i < dim; i++)
- stress[i+3] = (strain[i+3] - referenceStrain[i+3]) * K_[i];
+ stress[i+3] = (strain[i+3] - referenceStrain[i+3]) * K_[i];
return stress;
-}
+ }
-template<class Basis, class LocalInterpolationRule, class RT>
-void CosseratRodEnergy<Basis, LocalInterpolationRule, RT>::
-getStrain(const std::vector<RigidBodyMotion<double,3> >& sol,
- BlockVector<FieldVector<double, blocksize> >& strain) const
-{
+ template<class Basis, class LocalInterpolationRule, class RT>
+ void CosseratRodEnergy<Basis, LocalInterpolationRule, RT>::
+ getStrain(const std::vector<RigidBodyMotion<double,3> >& sol,
+ BlockVector<FieldVector<double, blocksize> >& strain) const
+ {
const typename GridView::Traits::IndexSet& indexSet = this->basis_.gridView().indexSet();
if (sol.size()!=this->basis_.size())
- DUNE_THROW(Exception, "Solution vector doesn't match the grid!");
+ DUNE_THROW(Exception, "Solution vector doesn't match the grid!");
// Strain defined on each element
strain.resize(indexSet.size(0));
@@ -324,49 +324,49 @@ getStrain(const std::vector<RigidBodyMotion<double,3> >& sol,
// Loop over all elements
for (const auto& element : elements(this->basis_.gridView()))
{
- int elementIdx = indexSet.index(element);
+ int elementIdx = indexSet.index(element);
- // Extract local solution on this element
- Dune::LagrangeSimplexLocalFiniteElement<double, double, 1, 1> localFiniteElement;
- int numOfBaseFct = localFiniteElement.localCoefficients().size();
+ // Extract local solution on this element
+ Dune::LagrangeSimplexLocalFiniteElement<double, double, 1, 1> localFiniteElement;
+ int numOfBaseFct = localFiniteElement.localCoefficients().size();
- std::vector<RigidBodyMotion<double,3> > localSolution(2);
+ std::vector<RigidBodyMotion<double,3> > localSolution(2);
- for (int i=0; i<numOfBaseFct; i++)
- localSolution[i] = sol[indexSet.subIndex(element,i,1)];
+ for (int i=0; i<numOfBaseFct; i++)
+ localSolution[i] = sol[indexSet.subIndex(element,i,1)];
- // Get quadrature rule
- const int polOrd = 2;
- const auto& quad = QuadratureRules<double, 1>::rule(element.type(), polOrd);
+ // Get quadrature rule
+ const int polOrd = 2;
+ const auto& quad = QuadratureRules<double, 1>::rule(element.type(), polOrd);
- for (std::size_t pt=0; pt<quad.size(); pt++)
- {
- // Local position of the quadrature point
- const auto quadPos = quad[pt].position();
+ for (std::size_t pt=0; pt<quad.size(); pt++)
+ {
+ // Local position of the quadrature point
+ const auto quadPos = quad[pt].position();
- double weight = quad[pt].weight() * element.geometry().integrationElement(quadPos);
+ double weight = quad[pt].weight() * element.geometry().integrationElement(quadPos);
- auto localStrain = getStrain(localSolution, element, quad[pt].position());
+ auto localStrain = getStrain(localSolution, element, quad[pt].position());
- // Sum it all up
- strain[elementIdx].axpy(weight, localStrain);
- }
+ // Sum it all up
+ strain[elementIdx].axpy(weight, localStrain);
+ }
- // /////////////////////////////////////////////////////////////////////////
- // We want the average strain per element. Therefore we have to divide
- // the integral we just computed by the element volume.
- // /////////////////////////////////////////////////////////////////////////
- // we know the element is a line, therefore the integration element is the volume
- FieldVector<double,1> dummyPos(0.5);
- strain[elementIdx] /= element.geometry().integrationElement(dummyPos);
+ // /////////////////////////////////////////////////////////////////////////
+ // We want the average strain per element. Therefore we have to divide
+ // the integral we just computed by the element volume.
+ // /////////////////////////////////////////////////////////////////////////
+ // we know the element is a line, therefore the integration element is the volume
+ FieldVector<double,1> dummyPos(0.5);
+ strain[elementIdx] /= element.geometry().integrationElement(dummyPos);
}
-}
+ }
-template<class Basis, class LocalInterpolationRule, class RT>
-void CosseratRodEnergy<Basis, LocalInterpolationRule, RT>::
-getStress(const std::vector<RigidBodyMotion<double,3> >& sol,
- BlockVector<FieldVector<double, blocksize> >& stress) const
-{
+ template<class Basis, class LocalInterpolationRule, class RT>
+ void CosseratRodEnergy<Basis, LocalInterpolationRule, RT>::
+ getStress(const std::vector<RigidBodyMotion<double,3> >& sol,
+ BlockVector<FieldVector<double, blocksize> >& stress) const
+ {
// Get the strain
getStrain(sol,stress);
@@ -377,24 +377,24 @@ getStress(const std::vector<RigidBodyMotion<double,3> >& sol,
// Linear diagonal constitutive law
for (size_t i=0; i<stress.size(); i++)
{
- for (int j=0; j<3; j++)
- {
- stress[i][j] = (stress[i][j] - referenceStrain[i][j]) * A_[j];
- stress[i][j+3] = (stress[i][j+3] - referenceStrain[i][j+3]) * K_[j];
- }
+ for (int j=0; j<3; j++)
+ {
+ stress[i][j] = (stress[i][j] - referenceStrain[i][j]) * A_[j];
+ stress[i][j+3] = (stress[i][j+3] - referenceStrain[i][j+3]) * K_[j];
+ }
}
-}
-
-template<class Basis, class LocalInterpolationRule, class RT>
-template <class PatchGridView>
-auto CosseratRodEnergy<Basis, LocalInterpolationRule, RT>::
-getResultantForce(const BoundaryPatch<PatchGridView>& boundary,
- const std::vector<RigidBodyMotion<double,3> >& sol) const
-{
+ }
+
+ template<class Basis, class LocalInterpolationRule, class RT>
+ template <class PatchGridView>
+ auto CosseratRodEnergy<Basis, LocalInterpolationRule, RT>::
+ getResultantForce(const BoundaryPatch<PatchGridView>& boundary,
+ const std::vector<RigidBodyMotion<double,3> >& sol) const
+ {
const typename GridView::Traits::IndexSet& indexSet = this->basis_.gridView().indexSet();
if (sol.size()!=indexSet.size(1))
- DUNE_THROW(Exception, "Solution vector doesn't match the grid!");
+ DUNE_THROW(Exception, "Solution vector doesn't match the grid!");
FieldVector<double,3> canonicalStress(0);
FieldVector<double,3> canonicalTorque(0);
@@ -402,57 +402,56 @@ getResultantForce(const BoundaryPatch<PatchGridView>& boundary,
// Loop over the given boundary
for (auto facet : boundary)
{
- // //////////////////////////////////////////////
- // Compute force across this boundary face
- // //////////////////////////////////////////////
+ // //////////////////////////////////////////////
+ // Compute force across this boundary face
+ // //////////////////////////////////////////////
- double pos = facet.geometryInInside().corner(0);
+ double pos = facet.geometryInInside().corner(0);
- std::vector<RigidBodyMotion<double,3> > localSolution(2);
- localSolution[0] = sol[indexSet.subIndex(*facet.inside(),0,1)];
- localSolution[1] = sol[indexSet.subIndex(*facet.inside(),1,1)];
+ std::vector<RigidBodyMotion<double,3> > localSolution(2);
+ localSolution[0] = sol[indexSet.subIndex(*facet.inside(),0,1)];
+ localSolution[1] = sol[indexSet.subIndex(*facet.inside(),1,1)];
- std::vector<RigidBodyMotion<double,3> > localRefConf(2);
- localRefConf[0] = referenceConfiguration_[indexSet.subIndex(*facet.inside(),0,1)];
- localRefConf[1] = referenceConfiguration_[indexSet.subIndex(*facet.inside(),1,1)];
+ std::vector<RigidBodyMotion<double,3> > localRefConf(2);
+ localRefConf[0] = referenceConfiguration_[indexSet.subIndex(*facet.inside(),0,1)];
+ localRefConf[1] = referenceConfiguration_[indexSet.subIndex(*facet.inside(),1,1)];
- auto strain = getStrain(localSolution, *facet.inside(), pos);
- auto referenceStrain = getStrain(localRefConf, *facet.inside(), pos);
+ auto strain = getStrain(localSolution, *facet.inside(), pos);
+ auto referenceStrain = getStrain(localRefConf, *facet.inside(), pos);
- FieldVector<double,3> localStress;
- for (int i=0; i<3; i++)
- localStress[i] = (strain[i] - referenceStrain[i]) * A_[i];
+ FieldVector<double,3> localStress;
+ for (int i=0; i<3; i++)
+ localStress[i] = (strain[i] - referenceStrain[i]) * A_[i];
- FieldVector<double,3> localTorque;
- for (int i=0; i<3; i++)
- localTorque[i] = (strain[i+3] - referenceStrain[i+3]) * K_[i];
+ FieldVector<double,3> localTorque;
+ for (int i=0; i<3; i++)
+ localTorque[i] = (strain[i+3] - referenceStrain[i+3]) * K_[i];
- // Transform stress given with respect to the basis given by the three directors to
- // the canonical basis of R^3
+ // Transform stress given with respect to the basis given by the three directors to
+ // the canonical basis of R^3
- FieldMatrix<double,3,3> orientationMatrix;
- sol[indexSet.subIndex(*facet.inside(),facet.indexInInside(),1)].q.matrix(orientationMatrix);
+ FieldMatrix<double,3,3> orientationMatrix;
+ sol[indexSet.subIndex(*facet.inside(),facet.indexInInside(),1)].q.matrix(orientationMatrix);
- orientationMatrix.umv(localStress, canonicalStress);
+ orientationMatrix.umv(localStress, canonicalStress);
- orientationMatrix.umv(localTorque, canonicalTorque);
+ orientationMatrix.umv(localTorque, canonicalTorque);
- // Multiply force times boundary normal to get the transmitted force
- canonicalStress *= facet.unitOuterNormal(FieldVector<double,0>(0))[0];
- canonicalTorque *= facet.unitOuterNormal(FieldVector<double,0>(0))[0];
+ // Multiply force times boundary normal to get the transmitted force
+ canonicalStress *= facet.unitOuterNormal(FieldVector<double,0>(0))[0];
+ canonicalTorque *= facet.unitOuterNormal(FieldVector<double,0>(0))[0];
}
FieldVector<double,6> result;
for (int i=0; i<3; i++)
{
- result[i] = canonicalStress[i];
- result[i+3] = canonicalTorque[i];
+ result[i] = canonicalStress[i];
+ result[i+3] = canonicalTorque[i];
}
return result;
-}
+ }
} // namespace Dune::GFE
#endif
-
diff --git a/dune/gfe/assemblers/geodesicfeassembler.hh b/dune/gfe/assemblers/geodesicfeassembler.hh
index 01d0d279..f75264cf 100644
--- a/dune/gfe/assemblers/geodesicfeassembler.hh
+++ b/dune/gfe/assemblers/geodesicfeassembler.hh
@@ -15,83 +15,83 @@
template <class Basis, class TargetSpace>
class GeodesicFEAssembler {
- using field_type = typename TargetSpace::field_type;
- typedef typename Basis::GridView GridView;
- using LocalStiffness = LocalGeodesicFEStiffness<Basis, TargetSpace>;
+ using field_type = typename TargetSpace::field_type;
+ typedef typename Basis::GridView GridView;
+ using LocalStiffness = LocalGeodesicFEStiffness<Basis, TargetSpace>;
- //! Dimension of the grid.
- constexpr static int gridDim = GridView::dimension;
+ //! Dimension of the grid.
+ constexpr static int gridDim = GridView::dimension;
- //! Dimension of a tangent space
- constexpr static int blocksize = TargetSpace::TangentVector::dimension;
+ //! Dimension of a tangent space
+ constexpr static int blocksize = TargetSpace::TangentVector::dimension;
- //!
- typedef Dune::FieldMatrix<double, blocksize, blocksize> MatrixBlock;
+ //!
+ typedef Dune::FieldMatrix<double, blocksize, blocksize> MatrixBlock;
protected:
- //! The global basis
- const Basis basis_;
+ //! The global basis
+ const Basis basis_;
- //! The local stiffness operator
- std::shared_ptr<LocalStiffness> localStiffness_;
+ //! The local stiffness operator
+ std::shared_ptr<LocalStiffness> localStiffness_;
public:
- /** \brief Constructor for a given grid */
- GeodesicFEAssembler(const Basis& basis)
- : basis_(basis)
- {}
-
- /** \brief Constructor for a given grid */
- template <class LocalStiffnessT>
- GeodesicFEAssembler(const Basis& basis,
- LocalStiffnessT&& localStiffness)
- : basis_(basis),
- localStiffness_(Dune::Solvers::wrap_own_share<LocalStiffness>(std::forward<LocalStiffnessT>(localStiffness)))
- {}
-
- /** \brief Set the local stiffness assembler. This can be a temporary, l-value or shared pointer. */
- template <class LocalStiffnessT>
- void setLocalStiffness(LocalStiffnessT&& localStiffness) {
- localStiffness_ = Dune::Solvers::wrap_own_share<LocalStiffness>(std::forward<LocalStiffnessT>(localStiffness));
- }
-
- /** \brief Get the local stiffness operator. */
- const LocalStiffness& getLocalStiffness() const {
- return *localStiffness_;
- }
-
- /** \brief Get the local stiffness operator. */
- LocalStiffness& getLocalStiffness() {
- return *localStiffness_;
- }
-
- /** \brief Get the basis. */
- const Basis& getBasis() const {
- return basis_;
- }
-
- /** \brief Assemble the tangent stiffness matrix and the functional gradient together
- *
- * This is more efficient than computing them separately, because you need the gradient
- * anyway to compute the Riemannian Hessian.
- */
- virtual void assembleGradientAndHessian(const std::vector<TargetSpace>& sol,
- Dune::BlockVector<Dune::FieldVector<field_type, blocksize> >& gradient,
- Dune::BCRSMatrix<MatrixBlock>& hessian,
- bool computeOccupationPattern=true) const;
-
- /** \brief Assemble the gradient */
- virtual void assembleGradient(const std::vector<TargetSpace>& sol,
- Dune::BlockVector<Dune::FieldVector<double, blocksize> >& grad) const;
-
- /** \brief Compute the energy of a deformation state */
- virtual double computeEnergy(const std::vector<TargetSpace>& sol) const;
-
- //protected:
- void getNeighborsPerVertex(Dune::MatrixIndexSet& nb) const;
+ /** \brief Constructor for a given grid */
+ GeodesicFEAssembler(const Basis& basis)
+ : basis_(basis)
+ {}
+
+ /** \brief Constructor for a given grid */
+ template <class LocalStiffnessT>
+ GeodesicFEAssembler(const Basis& basis,
+ LocalStiffnessT&& localStiffness)
+ : basis_(basis),
+ localStiffness_(Dune::Solvers::wrap_own_share<LocalStiffness>(std::forward<LocalStiffnessT>(localStiffness)))
+ {}
+
+ /** \brief Set the local stiffness assembler. This can be a temporary, l-value or shared pointer. */
+ template <class LocalStiffnessT>
+ void setLocalStiffness(LocalStiffnessT&& localStiffness) {
+ localStiffness_ = Dune::Solvers::wrap_own_share<LocalStiffness>(std::forward<LocalStiffnessT>(localStiffness));
+ }
+
+ /** \brief Get the local stiffness operator. */
+ const LocalStiffness& getLocalStiffness() const {
+ return *localStiffness_;
+ }
+
+ /** \brief Get the local stiffness operator. */
+ LocalStiffness& getLocalStiffness() {
+ return *localStiffness_;
+ }
+
+ /** \brief Get the basis. */
+ const Basis& getBasis() const {
+ return basis_;
+ }
+
+ /** \brief Assemble the tangent stiffness matrix and the functional gradient together
+ *
+ * This is more efficient than computing them separately, because you need the gradient
+ * anyway to compute the Riemannian Hessian.
+ */
+ virtual void assembleGradientAndHessian(const std::vector<TargetSpace>& sol,
+ Dune::BlockVector<Dune::FieldVector<field_type, blocksize> >& gradient,
+ Dune::BCRSMatrix<MatrixBlock>& hessian,
+ bool computeOccupationPattern=true) const;
+
+ /** \brief Assemble the gradient */
+ virtual void assembleGradient(const std::vector<TargetSpace>& sol,
+ Dune::BlockVector<Dune::FieldVector<double, blocksize> >& grad) const;
+
+ /** \brief Compute the energy of a deformation state */
+ virtual double computeEnergy(const std::vector<TargetSpace>& sol) const;
+
+ //protected:
+ void getNeighborsPerVertex(Dune::MatrixIndexSet& nb) const;
}; // end class
@@ -101,35 +101,35 @@ template <class Basis, class TargetSpace>
void GeodesicFEAssembler<Basis,TargetSpace>::
getNeighborsPerVertex(Dune::MatrixIndexSet& nb) const
{
- auto n = basis_.size();
-
- nb.resize(n, n);
+ auto n = basis_.size();
- // A view on the FE basis on a single element
- auto localView = basis_.localView();
+ nb.resize(n, n);
- for (const auto& element : elements(basis_.gridView(), Dune::Partitions::interior))
- {
- // Bind the local FE basis view to the current element
- localView.bind(element);
+ // A view on the FE basis on a single element
+ auto localView = basis_.localView();
- const auto& lfe = localView.tree().finiteElement();
+ for (const auto& element : elements(basis_.gridView(), Dune::Partitions::interior))
+ {
+ // Bind the local FE basis view to the current element
+ localView.bind(element);
- for (size_t i=0; i<lfe.size(); i++) {
+ const auto& lfe = localView.tree().finiteElement();
- for (size_t j=0; j<lfe.size(); j++) {
+ for (size_t i=0; i<lfe.size(); i++) {
- auto iIdx = localView.index(i);
- auto jIdx = localView.index(j);
+ for (size_t j=0; j<lfe.size(); j++) {
- nb.add(iIdx, jIdx);
+ auto iIdx = localView.index(i);
+ auto jIdx = localView.index(j);
- }
+ nb.add(iIdx, jIdx);
- }
+ }
}
+ }
+
}
template <class Basis, class TargetSpace>
@@ -139,57 +139,57 @@ assembleGradientAndHessian(const std::vector<TargetSpace>& sol,
Dune::BCRSMatrix<MatrixBlock>& hessian,
bool computeOccupationPattern) const
{
- if (computeOccupationPattern) {
+ if (computeOccupationPattern) {
- Dune::MatrixIndexSet neighborsPerVertex;
- getNeighborsPerVertex(neighborsPerVertex);
- neighborsPerVertex.exportIdx(hessian);
+ Dune::MatrixIndexSet neighborsPerVertex;
+ getNeighborsPerVertex(neighborsPerVertex);
+ neighborsPerVertex.exportIdx(hessian);
- }
+ }
- hessian = 0;
+ hessian = 0;
- gradient.resize(sol.size());
- gradient = 0;
+ gradient.resize(sol.size());
+ gradient = 0;
- // A view on the FE basis on a single element
- auto localView = basis_.localView();
+ // A view on the FE basis on a single element
+ auto localView = basis_.localView();
- for (const auto& element : elements(basis_.gridView(), Dune::Partitions::interior))
- {
- localView.bind(element);
+ for (const auto& element : elements(basis_.gridView(), Dune::Partitions::interior))
+ {
+ localView.bind(element);
- const int numOfBaseFct = localView.tree().size();
+ const int numOfBaseFct = localView.tree().size();
- // Extract local solution
- std::vector<TargetSpace> localSolution(numOfBaseFct);
+ // Extract local solution
+ std::vector<TargetSpace> localSolution(numOfBaseFct);
- for (int i=0; i<numOfBaseFct; i++)
- localSolution[i] = sol[localView.index(i)];
+ for (int i=0; i<numOfBaseFct; i++)
+ localSolution[i] = sol[localView.index(i)];
- std::vector<Dune::FieldVector<double,blocksize> > localGradient(numOfBaseFct);
+ std::vector<Dune::FieldVector<double,blocksize> > localGradient(numOfBaseFct);
- // setup local matrix and gradient
- localStiffness_->assembleGradientAndHessian(localView, localSolution, localGradient);
+ // setup local matrix and gradient
+ localStiffness_->assembleGradientAndHessian(localView, localSolution, localGradient);
- // Add element matrix to global stiffness matrix
- for(int i=0; i<numOfBaseFct; i++) {
+ // Add element matrix to global stiffness matrix
+ for(int i=0; i<numOfBaseFct; i++) {
- auto row = localView.index(i);
+ auto row = localView.index(i);
- for (int j=0; j<numOfBaseFct; j++ ) {
+ for (int j=0; j<numOfBaseFct; j++ ) {
- auto col = localView.index(j);
- hessian[row][col] += localStiffness_->A_[i][j];
+ auto col = localView.index(j);
+ hessian[row][col] += localStiffness_->A_[i][j];
- }
- }
+ }
+ }
- // Add local gradient to global gradient
- for (int i=0; i<numOfBaseFct; i++)
- gradient[localView.index(i)] += localGradient[i];
+ // Add local gradient to global gradient
+ for (int i=0; i<numOfBaseFct; i++)
+ gradient[localView.index(i)] += localGradient[i];
- }
+ }
}
@@ -198,38 +198,38 @@ void GeodesicFEAssembler<Basis,TargetSpace>::
assembleGradient(const std::vector<TargetSpace>& sol,
Dune::BlockVector<Dune::FieldVector<double, blocksize> >& grad) const
{
- if (sol.size()!=basis_.size())
- DUNE_THROW(Dune::Exception, "Solution vector doesn't match the grid!");
+ if (sol.size()!=basis_.size())
+ DUNE_THROW(Dune::Exception, "Solution vector doesn't match the grid!");
- grad.resize(sol.size());
- grad = 0;
+ grad.resize(sol.size());
+ grad = 0;
- // A view on the FE basis on a single element
- auto localView = basis_.localView();
+ // A view on the FE basis on a single element
+ auto localView = basis_.localView();
- // Loop over all elements
- for (const auto& element : elements(basis_.gridView(), Dune::Partitions::interior))
- {
- localView.bind(element);
+ // Loop over all elements
+ for (const auto& element : elements(basis_.gridView(), Dune::Partitions::interior))
+ {
+ localView.bind(element);
- // The number of degrees of freedom of the current element
- const auto nDofs = localView.tree().size();
+ // The number of degrees of freedom of the current element
+ const auto nDofs = localView.tree().size();
- // Extract local solution
- std::vector<TargetSpace> localSolution(nDofs);
+ // Extract local solution
+ std::vector<TargetSpace> localSolution(nDofs);
- for (size_t i=0; i<nDofs; i++)
- localSolution[i] = sol[localView.index(i)];
+ for (size_t i=0; i<nDofs; i++)
+ localSolution[i] = sol[localView.index(i)];
- // Assemble local gradient
- std::vector<Dune::FieldVector<double,blocksize> > localGradient(nDofs);
+ // Assemble local gradient
+ std::vector<Dune::FieldVector<double,blocksize> > localGradient(nDofs);
- localStiffness_->assembleGradient(localView, localSolution, localGradient);
+ localStiffness_->assembleGradient(localView, localSolution, localGradient);
- // Add to global gradient
- for (size_t i=0; i<nDofs; i++)
- grad[localView.index(i)[0]] += localGradient[i];
- }
+ // Add to global gradient
+ for (size_t i=0; i<nDofs; i++)
+ grad[localView.index(i)[0]] += localGradient[i];
+ }
}
@@ -238,36 +238,35 @@ template <class Basis, class TargetSpace>
double GeodesicFEAssembler<Basis, TargetSpace>::
computeEnergy(const std::vector<TargetSpace>& sol) const
{
- double energy = 0;
+ double energy = 0;
- if (sol.size() != basis_.size())
- DUNE_THROW(Dune::Exception, "Coefficient vector doesn't match the function space basis!");
+ if (sol.size() != basis_.size())
+ DUNE_THROW(Dune::Exception, "Coefficient vector doesn't match the function space basis!");
- // A view on the FE basis on a single element
- auto localView = basis_.localView();
+ // A view on the FE basis on a single element
+ auto localView = basis_.localView();
- // Loop over all elements
- for (const auto& element : elements(basis_.gridView(), Dune::Partitions::interior))
- {
- localView.bind(element);
+ // Loop over all elements
+ for (const auto& element : elements(basis_.gridView(), Dune::Partitions::interior))
+ {
+ localView.bind(element);
- // Number of degrees of freedom on this element
- size_t nDofs = localView.tree().size();
+ // Number of degrees of freedom on this element
+ size_t nDofs = localView.tree().size();
- std::vector<TargetSpace> localSolution(nDofs);
+ std::vector<TargetSpace> localSolution(nDofs);
- for (size_t i=0; i<nDofs; i++)
- localSolution[i] = sol[localView.index(i)[0]];
+ for (size_t i=0; i<nDofs; i++)
+ localSolution[i] = sol[localView.index(i)[0]];
- energy += localStiffness_->energy(localView, localSolution);
+ energy += localStiffness_->energy(localView, localSolution);
- }
+ }
- return energy;
+ return energy;
}
#endif
-
diff --git a/dune/gfe/assemblers/geodesicfeassemblerwrapper.hh b/dune/gfe/assemblers/geodesicfeassemblerwrapper.hh
index 3294bb50..e6a3fdda 100644
--- a/dune/gfe/assemblers/geodesicfeassemblerwrapper.hh
+++ b/dune/gfe/assemblers/geodesicfeassemblerwrapper.hh
@@ -8,14 +8,14 @@
namespace Dune::GFE {
-/** \brief A wrapper that wraps a MixedGFEAssembler into an assembler that does not distinguish between the two finite element spaces
+ /** \brief A wrapper that wraps a MixedGFEAssembler into an assembler that does not distinguish between the two finite element spaces
- It reimplements the same methods as these two and transfers the structure of the gradient and the Hessian
- */
+ It reimplements the same methods as these two and transfers the structure of the gradient and the Hessian
+ */
-template <class Basis, class ScalarBasis, class TargetSpace, class MixedSpace0, class MixedSpace1>
-class
-GeodesicFEAssemblerWrapper {
+ template <class Basis, class ScalarBasis, class TargetSpace, class MixedSpace0, class MixedSpace1>
+ class
+ GeodesicFEAssemblerWrapper {
typedef typename Basis::GridView GridView;
@@ -31,21 +31,21 @@ GeodesicFEAssemblerWrapper {
typedef Dune::FieldMatrix<double, blocksize, blocksize> MatrixBlock;
typedef typename MixedGFEAssembler<Basis, MixedSpace0, MixedSpace1>::MatrixType MatrixType;
-protected:
+ protected:
MixedGFEAssembler<Basis, MixedSpace0, MixedSpace1>* mixedAssembler_;
-public:
+ public:
const ScalarBasis& basis_;
/** \brief Constructor for a given grid */
GeodesicFEAssemblerWrapper(MixedGFEAssembler<Basis, MixedSpace0, MixedSpace1>* mixedAssembler, ScalarBasis& basis)
- : mixedAssembler_(mixedAssembler),
- basis_(basis)
+ : mixedAssembler_(mixedAssembler),
+ basis_(basis)
{
- hessianMixed_ = std::make_unique<MatrixType>();
- // The two spaces from the mixed version need to have the same embeddedDim as the Target Space
- assert(MixedSpace0::embeddedDim + MixedSpace1::embeddedDim == TargetSpace::embeddedDim);
- assert(blocksize0 + blocksize1 == blocksize);
+ hessianMixed_ = std::make_unique<MatrixType>();
+ // The two spaces from the mixed version need to have the same embeddedDim as the Target Space
+ assert(MixedSpace0::embeddedDim + MixedSpace1::embeddedDim == TargetSpace::embeddedDim);
+ assert(blocksize0 + blocksize1 == blocksize);
}
/** \brief Assemble the tangent stiffness matrix and the functional gradient together
@@ -66,56 +66,56 @@ public:
/** \brief Get the basis. */
const ScalarBasis& getBasis() const {
- return basis_;
+ return basis_;
}
-private:
- Dune::TupleVector<std::vector<MixedSpace0>,std::vector<MixedSpace1>> splitVector(const std::vector<TargetSpace>& sol) const;
+ private:
+ Dune::TupleVector<std::vector<MixedSpace0>,std::vector<MixedSpace1> > splitVector(const std::vector<TargetSpace>& sol) const;
std::unique_ptr<MatrixType> hessianMixed_;
-}; // end class
+ }; // end class
} //end namespace
template <class Basis, class ScalarBasis, class TargetSpace, class MixedSpace0, class MixedSpace1>
-Dune::TupleVector<std::vector<MixedSpace0>,std::vector<MixedSpace1>> Dune::GFE::GeodesicFEAssemblerWrapper<Basis, ScalarBasis, TargetSpace,MixedSpace0,MixedSpace1>::
+Dune::TupleVector<std::vector<MixedSpace0>,std::vector<MixedSpace1> > Dune::GFE::GeodesicFEAssemblerWrapper<Basis, ScalarBasis, TargetSpace,MixedSpace0,MixedSpace1>::
splitVector(const std::vector<TargetSpace>& sol) const {
- using namespace Indices;
- // Split the solution into the Deformation and the Rotational part
- auto n = basis_.size();
- assert (sol.size() == n);
- Dune::TupleVector<std::vector<MixedSpace0>,std::vector<MixedSpace1>> solutionSplit;
- solutionSplit[_0].resize(n);
- solutionSplit[_1].resize(n);
- for (std::size_t i = 0; i < n; i++) {
- if constexpr(std::is_base_of<TargetSpace,RigidBodyMotion<double, 3>>::value) {
- solutionSplit[_0][i] = sol[i].r; // Deformation part
- solutionSplit[_1][i] = sol[i].q; // Rotational part
- } else if constexpr(std::is_base_of<TargetSpace,ProductManifold<RealTuple<double,3>,UnitVector<double,3>>>::value) {
- solutionSplit[_0][i] = sol[i][_0]; // Deformation part
- solutionSplit[_1][i] = sol[i][_1]; // Rotational part
- }
+ using namespace Indices;
+ // Split the solution into the Deformation and the Rotational part
+ auto n = basis_.size();
+ assert (sol.size() == n);
+ Dune::TupleVector<std::vector<MixedSpace0>,std::vector<MixedSpace1> > solutionSplit;
+ solutionSplit[_0].resize(n);
+ solutionSplit[_1].resize(n);
+ for (std::size_t i = 0; i < n; i++) {
+ if constexpr(std::is_base_of<TargetSpace,RigidBodyMotion<double, 3> >::value) {
+ solutionSplit[_0][i] = sol[i].r; // Deformation part
+ solutionSplit[_1][i] = sol[i].q; // Rotational part
+ } else if constexpr(std::is_base_of<TargetSpace,ProductManifold<RealTuple<double,3>,UnitVector<double,3> > >::value) {
+ solutionSplit[_0][i] = sol[i][_0]; // Deformation part
+ solutionSplit[_1][i] = sol[i][_1]; // Rotational part
}
- return solutionSplit;
+ }
+ return solutionSplit;
}
template <class Basis, class ScalarBasis, class TargetSpace, class MixedSpace0, class MixedSpace1>
void Dune::GFE::GeodesicFEAssemblerWrapper<Basis, ScalarBasis, TargetSpace,MixedSpace0,MixedSpace1>::
getNeighborsPerVertex(Dune::MatrixIndexSet& nb) const
{
- auto n = basis_.size();
- nb.resize(n, n);
- //Retrieve occupation structure for the mixed space and convert it to the non-mixed space
- //In the mixed space, each index set is for one part of the composite basis
- //So: nb00 is for the displacement part, nb11 is for the rotation part and nb01 and nb10 (where nb01^T = nb10) is for the coupling
- Dune::MatrixIndexSet nb00, nb01, nb10, nb11;
- mixedAssembler_->getMatrixPattern(nb00, nb01, nb10, nb11);
- auto size0 = nb00.rows();
- auto size1 = nb11.rows();
- assert(size0 == size1);
- assert(size0 == n);
- //After checking if the sizes match, we can just copy over the occupation pattern
- //as all occupation patterns work on the same basis combination, so they are all equal
- nb = nb00;
+ auto n = basis_.size();
+ nb.resize(n, n);
+ //Retrieve occupation structure for the mixed space and convert it to the non-mixed space
+ //In the mixed space, each index set is for one part of the composite basis
+ //So: nb00 is for the displacement part, nb11 is for the rotation part and nb01 and nb10 (where nb01^T = nb10) is for the coupling
+ Dune::MatrixIndexSet nb00, nb01, nb10, nb11;
+ mixedAssembler_->getMatrixPattern(nb00, nb01, nb10, nb11);
+ auto size0 = nb00.rows();
+ auto size1 = nb11.rows();
+ assert(size0 == size1);
+ assert(size0 == n);
+ //After checking if the sizes match, we can just copy over the occupation pattern
+ //as all occupation patterns work on the same basis combination, so they are all equal
+ nb = nb00;
}
template <class Basis, class ScalarBasis, class TargetSpace, class MixedSpace0, class MixedSpace1>
@@ -125,77 +125,77 @@ assembleGradientAndHessian(const std::vector<TargetSpace>& sol,
Dune::BCRSMatrix<MatrixBlock>& hessian,
bool computeOccupationPattern) const
{
- using namespace Dune::TypeTree::Indices;
- auto n = basis_.size();
-
- // Get a split up version of the input
- auto solutionSplit = splitVector(sol);
-
- // Define the matrix and the gradient in the block structure
- Dune::BlockVector<Dune::FieldVector<double, blocksize0> > gradient0(n);
- Dune::BlockVector<Dune::FieldVector<double, blocksize1> > gradient1(n);
-
- if (computeOccupationPattern) {
- Dune::MatrixIndexSet neighborsPerVertex;
- getNeighborsPerVertex(neighborsPerVertex);
- neighborsPerVertex.exportIdx((*hessianMixed_)[_0][_0]);
- neighborsPerVertex.exportIdx((*hessianMixed_)[_0][_1]);
- neighborsPerVertex.exportIdx((*hessianMixed_)[_1][_0]);
- neighborsPerVertex.exportIdx((*hessianMixed_)[_1][_1]);
- neighborsPerVertex.exportIdx(hessian);
- }
-
- *hessianMixed_ = 0;
- mixedAssembler_->assembleGradientAndHessian(solutionSplit[_0], solutionSplit[_1], gradient0, gradient1, *hessianMixed_, false);
-
- // Transform gradient and hessian back to the non-mixed structure
- hessian = 0;
- gradient.resize(n);
- gradient = 0;
- for (std::size_t i = 0; i < n; i++) {
- for (int j = 0; j < blocksize0 + blocksize1; j++)
- gradient[i][j] = j < blocksize0 ? gradient0[i][j] : gradient1[i][j - blocksize0];
- }
-
- // All 4 matrices are nxn;
- // Each FieldMatrix in (*hessianMixed_)[_0][_0] is blocksize0 x blocksize0
- // Each FieldMatrix in (*hessianMixed_)[_1][_0] is blocksize1 x blocksize0
- // Each FieldMatrix in (*hessianMixed_)[_0][_1] is blocksize0 x blocksize1
- // Each FieldMatrix in (*hessianMixed_)[_1][_1] is blocksize1 x blocksize1
- // The hessian will then be a nxn matrix where each FieldMatrix is (blocksize0+blocksize1)x(blocksize0+blocksize1)
-
- for (size_t l = 0; l < blocksize0; l++) {
- // Extract Upper Left Block of mixed matrix
- for (auto rowIt = (*hessianMixed_)[_0][_0].begin(); rowIt != (*hessianMixed_)[_0][_0].end(); ++rowIt)
- for (auto colIt = rowIt->begin(); colIt != rowIt->end(); ++colIt)
- for(size_t k = 0; k < blocksize0; k++)
- hessian[rowIt.index()][colIt.index()][k][l] = (*colIt)[k][l];
- // Extract Lower Left Block of mixed matrix
- for (auto rowIt = (*hessianMixed_)[_1][_0].begin(); rowIt != (*hessianMixed_)[_1][_0].end(); ++rowIt)
- for (auto colIt = rowIt->begin(); colIt != rowIt->end(); ++colIt)
- for(size_t k = 0; k < blocksize1; k++)
- hessian[rowIt.index()][colIt.index()][k + blocksize0][l] = (*colIt)[k][l];
- }
- for (size_t l = 0; l < blocksize1; l++) {
- // Extract Upper Right Block of mixed matrix
- for (auto rowIt = (*hessianMixed_)[_0][_1].begin(); rowIt != (*hessianMixed_)[_0][_1].end(); ++rowIt)
- for (auto colIt = rowIt->begin(); colIt != rowIt->end(); ++colIt)
- for(size_t k = 0; k < blocksize0; k++)
- hessian[rowIt.index()][colIt.index()][k][l + blocksize0] = (*colIt)[k][l];
- // Extract Lower Right Block of mixed matrix
- for (auto rowIt = (*hessianMixed_)[_1][_1].begin(); rowIt != (*hessianMixed_)[_1][_1].end(); ++rowIt)
- for (auto colIt = rowIt->begin(); colIt != rowIt->end(); ++colIt)
- for(size_t k = 0; k < blocksize1; k++)
- hessian[rowIt.index()][colIt.index()][k + blocksize0][l + blocksize0] = (*colIt)[k][l];
- }
+ using namespace Dune::TypeTree::Indices;
+ auto n = basis_.size();
+
+ // Get a split up version of the input
+ auto solutionSplit = splitVector(sol);
+
+ // Define the matrix and the gradient in the block structure
+ Dune::BlockVector<Dune::FieldVector<double, blocksize0> > gradient0(n);
+ Dune::BlockVector<Dune::FieldVector<double, blocksize1> > gradient1(n);
+
+ if (computeOccupationPattern) {
+ Dune::MatrixIndexSet neighborsPerVertex;
+ getNeighborsPerVertex(neighborsPerVertex);
+ neighborsPerVertex.exportIdx((*hessianMixed_)[_0][_0]);
+ neighborsPerVertex.exportIdx((*hessianMixed_)[_0][_1]);
+ neighborsPerVertex.exportIdx((*hessianMixed_)[_1][_0]);
+ neighborsPerVertex.exportIdx((*hessianMixed_)[_1][_1]);
+ neighborsPerVertex.exportIdx(hessian);
+ }
+
+ *hessianMixed_ = 0;
+ mixedAssembler_->assembleGradientAndHessian(solutionSplit[_0], solutionSplit[_1], gradient0, gradient1, *hessianMixed_, false);
+
+ // Transform gradient and hessian back to the non-mixed structure
+ hessian = 0;
+ gradient.resize(n);
+ gradient = 0;
+ for (std::size_t i = 0; i < n; i++) {
+ for (int j = 0; j < blocksize0 + blocksize1; j++)
+ gradient[i][j] = j < blocksize0 ? gradient0[i][j] : gradient1[i][j - blocksize0];
+ }
+
+ // All 4 matrices are nxn;
+ // Each FieldMatrix in (*hessianMixed_)[_0][_0] is blocksize0 x blocksize0
+ // Each FieldMatrix in (*hessianMixed_)[_1][_0] is blocksize1 x blocksize0
+ // Each FieldMatrix in (*hessianMixed_)[_0][_1] is blocksize0 x blocksize1
+ // Each FieldMatrix in (*hessianMixed_)[_1][_1] is blocksize1 x blocksize1
+ // The hessian will then be a nxn matrix where each FieldMatrix is (blocksize0+blocksize1)x(blocksize0+blocksize1)
+
+ for (size_t l = 0; l < blocksize0; l++) {
+ // Extract Upper Left Block of mixed matrix
+ for (auto rowIt = (*hessianMixed_)[_0][_0].begin(); rowIt != (*hessianMixed_)[_0][_0].end(); ++rowIt)
+ for (auto colIt = rowIt->begin(); colIt != rowIt->end(); ++colIt)
+ for(size_t k = 0; k < blocksize0; k++)
+ hessian[rowIt.index()][colIt.index()][k][l] = (*colIt)[k][l];
+ // Extract Lower Left Block of mixed matrix
+ for (auto rowIt = (*hessianMixed_)[_1][_0].begin(); rowIt != (*hessianMixed_)[_1][_0].end(); ++rowIt)
+ for (auto colIt = rowIt->begin(); colIt != rowIt->end(); ++colIt)
+ for(size_t k = 0; k < blocksize1; k++)
+ hessian[rowIt.index()][colIt.index()][k + blocksize0][l] = (*colIt)[k][l];
+ }
+ for (size_t l = 0; l < blocksize1; l++) {
+ // Extract Upper Right Block of mixed matrix
+ for (auto rowIt = (*hessianMixed_)[_0][_1].begin(); rowIt != (*hessianMixed_)[_0][_1].end(); ++rowIt)
+ for (auto colIt = rowIt->begin(); colIt != rowIt->end(); ++colIt)
+ for(size_t k = 0; k < blocksize0; k++)
+ hessian[rowIt.index()][colIt.index()][k][l + blocksize0] = (*colIt)[k][l];
+ // Extract Lower Right Block of mixed matrix
+ for (auto rowIt = (*hessianMixed_)[_1][_1].begin(); rowIt != (*hessianMixed_)[_1][_1].end(); ++rowIt)
+ for (auto colIt = rowIt->begin(); colIt != rowIt->end(); ++colIt)
+ for(size_t k = 0; k < blocksize1; k++)
+ hessian[rowIt.index()][colIt.index()][k + blocksize0][l + blocksize0] = (*colIt)[k][l];
+ }
}
template <class Basis, class ScalarBasis, class TargetSpace, class MixedSpace0, class MixedSpace1>
double Dune::GFE::GeodesicFEAssemblerWrapper<Basis, ScalarBasis, TargetSpace,MixedSpace0,MixedSpace1>::
computeEnergy(const std::vector<TargetSpace>& sol) const
{
- using namespace Dune::TypeTree::Indices;
- auto solutionSplit = splitVector(sol);
- return mixedAssembler_->computeEnergy(solutionSplit[_0], solutionSplit[_1]);
+ using namespace Dune::TypeTree::Indices;
+ auto solutionSplit = splitVector(sol);
+ return mixedAssembler_->computeEnergy(solutionSplit[_0], solutionSplit[_1]);
}
#endif //GLOBAL_GEODESIC_FE_ASSEMBLERWRAPPER_HH
diff --git a/dune/gfe/assemblers/harmonicenergy.hh b/dune/gfe/assemblers/harmonicenergy.hh
index f157a319..e909ee60 100644
--- a/dune/gfe/assemblers/harmonicenergy.hh
+++ b/dune/gfe/assemblers/harmonicenergy.hh
@@ -8,21 +8,21 @@
template<class Basis, class LocalInterpolationRule, class TargetSpace>
class HarmonicEnergy
- : public Dune::GFE::LocalEnergy<Basis,TargetSpace>
+ : public Dune::GFE::LocalEnergy<Basis,TargetSpace>
{
- // grid types
- typedef typename Basis::GridView GridView;
- typedef typename GridView::ctype DT;
- typedef typename TargetSpace::ctype RT;
+ // grid types
+ typedef typename Basis::GridView GridView;
+ typedef typename GridView::ctype DT;
+ typedef typename TargetSpace::ctype RT;
- // some other sizes
- constexpr static int gridDim = GridView::dimension;
+ // some other sizes
+ constexpr static int gridDim = GridView::dimension;
public:
- /** \brief Assemble the energy for a single element */
- RT energy (const typename Basis::LocalView& localView,
- const std::vector<TargetSpace>& localSolution) const override;
+ /** \brief Assemble the energy for a single element */
+ RT energy (const typename Basis::LocalView& localView,
+ const std::vector<TargetSpace>& localSolution) const override;
};
@@ -32,47 +32,46 @@ HarmonicEnergy<Basis, LocalInterpolationRule, TargetSpace>::
energy(const typename Basis::LocalView& localView,
const std::vector<TargetSpace>& localSolution) const
{
- RT energy = 0;
+ RT energy = 0;
- const auto& localFiniteElement = localView.tree().finiteElement();
- LocalInterpolationRule localInterpolationRule(localFiniteElement,localSolution);
+ const auto& localFiniteElement = localView.tree().finiteElement();
+ LocalInterpolationRule localInterpolationRule(localFiniteElement,localSolution);
- int quadOrder = (localFiniteElement.type().isSimplex()) ? (localFiniteElement.localBasis().order()-1) * 2
+ int quadOrder = (localFiniteElement.type().isSimplex()) ? (localFiniteElement.localBasis().order()-1) * 2
: (localFiniteElement.localBasis().order() * gridDim - 1) * 2;
- const auto element = localView.element();
+ const auto element = localView.element();
- const auto& quad = Dune::QuadratureRules<double, gridDim>::rule(localFiniteElement.type(), quadOrder);
+ const auto& quad = Dune::QuadratureRules<double, gridDim>::rule(localFiniteElement.type(), quadOrder);
- for (size_t pt=0; pt<quad.size(); pt++) {
+ for (size_t pt=0; pt<quad.size(); pt++) {
- // Local position of the quadrature point
- const Dune::FieldVector<double,gridDim>& quadPos = quad[pt].position();
+ // Local position of the quadrature point
+ const Dune::FieldVector<double,gridDim>& quadPos = quad[pt].position();
- const auto integrationElement = element.geometry().integrationElement(quadPos);
+ const auto integrationElement = element.geometry().integrationElement(quadPos);
- const auto jacobianInverseTransposed = element.geometry().jacobianInverseTransposed(quadPos);
+ const auto jacobianInverseTransposed = element.geometry().jacobianInverseTransposed(quadPos);
- auto weight = quad[pt].weight() * integrationElement;
+ auto weight = quad[pt].weight() * integrationElement;
- // The derivative of the local function defined on the reference element
- auto referenceDerivative = localInterpolationRule.evaluateDerivative(quadPos);
+ // The derivative of the local function defined on the reference element
+ auto referenceDerivative = localInterpolationRule.evaluateDerivative(quadPos);
- // Compute the Frobenius norm squared of the derivative. This is the correct term
- // if both domain and target space use the metric inherited from an embedding.
- for (size_t i=0; i<jacobianInverseTransposed.N(); i++)
- for (int j=0; j<TargetSpace::embeddedDim; j++)
- {
- RT entry = 0;
- for (size_t k=0; k<jacobianInverseTransposed.M(); k++)
- entry += jacobianInverseTransposed[i][k] * referenceDerivative[j][k];
- energy += weight * entry * entry;
- }
+ // Compute the Frobenius norm squared of the derivative. This is the correct term
+ // if both domain and target space use the metric inherited from an embedding.
+ for (size_t i=0; i<jacobianInverseTransposed.N(); i++)
+ for (int j=0; j<TargetSpace::embeddedDim; j++)
+ {
+ RT entry = 0;
+ for (size_t k=0; k<jacobianInverseTransposed.M(); k++)
+ entry += jacobianInverseTransposed[i][k] * referenceDerivative[j][k];
+ energy += weight * entry * entry;
+ }
- }
+ }
- return 0.5 * energy;
+ return 0.5 * energy;
}
#endif
-
diff --git a/dune/gfe/assemblers/l2distancesquaredenergy.hh b/dune/gfe/assemblers/l2distancesquaredenergy.hh
index 46d526bc..1fe1ff61 100644
--- a/dune/gfe/assemblers/l2distancesquaredenergy.hh
+++ b/dune/gfe/assemblers/l2distancesquaredenergy.hh
@@ -83,4 +83,3 @@ public:
};
#endif
-
diff --git a/dune/gfe/assemblers/localenergy.hh b/dune/gfe/assemblers/localenergy.hh
index d80c0f0f..58c122c5 100644
--- a/dune/gfe/assemblers/localenergy.hh
+++ b/dune/gfe/assemblers/localenergy.hh
@@ -5,35 +5,34 @@
namespace Dune {
-namespace GFE {
-
-/** \brief Base class for energies defined by integrating over one grid element */
-template<class Basis, class... TargetSpaces>
-class LocalEnergy
-{
-public:
- using RT = typename std::common_type<typename TargetSpaces::ctype...>::type;
-
- /** \brief Compute the energy
- *
- * \param localView Local view specifying the current element and the FE space there
- * \param coefficients The coefficients of a FE function on the current element
- */
- virtual RT
- energy (const typename Basis::LocalView& localView,
- const std::vector<TargetSpaces>&... localSolution) const = 0;
-
- /** Empty virtual default destructor
- *
- * To allow proper destruction of derived classes through a base class pointer
- */
- virtual ~LocalEnergy() = default;
-
-};
-
-} // namespace GFE
+ namespace GFE {
+
+ /** \brief Base class for energies defined by integrating over one grid element */
+ template<class Basis, class ... TargetSpaces>
+ class LocalEnergy
+ {
+ public:
+ using RT = typename std::common_type<typename TargetSpaces::ctype...>::type;
+
+ /** \brief Compute the energy
+ *
+ * \param localView Local view specifying the current element and the FE space there
+ * \param coefficients The coefficients of a FE function on the current element
+ */
+ virtual RT
+ energy (const typename Basis::LocalView& localView,
+ const std::vector<TargetSpaces>& ... localSolution) const = 0;
+
+ /** Empty virtual default destructor
+ *
+ * To allow proper destruction of derived classes through a base class pointer
+ */
+ virtual ~LocalEnergy() = default;
+
+ };
+
+ } // namespace GFE
} // namespace Dune
#endif // DUNE_GFE_LOCALENERGY_HH
-
diff --git a/dune/gfe/assemblers/localfirstordermodel.hh b/dune/gfe/assemblers/localfirstordermodel.hh
index 3c937e8a..44f0eaab 100644
--- a/dune/gfe/assemblers/localfirstordermodel.hh
+++ b/dune/gfe/assemblers/localfirstordermodel.hh
@@ -5,24 +5,23 @@
namespace Dune {
-namespace GFE {
+ namespace GFE {
-template<class Basis, class TargetSpace>
-class LocalFirstOrderModel
-: public Dune::GFE::LocalEnergy<Basis,TargetSpace>
-{
-public:
+ template<class Basis, class TargetSpace>
+ class LocalFirstOrderModel
+ : public Dune::GFE::LocalEnergy<Basis,TargetSpace>
+ {
+ public:
- /** \brief Assemble the element gradient of the energy functional */
- virtual void assembleGradient(const typename Basis::LocalView& localView,
- const std::vector<TargetSpace>& solution,
- std::vector<typename TargetSpace::TangentVector>& gradient) const = 0;
+ /** \brief Assemble the element gradient of the energy functional */
+ virtual void assembleGradient(const typename Basis::LocalView& localView,
+ const std::vector<TargetSpace>& solution,
+ std::vector<typename TargetSpace::TangentVector>& gradient) const = 0;
-};
+ };
-} // namespace GFE
+ } // namespace GFE
} // namespace Dune
#endif // DUNE_GFE_LOCALFIRSTORDERMODEL_HH
-
diff --git a/dune/gfe/assemblers/localgeodesicfeadolcstiffness.hh b/dune/gfe/assemblers/localgeodesicfeadolcstiffness.hh
index 3727c6d5..45a56cc1 100644
--- a/dune/gfe/assemblers/localgeodesicfeadolcstiffness.hh
+++ b/dune/gfe/assemblers/localgeodesicfeadolcstiffness.hh
@@ -19,54 +19,54 @@
*/
template<class Basis, class TargetSpace>
class LocalGeodesicFEADOLCStiffness
- : public LocalGeodesicFEStiffness<Basis,TargetSpace>
+ : public LocalGeodesicFEStiffness<Basis,TargetSpace>
{
- // grid types
- typedef typename Basis::GridView GridView;
- typedef typename GridView::ctype DT;
- typedef typename TargetSpace::ctype RT;
- typedef typename GridView::template Codim<0>::Entity Entity;
+ // grid types
+ typedef typename Basis::GridView GridView;
+ typedef typename GridView::ctype DT;
+ typedef typename TargetSpace::ctype RT;
+ typedef typename GridView::template Codim<0>::Entity Entity;
- typedef typename TargetSpace::template rebind<adouble>::other ATargetSpace;
+ typedef typename TargetSpace::template rebind<adouble>::other ATargetSpace;
- // some other sizes
- constexpr static int gridDim = GridView::dimension;
+ // some other sizes
+ constexpr static int gridDim = GridView::dimension;
public:
- //! Dimension of a tangent space
- constexpr static int blocksize = TargetSpace::TangentVector::dimension;
+ //! Dimension of a tangent space
+ constexpr static int blocksize = TargetSpace::TangentVector::dimension;
- //! Dimension of the embedding space
- constexpr static int embeddedBlocksize = TargetSpace::EmbeddedTangentVector::dimension;
+ //! Dimension of the embedding space
+ constexpr static int embeddedBlocksize = TargetSpace::EmbeddedTangentVector::dimension;
- LocalGeodesicFEADOLCStiffness(const Dune::GFE::LocalEnergy<Basis, ATargetSpace>* energy, bool adolcScalarMode = false)
+ LocalGeodesicFEADOLCStiffness(const Dune::GFE::LocalEnergy<Basis, ATargetSpace>* energy, bool adolcScalarMode = false)
: localEnergy_(energy),
- adolcScalarMode_(adolcScalarMode)
- {}
+ adolcScalarMode_(adolcScalarMode)
+ {}
- /** \brief Compute the energy at the current configuration */
- virtual RT energy (const typename Basis::LocalView& localView,
- const std::vector<TargetSpace>& localSolution) const;
+ /** \brief Compute the energy at the current configuration */
+ virtual RT energy (const typename Basis::LocalView& localView,
+ const std::vector<TargetSpace>& localSolution) const;
- /** \brief Assemble the element gradient of the energy functional
+ /** \brief Assemble the element gradient of the energy functional
- This uses the automatic differentiation toolbox ADOL_C.
- */
- virtual void assembleGradient(const typename Basis::LocalView& localView,
- const std::vector<TargetSpace>& solution,
- std::vector<typename TargetSpace::TangentVector>& gradient) const;
+ This uses the automatic differentiation toolbox ADOL_C.
+ */
+ virtual void assembleGradient(const typename Basis::LocalView& localView,
+ const std::vector<TargetSpace>& solution,
+ std::vector<typename TargetSpace::TangentVector>& gradient) const;
- /** \brief Assemble the local stiffness matrix at the current position
+ /** \brief Assemble the local stiffness matrix at the current position
- This uses the automatic differentiation toolbox ADOL_C.
- */
- virtual void assembleGradientAndHessian(const typename Basis::LocalView& localView,
- const std::vector<TargetSpace>& localSolution,
- std::vector<typename TargetSpace::TangentVector>& localGradient);
+ This uses the automatic differentiation toolbox ADOL_C.
+ */
+ virtual void assembleGradientAndHessian(const typename Basis::LocalView& localView,
+ const std::vector<TargetSpace>& localSolution,
+ std::vector<typename TargetSpace::TangentVector>& localGradient);
- const Dune::GFE::LocalEnergy<Basis, ATargetSpace>* localEnergy_;
- const bool adolcScalarMode_;
+ const Dune::GFE::LocalEnergy<Basis, ATargetSpace>* localEnergy_;
+ const bool adolcScalarMode_;
};
@@ -76,51 +76,51 @@ LocalGeodesicFEADOLCStiffness<Basis, TargetSpace>::
energy(const typename Basis::LocalView& localView,
const std::vector<TargetSpace>& localSolution) const
{
- double pureEnergy;
- int rank = localView.globalBasis().gridView().comm().rank();
- std::vector<ATargetSpace> localASolution(localSolution.size());
-
- trace_on(rank);
-
- adouble energy = 0;
-
- // The following loop is not quite intuitive: we copy the localSolution into an
- // array of FieldVector<double>, go from there to FieldVector<adouble> and
- // only then to ATargetSpace.
- // Rationale: The constructor/assignment-from-vector of TargetSpace frequently
- // contains a projection onto the manifold from the surrounding Euclidean space.
- // ADOL-C needs a function on the whole Euclidean space, hence that projection
- // is part of the function and needs to be taped.
-
- // The following variable cannot be declared inside of the loop, or ADOL-C will report wrong results
- // (Presumably because several independent variables use the same memory location.)
- std::vector<typename ATargetSpace::CoordinateType> aRaw(localSolution.size());
- for (size_t i=0; i<localSolution.size(); i++) {
- typename TargetSpace::CoordinateType raw = localSolution[i].globalCoordinates();
- for (size_t j=0; j<raw.size(); j++)
- aRaw[i][j] <<= raw[j];
- localASolution[i] = aRaw[i]; // may contain a projection onto M -- needs to be done in adouble
- }
-
- try {
- energy = localEnergy_->energy(localView,localASolution);
- } catch (Dune::Exception &e) {
- trace_off();
- throw e;
- }
+ double pureEnergy;
+ int rank = localView.globalBasis().gridView().comm().rank();
+ std::vector<ATargetSpace> localASolution(localSolution.size());
+
+ trace_on(rank);
+
+ adouble energy = 0;
+
+ // The following loop is not quite intuitive: we copy the localSolution into an
+ // array of FieldVector<double>, go from there to FieldVector<adouble> and
+ // only then to ATargetSpace.
+ // Rationale: The constructor/assignment-from-vector of TargetSpace frequently
+ // contains a projection onto the manifold from the surrounding Euclidean space.
+ // ADOL-C needs a function on the whole Euclidean space, hence that projection
+ // is part of the function and needs to be taped.
+
+ // The following variable cannot be declared inside of the loop, or ADOL-C will report wrong results
+ // (Presumably because several independent variables use the same memory location.)
+ std::vector<typename ATargetSpace::CoordinateType> aRaw(localSolution.size());
+ for (size_t i=0; i<localSolution.size(); i++) {
+ typename TargetSpace::CoordinateType raw = localSolution[i].globalCoordinates();
+ for (size_t j=0; j<raw.size(); j++)
+ aRaw[i][j] <<= raw[j];
+ localASolution[i] = aRaw[i]; // may contain a projection onto M -- needs to be done in adouble
+ }
+
+ try {
+ energy = localEnergy_->energy(localView,localASolution);
+ } catch (Dune::Exception &e) {
+ trace_off();
+ throw e;
+ }
- energy >>= pureEnergy;
+ energy >>= pureEnergy;
- trace_off();
+ trace_off();
#if 0
- size_t tape_stats[STAT_SIZE];
- tapestats(rank,tape_stats); // reading of tape statistics
- cout<<"maxlive "<<tape_stats[NUM_MAX_LIVES]<<"\n";
- cout<<"tay_stack_size "<<tape_stats[TAY_STACK_SIZE]<<"\n";
- cout<<"total number of operations "<<tape_stats[NUM_OPERATIONS]<<"\n";
- // ..... print other tape stats
+ size_t tape_stats[STAT_SIZE];
+ tapestats(rank,tape_stats); // reading of tape statistics
+ cout<<"maxlive "<<tape_stats[NUM_MAX_LIVES]<<"\n";
+ cout<<"tay_stack_size "<<tape_stats[TAY_STACK_SIZE]<<"\n";
+ cout<<"total number of operations "<<tape_stats[NUM_OPERATIONS]<<"\n";
+ // ..... print other tape stats
#endif
- return pureEnergy;
+ return pureEnergy;
}
@@ -130,41 +130,41 @@ assembleGradient(const typename Basis::LocalView& localView,
const std::vector<TargetSpace>& localSolution,
std::vector<typename TargetSpace::TangentVector>& localGradient) const
{
- // Tape energy computation. We may not have to do this every time, but it's comparatively cheap.
- energy(localView, localSolution);
-
- int rank = localView.globalBasis().gridView().comm().rank();
+ // Tape energy computation. We may not have to do this every time, but it's comparatively cheap.
+ energy(localView, localSolution);
- // Compute the actual gradient
- size_t nDofs = localSolution.size();
- size_t nDoubles = nDofs*embeddedBlocksize;
- std::vector<double> xp(nDoubles);
- int idx=0;
- for (size_t i=0; i<nDofs; i++)
- for (size_t j=0; j<embeddedBlocksize; j++)
- xp[idx++] = localSolution[i].globalCoordinates()[j];
-
- // Compute gradient
- std::vector<double> g(nDoubles);
- gradient(rank,nDoubles,xp.data(),g.data()); // gradient evaluation
-
- // Copy into Dune type
- std::vector<typename TargetSpace::EmbeddedTangentVector> localEmbeddedGradient(localSolution.size());
+ int rank = localView.globalBasis().gridView().comm().rank();
- idx=0;
- for (size_t i=0; i<nDofs; i++)
- for (size_t j=0; j<embeddedBlocksize; j++)
- localEmbeddedGradient[i][j] = g[idx++];
-
-// std::cout << "localEmbeddedGradient:\n";
-// for (size_t i=0; i<nDofs; i++)
-// std::cout << localEmbeddedGradient[i] << std::endl;
+ // Compute the actual gradient
+ size_t nDofs = localSolution.size();
+ size_t nDoubles = nDofs*embeddedBlocksize;
+ std::vector<double> xp(nDoubles);
+ int idx=0;
+ for (size_t i=0; i<nDofs; i++)
+ for (size_t j=0; j<embeddedBlocksize; j++)
+ xp[idx++] = localSolution[i].globalCoordinates()[j];
- // Express gradient in local coordinate system
- for (size_t i=0; i<nDofs; i++) {
- Dune::FieldMatrix<RT,blocksize,embeddedBlocksize> orthonormalFrame = localSolution[i].orthonormalFrame();
- orthonormalFrame.mv(localEmbeddedGradient[i],localGradient[i]);
- }
+ // Compute gradient
+ std::vector<double> g(nDoubles);
+ gradient(rank,nDoubles,xp.data(),g.data()); // gradient evaluation
+
+ // Copy into Dune type
+ std::vector<typename TargetSpace::EmbeddedTangentVector> localEmbeddedGradient(localSolution.size());
+
+ idx=0;
+ for (size_t i=0; i<nDofs; i++)
+ for (size_t j=0; j<embeddedBlocksize; j++)
+ localEmbeddedGradient[i][j] = g[idx++];
+
+ // std::cout << "localEmbeddedGradient:\n";
+ // for (size_t i=0; i<nDofs; i++)
+ // std::cout << localEmbeddedGradient[i] << std::endl;
+
+ // Express gradient in local coordinate system
+ for (size_t i=0; i<nDofs; i++) {
+ Dune::FieldMatrix<RT,blocksize,embeddedBlocksize> orthonormalFrame = localSolution[i].orthonormalFrame();
+ orthonormalFrame.mv(localEmbeddedGradient[i],localGradient[i]);
+ }
}
@@ -176,192 +176,191 @@ assembleGradient(const typename Basis::LocalView& localView,
template <class Basis, class TargetSpace>
void LocalGeodesicFEADOLCStiffness<Basis, TargetSpace>::
assembleGradientAndHessian(const typename Basis::LocalView& localView,
- const std::vector<TargetSpace>& localSolution,
- std::vector<typename TargetSpace::TangentVector>& localGradient)
+ const std::vector<TargetSpace>& localSolution,
+ std::vector<typename TargetSpace::TangentVector>& localGradient)
{
- // Tape energy computation. We may not have to do this every time, but it's comparatively cheap.
- energy(localView, localSolution);
+ // Tape energy computation. We may not have to do this every time, but it's comparatively cheap.
+ energy(localView, localSolution);
- int rank = localView.globalBasis().gridView().comm().rank();
+ int rank = localView.globalBasis().gridView().comm().rank();
- /////////////////////////////////////////////////////////////////
- // Compute the gradient. It is needed to transform the Hessian
- // into the correct coordinates.
- /////////////////////////////////////////////////////////////////
+ /////////////////////////////////////////////////////////////////
+ // Compute the gradient. It is needed to transform the Hessian
+ // into the correct coordinates.
+ /////////////////////////////////////////////////////////////////
- // Compute the actual gradient
- size_t nDofs = localSolution.size();
- size_t nDoubles = nDofs*embeddedBlocksize;
- std::vector<double> xp(nDoubles);
- int idx=0;
- for (size_t i=0; i<nDofs; i++)
- for (size_t j=0; j<embeddedBlocksize; j++)
- xp[idx++] = localSolution[i].globalCoordinates()[j];
+ // Compute the actual gradient
+ size_t nDofs = localSolution.size();
+ size_t nDoubles = nDofs*embeddedBlocksize;
+ std::vector<double> xp(nDoubles);
+ int idx=0;
+ for (size_t i=0; i<nDofs; i++)
+ for (size_t j=0; j<embeddedBlocksize; j++)
+ xp[idx++] = localSolution[i].globalCoordinates()[j];
// Compute gradient
- std::vector<double> g(nDoubles);
- gradient(rank,nDoubles,xp.data(),g.data()); // gradient evaluation
-
- // Copy into Dune type
- std::vector<typename TargetSpace::EmbeddedTangentVector> localEmbeddedGradient(localSolution.size());
+ std::vector<double> g(nDoubles);
+ gradient(rank,nDoubles,xp.data(),g.data()); // gradient evaluation
+
+ // Copy into Dune type
+ std::vector<typename TargetSpace::EmbeddedTangentVector> localEmbeddedGradient(localSolution.size());
+
+ idx=0;
+ for (size_t i=0; i<nDofs; i++)
+ for (size_t j=0; j<embeddedBlocksize; j++)
+ localEmbeddedGradient[i][j] = g[idx++];
+
+ // Express gradient in local coordinate system
+ for (size_t i=0; i<nDofs; i++) {
+ Dune::FieldMatrix<RT,blocksize,embeddedBlocksize> orthonormalFrame = localSolution[i].orthonormalFrame();
+ orthonormalFrame.mv(localEmbeddedGradient[i],localGradient[i]);
+ }
+
+ /////////////////////////////////////////////////////////////////
+ // Compute Hessian
+ /////////////////////////////////////////////////////////////////
+
+ // We compute the Hessian of the energy functional using the ADOL-C system.
+ // Since ADOL-C does not know about nonlinear spaces, what we get is actually
+ // the Hessian of a prolongation of the energy functional into the surrounding
+ // Euclidean space. To obtain the Riemannian Hessian from this we apply the
+ // formula described in Absil, Mahoney, Trumpf, "An extrinsic look at the Riemannian Hessian".
+ // This formula consists of two steps:
+ // 1) Remove all entries of the Hessian pertaining to the normal space of the
+ // manifold. In the aforementioned paper this is done by projection onto the
+ // tangent space. Since we want a matrix that is really smaller (but full rank again),
+ // we can achieve the same effect by multiplying the embedded Hessian from the left
+ // and from the right by the matrix of orthonormal frames.
+ // 2) Add a correction involving the Weingarten map.
+ //
+ // This works, and is easy to implement using the ADOL-C "hessian" driver.
+ // However, here we implement a small shortcut. Computing the embedded Hessian and
+ // multiplying one side by the orthonormal frame is the same as evaluating the Hessian
+ // (seen as an operator from R^n to R^n) in the directions of the vectors of the
+ // orthonormal frame. By luck, ADOL-C can compute the evaluations of the Hessian in
+ // a given direction directly (in fact, this is also how the "hessian" driver works).
+ // Since there are less frame vectors than the dimension of the embedding space,
+ // this reinterpretation allows to reduce the number of calls to ADOL-C.
+ // In my Cosserat shell tests this reduced assembly time by about 10%.
+
+ std::vector<Dune::FieldMatrix<RT,blocksize,embeddedBlocksize> > orthonormalFrame(nDofs);
+
+ for (size_t i=0; i<nDofs; i++)
+ orthonormalFrame[i] = localSolution[i].orthonormalFrame();
+
+ Dune::Matrix<Dune::FieldMatrix<double,blocksize, embeddedBlocksize> > embeddedHessian(nDofs,nDofs);
+
+ if (adolcScalarMode_) {
+ std::vector<double> v(nDoubles);
+ std::vector<double> w(nDoubles);
+
+ std::fill(v.begin(), v.end(), 0.0);
- idx=0;
for (size_t i=0; i<nDofs; i++)
- for (size_t j=0; j<embeddedBlocksize; j++)
- localEmbeddedGradient[i][j] = g[idx++];
-
- // Express gradient in local coordinate system
- for (size_t i=0; i<nDofs; i++) {
- Dune::FieldMatrix<RT,blocksize,embeddedBlocksize> orthonormalFrame = localSolution[i].orthonormalFrame();
- orthonormalFrame.mv(localEmbeddedGradient[i],localGradient[i]);
+ for (int ii=0; ii<blocksize; ii++)
+ {
+ // Evaluate Hessian in the direction of each vector of the orthonormal frame
+ for (size_t k=0; k<embeddedBlocksize; k++)
+ v[i*embeddedBlocksize + k] = orthonormalFrame[i][ii][k];
+
+ int rc= 3;
+ MINDEC(rc, hess_vec(rank, nDoubles, xp.data(), v.data(), w.data()));
+ if (rc < 0)
+ DUNE_THROW(Dune::Exception, "ADOL-C has returned with error code " << rc << "!");
+
+ for (size_t j=0; j<nDoubles; j++)
+ embeddedHessian[i][j/embeddedBlocksize][ii][j%embeddedBlocksize] = w[j];
+
+ // Make v the null vector again
+ std::fill(&v[i*embeddedBlocksize], &v[(i+1)*embeddedBlocksize], 0.0);
+ }
+ } else { //ADOL-C vector mode
+ int n = nDoubles;
+ int nDirections = nDofs * blocksize;
+ double* tangent[nDoubles];
+ for(size_t i=0; i<nDoubles; i++)
+ tangent[i] = (double*)malloc(nDirections*sizeof(double));
+
+ double* rawHessian[nDoubles];
+ for(size_t i=0; i<nDoubles; i++)
+ rawHessian[i] = (double*)malloc(nDirections*sizeof(double));
+
+ for (int j=0; j<nDirections; j++)
+ {
+ for (int i=0; i<n; i++)
+ tangent[i][j] = 0.0;
+
+ for (int i=0; i<embeddedBlocksize; i++)
+ tangent[(j/blocksize)*embeddedBlocksize+i][j] = orthonormalFrame[j/blocksize][j%blocksize][i];
}
+ hess_mat(rank,nDoubles,nDirections,xp.data(),tangent,rawHessian);
- /////////////////////////////////////////////////////////////////
- // Compute Hessian
- /////////////////////////////////////////////////////////////////
-
- // We compute the Hessian of the energy functional using the ADOL-C system.
- // Since ADOL-C does not know about nonlinear spaces, what we get is actually
- // the Hessian of a prolongation of the energy functional into the surrounding
- // Euclidean space. To obtain the Riemannian Hessian from this we apply the
- // formula described in Absil, Mahoney, Trumpf, "An extrinsic look at the Riemannian Hessian".
- // This formula consists of two steps:
- // 1) Remove all entries of the Hessian pertaining to the normal space of the
- // manifold. In the aforementioned paper this is done by projection onto the
- // tangent space. Since we want a matrix that is really smaller (but full rank again),
- // we can achieve the same effect by multiplying the embedded Hessian from the left
- // and from the right by the matrix of orthonormal frames.
- // 2) Add a correction involving the Weingarten map.
- //
- // This works, and is easy to implement using the ADOL-C "hessian" driver.
- // However, here we implement a small shortcut. Computing the embedded Hessian and
- // multiplying one side by the orthonormal frame is the same as evaluating the Hessian
- // (seen as an operator from R^n to R^n) in the directions of the vectors of the
- // orthonormal frame. By luck, ADOL-C can compute the evaluations of the Hessian in
- // a given direction directly (in fact, this is also how the "hessian" driver works).
- // Since there are less frame vectors than the dimension of the embedding space,
- // this reinterpretation allows to reduce the number of calls to ADOL-C.
- // In my Cosserat shell tests this reduced assembly time by about 10%.
-
- std::vector<Dune::FieldMatrix<RT,blocksize,embeddedBlocksize> > orthonormalFrame(nDofs);
+ // Copy Hessian into Dune data type
+ for(size_t i=0; i<nDoubles; i++)
+ for (int j=0; j<nDirections; j++)
+ embeddedHessian[j/blocksize][i/embeddedBlocksize][j%blocksize][i%embeddedBlocksize] = rawHessian[i][j];
- for (size_t i=0; i<nDofs; i++)
- orthonormalFrame[i] = localSolution[i].orthonormalFrame();
-
- Dune::Matrix<Dune::FieldMatrix<double,blocksize, embeddedBlocksize> > embeddedHessian(nDofs,nDofs);
-
- if (adolcScalarMode_) {
- std::vector<double> v(nDoubles);
- std::vector<double> w(nDoubles);
-
- std::fill(v.begin(), v.end(), 0.0);
-
- for (size_t i=0; i<nDofs; i++)
- for (int ii=0; ii<blocksize; ii++)
- {
- // Evaluate Hessian in the direction of each vector of the orthonormal frame
- for (size_t k=0; k<embeddedBlocksize; k++)
- v[i*embeddedBlocksize + k] = orthonormalFrame[i][ii][k];
-
- int rc= 3;
- MINDEC(rc, hess_vec(rank, nDoubles, xp.data(), v.data(), w.data()));
- if (rc < 0)
- DUNE_THROW(Dune::Exception, "ADOL-C has returned with error code " << rc << "!");
-
- for (size_t j=0; j<nDoubles; j++)
- embeddedHessian[i][j/embeddedBlocksize][ii][j%embeddedBlocksize] = w[j];
-
- // Make v the null vector again
- std::fill(&v[i*embeddedBlocksize], &v[(i+1)*embeddedBlocksize], 0.0);
- }
- } else { //ADOL-C vector mode
- int n = nDoubles;
- int nDirections = nDofs * blocksize;
- double* tangent[nDoubles];
- for(size_t i=0; i<nDoubles; i++)
- tangent[i] = (double*)malloc(nDirections*sizeof(double));
-
- double* rawHessian[nDoubles];
- for(size_t i=0; i<nDoubles; i++)
- rawHessian[i] = (double*)malloc(nDirections*sizeof(double));
-
- for (int j=0; j<nDirections; j++)
- {
- for (int i=0; i<n; i++)
- tangent[i][j] = 0.0;
-
- for (int i=0; i<embeddedBlocksize; i++)
- tangent[(j/blocksize)*embeddedBlocksize+i][j] = orthonormalFrame[j/blocksize][j%blocksize][i];
- }
- hess_mat(rank,nDoubles,nDirections,xp.data(),tangent,rawHessian);
-
- // Copy Hessian into Dune data type
- for(size_t i=0; i<nDoubles; i++)
- for (int j=0; j<nDirections; j++)
- embeddedHessian[j/blocksize][i/embeddedBlocksize][j%blocksize][i%embeddedBlocksize] = rawHessian[i][j];
-
- for(size_t i=0; i<nDoubles; i++) {
- free(rawHessian[i]);
- free(tangent[i]);
- }
+ for(size_t i=0; i<nDoubles; i++) {
+ free(rawHessian[i]);
+ free(tangent[i]);
}
- // From this, compute the Hessian with respect to the manifold (which we assume here is embedded
- // isometrically in a Euclidean space.
- // For the detailed explanation of the following see: Absil, Mahoney, Trumpf, "An extrinsic look
- // at the Riemannian Hessian".
+ }
+ // From this, compute the Hessian with respect to the manifold (which we assume here is embedded
+ // isometrically in a Euclidean space.
+ // For the detailed explanation of the following see: Absil, Mahoney, Trumpf, "An extrinsic look
+ // at the Riemannian Hessian".
- typedef typename TargetSpace::EmbeddedTangentVector EmbeddedTangentVector;
- typedef typename TargetSpace::TangentVector TangentVector;
+ typedef typename TargetSpace::EmbeddedTangentVector EmbeddedTangentVector;
+ typedef typename TargetSpace::TangentVector TangentVector;
- this->A_.setSize(nDofs,nDofs);
+ this->A_.setSize(nDofs,nDofs);
- for (size_t col=0; col<nDofs; col++) {
+ for (size_t col=0; col<nDofs; col++) {
- for (size_t subCol=0; subCol<blocksize; subCol++) {
+ for (size_t subCol=0; subCol<blocksize; subCol++) {
- EmbeddedTangentVector z = orthonormalFrame[col][subCol];
+ EmbeddedTangentVector z = orthonormalFrame[col][subCol];
- // P_x \partial^2 f z
- for (size_t row=0; row<nDofs; row++) {
- TangentVector semiEmbeddedProduct;
- embeddedHessian[row][col].mv(z,semiEmbeddedProduct);
+ // P_x \partial^2 f z
+ for (size_t row=0; row<nDofs; row++) {
+ TangentVector semiEmbeddedProduct;
+ embeddedHessian[row][col].mv(z,semiEmbeddedProduct);
- for (int subRow=0; subRow<blocksize; subRow++)
- this->A_[row][col][subRow][subCol] = semiEmbeddedProduct[subRow];
- }
-
- }
+ for (int subRow=0; subRow<blocksize; subRow++)
+ this->A_[row][col][subRow][subCol] = semiEmbeddedProduct[subRow];
+ }
}
- //////////////////////////////////////////////////////////////////////////////////////
- // Further correction due to non-planar configuration space
- // + \mathfrak{A}_x(z,P^\orth_x \partial f)
- //////////////////////////////////////////////////////////////////////////////////////
+ }
- // Project embedded gradient onto normal space
- std::vector<typename TargetSpace::EmbeddedTangentVector> projectedGradient(localSolution.size());
- for (size_t i=0; i<localSolution.size(); i++)
- projectedGradient[i] = localSolution[i].projectOntoNormalSpace(localEmbeddedGradient[i]);
+ //////////////////////////////////////////////////////////////////////////////////////
+ // Further correction due to non-planar configuration space
+ // + \mathfrak{A}_x(z,P^\orth_x \partial f)
+ //////////////////////////////////////////////////////////////////////////////////////
- for (size_t row=0; row<nDofs; row++) {
+ // Project embedded gradient onto normal space
+ std::vector<typename TargetSpace::EmbeddedTangentVector> projectedGradient(localSolution.size());
+ for (size_t i=0; i<localSolution.size(); i++)
+ projectedGradient[i] = localSolution[i].projectOntoNormalSpace(localEmbeddedGradient[i]);
- for (size_t subRow=0; subRow<blocksize; subRow++) {
+ for (size_t row=0; row<nDofs; row++) {
- EmbeddedTangentVector z = orthonormalFrame[row][subRow];
- EmbeddedTangentVector tmp1 = localSolution[row].weingarten(z,projectedGradient[row]);
+ for (size_t subRow=0; subRow<blocksize; subRow++) {
- TangentVector tmp2;
- orthonormalFrame[row].mv(tmp1,tmp2);
+ EmbeddedTangentVector z = orthonormalFrame[row][subRow];
+ EmbeddedTangentVector tmp1 = localSolution[row].weingarten(z,projectedGradient[row]);
- this->A_[row][row][subRow] += tmp2;
- }
+ TangentVector tmp2;
+ orthonormalFrame[row].mv(tmp1,tmp2);
+ this->A_[row][row][subRow] += tmp2;
}
-// std::cout << "ADOL-C stiffness:\n";
-// printmatrix(std::cout, this->A_, "foo", "--");
+ }
+
+ // std::cout << "ADOL-C stiffness:\n";
+ // printmatrix(std::cout, this->A_, "foo", "--");
}
#endif
-
diff --git a/dune/gfe/assemblers/localgeodesicfefdstiffness.hh b/dune/gfe/assemblers/localgeodesicfefdstiffness.hh
index 5eaa6094..6ad5ad3e 100644
--- a/dune/gfe/assemblers/localgeodesicfefdstiffness.hh
+++ b/dune/gfe/assemblers/localgeodesicfefdstiffness.hh
@@ -10,63 +10,63 @@
*/
template<class Basis, class TargetSpace, class field_type=double>
class LocalGeodesicFEFDStiffness
- : public LocalGeodesicFEStiffness<Basis,TargetSpace>
+ : public LocalGeodesicFEStiffness<Basis,TargetSpace>
{
- // grid types
- typedef typename Basis::GridView GridView;
- typedef typename GridView::ctype DT;
- typedef typename TargetSpace::ctype RT;
- typedef typename GridView::template Codim<0>::Entity Entity;
+ // grid types
+ typedef typename Basis::GridView GridView;
+ typedef typename GridView::ctype DT;
+ typedef typename TargetSpace::ctype RT;
+ typedef typename GridView::template Codim<0>::Entity Entity;
- typedef typename TargetSpace::template rebind<field_type>::other ATargetSpace;
+ typedef typename TargetSpace::template rebind<field_type>::other ATargetSpace;
- // some other sizes
- constexpr static int gridDim = GridView::dimension;
+ // some other sizes
+ constexpr static int gridDim = GridView::dimension;
public:
- //! Dimension of a tangent space
- constexpr static int blocksize = TargetSpace::TangentVector::dimension;
+ //! Dimension of a tangent space
+ constexpr static int blocksize = TargetSpace::TangentVector::dimension;
- //! Dimension of the embedding space
- constexpr static int embeddedBlocksize = TargetSpace::EmbeddedTangentVector::dimension;
+ //! Dimension of the embedding space
+ constexpr static int embeddedBlocksize = TargetSpace::EmbeddedTangentVector::dimension;
- LocalGeodesicFEFDStiffness(const Dune::GFE::LocalEnergy<Basis, ATargetSpace>* energy)
+ LocalGeodesicFEFDStiffness(const Dune::GFE::LocalEnergy<Basis, ATargetSpace>* energy)
: localEnergy_(energy)
- {}
+ {}
- /** \brief Compute the energy at the current configuration */
- virtual RT energy (const typename Basis::LocalView& localView,
- const std::vector<TargetSpace>& localSolution) const override
- {
- return localEnergy_->energy(localView,localSolution);
- }
+ /** \brief Compute the energy at the current configuration */
+ virtual RT energy (const typename Basis::LocalView& localView,
+ const std::vector<TargetSpace>& localSolution) const override
+ {
+ return localEnergy_->energy(localView,localSolution);
+ }
- /** \brief Assemble the element gradient of the energy functional
+ /** \brief Assemble the element gradient of the energy functional
- The default implementation in this class uses a finite difference approximation */
- virtual void assembleGradient(const typename Basis::LocalView& localView,
- const std::vector<TargetSpace>& solution,
- std::vector<typename TargetSpace::TangentVector>& gradient) const override;
+ The default implementation in this class uses a finite difference approximation */
+ virtual void assembleGradient(const typename Basis::LocalView& localView,
+ const std::vector<TargetSpace>& solution,
+ std::vector<typename TargetSpace::TangentVector>& gradient) const override;
- /** \brief Assemble the local tangent matrix and gradient at the current position
+ /** \brief Assemble the local tangent matrix and gradient at the current position
- This implementation uses finite-difference approximations
+ This implementation uses finite-difference approximations
- The formula for the Riemannian Hessian has been taken from Absil, Mahony, Sepulchre:
- 'Optimization algorithms on matrix manifolds', page 107. There it says that
- \f[
- \langle Hess f(x)[\xi], \eta \rangle
- = \frac 12 \frac{d^2}{dt^2} \Big(f(\exp_x(t(\xi + \eta))) - f(\exp_x(t\xi)) - f(\exp_x(t\eta))\Big)\Big|_{t=0}.
- \f]
- We compute that using a finite difference approximation.
- */
- virtual void assembleGradientAndHessian(const typename Basis::LocalView& localView,
- const std::vector<TargetSpace>& localSolution,
- std::vector<typename TargetSpace::TangentVector>& localGradient) override;
+ The formula for the Riemannian Hessian has been taken from Absil, Mahony, Sepulchre:
+ 'Optimization algorithms on matrix manifolds', page 107. There it says that
+ \f[
+ \langle Hess f(x)[\xi], \eta \rangle
+ = \frac 12 \frac{d^2}{dt^2} \Big(f(\exp_x(t(\xi + \eta))) - f(\exp_x(t\xi)) - f(\exp_x(t\eta))\Big)\Big|_{t=0}.
+ \f]
+ We compute that using a finite difference approximation.
+ */
+ virtual void assembleGradientAndHessian(const typename Basis::LocalView& localView,
+ const std::vector<TargetSpace>& localSolution,
+ std::vector<typename TargetSpace::TangentVector>& localGradient) override;
- const Dune::GFE::LocalEnergy<Basis, ATargetSpace>* localEnergy_;
+ const Dune::GFE::LocalEnergy<Basis, ATargetSpace>* localEnergy_;
};
@@ -77,55 +77,55 @@ assembleGradient(const typename Basis::LocalView& localView,
std::vector<typename TargetSpace::TangentVector>& localGradient) const
{
- // ///////////////////////////////////////////////////////////
- // Compute gradient by finite-difference approximation
- // ///////////////////////////////////////////////////////////
+ // ///////////////////////////////////////////////////////////
+ // Compute gradient by finite-difference approximation
+ // ///////////////////////////////////////////////////////////
- field_type eps = 1e-6;
+ field_type eps = 1e-6;
- std::vector<ATargetSpace> localASolution(localSolution.size());
- std::vector<typename ATargetSpace::CoordinateType> aRaw(localSolution.size());
- for (size_t i=0; i<localSolution.size(); i++) {
- typename TargetSpace::CoordinateType raw = localSolution[i].globalCoordinates();
- for (size_t j=0; j<raw.size(); j++)
- aRaw[i][j] = raw[j];
- localASolution[i] = aRaw[i]; // may contain a projection onto M -- needs to be done in adouble
- }
+ std::vector<ATargetSpace> localASolution(localSolution.size());
+ std::vector<typename ATargetSpace::CoordinateType> aRaw(localSolution.size());
+ for (size_t i=0; i<localSolution.size(); i++) {
+ typename TargetSpace::CoordinateType raw = localSolution[i].globalCoordinates();
+ for (size_t j=0; j<raw.size(); j++)
+ aRaw[i][j] = raw[j];
+ localASolution[i] = aRaw[i]; // may contain a projection onto M -- needs to be done in adouble
+ }
- localGradient.resize(localSolution.size());
+ localGradient.resize(localSolution.size());
- std::vector<ATargetSpace> forwardSolution = localASolution;
- std::vector<ATargetSpace> backwardSolution = localASolution;
+ std::vector<ATargetSpace> forwardSolution = localASolution;
+ std::vector<ATargetSpace> backwardSolution = localASolution;
- for (size_t i=0; i<localSolution.size(); i++) {
+ for (size_t i=0; i<localSolution.size(); i++) {
- // basis vectors of the tangent space of the i-th entry of localSolution
- const Dune::FieldMatrix<field_type,blocksize,embeddedBlocksize> B = localSolution[i].orthonormalFrame();
+ // basis vectors of the tangent space of the i-th entry of localSolution
+ const Dune::FieldMatrix<field_type,blocksize,embeddedBlocksize> B = localSolution[i].orthonormalFrame();
- for (int j=0; j<blocksize; j++) {
+ for (int j=0; j<blocksize; j++) {
- typename ATargetSpace::EmbeddedTangentVector forwardCorrection = B[j];
- forwardCorrection *= eps;
+ typename ATargetSpace::EmbeddedTangentVector forwardCorrection = B[j];
+ forwardCorrection *= eps;
- typename ATargetSpace::EmbeddedTangentVector backwardCorrection = B[j];
- backwardCorrection *= -eps;
+ typename ATargetSpace::EmbeddedTangentVector backwardCorrection = B[j];
+ backwardCorrection *= -eps;
- forwardSolution[i] = ATargetSpace::exp(localASolution[i], forwardCorrection);
- backwardSolution[i] = ATargetSpace::exp(localASolution[i], backwardCorrection);
+ forwardSolution[i] = ATargetSpace::exp(localASolution[i], forwardCorrection);
+ backwardSolution[i] = ATargetSpace::exp(localASolution[i], backwardCorrection);
- field_type foo = (localEnergy_->energy(localView,forwardSolution) - localEnergy_->energy(localView, backwardSolution)) / (2*eps);
+ field_type foo = (localEnergy_->energy(localView,forwardSolution) - localEnergy_->energy(localView, backwardSolution)) / (2*eps);
#ifdef MULTIPRECISION
- localGradient[i][j] = foo.template convert_to<double>();
+ localGradient[i][j] = foo.template convert_to<double>();
#else
- localGradient[i][j] = foo;
+ localGradient[i][j] = foo;
#endif
- }
+ }
- forwardSolution[i] = localASolution[i];
- backwardSolution[i] = localASolution[i];
+ forwardSolution[i] = localASolution[i];
+ backwardSolution[i] = localASolution[i];
- }
+ }
}
@@ -138,130 +138,129 @@ assembleGradient(const typename Basis::LocalView& localView,
template <class Basis, class TargetSpace, class field_type>
void LocalGeodesicFEFDStiffness<Basis, TargetSpace, field_type>::
assembleGradientAndHessian(const typename Basis::LocalView& localView,
- const std::vector<TargetSpace>& localSolution,
- std::vector<typename TargetSpace::TangentVector>& localGradient)
+ const std::vector<TargetSpace>& localSolution,
+ std::vector<typename TargetSpace::TangentVector>& localGradient)
{
- // Number of degrees of freedom for this element
- size_t nDofs = localSolution.size();
+ // Number of degrees of freedom for this element
+ size_t nDofs = localSolution.size();
- // Clear assemble data
- this->A_.setSize(nDofs, nDofs);
+ // Clear assemble data
+ this->A_.setSize(nDofs, nDofs);
- this->A_ = 0;
+ this->A_ = 0;
#ifdef MULTIPRECISION
- const field_type eps = 1e-10;
+ const field_type eps = 1e-10;
#else
- const field_type eps = 1e-4;
+ const field_type eps = 1e-4;
#endif
- std::vector<ATargetSpace> localASolution(localSolution.size());
- std::vector<typename ATargetSpace::CoordinateType> aRaw(localSolution.size());
- for (size_t i=0; i<localSolution.size(); i++) {
- typename TargetSpace::CoordinateType raw = localSolution[i].globalCoordinates();
- for (size_t j=0; j<raw.size(); j++)
- aRaw[i][j] = raw[j];
- localASolution[i] = aRaw[i];
- }
-
- std::vector<Dune::FieldMatrix<double,blocksize,embeddedBlocksize> > B(localSolution.size());
- for (size_t i=0; i<B.size(); i++)
- B[i] = localSolution[i].orthonormalFrame();
+ std::vector<ATargetSpace> localASolution(localSolution.size());
+ std::vector<typename ATargetSpace::CoordinateType> aRaw(localSolution.size());
+ for (size_t i=0; i<localSolution.size(); i++) {
+ typename TargetSpace::CoordinateType raw = localSolution[i].globalCoordinates();
+ for (size_t j=0; j<raw.size(); j++)
+ aRaw[i][j] = raw[j];
+ localASolution[i] = aRaw[i];
+ }
- // Precompute negative energy at the current configuration
- // (negative because that is how we need it as part of the 2nd-order fd formula)
- field_type centerValue = -localEnergy_->energy(localView, localASolution);
+ std::vector<Dune::FieldMatrix<double,blocksize,embeddedBlocksize> > B(localSolution.size());
+ for (size_t i=0; i<B.size(); i++)
+ B[i] = localSolution[i].orthonormalFrame();
- // Precompute energy infinitesimal corrections in the directions of the local basis vectors
- std::vector<std::array<field_type,blocksize> > forwardEnergy(nDofs);
- std::vector<std::array<field_type,blocksize> > backwardEnergy(nDofs);
+ // Precompute negative energy at the current configuration
+ // (negative because that is how we need it as part of the 2nd-order fd formula)
+ field_type centerValue = -localEnergy_->energy(localView, localASolution);
- //#pragma omp parallel for schedule (dynamic)
- for (size_t i=0; i<localSolution.size(); i++) {
- for (size_t i2=0; i2<blocksize; i2++) {
- typename ATargetSpace::EmbeddedTangentVector epsXi = B[i][i2];
- epsXi *= eps;
- typename ATargetSpace::EmbeddedTangentVector minusEpsXi = epsXi;
- minusEpsXi *= -1;
+ // Precompute energy infinitesimal corrections in the directions of the local basis vectors
+ std::vector<std::array<field_type,blocksize> > forwardEnergy(nDofs);
+ std::vector<std::array<field_type,blocksize> > backwardEnergy(nDofs);
- std::vector<ATargetSpace> forwardSolution = localASolution;
- std::vector<ATargetSpace> backwardSolution = localASolution;
+ //#pragma omp parallel for schedule (dynamic)
+ for (size_t i=0; i<localSolution.size(); i++) {
+ for (size_t i2=0; i2<blocksize; i2++) {
+ typename ATargetSpace::EmbeddedTangentVector epsXi = B[i][i2];
+ epsXi *= eps;
+ typename ATargetSpace::EmbeddedTangentVector minusEpsXi = epsXi;
+ minusEpsXi *= -1;
- forwardSolution[i] = ATargetSpace::exp(localASolution[i],epsXi);
- backwardSolution[i] = ATargetSpace::exp(localASolution[i],minusEpsXi);
+ std::vector<ATargetSpace> forwardSolution = localASolution;
+ std::vector<ATargetSpace> backwardSolution = localASolution;
- forwardEnergy[i][i2] = localEnergy_->energy(localView, forwardSolution);
- backwardEnergy[i][i2] = localEnergy_->energy(localView, backwardSolution);
+ forwardSolution[i] = ATargetSpace::exp(localASolution[i],epsXi);
+ backwardSolution[i] = ATargetSpace::exp(localASolution[i],minusEpsXi);
- }
+ forwardEnergy[i][i2] = localEnergy_->energy(localView, forwardSolution);
+ backwardEnergy[i][i2] = localEnergy_->energy(localView, backwardSolution);
}
- //////////////////////////////////////////////////////////////
- // Compute gradient by finite-difference approximation
- //////////////////////////////////////////////////////////////
+ }
- localGradient.resize(localSolution.size());
+ //////////////////////////////////////////////////////////////
+ // Compute gradient by finite-difference approximation
+ //////////////////////////////////////////////////////////////
- for (size_t i=0; i<localSolution.size(); i++)
- for (int j=0; j<blocksize; j++)
- {
- field_type foo = (forwardEnergy[i][j] - backwardEnergy[i][j]) / (2*eps);
+ localGradient.resize(localSolution.size());
+
+ for (size_t i=0; i<localSolution.size(); i++)
+ for (int j=0; j<blocksize; j++)
+ {
+ field_type foo = (forwardEnergy[i][j] - backwardEnergy[i][j]) / (2*eps);
#ifdef MULTIPRECISION
- localGradient[i][j] = foo.template convert_to<double>();
+ localGradient[i][j] = foo.template convert_to<double>();
#else
- localGradient[i][j] = foo;
+ localGradient[i][j] = foo;
#endif
- }
+ }
- ///////////////////////////////////////////////////////////////////////////
- // Compute Riemannian Hesse matrix by finite-difference approximation.
- // We loop over the lower left triangular half of the matrix.
- // The other half follows from symmetry.
- ///////////////////////////////////////////////////////////////////////////
- //#pragma omp parallel for schedule (dynamic)
- for (size_t i=0; i<localSolution.size(); i++) {
- for (size_t i2=0; i2<blocksize; i2++) {
- for (size_t j=0; j<=i; j++) {
- for (size_t j2=0; j2<((i==j) ? i2+1 : blocksize); j2++) {
-
- std::vector<ATargetSpace> forwardSolutionXiEta = localASolution;
- std::vector<ATargetSpace> backwardSolutionXiEta = localASolution;
-
- typename ATargetSpace::EmbeddedTangentVector epsXi = B[i][i2]; epsXi *= eps;
- typename ATargetSpace::EmbeddedTangentVector epsEta = B[j][j2]; epsEta *= eps;
-
- typename ATargetSpace::EmbeddedTangentVector minusEpsXi = epsXi; minusEpsXi *= -1;
- typename ATargetSpace::EmbeddedTangentVector minusEpsEta = epsEta; minusEpsEta *= -1;
-
- if (i==j)
- forwardSolutionXiEta[i] = ATargetSpace::exp(localASolution[i],epsXi+epsEta);
- else {
- forwardSolutionXiEta[i] = ATargetSpace::exp(localASolution[i],epsXi);
- forwardSolutionXiEta[j] = ATargetSpace::exp(localASolution[j],epsEta);
- }
-
- if (i==j)
- backwardSolutionXiEta[i] = ATargetSpace::exp(localASolution[i],minusEpsXi+minusEpsEta);
- else {
- backwardSolutionXiEta[i] = ATargetSpace::exp(localASolution[i],minusEpsXi);
- backwardSolutionXiEta[j] = ATargetSpace::exp(localASolution[j],minusEpsEta);
- }
-
- field_type forwardValue = localEnergy_->energy(localView, forwardSolutionXiEta) - forwardEnergy[i][i2] - forwardEnergy[j][j2];
- field_type backwardValue = localEnergy_->energy(localView, backwardSolutionXiEta) - backwardEnergy[i][i2] - backwardEnergy[j][j2];
-
- field_type foo = 0.5 * (forwardValue - 2*centerValue + backwardValue) / (eps*eps);
+ ///////////////////////////////////////////////////////////////////////////
+ // Compute Riemannian Hesse matrix by finite-difference approximation.
+ // We loop over the lower left triangular half of the matrix.
+ // The other half follows from symmetry.
+ ///////////////////////////////////////////////////////////////////////////
+ //#pragma omp parallel for schedule (dynamic)
+ for (size_t i=0; i<localSolution.size(); i++) {
+ for (size_t i2=0; i2<blocksize; i2++) {
+ for (size_t j=0; j<=i; j++) {
+ for (size_t j2=0; j2<((i==j) ? i2+1 : blocksize); j2++) {
+
+ std::vector<ATargetSpace> forwardSolutionXiEta = localASolution;
+ std::vector<ATargetSpace> backwardSolutionXiEta = localASolution;
+
+ typename ATargetSpace::EmbeddedTangentVector epsXi = B[i][i2]; epsXi *= eps;
+ typename ATargetSpace::EmbeddedTangentVector epsEta = B[j][j2]; epsEta *= eps;
+
+ typename ATargetSpace::EmbeddedTangentVector minusEpsXi = epsXi; minusEpsXi *= -1;
+ typename ATargetSpace::EmbeddedTangentVector minusEpsEta = epsEta; minusEpsEta *= -1;
+
+ if (i==j)
+ forwardSolutionXiEta[i] = ATargetSpace::exp(localASolution[i],epsXi+epsEta);
+ else {
+ forwardSolutionXiEta[i] = ATargetSpace::exp(localASolution[i],epsXi);
+ forwardSolutionXiEta[j] = ATargetSpace::exp(localASolution[j],epsEta);
+ }
+
+ if (i==j)
+ backwardSolutionXiEta[i] = ATargetSpace::exp(localASolution[i],minusEpsXi+minusEpsEta);
+ else {
+ backwardSolutionXiEta[i] = ATargetSpace::exp(localASolution[i],minusEpsXi);
+ backwardSolutionXiEta[j] = ATargetSpace::exp(localASolution[j],minusEpsEta);
+ }
+
+ field_type forwardValue = localEnergy_->energy(localView, forwardSolutionXiEta) - forwardEnergy[i][i2] - forwardEnergy[j][j2];
+ field_type backwardValue = localEnergy_->energy(localView, backwardSolutionXiEta) - backwardEnergy[i][i2] - backwardEnergy[j][j2];
+
+ field_type foo = 0.5 * (forwardValue - 2*centerValue + backwardValue) / (eps*eps);
#ifdef MULTIPRECISION
- this->A_[i][j][i2][j2] = this->A_[j][i][j2][i2] = foo.template convert_to<double>();
+ this->A_[i][j][i2][j2] = this->A_[j][i][j2][i2] = foo.template convert_to<double>();
#else
- this->A_[i][j][i2][j2] = this->A_[j][i][j2][i2] = foo;
+ this->A_[i][j][i2][j2] = this->A_[j][i][j2][i2] = foo;
#endif
- }
- }
}
+ }
}
+ }
}
#endif
-
diff --git a/dune/gfe/assemblers/localgeodesicfestiffness.hh b/dune/gfe/assemblers/localgeodesicfestiffness.hh
index a916fbdb..9dd98819 100644
--- a/dune/gfe/assemblers/localgeodesicfestiffness.hh
+++ b/dune/gfe/assemblers/localgeodesicfestiffness.hh
@@ -8,47 +8,46 @@
template<class Basis, class TargetSpace>
class LocalGeodesicFEStiffness
-: public Dune::GFE::LocalFirstOrderModel<Basis,TargetSpace>
+ : public Dune::GFE::LocalFirstOrderModel<Basis,TargetSpace>
{
- // grid types
- typedef typename Basis::GridView GridView;
- typedef typename GridView::ctype DT;
- typedef typename TargetSpace::ctype RT;
- typedef typename GridView::template Codim<0>::Entity Entity;
+ // grid types
+ typedef typename Basis::GridView GridView;
+ typedef typename GridView::ctype DT;
+ typedef typename TargetSpace::ctype RT;
+ typedef typename GridView::template Codim<0>::Entity Entity;
- // some other sizes
- constexpr static int gridDim = GridView::dimension;
+ // some other sizes
+ constexpr static int gridDim = GridView::dimension;
public:
- //! Dimension of a tangent space
- constexpr static int blocksize = TargetSpace::TangentVector::dimension;
+ //! Dimension of a tangent space
+ constexpr static int blocksize = TargetSpace::TangentVector::dimension;
- //! Dimension of the embedding space
- constexpr static int embeddedBlocksize = TargetSpace::EmbeddedTangentVector::dimension;
+ //! Dimension of the embedding space
+ constexpr static int embeddedBlocksize = TargetSpace::EmbeddedTangentVector::dimension;
- /** \brief Assemble the local gradient and stiffness matrix at the current position
+ /** \brief Assemble the local gradient and stiffness matrix at the current position
- */
- virtual void assembleGradientAndHessian(const typename Basis::LocalView& localView,
- const std::vector<TargetSpace>& localSolution,
- std::vector<typename TargetSpace::TangentVector>& localGradient) = 0;
+ */
+ virtual void assembleGradientAndHessian(const typename Basis::LocalView& localView,
+ const std::vector<TargetSpace>& localSolution,
+ std::vector<typename TargetSpace::TangentVector>& localGradient) = 0;
- /** \brief Compute the energy at the current configuration */
- virtual RT energy (const typename Basis::LocalView& localView,
- const std::vector<TargetSpace>& localSolution) const = 0;
+ /** \brief Compute the energy at the current configuration */
+ virtual RT energy (const typename Basis::LocalView& localView,
+ const std::vector<TargetSpace>& localSolution) const = 0;
- /** \brief Assemble the element gradient of the energy functional
+ /** \brief Assemble the element gradient of the energy functional
- The default implementation in this class uses a finite difference approximation */
- virtual void assembleGradient(const typename Basis::LocalView& localView,
- const std::vector<TargetSpace>& solution,
- std::vector<typename TargetSpace::TangentVector>& gradient) const = 0;
+ The default implementation in this class uses a finite difference approximation */
+ virtual void assembleGradient(const typename Basis::LocalView& localView,
+ const std::vector<TargetSpace>& solution,
+ std::vector<typename TargetSpace::TangentVector>& gradient) const = 0;
- // assembled data
- Dune::Matrix<Dune::FieldMatrix<RT,blocksize,blocksize> > A_;
+ // assembled data
+ Dune::Matrix<Dune::FieldMatrix<RT,blocksize,blocksize> > A_;
};
#endif
-
diff --git a/dune/gfe/assemblers/localintegralenergy.hh b/dune/gfe/assemblers/localintegralenergy.hh
index 420dd196..40fb241b 100644
--- a/dune/gfe/assemblers/localintegralenergy.hh
+++ b/dune/gfe/assemblers/localintegralenergy.hh
@@ -22,79 +22,79 @@
namespace Dune::GFE {
/**
- \brief Assembles the elastic energy for a single element integrating the localdensity over one element.
+ \brief Assembles the elastic energy for a single element integrating the localdensity over one element.
This class works similarly to the class Dune::Elasticity::LocalIntegralEnergy, where Dune::Elasticity::LocalIntegralEnergy extends
Dune::Elasticity::LocalEnergy and Dune::GFE::LocalIntegralEnergy extends Dune::GFE::LocalEnergy.
- */
-template<class Basis, class... TargetSpaces>
-class LocalIntegralEnergy
- : public Dune::GFE::LocalEnergy<Basis,TargetSpaces...>
-{
- using LocalView = typename Basis::LocalView;
- using GridView = typename LocalView::GridView;
- using DT = typename GridView::Grid::ctype;
- using RT = typename GFE::LocalEnergy<Basis,TargetSpaces...>::RT;
-
- constexpr static int gridDim = GridView::dimension;
-
-public:
-
- /** \brief Constructor with a Dune::Elasticity::LocalDensity
- */
- LocalIntegralEnergy(const std::shared_ptr<Elasticity::LocalDensity<gridDim,RT,DT>>& ld)
- : localDensityElasticity_(ld)
- {}
-
- /** \brief Constructor with a Dune::GFE::LocalDensity
- */
- LocalIntegralEnergy(const std::shared_ptr<GFE::LocalDensity<gridDim,RT,DT>>& ld)
- : localDensityGFE_(ld)
- {}
-
-private:
+ */
+ template<class Basis, class ... TargetSpaces>
+ class LocalIntegralEnergy
+ : public Dune::GFE::LocalEnergy<Basis,TargetSpaces...>
+ {
+ using LocalView = typename Basis::LocalView;
+ using GridView = typename LocalView::GridView;
+ using DT = typename GridView::Grid::ctype;
+ using RT = typename GFE::LocalEnergy<Basis,TargetSpaces...>::RT;
+
+ constexpr static int gridDim = GridView::dimension;
+
+ public:
+
+ /** \brief Constructor with a Dune::Elasticity::LocalDensity
+ */
+ LocalIntegralEnergy(const std::shared_ptr<Elasticity::LocalDensity<gridDim,RT,DT> >& ld)
+ : localDensityElasticity_(ld)
+ {}
+
+ /** \brief Constructor with a Dune::GFE::LocalDensity
+ */
+ LocalIntegralEnergy(const std::shared_ptr<GFE::LocalDensity<gridDim,RT,DT> >& ld)
+ : localDensityGFE_(ld)
+ {}
+
+ private:
/** \brief Assemble the energy for a single element */
- RT energy(const typename Basis::LocalView& localView,
- const std::vector<TargetSpaces>&... localSolutions) const
- {
- const auto& element = localView.element();
+ RT energy(const typename Basis::LocalView& localView,
+ const std::vector<TargetSpaces>& ... localSolutions) const
+ {
+ const auto& element = localView.element();
+
+ static_assert(sizeof...(TargetSpaces) > 1, "LocalGeodesicIntegralEnergy needs at least two TargetSpace!");
- static_assert(sizeof...(TargetSpaces) > 1, "LocalGeodesicIntegralEnergy needs at least two TargetSpace!");
+ using TargetSpaceDeformation = typename std::tuple_element<0, std::tuple<TargetSpaces...> >::type;
+ using TargetSpaceRotation = typename std::tuple_element<1, std::tuple<TargetSpaces...> >::type;
- using TargetSpaceDeformation = typename std::tuple_element<0, std::tuple<TargetSpaces...> >::type;
- using TargetSpaceRotation = typename std::tuple_element<1, std::tuple<TargetSpaces...> >::type;
+ static_assert( (std::is_same<TargetSpaceDeformation, RigidBodyMotion<RT,gridDim> >::value)
+ or (std::is_same<TargetSpaceDeformation, RealTuple<RT,gridDim> >::value), "The first TargetSpace of LocalGeodesicIntegralEnergy needs to be RigidBodyMotion or RealTuple!" );
- static_assert( (std::is_same<TargetSpaceDeformation, RigidBodyMotion<RT,gridDim>>::value)
- or (std::is_same<TargetSpaceDeformation, RealTuple<RT,gridDim>>::value), "The first TargetSpace of LocalGeodesicIntegralEnergy needs to be RigidBodyMotion or RealTuple!" );
-
- const std::vector<TargetSpaceDeformation>& localDeformationConfiguration = std::get<0>(std::forward_as_tuple(localSolutions...));
- const std::vector<TargetSpaceRotation>& localOrientationConfiguration = std::get<1>(std::forward_as_tuple(localSolutions...));
+ const std::vector<TargetSpaceDeformation>& localDeformationConfiguration = std::get<0>(std::forward_as_tuple(localSolutions ...));
+ const std::vector<TargetSpaceRotation>& localOrientationConfiguration = std::get<1>(std::forward_as_tuple(localSolutions ...));
- using namespace Indices;
- // composite Basis: grab the finite element of the first child
- const auto& deformationLocalFiniteElement = localView.tree().child(_0,0).finiteElement();
- const auto& orientationLocalFiniteElement = localView.tree().child(_1,0).finiteElement();
+ using namespace Indices;
+ // composite Basis: grab the finite element of the first child
+ const auto& deformationLocalFiniteElement = localView.tree().child(_0,0).finiteElement();
+ const auto& orientationLocalFiniteElement = localView.tree().child(_1,0).finiteElement();
#ifdef PROJECTED_INTERPOLATION
- using LocalDeformationGFEFunctionType = GFE::LocalProjectedFEFunction<gridDim, DT, decltype(deformationLocalFiniteElement), RealTuple<RT,gridDim> >;
- using LocalOrientationGFEFunctionType = GFE::LocalProjectedFEFunction<gridDim, DT, decltype(orientationLocalFiniteElement), Rotation<RT,gridDim> >;
+ using LocalDeformationGFEFunctionType = GFE::LocalProjectedFEFunction<gridDim, DT, decltype(deformationLocalFiniteElement), RealTuple<RT,gridDim> >;
+ using LocalOrientationGFEFunctionType = GFE::LocalProjectedFEFunction<gridDim, DT, decltype(orientationLocalFiniteElement), Rotation<RT,gridDim> >;
#else
- using LocalDeformationGFEFunctionType = LocalGeodesicFEFunction<gridDim, DT, decltype(deformationLocalFiniteElement), RealTuple<RT,gridDim> >;
- using LocalOrientationGFEFunctionType = LocalGeodesicFEFunction<gridDim, DT, decltype(orientationLocalFiniteElement), Rotation<RT,gridDim> >;
+ using LocalDeformationGFEFunctionType = LocalGeodesicFEFunction<gridDim, DT, decltype(deformationLocalFiniteElement), RealTuple<RT,gridDim> >;
+ using LocalOrientationGFEFunctionType = LocalGeodesicFEFunction<gridDim, DT, decltype(orientationLocalFiniteElement), Rotation<RT,gridDim> >;
#endif
- LocalDeformationGFEFunctionType localDeformationGFEFunction(deformationLocalFiniteElement,localDeformationConfiguration);
- LocalOrientationGFEFunctionType localOrientationGFEFunction(orientationLocalFiniteElement,localOrientationConfiguration);
+ LocalDeformationGFEFunctionType localDeformationGFEFunction(deformationLocalFiniteElement,localDeformationConfiguration);
+ LocalOrientationGFEFunctionType localOrientationGFEFunction(orientationLocalFiniteElement,localOrientationConfiguration);
- RT energy = 0;
+ RT energy = 0;
- int quadOrder = (element.type().isSimplex()) ? deformationLocalFiniteElement.localBasis().order()
+ int quadOrder = (element.type().isSimplex()) ? deformationLocalFiniteElement.localBasis().order()
: deformationLocalFiniteElement.localBasis().order() * gridDim;
- const auto& quad = QuadratureRules<DT, gridDim>::rule(element.type(), quadOrder);
+ const auto& quad = QuadratureRules<DT, gridDim>::rule(element.type(), quadOrder);
- for (size_t pt=0; pt<quad.size(); pt++)
- {
+ for (size_t pt=0; pt<quad.size(); pt++)
+ {
// Local position of the quadrature point
const FieldVector<DT,gridDim>& quadPos = quad[pt].position();
@@ -115,7 +115,7 @@ private:
// The derivative of the deformation defined on the actual element
typename LocalDeformationGFEFunctionType::DerivativeType deformationDerivative;
for (size_t comp=0; comp<deformationReferenceDerivative.N(); comp++)
- jacobianInverseTransposed.mv(deformationReferenceDerivative[comp], deformationDerivative[comp]);
+ jacobianInverseTransposed.mv(deformationReferenceDerivative[comp], deformationDerivative[comp]);
// Integrate the energy density
if (localDensityElasticity_)
@@ -130,7 +130,7 @@ private:
// The derivative of the rotation defined on the actual element
typename LocalOrientationGFEFunctionType::DerivativeType orientationDerivative;
for (size_t comp=0; comp<orientationReferenceDerivative.N(); comp++)
- jacobianInverseTransposed.mv(orientationReferenceDerivative[comp], orientationDerivative[comp]);
+ jacobianInverseTransposed.mv(orientationReferenceDerivative[comp], orientationDerivative[comp]);
energy += weightWithintegrationElement * (*localDensityGFE_)(x,
deformationValue,
@@ -138,15 +138,15 @@ private:
orientationValue,
orientationDerivative);
}
- }
+ }
- return energy;
- }
+ return energy;
+ }
-protected:
- const std::shared_ptr<Elasticity::LocalDensity<gridDim,RT,DT>> localDensityElasticity_ = nullptr;
- const std::shared_ptr<GFE::LocalDensity<gridDim,RT,DT>> localDensityGFE_ = nullptr;
-};
+ protected:
+ const std::shared_ptr<Elasticity::LocalDensity<gridDim,RT,DT> > localDensityElasticity_ = nullptr;
+ const std::shared_ptr<GFE::LocalDensity<gridDim,RT,DT> > localDensityGFE_ = nullptr;
+ };
} // namespace Dune::GFE
diff --git a/dune/gfe/assemblers/mixedgfeassembler.hh b/dune/gfe/assemblers/mixedgfeassembler.hh
index fe7b1f5b..a57b86d7 100644
--- a/dune/gfe/assemblers/mixedgfeassembler.hh
+++ b/dune/gfe/assemblers/mixedgfeassembler.hh
@@ -15,65 +15,65 @@
template <class Basis, class TargetSpace0, class TargetSpace1>
class MixedGFEAssembler {
- typedef typename Basis::GridView GridView;
- typedef typename GridView::template Codim<0>::template Partition<Dune::Interior_Partition>::Iterator ElementIterator;
+ typedef typename Basis::GridView GridView;
+ typedef typename GridView::template Codim<0>::template Partition<Dune::Interior_Partition>::Iterator ElementIterator;
- //! Dimension of the grid.
- constexpr static int gridDim = GridView::dimension;
+ //! Dimension of the grid.
+ constexpr static int gridDim = GridView::dimension;
- //! Dimension of a tangent space
- constexpr static int blocksize0 = TargetSpace0::TangentVector::dimension;
- constexpr static int blocksize1 = TargetSpace1::TangentVector::dimension;
+ //! Dimension of a tangent space
+ constexpr static int blocksize0 = TargetSpace0::TangentVector::dimension;
+ constexpr static int blocksize1 = TargetSpace1::TangentVector::dimension;
- //!
- typedef Dune::BCRSMatrix<Dune::FieldMatrix<double, blocksize0, blocksize0> > MatrixBlock00;
- typedef Dune::BCRSMatrix<Dune::FieldMatrix<double, blocksize0, blocksize1> > MatrixBlock01;
- typedef Dune::BCRSMatrix<Dune::FieldMatrix<double, blocksize1, blocksize0> > MatrixBlock10;
- typedef Dune::BCRSMatrix<Dune::FieldMatrix<double, blocksize1, blocksize1> > MatrixBlock11;
+ //!
+ typedef Dune::BCRSMatrix<Dune::FieldMatrix<double, blocksize0, blocksize0> > MatrixBlock00;
+ typedef Dune::BCRSMatrix<Dune::FieldMatrix<double, blocksize0, blocksize1> > MatrixBlock01;
+ typedef Dune::BCRSMatrix<Dune::FieldMatrix<double, blocksize1, blocksize0> > MatrixBlock10;
+ typedef Dune::BCRSMatrix<Dune::FieldMatrix<double, blocksize1, blocksize1> > MatrixBlock11;
public:
- typedef Dune::MultiTypeBlockMatrix<Dune::MultiTypeBlockVector<MatrixBlock00,MatrixBlock01>,
- Dune::MultiTypeBlockVector<MatrixBlock10,MatrixBlock11> > MatrixType;
- const Basis basis_;
+ typedef Dune::MultiTypeBlockMatrix<Dune::MultiTypeBlockVector<MatrixBlock00,MatrixBlock01>,
+ Dune::MultiTypeBlockVector<MatrixBlock10,MatrixBlock11> > MatrixType;
+ const Basis basis_;
- MixedLocalGeodesicFEStiffness<Basis,
- TargetSpace0,
- TargetSpace1>* localStiffness_;
+ MixedLocalGeodesicFEStiffness<Basis,
+ TargetSpace0,
+ TargetSpace1>* localStiffness_;
public:
- /** \brief Constructor for a given grid */
- MixedGFEAssembler(const Basis& basis,
- MixedLocalGeodesicFEStiffness<Basis, TargetSpace0, TargetSpace1>* localStiffness)
- : basis_(basis),
- localStiffness_(localStiffness)
- {}
-
- /** \brief Assemble the tangent stiffness matrix and the functional gradient together
- *
- * This is more efficient than computing them separately, because you need the gradient
- * anyway to compute the Riemannian Hessian.
- */
- virtual void assembleGradientAndHessian(const std::vector<TargetSpace0>& configuration0,
- const std::vector<TargetSpace1>& configuration1,
- Dune::BlockVector<Dune::FieldVector<double, blocksize0> >& gradient0,
- Dune::BlockVector<Dune::FieldVector<double, blocksize1> >& gradient1,
- MatrixType& hessian,
- bool computeOccupationPattern=true) const;
+ /** \brief Constructor for a given grid */
+ MixedGFEAssembler(const Basis& basis,
+ MixedLocalGeodesicFEStiffness<Basis, TargetSpace0, TargetSpace1>* localStiffness)
+ : basis_(basis),
+ localStiffness_(localStiffness)
+ {}
+
+ /** \brief Assemble the tangent stiffness matrix and the functional gradient together
+ *
+ * This is more efficient than computing them separately, because you need the gradient
+ * anyway to compute the Riemannian Hessian.
+ */
+ virtual void assembleGradientAndHessian(const std::vector<TargetSpace0>& configuration0,
+ const std::vector<TargetSpace1>& configuration1,
+ Dune::BlockVector<Dune::FieldVector<double, blocksize0> >& gradient0,
+ Dune::BlockVector<Dune::FieldVector<double, blocksize1> >& gradient1,
+ MatrixType& hessian,
+ bool computeOccupationPattern=true) const;
#if 0
- /** \brief Assemble the gradient */
- virtual void assembleGradient(const std::vector<TargetSpace>& sol,
- Dune::BlockVector<Dune::FieldVector<double, blocksize> >& grad) const;
+ /** \brief Assemble the gradient */
+ virtual void assembleGradient(const std::vector<TargetSpace>& sol,
+ Dune::BlockVector<Dune::FieldVector<double, blocksize> >& grad) const;
#endif
- /** \brief Compute the energy of a deformation state */
- virtual double computeEnergy(const std::vector<TargetSpace0>& configuration0,
- const std::vector<TargetSpace1>& configuration1) const;
+ /** \brief Compute the energy of a deformation state */
+ virtual double computeEnergy(const std::vector<TargetSpace0>& configuration0,
+ const std::vector<TargetSpace1>& configuration1) const;
- //protected:
- void getMatrixPattern(Dune::MatrixIndexSet& nb00,
- Dune::MatrixIndexSet& nb01,
- Dune::MatrixIndexSet& nb10,
- Dune::MatrixIndexSet& nb11) const;
+ //protected:
+ void getMatrixPattern(Dune::MatrixIndexSet& nb00,
+ Dune::MatrixIndexSet& nb01,
+ Dune::MatrixIndexSet& nb10,
+ Dune::MatrixIndexSet& nb11) const;
}; // end class
@@ -86,45 +86,45 @@ getMatrixPattern(Dune::MatrixIndexSet& nb00,
Dune::MatrixIndexSet& nb10,
Dune::MatrixIndexSet& nb11) const
{
- nb00.resize(basis_.size({0}), basis_.size({0}));
- nb01.resize(basis_.size({0}), basis_.size({1}));
- nb10.resize(basis_.size({1}), basis_.size({0}));
- nb11.resize(basis_.size({1}), basis_.size({1}));
+ nb00.resize(basis_.size({0}), basis_.size({0}));
+ nb01.resize(basis_.size({0}), basis_.size({1}));
+ nb10.resize(basis_.size({1}), basis_.size({0}));
+ nb11.resize(basis_.size({1}), basis_.size({1}));
+
+ // A view on the FE basis on a single element
+ auto localView = basis_.localView();
+
+ // Loop over grid elements
+ for (const auto& element : elements(basis_.gridView(), Dune::Partitions::interior))
+ {
+ // Bind the local FE basis view to the current element
+ localView.bind(element);
+ // Add element stiffness matrix onto the global stiffness matrix
+ for (size_t i=0; i<localView.size(); i++)
+ {
+ // The global index of the i-th local degree of freedom of the element 'e'
+ auto row = localView.index(i);
- // A view on the FE basis on a single element
- auto localView = basis_.localView();
+ for (size_t j=0; j<localView.size(); j++ )
+ {
+ // The global index of the j-th local degree of freedom of the element 'e'
+ auto col = localView.index(j);
- // Loop over grid elements
- for (const auto& element : elements(basis_.gridView(), Dune::Partitions::interior))
- {
- // Bind the local FE basis view to the current element
- localView.bind(element);
- // Add element stiffness matrix onto the global stiffness matrix
- for (size_t i=0; i<localView.size(); i++)
- {
- // The global index of the i-th local degree of freedom of the element 'e'
- auto row = localView.index(i);
-
- for (size_t j=0; j<localView.size(); j++ )
- {
- // The global index of the j-th local degree of freedom of the element 'e'
- auto col = localView.index(j);
-
- if (row[0]==0 and col[0]==0)
- nb00.add(row[1],col[1]);
- if (row[0]==0 and col[0]==1)
- nb01.add(row[1],col[1]);
- if (row[0]==1 and col[0]==0)
- nb10.add(row[1],col[1]);
- if (row[0]==1 and col[0]==1)
- nb11.add(row[1],col[1]);
-
- }
+ if (row[0]==0 and col[0]==0)
+ nb00.add(row[1],col[1]);
+ if (row[0]==0 and col[0]==1)
+ nb01.add(row[1],col[1]);
+ if (row[0]==1 and col[0]==0)
+ nb10.add(row[1],col[1]);
+ if (row[0]==1 and col[0]==1)
+ nb11.add(row[1],col[1]);
- }
+ }
}
+ }
+
}
template <class Basis, class TargetSpace0, class TargetSpace1>
@@ -136,123 +136,123 @@ assembleGradientAndHessian(const std::vector<TargetSpace0>& configuration0,
MatrixType& hessian,
bool computeOccupationPattern) const
{
- if (computeOccupationPattern) {
+ if (computeOccupationPattern) {
+
+ Dune::MatrixIndexSet pattern00;
+ Dune::MatrixIndexSet pattern01;
+ Dune::MatrixIndexSet pattern10;
+ Dune::MatrixIndexSet pattern11;
+
+ getMatrixPattern(pattern00, pattern01, pattern10, pattern11);
+
+ using namespace Dune::TypeTree::Indices;
+ pattern00.exportIdx(hessian[_0][_0]);
+ pattern01.exportIdx(hessian[_0][_1]);
+ pattern10.exportIdx(hessian[_1][_0]);
+ pattern11.exportIdx(hessian[_1][_1]);
+
+ }
+
+ hessian = 0;
+
+ gradient0.resize(configuration0.size());
+ gradient0 = 0;
+ gradient1.resize(configuration1.size());
+ gradient1 = 0;
+
+ // A view on the FE basis on a single element
+ auto localView = basis_.localView();
+ for (const auto& element : elements(basis_.gridView(), Dune::Partitions::interior))
+ {
+ // Bind the local FE basis view to the current element
+ localView.bind(element);
+ using namespace Dune::TypeTree::Indices;
+
+ const int nDofs0 = localView.tree().child(_0,0).finiteElement().size();
+ const int nDofs1 = localView.tree().child(_1,0).finiteElement().size();
+ // This loop reads out the pattern for a local matrix; in each element, we have localView.size() degrees of freedom; from the composite and powerbasis layers
+ // nDofs0 are the degrees of freedom for *one* subspacebasis of the power basis of the displacement part;
+ // nDofs1 are the degrees of freedom for *one* subspacebasis of the power basis of the rotational part
+ // this is why the indices (_0,0) and (_1,0) are used: _0 takes the whole displacement part and _1 the whole rotational part; and 0 the first subspacebasis respectively
+ // Extract local solution
+ std::vector<TargetSpace0> localConfiguration0(nDofs0);
+ std::vector<TargetSpace1> localConfiguration1(nDofs1);
+
+ for (int i=0; i<nDofs0+nDofs1; i++)
+ {
+ int localIndexI = 0;
+ if (i < nDofs0) {
+ auto& node = localView.tree().child(_0,0);
+ localIndexI = node.localIndex(i);
+ } else {
+ auto& node = localView.tree().child(_1,0);
+ localIndexI = node.localIndex(i-nDofs0);
+ }
+ auto multiIndex = localView.index(localIndexI);
+ //CompositeBasis number is contained in multiIndex[0], the Subspacebasis is contained in multiIndex[2]
+ //multiIndex[1] contains the actual index
+ if (multiIndex[0] == 0)
+ localConfiguration0[i] = configuration0[multiIndex[1]];
+ else if (multiIndex[0] == 1)
+ localConfiguration1[i-nDofs0] = configuration1[multiIndex[1]];
+ }
- Dune::MatrixIndexSet pattern00;
- Dune::MatrixIndexSet pattern01;
- Dune::MatrixIndexSet pattern10;
- Dune::MatrixIndexSet pattern11;
+ std::vector<Dune::FieldVector<double,blocksize0> > localGradient0(nDofs0);
+ std::vector<Dune::FieldVector<double,blocksize1> > localGradient1(nDofs1);
- getMatrixPattern(pattern00, pattern01, pattern10, pattern11);
+ // setup local matrix and gradient
+ localStiffness_->assembleGradientAndHessian(localView,
+ localConfiguration0, localConfiguration1,
+ localGradient0, localGradient1);
- using namespace Dune::TypeTree::Indices;
- pattern00.exportIdx(hessian[_0][_0]);
- pattern01.exportIdx(hessian[_0][_1]);
- pattern10.exportIdx(hessian[_1][_0]);
- pattern11.exportIdx(hessian[_1][_1]);
+ // Add element matrix to global stiffness matrix
+ for (int i=0; i<nDofs0+nDofs1; i++)
+ {
+ int localIndexRow = 0;
+ if (i < nDofs0) {
+ auto& node = localView.tree().child(_0,0);
+ localIndexRow = node.localIndex(i);
+ } else {
+ auto& node = localView.tree().child(_1,0);
+ localIndexRow = node.localIndex(i-nDofs0);
+ }
+
+ auto row = localView.index(localIndexRow);
+
+ for (int j=0; j<nDofs0+nDofs1; j++ )
+ {
+ int localIndexCol = 0;
+ if (j < nDofs0) {
+ auto& node = localView.tree().child(_0,0);
+ localIndexCol = node.localIndex(j);
+ } else {
+ auto& node = localView.tree().child(_1,0);
+ localIndexCol = node.localIndex(j-nDofs0);
+ }
- }
+ auto col = localView.index(localIndexCol);
- hessian = 0;
+ if (row[0]==0 and col[0]==0)
+ hessian[_0][_0][row[1]][col[1]] += localStiffness_->A00_[i][j];
- gradient0.resize(configuration0.size());
- gradient0 = 0;
- gradient1.resize(configuration1.size());
- gradient1 = 0;
+ if (row[0]==0 and col[0]==1)
+ hessian[_0][_1][row[1]][col[1]] += localStiffness_->A01_[i][j-nDofs0];
- // A view on the FE basis on a single element
- auto localView = basis_.localView();
- for (const auto& element : elements(basis_.gridView(), Dune::Partitions::interior))
- {
- // Bind the local FE basis view to the current element
- localView.bind(element);
- using namespace Dune::TypeTree::Indices;
-
- const int nDofs0 = localView.tree().child(_0,0).finiteElement().size();
- const int nDofs1 = localView.tree().child(_1,0).finiteElement().size();
- // This loop reads out the pattern for a local matrix; in each element, we have localView.size() degrees of freedom; from the composite and powerbasis layers
- // nDofs0 are the degrees of freedom for *one* subspacebasis of the power basis of the displacement part;
- // nDofs1 are the degrees of freedom for *one* subspacebasis of the power basis of the rotational part
- // this is why the indices (_0,0) and (_1,0) are used: _0 takes the whole displacement part and _1 the whole rotational part; and 0 the first subspacebasis respectively
- // Extract local solution
- std::vector<TargetSpace0> localConfiguration0(nDofs0);
- std::vector<TargetSpace1> localConfiguration1(nDofs1);
-
- for (int i=0; i<nDofs0+nDofs1; i++)
- {
- int localIndexI = 0;
- if (i < nDofs0) {
- auto& node = localView.tree().child(_0,0);
- localIndexI = node.localIndex(i);
- } else {
- auto& node = localView.tree().child(_1,0);
- localIndexI = node.localIndex(i-nDofs0);
- }
- auto multiIndex = localView.index(localIndexI);
- //CompositeBasis number is contained in multiIndex[0], the Subspacebasis is contained in multiIndex[2]
- //multiIndex[1] contains the actual index
- if (multiIndex[0] == 0)
- localConfiguration0[i] = configuration0[multiIndex[1]];
- else if (multiIndex[0] == 1)
- localConfiguration1[i-nDofs0] = configuration1[multiIndex[1]];
- }
+ if (row[0]==1 and col[0]==0)
+ hessian[_1][_0][row[1]][col[1]] += localStiffness_->A10_[i-nDofs0][j];
- std::vector<Dune::FieldVector<double,blocksize0> > localGradient0(nDofs0);
- std::vector<Dune::FieldVector<double,blocksize1> > localGradient1(nDofs1);
-
- // setup local matrix and gradient
- localStiffness_->assembleGradientAndHessian(localView,
- localConfiguration0, localConfiguration1,
- localGradient0, localGradient1);
-
- // Add element matrix to global stiffness matrix
- for (int i=0; i<nDofs0+nDofs1; i++)
- {
- int localIndexRow = 0;
- if (i < nDofs0) {
- auto& node = localView.tree().child(_0,0);
- localIndexRow = node.localIndex(i);
- } else {
- auto& node = localView.tree().child(_1,0);
- localIndexRow = node.localIndex(i-nDofs0);
- }
-
- auto row = localView.index(localIndexRow);
-
- for (int j=0; j<nDofs0+nDofs1; j++ )
- {
- int localIndexCol = 0;
- if (j < nDofs0) {
- auto& node = localView.tree().child(_0,0);
- localIndexCol = node.localIndex(j);
- } else {
- auto& node = localView.tree().child(_1,0);
- localIndexCol = node.localIndex(j-nDofs0);
- }
-
- auto col = localView.index(localIndexCol);
-
- if (row[0]==0 and col[0]==0)
- hessian[_0][_0][row[1]][col[1]] += localStiffness_->A00_[i][j];
-
- if (row[0]==0 and col[0]==1)
- hessian[_0][_1][row[1]][col[1]] += localStiffness_->A01_[i][j-nDofs0];
-
- if (row[0]==1 and col[0]==0)
- hessian[_1][_0][row[1]][col[1]] += localStiffness_->A10_[i-nDofs0][j];
-
- if (row[0]==1 and col[0]==1)
- hessian[_1][_1][row[1]][col[1]] += localStiffness_->A11_[i-nDofs0][j-nDofs0];
- }
-
- // Add local gradient to global gradient
- if (row[0] == 0)
- gradient0[row[1]] += localGradient0[i];
- else
- gradient1[row[1]] += localGradient1[i-nDofs0];
- }
+ if (row[0]==1 and col[0]==1)
+ hessian[_1][_1][row[1]][col[1]] += localStiffness_->A11_[i-nDofs0][j-nDofs0];
+ }
+ // Add local gradient to global gradient
+ if (row[0] == 0)
+ gradient0[row[1]] += localGradient0[i];
+ else
+ gradient1[row[1]] += localGradient1[i-nDofs0];
}
+
+ }
}
#if 0
@@ -261,37 +261,37 @@ void GeodesicFEAssembler<Basis,TargetSpace>::
assembleGradient(const std::vector<TargetSpace>& sol,
Dune::BlockVector<Dune::FieldVector<double, blocksize> >& grad) const
{
- if (sol.size()!=basis_.size())
- DUNE_THROW(Dune::Exception, "Solution vector doesn't match the grid!");
+ if (sol.size()!=basis_.size())
+ DUNE_THROW(Dune::Exception, "Solution vector doesn't match the grid!");
- grad.resize(sol.size());
- grad = 0;
+ grad.resize(sol.size());
+ grad = 0;
- ElementIterator it = basis_.getGridView().template begin<0,Dune::Interior_Partition>();
- ElementIterator endIt = basis_.getGridView().template end<0,Dune::Interior_Partition>();
+ ElementIterator it = basis_.getGridView().template begin<0,Dune::Interior_Partition>();
+ ElementIterator endIt = basis_.getGridView().template end<0,Dune::Interior_Partition>();
- // Loop over all elements
- for (; it!=endIt; ++it) {
+ // Loop over all elements
+ for (; it!=endIt; ++it) {
- // A 1d grid has two vertices
- const int nDofs = basis_.getLocalFiniteElement(*it).localBasis().size();
+ // A 1d grid has two vertices
+ const int nDofs = basis_.getLocalFiniteElement(*it).localBasis().size();
- // Extract local solution
- std::vector<TargetSpace> localSolution(nDofs);
+ // Extract local solution
+ std::vector<TargetSpace> localSolution(nDofs);
- for (int i=0; i<nDofs; i++)
- localSolution[i] = sol[basis_.index(*it,i)];
+ for (int i=0; i<nDofs; i++)
+ localSolution[i] = sol[basis_.index(*it,i)];
- // Assemble local gradient
- std::vector<Dune::FieldVector<double,blocksize> > localGradient(nDofs);
+ // Assemble local gradient
+ std::vector<Dune::FieldVector<double,blocksize> > localGradient(nDofs);
- localStiffness_->assembleGradient(*it, basis_.getLocalFiniteElement(*it), localSolution, localGradient);
+ localStiffness_->assembleGradient(*it, basis_.getLocalFiniteElement(*it), localSolution, localGradient);
- // Add to global gradient
- for (int i=0; i<nDofs; i++)
- grad[basis_.index(*it,i)] += localGradient[i];
+ // Add to global gradient
+ for (int i=0; i<nDofs; i++)
+ grad[basis_.index(*it,i)] += localGradient[i];
- }
+ }
}
#endif
@@ -301,61 +301,60 @@ double MixedGFEAssembler<Basis, TargetSpace0, TargetSpace1>::
computeEnergy(const std::vector<TargetSpace0>& configuration0,
const std::vector<TargetSpace1>& configuration1) const
{
- double energy = 0;
+ double energy = 0;
- if (configuration0.size()!=basis_.size({0}))
- DUNE_THROW(Dune::Exception, "Configuration vector 0 doesn't match the basis!");
+ if (configuration0.size()!=basis_.size({0}))
+ DUNE_THROW(Dune::Exception, "Configuration vector 0 doesn't match the basis!");
- if (configuration1.size()!=basis_.size({1}))
- DUNE_THROW(Dune::Exception, "Configuration vector 1 doesn't match the basis!");
+ if (configuration1.size()!=basis_.size({1}))
+ DUNE_THROW(Dune::Exception, "Configuration vector 1 doesn't match the basis!");
- // A view on the FE basis on a single element
- auto localView = basis_.localView();
+ // A view on the FE basis on a single element
+ auto localView = basis_.localView();
- // Loop over all elements
- for (const auto& element : elements(basis_.gridView(), Dune::Partitions::interior))
- {
- // Bind the local FE basis view to the current element
- localView.bind(element);
-
- // Number of degrees of freedom on this element
- using namespace Dune::TypeTree::Indices;
- const int nDofs0 = localView.tree().child(_0,0).finiteElement().size();
- const int nDofs1 = localView.tree().child(_1,0).finiteElement().size();
-
- std::vector<TargetSpace0> localConfiguration0(nDofs0);
- std::vector<TargetSpace1> localConfiguration1(nDofs1);
-
- for (int i=0; i<nDofs0+nDofs1; i++)
- {
- int localIndexI = 0;
- if (i < nDofs0) {
- auto& node = localView.tree().child(_0,0);
- localIndexI = node.localIndex(i);
- } else {
- auto& node = localView.tree().child(_1,0);
- localIndexI = node.localIndex(i-nDofs0);
- }
-
- auto multiIndex = localView.index(localIndexI);
-
- // The CompositeBasis number is contained in multiIndex[0]
- // multiIndex[1] contains the actual index
- if (multiIndex[0] == 0)
- localConfiguration0[i] = configuration0[multiIndex[1]];
- else if (multiIndex[0] == 1)
- localConfiguration1[i-nDofs0] = configuration1[multiIndex[1]];
- }
+ // Loop over all elements
+ for (const auto& element : elements(basis_.gridView(), Dune::Partitions::interior))
+ {
+ // Bind the local FE basis view to the current element
+ localView.bind(element);
- energy += localStiffness_->energy(localView,
- localConfiguration0,
- localConfiguration1);
+ // Number of degrees of freedom on this element
+ using namespace Dune::TypeTree::Indices;
+ const int nDofs0 = localView.tree().child(_0,0).finiteElement().size();
+ const int nDofs1 = localView.tree().child(_1,0).finiteElement().size();
+ std::vector<TargetSpace0> localConfiguration0(nDofs0);
+ std::vector<TargetSpace1> localConfiguration1(nDofs1);
+
+ for (int i=0; i<nDofs0+nDofs1; i++)
+ {
+ int localIndexI = 0;
+ if (i < nDofs0) {
+ auto& node = localView.tree().child(_0,0);
+ localIndexI = node.localIndex(i);
+ } else {
+ auto& node = localView.tree().child(_1,0);
+ localIndexI = node.localIndex(i-nDofs0);
+ }
+
+ auto multiIndex = localView.index(localIndexI);
+
+ // The CompositeBasis number is contained in multiIndex[0]
+ // multiIndex[1] contains the actual index
+ if (multiIndex[0] == 0)
+ localConfiguration0[i] = configuration0[multiIndex[1]];
+ else if (multiIndex[0] == 1)
+ localConfiguration1[i-nDofs0] = configuration1[multiIndex[1]];
}
- return energy;
+ energy += localStiffness_->energy(localView,
+ localConfiguration0,
+ localConfiguration1);
+
+ }
+
+ return energy;
}
#endif
-
diff --git a/dune/gfe/assemblers/mixedlocalgeodesicfestiffness.hh b/dune/gfe/assemblers/mixedlocalgeodesicfestiffness.hh
index d0245be4..59c946a5 100644
--- a/dune/gfe/assemblers/mixedlocalgeodesicfestiffness.hh
+++ b/dune/gfe/assemblers/mixedlocalgeodesicfestiffness.hh
@@ -8,66 +8,65 @@
template<class Basis, class DeformationTargetSpace, class OrientationTargetSpace>
class MixedLocalGeodesicFEStiffness
{
- // grid types
- typedef typename Basis::GridView GridView;
- typedef typename GridView::ctype DT;
- typedef typename DeformationTargetSpace::ctype RT;
- typedef typename GridView::template Codim<0>::Entity Entity;
+ // grid types
+ typedef typename Basis::GridView GridView;
+ typedef typename GridView::ctype DT;
+ typedef typename DeformationTargetSpace::ctype RT;
+ typedef typename GridView::template Codim<0>::Entity Entity;
- // some other sizes
- constexpr static int gridDim = GridView::dimension;
+ // some other sizes
+ constexpr static int gridDim = GridView::dimension;
public:
- //! Dimension of a tangent space
- constexpr static int deformationBlocksize = DeformationTargetSpace::TangentVector::dimension;
- constexpr static int orientationBlocksize = OrientationTargetSpace::TangentVector::dimension;
+ //! Dimension of a tangent space
+ constexpr static int deformationBlocksize = DeformationTargetSpace::TangentVector::dimension;
+ constexpr static int orientationBlocksize = OrientationTargetSpace::TangentVector::dimension;
- /** \brief Assemble the local stiffness matrix at the current position
+ /** \brief Assemble the local stiffness matrix at the current position
- This default implementation used finite-difference approximations to compute the second derivatives
+ This default implementation used finite-difference approximations to compute the second derivatives
- The formula for the Riemannian Hessian has been taken from Absil, Mahony, Sepulchre:
- 'Optimization algorithms on matrix manifolds', page 107. There it says that
- \f[
- \langle Hess f(x)[\xi], \eta \rangle
- = \frac 12 \frac{d^2}{dt^2} \Big(f(\exp_x(t(\xi + \eta))) - f(\exp_x(t\xi)) - f(\exp_x(t\eta))\Big)\Big|_{t=0}.
- \f]
- We compute that using a finite difference approximation.
+ The formula for the Riemannian Hessian has been taken from Absil, Mahony, Sepulchre:
+ 'Optimization algorithms on matrix manifolds', page 107. There it says that
+ \f[
+ \langle Hess f(x)[\xi], \eta \rangle
+ = \frac 12 \frac{d^2}{dt^2} \Big(f(\exp_x(t(\xi + \eta))) - f(\exp_x(t\xi)) - f(\exp_x(t\eta))\Big)\Big|_{t=0}.
+ \f]
+ We compute that using a finite difference approximation.
- */
- virtual void assembleGradientAndHessian(const typename Basis::LocalView& localView,
- const std::vector<DeformationTargetSpace>& localDisplacementConfiguration,
- const std::vector<OrientationTargetSpace>& localOrientationConfiguration,
- std::vector<typename DeformationTargetSpace::TangentVector>& localDeformationGradient,
- std::vector<typename OrientationTargetSpace::TangentVector>& localOrientationGradient)
- {
- DUNE_THROW(Dune::NotImplemented, "!");
- }
+ */
+ virtual void assembleGradientAndHessian(const typename Basis::LocalView& localView,
+ const std::vector<DeformationTargetSpace>& localDisplacementConfiguration,
+ const std::vector<OrientationTargetSpace>& localOrientationConfiguration,
+ std::vector<typename DeformationTargetSpace::TangentVector>& localDeformationGradient,
+ std::vector<typename OrientationTargetSpace::TangentVector>& localOrientationGradient)
+ {
+ DUNE_THROW(Dune::NotImplemented, "!");
+ }
- /** \brief Compute the energy at the current configuration */
- virtual RT energy (const typename Basis::LocalView& localView,
- const std::vector<DeformationTargetSpace>& localDeformationConfiguration,
- const std::vector<OrientationTargetSpace>& localOrientationConfiguration) const = 0;
+ /** \brief Compute the energy at the current configuration */
+ virtual RT energy (const typename Basis::LocalView& localView,
+ const std::vector<DeformationTargetSpace>& localDeformationConfiguration,
+ const std::vector<OrientationTargetSpace>& localOrientationConfiguration) const = 0;
#if 0
- /** \brief Assemble the element gradient of the energy functional
+ /** \brief Assemble the element gradient of the energy functional
- The default implementation in this class uses a finite difference approximation */
- virtual void assembleGradient(const Entity& element,
- const LocalFiniteElement& localFiniteElement,
- const std::vector<TargetSpace>& solution,
- std::vector<typename TargetSpace::TangentVector>& gradient) const;
- {
- DUNE_THROW(Dune::NotImplemented, "!");
- }
+ The default implementation in this class uses a finite difference approximation */
+ virtual void assembleGradient(const Entity& element,
+ const LocalFiniteElement& localFiniteElement,
+ const std::vector<TargetSpace>& solution,
+ std::vector<typename TargetSpace::TangentVector>& gradient) const;
+ {
+ DUNE_THROW(Dune::NotImplemented, "!");
+ }
#endif
- // assembled data
- Dune::Matrix<Dune::FieldMatrix<RT, deformationBlocksize, deformationBlocksize> > A00_;
- Dune::Matrix<Dune::FieldMatrix<RT, deformationBlocksize, orientationBlocksize> > A01_;
- Dune::Matrix<Dune::FieldMatrix<RT, orientationBlocksize, deformationBlocksize> > A10_;
- Dune::Matrix<Dune::FieldMatrix<RT, orientationBlocksize, orientationBlocksize> > A11_;
+ // assembled data
+ Dune::Matrix<Dune::FieldMatrix<RT, deformationBlocksize, deformationBlocksize> > A00_;
+ Dune::Matrix<Dune::FieldMatrix<RT, deformationBlocksize, orientationBlocksize> > A01_;
+ Dune::Matrix<Dune::FieldMatrix<RT, orientationBlocksize, deformationBlocksize> > A10_;
+ Dune::Matrix<Dune::FieldMatrix<RT, orientationBlocksize, orientationBlocksize> > A11_;
};
#endif
-
diff --git a/dune/gfe/assemblers/mixedlocalgfeadolcstiffness.hh b/dune/gfe/assemblers/mixedlocalgfeadolcstiffness.hh
index 73265796..ec81c11b 100644
--- a/dune/gfe/assemblers/mixedlocalgfeadolcstiffness.hh
+++ b/dune/gfe/assemblers/mixedlocalgfeadolcstiffness.hh
@@ -18,63 +18,63 @@
*/
template<class Basis, class TargetSpace0, class TargetSpace1>
class MixedLocalGFEADOLCStiffness
- : public MixedLocalGeodesicFEStiffness<Basis,TargetSpace0,TargetSpace1>
+ : public MixedLocalGeodesicFEStiffness<Basis,TargetSpace0,TargetSpace1>
{
- // grid types
- typedef typename Basis::GridView GridView;
- typedef typename GridView::ctype DT;
- typedef typename TargetSpace0::ctype RT;
- typedef typename GridView::template Codim<0>::Entity Entity;
+ // grid types
+ typedef typename Basis::GridView GridView;
+ typedef typename GridView::ctype DT;
+ typedef typename TargetSpace0::ctype RT;
+ typedef typename GridView::template Codim<0>::Entity Entity;
- // The 'active' target spaces, i.e., the number type is replaced by adouble
- typedef typename TargetSpace0::template rebind<adouble>::other ATargetSpace0;
- typedef typename TargetSpace1::template rebind<adouble>::other ATargetSpace1;
+ // The 'active' target spaces, i.e., the number type is replaced by adouble
+ typedef typename TargetSpace0::template rebind<adouble>::other ATargetSpace0;
+ typedef typename TargetSpace1::template rebind<adouble>::other ATargetSpace1;
- // some other sizes
- constexpr static int gridDim = GridView::dimension;
+ // some other sizes
+ constexpr static int gridDim = GridView::dimension;
public:
- //! Dimension of a tangent space
- constexpr static int blocksize0 = TargetSpace0::TangentVector::dimension;
- constexpr static int blocksize1 = TargetSpace1::TangentVector::dimension;
+ //! Dimension of a tangent space
+ constexpr static int blocksize0 = TargetSpace0::TangentVector::dimension;
+ constexpr static int blocksize1 = TargetSpace1::TangentVector::dimension;
- //! Dimension of the embedding space
- constexpr static int embeddedBlocksize0 = TargetSpace0::EmbeddedTangentVector::dimension;
- constexpr static int embeddedBlocksize1 = TargetSpace1::EmbeddedTangentVector::dimension;
+ //! Dimension of the embedding space
+ constexpr static int embeddedBlocksize0 = TargetSpace0::EmbeddedTangentVector::dimension;
+ constexpr static int embeddedBlocksize1 = TargetSpace1::EmbeddedTangentVector::dimension;
- MixedLocalGFEADOLCStiffness(const MixedLocalGeodesicFEStiffness<Basis, ATargetSpace0,
- ATargetSpace1>* energy, bool adolcScalarMode = false)
+ MixedLocalGFEADOLCStiffness(const MixedLocalGeodesicFEStiffness<Basis, ATargetSpace0,
+ ATargetSpace1>* energy, bool adolcScalarMode = false)
: localEnergy_(energy),
- adolcScalarMode_(adolcScalarMode)
- {}
+ adolcScalarMode_(adolcScalarMode)
+ {}
- /** \brief Compute the energy at the current configuration */
- virtual RT energy (const typename Basis::LocalView& localView,
- const std::vector<TargetSpace0>& localConfiguration0,
- const std::vector<TargetSpace1>& localConfiguration1) const;
+ /** \brief Compute the energy at the current configuration */
+ virtual RT energy (const typename Basis::LocalView& localView,
+ const std::vector<TargetSpace0>& localConfiguration0,
+ const std::vector<TargetSpace1>& localConfiguration1) const;
#if 0
- /** \brief Assemble the element gradient of the energy functional
-
- This uses the automatic differentiation toolbox ADOL_C.
- */
- virtual void assembleGradient(const Entity& element,
- const LocalFiniteElement& localFiniteElement,
- const std::vector<TargetSpace>& solution,
- std::vector<typename TargetSpace::TangentVector>& gradient) const;
+ /** \brief Assemble the element gradient of the energy functional
+
+ This uses the automatic differentiation toolbox ADOL_C.
+ */
+ virtual void assembleGradient(const Entity& element,
+ const LocalFiniteElement& localFiniteElement,
+ const std::vector<TargetSpace>& solution,
+ std::vector<typename TargetSpace::TangentVector>& gradient) const;
#endif
- /** \brief Assemble the local stiffness matrix at the current position
-
- This uses the automatic differentiation toolbox ADOL_C.
- */
- virtual void assembleGradientAndHessian(const typename Basis::LocalView& localView,
- const std::vector<TargetSpace0>& localConfiguration0,
- const std::vector<TargetSpace1>& localConfiguration1,
- std::vector<typename TargetSpace0::TangentVector>& localGradient0,
- std::vector<typename TargetSpace1::TangentVector>& localGradient1);
-
- const MixedLocalGeodesicFEStiffness<Basis, ATargetSpace0, ATargetSpace1>* localEnergy_;
- const bool adolcScalarMode_;
+ /** \brief Assemble the local stiffness matrix at the current position
+
+ This uses the automatic differentiation toolbox ADOL_C.
+ */
+ virtual void assembleGradientAndHessian(const typename Basis::LocalView& localView,
+ const std::vector<TargetSpace0>& localConfiguration0,
+ const std::vector<TargetSpace1>& localConfiguration1,
+ std::vector<typename TargetSpace0::TangentVector>& localGradient0,
+ std::vector<typename TargetSpace1::TangentVector>& localGradient1);
+
+ const MixedLocalGeodesicFEStiffness<Basis, ATargetSpace0, ATargetSpace1>* localEnergy_;
+ const bool adolcScalarMode_;
};
@@ -85,63 +85,63 @@ energy(const typename Basis::LocalView& localView,
const std::vector<TargetSpace0>& localConfiguration0,
const std::vector<TargetSpace1>& localConfiguration1) const
{
- int rank = Dune::MPIHelper::getCommunication().rank();
- double pureEnergy;
-
- std::vector<ATargetSpace0> localAConfiguration0(localConfiguration0.size());
- std::vector<ATargetSpace1> localAConfiguration1(localConfiguration1.size());
-
- trace_on(rank);
-
- adouble energy = 0;
-
- // The following loop is not quite intuitive: we copy the localSolution into an
- // array of FieldVector<double>, go from there to FieldVector<adouble> and
- // only then to ATargetSpace.
- // Rationale: The constructor/assignment-from-vector of TargetSpace frequently
- // contains a projection onto the manifold from the surrounding Euclidean space.
- // ADOL-C needs a function on the whole Euclidean space, hence that projection
- // is part of the function and needs to be taped.
-
- // The following variable cannot be declared inside of the loop, or ADOL-C will report wrong results
- // (Presumably because several independent variables use the same memory location.)
- std::vector<typename ATargetSpace0::CoordinateType> aRaw0(localConfiguration0.size());
- for (size_t i=0; i<localConfiguration0.size(); i++) {
- typename TargetSpace0::CoordinateType raw = localConfiguration0[i].globalCoordinates();
- for (size_t j=0; j<raw.size(); j++)
- aRaw0[i][j] <<= raw[j];
- localAConfiguration0[i] = aRaw0[i]; // may contain a projection onto M -- needs to be done in adouble
- }
-
- std::vector<typename ATargetSpace1::CoordinateType> aRaw1(localConfiguration1.size());
- for (size_t i=0; i<localConfiguration1.size(); i++) {
- typename TargetSpace1::CoordinateType raw = localConfiguration1[i].globalCoordinates();
- for (size_t j=0; j<raw.size(); j++)
- aRaw1[i][j] <<= raw[j];
- localAConfiguration1[i] = aRaw1[i]; // may contain a projection onto M -- needs to be done in adouble
- }
-
- using namespace Dune::TypeTree::Indices;
- try {
- energy = localEnergy_->energy(localView,
+ int rank = Dune::MPIHelper::getCommunication().rank();
+ double pureEnergy;
+
+ std::vector<ATargetSpace0> localAConfiguration0(localConfiguration0.size());
+ std::vector<ATargetSpace1> localAConfiguration1(localConfiguration1.size());
+
+ trace_on(rank);
+
+ adouble energy = 0;
+
+ // The following loop is not quite intuitive: we copy the localSolution into an
+ // array of FieldVector<double>, go from there to FieldVector<adouble> and
+ // only then to ATargetSpace.
+ // Rationale: The constructor/assignment-from-vector of TargetSpace frequently
+ // contains a projection onto the manifold from the surrounding Euclidean space.
+ // ADOL-C needs a function on the whole Euclidean space, hence that projection
+ // is part of the function and needs to be taped.
+
+ // The following variable cannot be declared inside of the loop, or ADOL-C will report wrong results
+ // (Presumably because several independent variables use the same memory location.)
+ std::vector<typename ATargetSpace0::CoordinateType> aRaw0(localConfiguration0.size());
+ for (size_t i=0; i<localConfiguration0.size(); i++) {
+ typename TargetSpace0::CoordinateType raw = localConfiguration0[i].globalCoordinates();
+ for (size_t j=0; j<raw.size(); j++)
+ aRaw0[i][j] <<= raw[j];
+ localAConfiguration0[i] = aRaw0[i]; // may contain a projection onto M -- needs to be done in adouble
+ }
+
+ std::vector<typename ATargetSpace1::CoordinateType> aRaw1(localConfiguration1.size());
+ for (size_t i=0; i<localConfiguration1.size(); i++) {
+ typename TargetSpace1::CoordinateType raw = localConfiguration1[i].globalCoordinates();
+ for (size_t j=0; j<raw.size(); j++)
+ aRaw1[i][j] <<= raw[j];
+ localAConfiguration1[i] = aRaw1[i]; // may contain a projection onto M -- needs to be done in adouble
+ }
+
+ using namespace Dune::TypeTree::Indices;
+ try {
+ energy = localEnergy_->energy(localView,
localAConfiguration0,
localAConfiguration1);
- } catch (Dune::Exception &e) {
- trace_off();
- throw e;
- }
- energy >>= pureEnergy;
-
+ } catch (Dune::Exception &e) {
trace_off();
+ throw e;
+ }
+ energy >>= pureEnergy;
+
+ trace_off();
#if 0
- size_t tape_stats[STAT_SIZE];
- tapestats(1,tape_stats); // reading of tape statistics
- cout<<"maxlive "<<tape_stats[NUM_MAX_LIVES]<<"\n";
- cout<<"tay_stack_size "<<tape_stats[TAY_STACK_SIZE]<<"\n";
- cout<<"total number of operations "<<tape_stats[NUM_OPERATIONS]<<"\n";
- // ..... print other tape stats
+ size_t tape_stats[STAT_SIZE];
+ tapestats(1,tape_stats); // reading of tape statistics
+ cout<<"maxlive "<<tape_stats[NUM_MAX_LIVES]<<"\n";
+ cout<<"tay_stack_size "<<tape_stats[TAY_STACK_SIZE]<<"\n";
+ cout<<"total number of operations "<<tape_stats[NUM_OPERATIONS]<<"\n";
+ // ..... print other tape stats
#endif
- return pureEnergy;
+ return pureEnergy;
}
#if 0
@@ -152,39 +152,39 @@ assembleGradient(const Entity& element,
const std::vector<TargetSpace>& localSolution,
std::vector<typename TargetSpace::TangentVector>& localGradient) const
{
- // Tape energy computation. We may not have to do this every time, but it's comparatively cheap.
- energy(element, localFiniteElement, localSolution);
-
- // Compute the actual gradient
- size_t nDofs = localSolution.size();
- size_t nDoubles = nDofs*embeddedBlocksize;
- std::vector<double> xp(nDoubles);
- int idx=0;
- for (size_t i=0; i<nDofs; i++)
- for (size_t j=0; j<embeddedBlocksize; j++)
- xp[idx++] = localSolution[i].globalCoordinates()[j];
+ // Tape energy computation. We may not have to do this every time, but it's comparatively cheap.
+ energy(element, localFiniteElement, localSolution);
+
+ // Compute the actual gradient
+ size_t nDofs = localSolution.size();
+ size_t nDoubles = nDofs*embeddedBlocksize;
+ std::vector<double> xp(nDoubles);
+ int idx=0;
+ for (size_t i=0; i<nDofs; i++)
+ for (size_t j=0; j<embeddedBlocksize; j++)
+ xp[idx++] = localSolution[i].globalCoordinates()[j];
// Compute gradient
- std::vector<double> g(nDoubles);
- gradient(1,nDoubles,xp.data(),g.data()); // gradient evaluation
-
- // Copy into Dune type
- std::vector<typename TargetSpace::EmbeddedTangentVector> localEmbeddedGradient(localSolution.size());
-
- idx=0;
- for (size_t i=0; i<nDofs; i++)
- for (size_t j=0; j<embeddedBlocksize; j++)
- localEmbeddedGradient[i][j] = g[idx++];
-
-// std::cout << "localEmbeddedGradient:\n";
-// for (size_t i=0; i<nDofs; i++)
-// std::cout << localEmbeddedGradient[i] << std::endl;
-
- // Express gradient in local coordinate system
- for (size_t i=0; i<nDofs; i++) {
- Dune::FieldMatrix<RT,blocksize,embeddedBlocksize> orthonormalFrame = localSolution[i].orthonormalFrame();
- orthonormalFrame.mv(localEmbeddedGradient[i],localGradient[i]);
- }
+ std::vector<double> g(nDoubles);
+ gradient(1,nDoubles,xp.data(),g.data()); // gradient evaluation
+
+ // Copy into Dune type
+ std::vector<typename TargetSpace::EmbeddedTangentVector> localEmbeddedGradient(localSolution.size());
+
+ idx=0;
+ for (size_t i=0; i<nDofs; i++)
+ for (size_t j=0; j<embeddedBlocksize; j++)
+ localEmbeddedGradient[i][j] = g[idx++];
+
+ // std::cout << "localEmbeddedGradient:\n";
+ // for (size_t i=0; i<nDofs; i++)
+ // std::cout << localEmbeddedGradient[i] << std::endl;
+
+ // Express gradient in local coordinate system
+ for (size_t i=0; i<nDofs; i++) {
+ Dune::FieldMatrix<RT,blocksize,embeddedBlocksize> orthonormalFrame = localSolution[i].orthonormalFrame();
+ orthonormalFrame.mv(localEmbeddedGradient[i],localGradient[i]);
+ }
}
#endif
@@ -201,344 +201,343 @@ assembleGradientAndHessian(const typename Basis::LocalView& localView,
std::vector<typename TargetSpace0::TangentVector>& localGradient0,
std::vector<typename TargetSpace1::TangentVector>& localGradient1)
{
- int rank = Dune::MPIHelper::getCommunication().rank();
- // Tape energy computation. We may not have to do this every time, but it's comparatively cheap.
- energy(localView, localConfiguration0, localConfiguration1);
-
- /////////////////////////////////////////////////////////////////
- // Compute the gradient. It is needed to transform the Hessian
- // into the correct coordinates.
- /////////////////////////////////////////////////////////////////
-
- // Compute the actual gradient
- size_t nDofs0 = localConfiguration0.size();
- size_t nDofs1 = localConfiguration1.size();
- size_t nDoubles = nDofs0*embeddedBlocksize0 + nDofs1*embeddedBlocksize1;
-
- std::vector<double> xp(nDoubles);
- int idx=0;
- for (size_t i=0; i<localConfiguration0.size(); i++)
- for (size_t j=0; j<embeddedBlocksize0; j++)
- xp[idx++] = localConfiguration0[i].globalCoordinates()[j];
-
- for (size_t i=0; i<localConfiguration1.size(); i++)
- for (size_t j=0; j<embeddedBlocksize1; j++)
- xp[idx++] = localConfiguration1[i].globalCoordinates()[j];
+ int rank = Dune::MPIHelper::getCommunication().rank();
+ // Tape energy computation. We may not have to do this every time, but it's comparatively cheap.
+ energy(localView, localConfiguration0, localConfiguration1);
+
+ /////////////////////////////////////////////////////////////////
+ // Compute the gradient. It is needed to transform the Hessian
+ // into the correct coordinates.
+ /////////////////////////////////////////////////////////////////
+
+ // Compute the actual gradient
+ size_t nDofs0 = localConfiguration0.size();
+ size_t nDofs1 = localConfiguration1.size();
+ size_t nDoubles = nDofs0*embeddedBlocksize0 + nDofs1*embeddedBlocksize1;
+
+ std::vector<double> xp(nDoubles);
+ int idx=0;
+ for (size_t i=0; i<localConfiguration0.size(); i++)
+ for (size_t j=0; j<embeddedBlocksize0; j++)
+ xp[idx++] = localConfiguration0[i].globalCoordinates()[j];
+
+ for (size_t i=0; i<localConfiguration1.size(); i++)
+ for (size_t j=0; j<embeddedBlocksize1; j++)
+ xp[idx++] = localConfiguration1[i].globalCoordinates()[j];
// Compute gradient
- std::vector<double> g(nDoubles);
- gradient(rank,nDoubles,xp.data(),g.data()); // gradient evaluation
+ std::vector<double> g(nDoubles);
+ gradient(rank,nDoubles,xp.data(),g.data()); // gradient evaluation
- // Copy into Dune type
- std::vector<typename TargetSpace0::EmbeddedTangentVector> localEmbeddedGradient0(localConfiguration0.size());
- std::vector<typename TargetSpace1::EmbeddedTangentVector> localEmbeddedGradient1(localConfiguration1.size());
+ // Copy into Dune type
+ std::vector<typename TargetSpace0::EmbeddedTangentVector> localEmbeddedGradient0(localConfiguration0.size());
+ std::vector<typename TargetSpace1::EmbeddedTangentVector> localEmbeddedGradient1(localConfiguration1.size());
- idx=0;
- for (size_t i=0; i<localConfiguration0.size(); i++) {
- for (size_t j=0; j<embeddedBlocksize0; j++)
- localEmbeddedGradient0[i][j] = g[idx++];
+ idx=0;
+ for (size_t i=0; i<localConfiguration0.size(); i++) {
+ for (size_t j=0; j<embeddedBlocksize0; j++)
+ localEmbeddedGradient0[i][j] = g[idx++];
- // Express gradient in local coordinate system
- localConfiguration0[i].orthonormalFrame().mv(localEmbeddedGradient0[i],localGradient0[i]);
- }
-
- for (size_t i=0; i<localConfiguration1.size(); i++) {
- for (size_t j=0; j<embeddedBlocksize1; j++)
- localEmbeddedGradient1[i][j] = g[idx++];
+ // Express gradient in local coordinate system
+ localConfiguration0[i].orthonormalFrame().mv(localEmbeddedGradient0[i],localGradient0[i]);
+ }
- // Express gradient in local coordinate system
- localConfiguration1[i].orthonormalFrame().mv(localEmbeddedGradient1[i],localGradient1[i]);
- }
+ for (size_t i=0; i<localConfiguration1.size(); i++) {
+ for (size_t j=0; j<embeddedBlocksize1; j++)
+ localEmbeddedGradient1[i][j] = g[idx++];
- /////////////////////////////////////////////////////////////////
- // Compute Hessian
- /////////////////////////////////////////////////////////////////
-
- // We compute the Hessian of the energy functional using the ADOL-C system.
- // Since ADOL-C does not know about nonlinear spaces, what we get is actually
- // the Hessian of a prolongation of the energy functional into the surrounding
- // Euclidean space. To obtain the Riemannian Hessian from this we apply the
- // formula described in Absil, Mahoney, Trumpf, "An extrinsic look at the Riemannian Hessian".
- // This formula consists of two steps:
- // 1) Remove all entries of the Hessian pertaining to the normal space of the
- // manifold. In the aforementioned paper this is done by projection onto the
- // tangent space. Since we want a matrix that is really smaller (but full rank again),
- // we can achieve the same effect by multiplying the embedded Hessian from the left
- // and from the right by the matrix of orthonormal frames.
- // 2) Add a correction involving the Weingarten map.
- //
- // This works, and is easy to implement using the ADOL-C "hessian" driver.
- // However, here we implement a small shortcut. Computing the embedded Hessian and
- // multiplying one side by the orthonormal frame is the same as evaluating the Hessian
- // (seen as an operator from R^n to R^n) in the directions of the vectors of the
- // orthonormal frame. By luck, ADOL-C can compute the evaluations of the Hessian in
- // a given direction directly (in fact, this is also how the "hessian" driver works).
- // Since there are less frame vectors than the dimension of the embedding space,
- // this reinterpretation allows to reduce the number of calls to ADOL-C.
- // In my Cosserat shell tests this reduced assembly time by about 10%.
-
- std::vector<Dune::FieldMatrix<RT,blocksize0,embeddedBlocksize0> > orthonormalFrame0(nDofs0);
-
- for (size_t i=0; i<nDofs0; i++)
- orthonormalFrame0[i] = localConfiguration0[i].orthonormalFrame();
-
- std::vector<Dune::FieldMatrix<RT,blocksize1,embeddedBlocksize1> > orthonormalFrame1(nDofs1);
-
- for (size_t i=0; i<nDofs1; i++)
- orthonormalFrame1[i] = localConfiguration1[i].orthonormalFrame();
-
- Dune::Matrix<Dune::FieldMatrix<double,blocksize0, embeddedBlocksize0> > embeddedHessian00(nDofs0,nDofs0);
- Dune::Matrix<Dune::FieldMatrix<double,blocksize0, embeddedBlocksize1> > embeddedHessian01(nDofs0,nDofs1);
- Dune::Matrix<Dune::FieldMatrix<double,blocksize1, embeddedBlocksize0> > embeddedHessian10(nDofs1,nDofs0);
- Dune::Matrix<Dune::FieldMatrix<double,blocksize1, embeddedBlocksize1> > embeddedHessian11(nDofs1,nDofs1);
-
- if(adolcScalarMode_) {
- std::vector<double> v(nDoubles);
- std::vector<double> w(nDoubles);
-
- std::fill(v.begin(), v.end(), 0.0);
-
- size_t nDoubles0 = nDofs0*embeddedBlocksize0; // nDoubles = nDoubles0 + nDoubles1
- size_t nDoubles1 = nDofs1*embeddedBlocksize1;
-
- std::fill(v.begin(), v.end(), 0.0);
-
- for (size_t i=0; i<nDofs0 + nDofs1; i++) {
-
- // Evaluate Hessian in the direction of each vector of the orthonormal frame
- if (i < nDofs0) { //Upper half
- auto i0 = i;
- for (int ii0=0; ii0<blocksize0; ii0++) {
- for (size_t k0=0; k0<embeddedBlocksize0; k0++) {
- v[i0*embeddedBlocksize0 + k0] = orthonormalFrame0[i0][ii0][k0];
- }
- int rc= 3;
- MINDEC(rc, hess_vec(rank, nDoubles, xp.data(), v.data(), w.data()));
- if (rc < 0)
- DUNE_THROW(Dune::Exception, "ADOL-C has returned with error code " << rc << "!");
-
- for (size_t j0=0; j0<nDoubles0; j0++) //Upper left
- embeddedHessian00[i0][j0/embeddedBlocksize0][ii0][j0%embeddedBlocksize0] = w[j0];
-
- for (size_t j1=0; j1<nDoubles1; j1++) //Upper right
- embeddedHessian01[i0][j1/embeddedBlocksize1][ii0][j1%embeddedBlocksize1] = w[nDoubles0 + j1];
-
- // Make v the null vector again
- std::fill(&v[i0*embeddedBlocksize0], &v[(i0+1)*embeddedBlocksize0], 0.0);
- }
- } else { // i = nDofs0 ... nDofs0 + nDofs1 //lower half
- auto i1 = i - nDofs0;
- for (int ii1=0; ii1<blocksize1; ii1++) {
- for (size_t k1=0; k1<embeddedBlocksize1; k1++) {
- v[nDoubles0 + i1*embeddedBlocksize1 + k1] = orthonormalFrame1[i1][ii1][k1];
- }
- int rc= 3;
- MINDEC(rc, hess_vec(rank, nDoubles, xp.data(), v.data(), w.data()));
- if (rc < 0)
- DUNE_THROW(Dune::Exception, "ADOL-C has returned with error code " << rc << "!");
-
- for (size_t j0=0; j0<nDoubles0; j0++) //Uppper left
- embeddedHessian10[i1][j0/embeddedBlocksize0][ii1][j0%embeddedBlocksize0] = w[j0];
-
- for (size_t j1=0; j1<nDoubles1; j1++) //Upper right
- embeddedHessian11[i1][j1/embeddedBlocksize1][ii1][j1%embeddedBlocksize1] = w[nDoubles0 + j1];
-
- // Make v the null vector again
- std::fill(&v[nDoubles0 + i1*embeddedBlocksize1], &v[nDoubles0 + (i1+1)*embeddedBlocksize1], 0.0);
- }
- }
+ // Express gradient in local coordinate system
+ localConfiguration1[i].orthonormalFrame().mv(localEmbeddedGradient1[i],localGradient1[i]);
+ }
+
+ /////////////////////////////////////////////////////////////////
+ // Compute Hessian
+ /////////////////////////////////////////////////////////////////
+
+ // We compute the Hessian of the energy functional using the ADOL-C system.
+ // Since ADOL-C does not know about nonlinear spaces, what we get is actually
+ // the Hessian of a prolongation of the energy functional into the surrounding
+ // Euclidean space. To obtain the Riemannian Hessian from this we apply the
+ // formula described in Absil, Mahoney, Trumpf, "An extrinsic look at the Riemannian Hessian".
+ // This formula consists of two steps:
+ // 1) Remove all entries of the Hessian pertaining to the normal space of the
+ // manifold. In the aforementioned paper this is done by projection onto the
+ // tangent space. Since we want a matrix that is really smaller (but full rank again),
+ // we can achieve the same effect by multiplying the embedded Hessian from the left
+ // and from the right by the matrix of orthonormal frames.
+ // 2) Add a correction involving the Weingarten map.
+ //
+ // This works, and is easy to implement using the ADOL-C "hessian" driver.
+ // However, here we implement a small shortcut. Computing the embedded Hessian and
+ // multiplying one side by the orthonormal frame is the same as evaluating the Hessian
+ // (seen as an operator from R^n to R^n) in the directions of the vectors of the
+ // orthonormal frame. By luck, ADOL-C can compute the evaluations of the Hessian in
+ // a given direction directly (in fact, this is also how the "hessian" driver works).
+ // Since there are less frame vectors than the dimension of the embedding space,
+ // this reinterpretation allows to reduce the number of calls to ADOL-C.
+ // In my Cosserat shell tests this reduced assembly time by about 10%.
+
+ std::vector<Dune::FieldMatrix<RT,blocksize0,embeddedBlocksize0> > orthonormalFrame0(nDofs0);
+
+ for (size_t i=0; i<nDofs0; i++)
+ orthonormalFrame0[i] = localConfiguration0[i].orthonormalFrame();
+
+ std::vector<Dune::FieldMatrix<RT,blocksize1,embeddedBlocksize1> > orthonormalFrame1(nDofs1);
+
+ for (size_t i=0; i<nDofs1; i++)
+ orthonormalFrame1[i] = localConfiguration1[i].orthonormalFrame();
+
+ Dune::Matrix<Dune::FieldMatrix<double,blocksize0, embeddedBlocksize0> > embeddedHessian00(nDofs0,nDofs0);
+ Dune::Matrix<Dune::FieldMatrix<double,blocksize0, embeddedBlocksize1> > embeddedHessian01(nDofs0,nDofs1);
+ Dune::Matrix<Dune::FieldMatrix<double,blocksize1, embeddedBlocksize0> > embeddedHessian10(nDofs1,nDofs0);
+ Dune::Matrix<Dune::FieldMatrix<double,blocksize1, embeddedBlocksize1> > embeddedHessian11(nDofs1,nDofs1);
+
+ if(adolcScalarMode_) {
+ std::vector<double> v(nDoubles);
+ std::vector<double> w(nDoubles);
+
+ std::fill(v.begin(), v.end(), 0.0);
+
+ size_t nDoubles0 = nDofs0*embeddedBlocksize0; // nDoubles = nDoubles0 + nDoubles1
+ size_t nDoubles1 = nDofs1*embeddedBlocksize1;
+
+ std::fill(v.begin(), v.end(), 0.0);
+
+ for (size_t i=0; i<nDofs0 + nDofs1; i++) {
+
+ // Evaluate Hessian in the direction of each vector of the orthonormal frame
+ if (i < nDofs0) { //Upper half
+ auto i0 = i;
+ for (int ii0=0; ii0<blocksize0; ii0++) {
+ for (size_t k0=0; k0<embeddedBlocksize0; k0++) {
+ v[i0*embeddedBlocksize0 + k0] = orthonormalFrame0[i0][ii0][k0];
+ }
+ int rc= 3;
+ MINDEC(rc, hess_vec(rank, nDoubles, xp.data(), v.data(), w.data()));
+ if (rc < 0)
+ DUNE_THROW(Dune::Exception, "ADOL-C has returned with error code " << rc << "!");
+
+ for (size_t j0=0; j0<nDoubles0; j0++) //Upper left
+ embeddedHessian00[i0][j0/embeddedBlocksize0][ii0][j0%embeddedBlocksize0] = w[j0];
+
+ for (size_t j1=0; j1<nDoubles1; j1++) //Upper right
+ embeddedHessian01[i0][j1/embeddedBlocksize1][ii0][j1%embeddedBlocksize1] = w[nDoubles0 + j1];
+
+ // Make v the null vector again
+ std::fill(&v[i0*embeddedBlocksize0], &v[(i0+1)*embeddedBlocksize0], 0.0);
}
-
- } else { //ADOL-C vector mode}
- int n = nDoubles;
- int nDirections = nDofs0 * blocksize0 + nDofs1 * blocksize1;
- double* tangent[nDoubles];
- for(size_t i=0; i<nDoubles; i++)
- tangent[i] = (double*)malloc(nDirections*sizeof(double));
-
- double* rawHessian[nDoubles];
- for(size_t i=0; i<nDoubles; i++)
- rawHessian[i] = (double*)malloc(nDirections*sizeof(double));
-
- // Initialize directions field with zeros
- for (int j=0; j<nDirections; j++)
- for (int i=0; i<n; i++)
- tangent[i][j] = 0.0;
-
- for (size_t j=0; j<nDofs0*blocksize0; j++)
- for (int i=0; i<embeddedBlocksize0; i++)
- tangent[(j/blocksize0)*embeddedBlocksize0+i][j] = orthonormalFrame0[j/blocksize0][j%blocksize0][i];
-
- for (size_t j=0; j<nDofs1*blocksize1; j++)
- for (int i=0; i<embeddedBlocksize1; i++)
- tangent[nDofs0*embeddedBlocksize0 + (j/blocksize1)*embeddedBlocksize1+i][nDofs0*blocksize0 + j] = orthonormalFrame1[j/blocksize1][j%blocksize1][i];
-
- hess_mat(rank,nDoubles,nDirections,xp.data(),tangent,rawHessian);
-
- // Copy Hessian into Dune data type
- size_t offset0 = nDofs0*embeddedBlocksize0;
- size_t offset1 = nDofs0*blocksize0;
-
- // upper left block
- for(size_t i=0; i<nDofs0*embeddedBlocksize0; i++)
- for (size_t j=0; j<nDofs0*blocksize0; j++)
- embeddedHessian00[j/blocksize0][i/embeddedBlocksize0][j%blocksize0][i%embeddedBlocksize0] = rawHessian[i][j];
-
- // upper right block
- for(size_t i=0; i<nDofs1*embeddedBlocksize1; i++)
- for (size_t j=0; j<nDofs0*blocksize0; j++)
- embeddedHessian01[j/blocksize0][i/embeddedBlocksize1][j%blocksize0][i%embeddedBlocksize1] = rawHessian[offset0+i][j];
-
- // lower left block
- for(size_t i=0; i<nDofs0*embeddedBlocksize0; i++)
- for (size_t j=0; j<nDofs1*blocksize1; j++)
- embeddedHessian10[j/blocksize1][i/embeddedBlocksize0][j%blocksize1][i%embeddedBlocksize0] = rawHessian[i][offset1+j];
-
- // lower right block
- for(size_t i=0; i<nDofs1*embeddedBlocksize1; i++)
- for (size_t j=0; j<nDofs1*blocksize1; j++)
- embeddedHessian11[j/blocksize1][i/embeddedBlocksize1][j%blocksize1][i%embeddedBlocksize1] = rawHessian[offset0+i][offset1+j];
-
- for(size_t i=0; i<nDoubles; i++) {
- free(rawHessian[i]);
- free(tangent[i]);
+ } else { // i = nDofs0 ... nDofs0 + nDofs1 //lower half
+ auto i1 = i - nDofs0;
+ for (int ii1=0; ii1<blocksize1; ii1++) {
+ for (size_t k1=0; k1<embeddedBlocksize1; k1++) {
+ v[nDoubles0 + i1*embeddedBlocksize1 + k1] = orthonormalFrame1[i1][ii1][k1];
+ }
+ int rc= 3;
+ MINDEC(rc, hess_vec(rank, nDoubles, xp.data(), v.data(), w.data()));
+ if (rc < 0)
+ DUNE_THROW(Dune::Exception, "ADOL-C has returned with error code " << rc << "!");
+
+ for (size_t j0=0; j0<nDoubles0; j0++) //Uppper left
+ embeddedHessian10[i1][j0/embeddedBlocksize0][ii1][j0%embeddedBlocksize0] = w[j0];
+
+ for (size_t j1=0; j1<nDoubles1; j1++) //Upper right
+ embeddedHessian11[i1][j1/embeddedBlocksize1][ii1][j1%embeddedBlocksize1] = w[nDoubles0 + j1];
+
+ // Make v the null vector again
+ std::fill(&v[nDoubles0 + i1*embeddedBlocksize1], &v[nDoubles0 + (i1+1)*embeddedBlocksize1], 0.0);
}
+ }
}
- // From this, compute the Hessian with respect to the manifold (which we assume here is embedded
- // isometrically in a Euclidean space.
- // For the detailed explanation of the following see: Absil, Mahoney, Trumpf, "An extrinsic look
- // at the Riemannian Hessian".
+ } else { //ADOL-C vector mode}
+ int n = nDoubles;
+ int nDirections = nDofs0 * blocksize0 + nDofs1 * blocksize1;
+ double* tangent[nDoubles];
+ for(size_t i=0; i<nDoubles; i++)
+ tangent[i] = (double*)malloc(nDirections*sizeof(double));
+
+ double* rawHessian[nDoubles];
+ for(size_t i=0; i<nDoubles; i++)
+ rawHessian[i] = (double*)malloc(nDirections*sizeof(double));
+
+ // Initialize directions field with zeros
+ for (int j=0; j<nDirections; j++)
+ for (int i=0; i<n; i++)
+ tangent[i][j] = 0.0;
+
+ for (size_t j=0; j<nDofs0*blocksize0; j++)
+ for (int i=0; i<embeddedBlocksize0; i++)
+ tangent[(j/blocksize0)*embeddedBlocksize0+i][j] = orthonormalFrame0[j/blocksize0][j%blocksize0][i];
+
+ for (size_t j=0; j<nDofs1*blocksize1; j++)
+ for (int i=0; i<embeddedBlocksize1; i++)
+ tangent[nDofs0*embeddedBlocksize0 + (j/blocksize1)*embeddedBlocksize1+i][nDofs0*blocksize0 + j] = orthonormalFrame1[j/blocksize1][j%blocksize1][i];
+
+ hess_mat(rank,nDoubles,nDirections,xp.data(),tangent,rawHessian);
+
+ // Copy Hessian into Dune data type
+ size_t offset0 = nDofs0*embeddedBlocksize0;
+ size_t offset1 = nDofs0*blocksize0;
+
+ // upper left block
+ for(size_t i=0; i<nDofs0*embeddedBlocksize0; i++)
+ for (size_t j=0; j<nDofs0*blocksize0; j++)
+ embeddedHessian00[j/blocksize0][i/embeddedBlocksize0][j%blocksize0][i%embeddedBlocksize0] = rawHessian[i][j];
+
+ // upper right block
+ for(size_t i=0; i<nDofs1*embeddedBlocksize1; i++)
+ for (size_t j=0; j<nDofs0*blocksize0; j++)
+ embeddedHessian01[j/blocksize0][i/embeddedBlocksize1][j%blocksize0][i%embeddedBlocksize1] = rawHessian[offset0+i][j];
+
+ // lower left block
+ for(size_t i=0; i<nDofs0*embeddedBlocksize0; i++)
+ for (size_t j=0; j<nDofs1*blocksize1; j++)
+ embeddedHessian10[j/blocksize1][i/embeddedBlocksize0][j%blocksize1][i%embeddedBlocksize0] = rawHessian[i][offset1+j];
+
+ // lower right block
+ for(size_t i=0; i<nDofs1*embeddedBlocksize1; i++)
+ for (size_t j=0; j<nDofs1*blocksize1; j++)
+ embeddedHessian11[j/blocksize1][i/embeddedBlocksize1][j%blocksize1][i%embeddedBlocksize1] = rawHessian[offset0+i][offset1+j];
+
+ for(size_t i=0; i<nDoubles; i++) {
+ free(rawHessian[i]);
+ free(tangent[i]);
+ }
+ }
- this->A00_.setSize(nDofs0,nDofs0);
+ // From this, compute the Hessian with respect to the manifold (which we assume here is embedded
+ // isometrically in a Euclidean space.
+ // For the detailed explanation of the following see: Absil, Mahoney, Trumpf, "An extrinsic look
+ // at the Riemannian Hessian".
- for (size_t col=0; col<nDofs0; col++) {
+ this->A00_.setSize(nDofs0,nDofs0);
- for (size_t subCol=0; subCol<blocksize0; subCol++) {
+ for (size_t col=0; col<nDofs0; col++) {
- typename TargetSpace0::EmbeddedTangentVector z = orthonormalFrame0[col][subCol];
+ for (size_t subCol=0; subCol<blocksize0; subCol++) {
- // P_x \partial^2 f z
- for (size_t row=0; row<nDofs0; row++) {
- typename TargetSpace0::TangentVector semiEmbeddedProduct;
- embeddedHessian00[row][col].mv(z,semiEmbeddedProduct);
+ typename TargetSpace0::EmbeddedTangentVector z = orthonormalFrame0[col][subCol];
- for (int subRow=0; subRow<blocksize0; subRow++)
- this->A00_[row][col][subRow][subCol] = semiEmbeddedProduct[subRow];
- }
+ // P_x \partial^2 f z
+ for (size_t row=0; row<nDofs0; row++) {
+ typename TargetSpace0::TangentVector semiEmbeddedProduct;
+ embeddedHessian00[row][col].mv(z,semiEmbeddedProduct);
- }
+ for (int subRow=0; subRow<blocksize0; subRow++)
+ this->A00_[row][col][subRow][subCol] = semiEmbeddedProduct[subRow];
+ }
}
- this->A01_.setSize(nDofs0,nDofs1);
+ }
- for (size_t col=0; col<nDofs1; col++) {
+ this->A01_.setSize(nDofs0,nDofs1);
- for (size_t subCol=0; subCol<blocksize1; subCol++) {
+ for (size_t col=0; col<nDofs1; col++) {
- typename TargetSpace1::EmbeddedTangentVector z = orthonormalFrame1[col][subCol];
+ for (size_t subCol=0; subCol<blocksize1; subCol++) {
- // P_x \partial^2 f z
- for (size_t row=0; row<nDofs0; row++) {
- typename TargetSpace0::TangentVector semiEmbeddedProduct;
- embeddedHessian01[row][col].mv(z,semiEmbeddedProduct);
+ typename TargetSpace1::EmbeddedTangentVector z = orthonormalFrame1[col][subCol];
- for (int subRow=0; subRow<blocksize0; subRow++)
- this->A01_[row][col][subRow][subCol] = semiEmbeddedProduct[subRow];
- }
+ // P_x \partial^2 f z
+ for (size_t row=0; row<nDofs0; row++) {
+ typename TargetSpace0::TangentVector semiEmbeddedProduct;
+ embeddedHessian01[row][col].mv(z,semiEmbeddedProduct);
- }
+ for (int subRow=0; subRow<blocksize0; subRow++)
+ this->A01_[row][col][subRow][subCol] = semiEmbeddedProduct[subRow];
+ }
}
- this->A10_.setSize(nDofs1,nDofs0);
+ }
- for (size_t col=0; col<nDofs0; col++) {
+ this->A10_.setSize(nDofs1,nDofs0);
- for (size_t subCol=0; subCol<blocksize0; subCol++) {
+ for (size_t col=0; col<nDofs0; col++) {
- typename TargetSpace0::EmbeddedTangentVector z = orthonormalFrame0[col][subCol];
+ for (size_t subCol=0; subCol<blocksize0; subCol++) {
- // P_x \partial^2 f z
- for (size_t row=0; row<nDofs1; row++) {
- typename TargetSpace1::TangentVector semiEmbeddedProduct;
- embeddedHessian10[row][col].mv(z,semiEmbeddedProduct);
+ typename TargetSpace0::EmbeddedTangentVector z = orthonormalFrame0[col][subCol];
- for (int subRow=0; subRow<blocksize1; subRow++)
- this->A10_[row][col][subRow][subCol] = semiEmbeddedProduct[subRow];
- }
+ // P_x \partial^2 f z
+ for (size_t row=0; row<nDofs1; row++) {
+ typename TargetSpace1::TangentVector semiEmbeddedProduct;
+ embeddedHessian10[row][col].mv(z,semiEmbeddedProduct);
- }
+ for (int subRow=0; subRow<blocksize1; subRow++)
+ this->A10_[row][col][subRow][subCol] = semiEmbeddedProduct[subRow];
+ }
}
- this->A11_.setSize(nDofs1,nDofs1);
+ }
- for (size_t col=0; col<nDofs1; col++) {
+ this->A11_.setSize(nDofs1,nDofs1);
- for (size_t subCol=0; subCol<blocksize1; subCol++) {
+ for (size_t col=0; col<nDofs1; col++) {
- typename TargetSpace1::EmbeddedTangentVector z = orthonormalFrame1[col][subCol];
+ for (size_t subCol=0; subCol<blocksize1; subCol++) {
- // P_x \partial^2 f z
- for (size_t row=0; row<nDofs1; row++) {
- typename TargetSpace1::TangentVector semiEmbeddedProduct;
- embeddedHessian11[row][col].mv(z,semiEmbeddedProduct);
+ typename TargetSpace1::EmbeddedTangentVector z = orthonormalFrame1[col][subCol];
- for (int subRow=0; subRow<blocksize1; subRow++)
- this->A11_[row][col][subRow][subCol] = semiEmbeddedProduct[subRow];
- }
+ // P_x \partial^2 f z
+ for (size_t row=0; row<nDofs1; row++) {
+ typename TargetSpace1::TangentVector semiEmbeddedProduct;
+ embeddedHessian11[row][col].mv(z,semiEmbeddedProduct);
- }
+ for (int subRow=0; subRow<blocksize1; subRow++)
+ this->A11_[row][col][subRow][subCol] = semiEmbeddedProduct[subRow];
+ }
}
- //////////////////////////////////////////////////////////////////////////////////////
- // Further correction due to non-planar configuration space
- // + \mathfrak{A}_x(z,P^\orth_x \partial f)
- //////////////////////////////////////////////////////////////////////////////////////
+ }
- // Project embedded gradient onto normal space
- std::vector<typename TargetSpace0::EmbeddedTangentVector> projectedGradient0(nDofs0);
- for (size_t i=0; i<nDofs0; i++)
- projectedGradient0[i] = localConfiguration0[i].projectOntoNormalSpace(localEmbeddedGradient0[i]);
+ //////////////////////////////////////////////////////////////////////////////////////
+ // Further correction due to non-planar configuration space
+ // + \mathfrak{A}_x(z,P^\orth_x \partial f)
+ //////////////////////////////////////////////////////////////////////////////////////
- std::vector<typename TargetSpace1::EmbeddedTangentVector> projectedGradient1(nDofs1);
- for (size_t i=0; i<nDofs1; i++)
- projectedGradient1[i] = localConfiguration1[i].projectOntoNormalSpace(localEmbeddedGradient1[i]);
+ // Project embedded gradient onto normal space
+ std::vector<typename TargetSpace0::EmbeddedTangentVector> projectedGradient0(nDofs0);
+ for (size_t i=0; i<nDofs0; i++)
+ projectedGradient0[i] = localConfiguration0[i].projectOntoNormalSpace(localEmbeddedGradient0[i]);
- // The Weingarten map has only diagonal entries
- for (size_t row=0; row<nDofs0; row++) {
+ std::vector<typename TargetSpace1::EmbeddedTangentVector> projectedGradient1(nDofs1);
+ for (size_t i=0; i<nDofs1; i++)
+ projectedGradient1[i] = localConfiguration1[i].projectOntoNormalSpace(localEmbeddedGradient1[i]);
- for (size_t subRow=0; subRow<blocksize0; subRow++) {
+ // The Weingarten map has only diagonal entries
+ for (size_t row=0; row<nDofs0; row++) {
- typename TargetSpace0::EmbeddedTangentVector z = orthonormalFrame0[row][subRow];
- typename TargetSpace0::EmbeddedTangentVector tmp1 = localConfiguration0[row].weingarten(z,projectedGradient0[row]);
+ for (size_t subRow=0; subRow<blocksize0; subRow++) {
- typename TargetSpace0::TangentVector tmp2;
- orthonormalFrame0[row].mv(tmp1,tmp2);
+ typename TargetSpace0::EmbeddedTangentVector z = orthonormalFrame0[row][subRow];
+ typename TargetSpace0::EmbeddedTangentVector tmp1 = localConfiguration0[row].weingarten(z,projectedGradient0[row]);
- this->A00_[row][row][subRow] += tmp2;
- }
+ typename TargetSpace0::TangentVector tmp2;
+ orthonormalFrame0[row].mv(tmp1,tmp2);
+ this->A00_[row][row][subRow] += tmp2;
}
- for (size_t row=0; row<nDofs1; row++) {
+ }
- for (size_t subRow=0; subRow<blocksize1; subRow++) {
+ for (size_t row=0; row<nDofs1; row++) {
- typename TargetSpace1::EmbeddedTangentVector z = orthonormalFrame1[row][subRow];
- typename TargetSpace1::EmbeddedTangentVector tmp1 = localConfiguration1[row].weingarten(z,projectedGradient1[row]);
+ for (size_t subRow=0; subRow<blocksize1; subRow++) {
- typename TargetSpace1::TangentVector tmp2;
- orthonormalFrame1[row].mv(tmp1,tmp2);
+ typename TargetSpace1::EmbeddedTangentVector z = orthonormalFrame1[row][subRow];
+ typename TargetSpace1::EmbeddedTangentVector tmp1 = localConfiguration1[row].weingarten(z,projectedGradient1[row]);
- this->A11_[row][row][subRow] += tmp2;
- }
+ typename TargetSpace1::TangentVector tmp2;
+ orthonormalFrame1[row].mv(tmp1,tmp2);
+ this->A11_[row][row][subRow] += tmp2;
}
+
+ }
}
#endif
-
diff --git a/dune/gfe/assemblers/nonplanarcosseratshellenergy.hh b/dune/gfe/assemblers/nonplanarcosseratshellenergy.hh
index bd5385d3..fd1a9eb0 100644
--- a/dune/gfe/assemblers/nonplanarcosseratshellenergy.hh
+++ b/dune/gfe/assemblers/nonplanarcosseratshellenergy.hh
@@ -40,8 +40,8 @@ template<class Basis, int dim, class field_type, class StressFreeStateGridFuncti
class NonplanarCosseratShellEnergy
: public Dune::GFE::LocalEnergy<Basis,RigidBodyMotion<field_type,dim> >,
public MixedLocalGeodesicFEStiffness<Basis,
- RealTuple<field_type,dim>,
- Rotation<field_type,dim> >
+ RealTuple<field_type,dim>,
+ Rotation<field_type,dim> >
{
// grid types
typedef typename Basis::GridView GridView;
@@ -65,7 +65,7 @@ public:
const BoundaryPatch<GridView>* neumannBoundary,
const std::function<Dune::FieldVector<double,3>(Dune::FieldVector<double,dimworld>)> neumannFunction,
const std::function<Dune::FieldVector<double,3>(Dune::FieldVector<double,dimworld>)> volumeLoad)
- : stressFreeStateGridFunction_(stressFreeStateGridFunction),
+ : stressFreeStateGridFunction_(stressFreeStateGridFunction),
neumannBoundary_(neumannBoundary),
neumannFunction_(neumannFunction),
volumeLoad_(volumeLoad)
@@ -87,7 +87,7 @@ public:
b1_ = parameters.template get<double>("b1");
b2_ = parameters.template get<double>("b2");
b3_ = parameters.template get<double>("b3");
-
+
// Indicator to use the alternative energy W_Coss from Birsan 2021:
useAlternativeEnergyWCoss_ = parameters.template get<bool>("useAlternativeEnergyWCoss", false);
}
@@ -96,7 +96,7 @@ public:
RT energy (const typename Basis::LocalView& localView,
const std::vector<TargetSpace>& localSolution) const;
-/** \brief Assemble the energy for a single element */
+ /** \brief Assemble the energy for a single element */
RT energy (const typename Basis::LocalView& localView,
const std::vector<RealTuple<field_type,dim> >& localDisplacementConfiguration,
const std::vector<Rotation<field_type,dim> >& localOrientationConfiguration) const override;
@@ -104,7 +104,7 @@ public:
/* Sources:
Birsan 2019: Derivation of a refined six-parameter shell model, equation (111)
Birsan 2021: Alternative derivation of the higher-order constitudtive model for six-parameter elastic shells, equations (119) and (126)
- */
+ */
RT W_Coss(const Dune::FieldMatrix<field_type,3,3>& S, const Dune::FieldMatrix<double,3,3>& a, const Dune::FieldVector<double,3>& n0) const
{
return W_Coss_mixt(S,S,a,n0);
@@ -129,8 +129,8 @@ public:
RT W_mixt(const Dune::FieldMatrix<field_type,3,3>& S, const Dune::FieldMatrix<field_type,3,3>& T) const
{
return mu_ * Dune::GFE::frobeniusProduct(Dune::GFE::sym(S), Dune::GFE::sym(T))
- + mu_c_ * Dune::GFE::frobeniusProduct(Dune::GFE::skew(S), Dune::GFE::skew(T))
- + lambda_ * mu_ / (lambda_ + 2*mu_) * Dune::GFE::trace(S) * Dune::GFE::trace(T);
+ + mu_c_ * Dune::GFE::frobeniusProduct(Dune::GFE::skew(S), Dune::GFE::skew(T))
+ + lambda_ * mu_ / (lambda_ + 2*mu_) * Dune::GFE::trace(S) * Dune::GFE::trace(T);
}
RT W_mp(const Dune::FieldMatrix<field_type,3,3>& S) const
@@ -142,7 +142,7 @@ public:
RT W_curv(const Dune::FieldMatrix<field_type,3,3>& S) const
{
return mu_ * L_c_ * L_c_ * (b1_ * Dune::GFE::dev(Dune::GFE::sym(S)).frobenius_norm2()
- + b2_ * Dune::GFE::skew(S).frobenius_norm2() + b3_ * Dune::GFE::traceSquared(S));
+ + b2_ * Dune::GFE::skew(S).frobenius_norm2() + b3_ * Dune::GFE::traceSquared(S));
}
#if HAVE_DUNE_GMSH4
@@ -208,11 +208,11 @@ energy(const typename Basis::LocalView& localView,
// Construct a curved geometry of this element of the Cosserat shell in its stress-free state
// The variable local holds the local coordinates in the reference element
// and localGeometry.global maps them to the world coordinates
- Dune::CurvedGeometry<DT, gridDim, dimworld, Dune::CurvedGeometryTraits<DT, Dune::LagrangeLFECache<DT,DT,gridDim>>> geometry(referenceElement(element),
- [this,element](const auto& local) {
- auto localGridFunction = localFunction(*stressFreeStateGridFunction_);
- localGridFunction.bind(element);
- return localGridFunction(local);
+ Dune::CurvedGeometry<DT, gridDim, dimworld, Dune::CurvedGeometryTraits<DT, Dune::LagrangeLFECache<DT,DT,gridDim> > > geometry(referenceElement(element),
+ [this,element](const auto& local) {
+ auto localGridFunction = localFunction(*stressFreeStateGridFunction_);
+ localGridFunction.bind(element);
+ return localGridFunction(local);
}, getOrder(stressFreeStateGridFunction_));
#else
// When using element.geometry(), the geometry of the element is flat
@@ -313,7 +313,7 @@ energy(const typename Basis::LocalView& localView,
for (int j = 0; j < dimworld; j++)
b[i][j] = grad_s_n[i][j];
#endif
-
+
// Mean curvatue
auto H = 0.5 * Dune::GFE::trace(b);
@@ -359,20 +359,20 @@ energy(const typename Basis::LocalView& localView,
field_type energyDensity = 0;
if (useAlternativeEnergyWCoss_) {
energyDensity += (thickness_ - K*Dune::power(thickness_,3) / 12.0) * W_Coss(Ee, a, aContravariant[2])
- + (Dune::power(thickness_,3) / 12.0 - K * Dune::power(thickness_,5) / 80.0)*W_Coss(Ee*b + c*Ke, a, aContravariant[2])
- + Dune::power(thickness_,3) / 6.0 * W_Coss_mixt(Ee, c*Ke*b - 2*H*c*Ke, a, aContravariant[2])
- + Dune::power(thickness_,5) / 80.0 * W_Coss( (Ee*b + c*Ke)*b, a, aContravariant[2]);
+ + (Dune::power(thickness_,3) / 12.0 - K * Dune::power(thickness_,5) / 80.0)*W_Coss(Ee*b + c*Ke, a, aContravariant[2])
+ + Dune::power(thickness_,3) / 6.0 * W_Coss_mixt(Ee, c*Ke*b - 2*H*c*Ke, a, aContravariant[2])
+ + Dune::power(thickness_,5) / 80.0 * W_Coss( (Ee*b + c*Ke)*b, a, aContravariant[2]);
} else {
energyDensity += (thickness_ - K*Dune::power(thickness_,3) / 12.0) * W_m(Ee)
- + (Dune::power(thickness_,3) / 12.0 - K * Dune::power(thickness_,5) / 80.0)*W_m(Ee*b + c*Ke)
- + Dune::power(thickness_,3) / 6.0 * W_mixt(Ee, c*Ke*b - 2*H*c*Ke)
- + Dune::power(thickness_,5) / 80.0 * W_mp( (Ee*b + c*Ke)*b);
+ + (Dune::power(thickness_,3) / 12.0 - K * Dune::power(thickness_,5) / 80.0)*W_m(Ee*b + c*Ke)
+ + Dune::power(thickness_,3) / 6.0 * W_mixt(Ee, c*Ke*b - 2*H*c*Ke)
+ + Dune::power(thickness_,5) / 80.0 * W_mp( (Ee*b + c*Ke)*b);
}
// Add the bending energy density
energyDensity += (thickness_ - K*Dune::power(thickness_,3) / 12.0) * W_curv(Ke)
- + (Dune::power(thickness_,3) / 12.0 - K * Dune::power(thickness_,5) / 80.0)*W_curv(Ke*b)
- + Dune::power(thickness_,5) / 80.0 * W_curv(Ke*b*b);
+ + (Dune::power(thickness_,3) / 12.0 - K * Dune::power(thickness_,5) / 80.0)*W_curv(Ke*b)
+ + Dune::power(thickness_,5) / 80.0 * W_curv(Ke*b*b);
// Add energy density
energy += quad[pt].weight() * integrationElement * energyDensity;
@@ -449,11 +449,11 @@ energy(const typename Basis::LocalView& localView,
// Construct a curved geometry of this element of the Cosserat shell in its stress-free state
// The variable local holds the local coordinates in the reference element
// and localGeometry.global maps them to the world coordinates
- Dune::CurvedGeometry<DT, gridDim, dimworld, Dune::CurvedGeometryTraits<DT, Dune::LagrangeLFECache<DT,DT,gridDim>>> geometry(referenceElement(element),
- [this,element](const auto& local) {
- auto localGridFunction = localFunction(*stressFreeStateGridFunction_);
- localGridFunction.bind(element);
- return localGridFunction(local);
+ Dune::CurvedGeometry<DT, gridDim, dimworld, Dune::CurvedGeometryTraits<DT, Dune::LagrangeLFECache<DT,DT,gridDim> > > geometry(referenceElement(element),
+ [this,element](const auto& local) {
+ auto localGridFunction = localFunction(*stressFreeStateGridFunction_);
+ localGridFunction.bind(element);
+ return localGridFunction(local);
}, getOrder(stressFreeStateGridFunction_));
#else
// When using element.geometry(), the geometry of the element is flat
@@ -558,7 +558,7 @@ energy(const typename Basis::LocalView& localView,
b[i][j] = grad_s_n[i][j];
#endif
b *= (-1);
-
+
// Mean curvatue
auto H = 0.5 * Dune::GFE::trace(b);
@@ -604,19 +604,19 @@ energy(const typename Basis::LocalView& localView,
field_type energyDensity = 0;
if (useAlternativeEnergyWCoss_) {
energyDensity += (thickness_ - K*Dune::power(thickness_,3) / 12.0) * W_Coss(Ee, a, aContravariant[2])
- + (Dune::power(thickness_,3) / 12.0 - K * Dune::power(thickness_,5) / 80.0)*W_Coss(Ee*b + c*Ke, a, aContravariant[2])
- + Dune::power(thickness_,3) / 6.0 * W_Coss_mixt(Ee, c*Ke*b - 2*H*c*Ke, a, aContravariant[2])
- + Dune::power(thickness_,5) / 80.0 * W_Coss( (Ee*b + c*Ke)*b, a, aContravariant[2]);
+ + (Dune::power(thickness_,3) / 12.0 - K * Dune::power(thickness_,5) / 80.0)*W_Coss(Ee*b + c*Ke, a, aContravariant[2])
+ + Dune::power(thickness_,3) / 6.0 * W_Coss_mixt(Ee, c*Ke*b - 2*H*c*Ke, a, aContravariant[2])
+ + Dune::power(thickness_,5) / 80.0 * W_Coss( (Ee*b + c*Ke)*b, a, aContravariant[2]);
} else {
energyDensity += (thickness_ - K*Dune::power(thickness_,3) / 12.0) * W_m(Ee)
- + (Dune::power(thickness_,3) / 12.0 - K * Dune::power(thickness_,5) / 80.0)*W_m(Ee*b + c*Ke)
- + Dune::power(thickness_,3) / 6.0 * W_mixt(Ee, c*Ke*b - 2*H*c*Ke)
- + Dune::power(thickness_,5) / 80.0 * W_mp( (Ee*b + c*Ke)*b);
+ + (Dune::power(thickness_,3) / 12.0 - K * Dune::power(thickness_,5) / 80.0)*W_m(Ee*b + c*Ke)
+ + Dune::power(thickness_,3) / 6.0 * W_mixt(Ee, c*Ke*b - 2*H*c*Ke)
+ + Dune::power(thickness_,5) / 80.0 * W_mp( (Ee*b + c*Ke)*b);
}
energyDensity += (thickness_ - K*Dune::power(thickness_,3) / 12.0) * W_curv(Ke)
- + (Dune::power(thickness_,3) / 12.0 - K * Dune::power(thickness_,5) / 80.0)*W_curv(Ke*b)
- + Dune::power(thickness_,5) / 80.0 * W_curv(Ke*b*b);
+ + (Dune::power(thickness_,3) / 12.0 - K * Dune::power(thickness_,5) / 80.0)*W_curv(Ke*b)
+ + Dune::power(thickness_,5) / 80.0 * W_curv(Ke*b*b);
// Add energy density
energy += quad[pt].weight() * integrationElement * energyDensity;
@@ -674,4 +674,3 @@ energy(const typename Basis::LocalView& localView,
}
#endif //#ifndef DUNE_GFE_NONPLANARCOSSERATSHELLENERGY_HH
-
diff --git a/dune/gfe/assemblers/simofoxenergy.hh b/dune/gfe/assemblers/simofoxenergy.hh
index 80fbcf21..55081aff 100644
--- a/dune/gfe/assemblers/simofoxenergy.hh
+++ b/dune/gfe/assemblers/simofoxenergy.hh
@@ -25,7 +25,7 @@ namespace Dune::GFE {
class LocalFiniteElementFactory {
public:
static auto get(const typename Basis::LocalView &localView, std::integral_constant<std::size_t, i> iType)
- -> decltype(localView.tree().child(iType, 0).finiteElement()) {
+ -> decltype(localView.tree().child(iType, 0).finiteElement()) {
return localView.tree().child(iType, 0).finiteElement();
}
};
@@ -52,10 +52,10 @@ namespace Dune::GFE {
*/
template <class Basis, template <int, typename, typename, typename> typename LocalFEFunction, typename field_type = double>
class SimoFoxEnergyLocalStiffness
- : public Dune::GFE::LocalEnergy<Basis, RealTuple<field_type, 3>,
- UnitVector<field_type, 3>>, // inheritance to allow usage with LocalGeodesicFEADOLCStiffness
- public MixedLocalGeodesicFEStiffness<Basis, RealTuple<field_type, 3>,
- UnitVector<field_type, 3>> // inheritance to allow usage with MixedGFEAssembler
+ : public Dune::GFE::LocalEnergy<Basis, RealTuple<field_type, 3>,
+ UnitVector<field_type, 3> >, // inheritance to allow usage with LocalGeodesicFEADOLCStiffness
+ public MixedLocalGeodesicFEStiffness<Basis, RealTuple<field_type, 3>,
+ UnitVector<field_type, 3> > // inheritance to allow usage with MixedGFEAssembler
{
// grid types
typedef typename Basis::GridView GridView;
@@ -69,19 +69,19 @@ namespace Dune::GFE {
// The local finite element type used for midsurface position and displacement interpolation
using MidSurfaceElement =
- typename std::result_of<decltype (&LocalFiniteElementFactory<Basis, 0>::get)(typename Basis::LocalView, decltype(Dune::Indices::_0))>::type;
+ typename std::result_of<decltype (&LocalFiniteElementFactory<Basis, 0>::get)(typename Basis::LocalView, decltype(Dune::Indices::_0))>::type;
// The local finite element type used for the director interpolation
using DirectorElement =
- typename std::result_of<decltype (&LocalFiniteElementFactory<Basis, 1>::get)(typename Basis::LocalView, decltype(Dune::Indices::_1))>::type;
+ typename std::result_of<decltype (&LocalFiniteElementFactory<Basis, 1>::get)(typename Basis::LocalView, decltype(Dune::Indices::_1))>::type;
// The local finite element function type to evaluate the midsurface position
- using LocalMidSurfaceFunctionType = LocalFEFunction<gridDim, DT, MidSurfaceElement, RealTuple<field_type, 3>>;
+ using LocalMidSurfaceFunctionType = LocalFEFunction<gridDim, DT, MidSurfaceElement, RealTuple<field_type, 3> >;
// The local finite element function type to evaluate the director
- using LocalDirectorFunctionType = LocalFEFunction<gridDim, DT, DirectorElement, UnitVector<field_type, 3>>;
+ using LocalDirectorFunctionType = LocalFEFunction<gridDim, DT, DirectorElement, UnitVector<field_type, 3> >;
// Extra function type for reference quantities since they are unconditionally doubles, i.e. no ADOL-C types
- using LocalMidSurfaceReferenceFunctionType = LocalFEFunction<gridDim, DT, MidSurfaceElement, RealTuple<double, 3>>;
- using LocalDirectorReferenceFunctionType = LocalFEFunction<gridDim, DT, DirectorElement, UnitVector<double, 3>>;
+ using LocalMidSurfaceReferenceFunctionType = LocalFEFunction<gridDim, DT, MidSurfaceElement, RealTuple<double, 3> >;
+ using LocalDirectorReferenceFunctionType = LocalFEFunction<gridDim, DT, DirectorElement, UnitVector<double, 3> >;
public:
/** \brief Constructor with a set of material parameters
@@ -91,15 +91,15 @@ namespace Dune::GFE {
SimoFoxEnergyLocalStiffness(const Dune::ParameterTree ¶meters, const BoundaryPatch<GridView> *neumannBoundary,
const std::function<Dune::FieldVector<double, 3>(Dune::FieldVector<double, 2>)> neumannFunction,
const std::function<Dune::FieldVector<double, 3>(Dune::FieldVector<double, 2>)> volumeLoad,
- const Dune::TupleVector<std::vector<RealTuple<double, 3>>, std::vector<UnitVector<double, 3>>> &x0)
- : neumannBoundary_(neumannBoundary),
- neumannFunction_(neumannFunction),
- thickness_{parameters.template get<double>("thickness")}, // The sheeqll thickness
- mu_{parameters.template get<double>("mu")}, // Lame constant 1
- lambda_{parameters.template get<double>("lambda")}, // Lame constant 2
- kappa_{parameters.template get<double>("kappa")}, // Shear correction factor
- midSurfaceRefConfig{x0[Dune::Indices::_0]},
- directorRefConfig{x0[Dune::Indices::_1]}
+ const Dune::TupleVector<std::vector<RealTuple<double, 3> >, std::vector<UnitVector<double, 3> > > &x0)
+ : neumannBoundary_(neumannBoundary),
+ neumannFunction_(neumannFunction),
+ thickness_{parameters.template get<double>("thickness")}, // The sheeqll thickness
+ mu_{parameters.template get<double>("mu")}, // Lame constant 1
+ lambda_{parameters.template get<double>("lambda")}, // Lame constant 2
+ kappa_{parameters.template get<double>("kappa")}, // Shear correction factor
+ midSurfaceRefConfig{x0[Dune::Indices::_0]},
+ directorRefConfig{x0[Dune::Indices::_1]}
{
// Calculate the over the thickness preintegrated St.Venant Kirchhoff material matrix, Paper equation 10.1 */
const double Emodul = mu_ * (3 * lambda_ + 2 * mu_) / (lambda_ + mu_); // Young's modulus
@@ -123,8 +123,8 @@ namespace Dune::GFE {
}
/** \brief Assemble the energy for a single element */
- RT energy(const typename Basis::LocalView &localView, const std::vector<RealTuple<field_type, 3>> &localMidSurfaceConfiguration,
- const std::vector<UnitVector<field_type, 3>> &localDirectorConfiguration) const override;
+ RT energy(const typename Basis::LocalView &localView, const std::vector<RealTuple<field_type, 3> > &localMidSurfaceConfiguration,
+ const std::vector<UnitVector<field_type, 3> > &localDirectorConfiguration) const override;
private:
/** \brief A structure that contains all quantities to calculate the Lagrangian strains */
@@ -145,7 +145,7 @@ namespace Dune::GFE {
/** \brief Calculates all kinematic quantities */
template <typename Element, typename LocalDirectorFunction, typename LocalMidSurfaceFunction, typename LocalDirectorReferenceFunction,
- typename LocalMidSurfaceReferenceFunction, typename IntegrationPointPosition>
+ typename LocalMidSurfaceReferenceFunction, typename IntegrationPointPosition>
static auto kinematicVariablesFactory(const Element &element, const LocalDirectorFunction &directorFunction,
const LocalDirectorReferenceFunction &directorReferenceFunction,
const LocalMidSurfaceFunction &midSurfaceFunction,
@@ -156,7 +156,7 @@ namespace Dune::GFE {
static Dune::FieldVector<RT, 8> calculateGreenLagrangianStrains(const KinematicVariables &kin);
/** \brief Save all tangent base matrices for all nodes in one place*/
- Dune::BlockVector<Dune::FieldMatrix<field_type, 2, 3>> directorTangentSpaces;
+ Dune::BlockVector<Dune::FieldMatrix<field_type, 2, 3> > directorTangentSpaces;
/** \brief The Neumann boundary */
const BoundaryPatch<GridView> *neumannBoundary_;
@@ -180,8 +180,8 @@ namespace Dune::GFE {
const std::function<Dune::FieldVector<double, 3>(Dune::FieldVector<double, dimworld>)> volumeLoad_;
/** \brief Stores the reference configuration of the midsurface and the director field */
- const std::vector<RealTuple<double, 3>> &midSurfaceRefConfig;
- const std::vector<UnitVector<double, 3>> &directorRefConfig;
+ const std::vector<RealTuple<double, 3> > &midSurfaceRefConfig;
+ const std::vector<UnitVector<double, 3> > &directorRefConfig;
};
/** \brief Calculate the Green-Lagrange strain components for the thickness-integrated setting
@@ -193,7 +193,7 @@ namespace Dune::GFE {
* Paper Equation 4.10 */
template <class Basis, template <int, typename, typename, typename> typename LocalFEFunction, typename field_type>
Dune::FieldVector<field_type, 8> SimoFoxEnergyLocalStiffness<Basis, LocalFEFunction, field_type>::calculateGreenLagrangianStrains(
- const KinematicVariables &kin)
+ const KinematicVariables &kin)
{
Dune::FieldVector<RT, 8> egl;
// membrane
@@ -220,11 +220,11 @@ namespace Dune::GFE {
*/
template <class Basis, template <int, typename, typename, typename> typename LocalFEFunction, typename field_type>
template <typename Element, typename LocalDirectorFunction, typename LocalMidSurfaceFunction, typename LocalDirectorReferenceFunction,
- typename LocalMidSurfaceReferenceFunction, typename IntegrationPointPosition>
+ typename LocalMidSurfaceReferenceFunction, typename IntegrationPointPosition>
auto SimoFoxEnergyLocalStiffness<Basis, LocalFEFunction, field_type>::kinematicVariablesFactory(
- const Element &element, const LocalDirectorFunction &directorFunction, const LocalDirectorReferenceFunction &directorReferenceFunction,
- const LocalMidSurfaceFunction &midSurfaceFunction, const LocalMidSurfaceReferenceFunction &midSurfaceReferenceFunction,
- const LocalMidSurfaceFunction &midSurfaceDisplacementFunction, const IntegrationPointPosition &quadPos)
+ const Element &element, const LocalDirectorFunction &directorFunction, const LocalDirectorReferenceFunction &directorReferenceFunction,
+ const LocalMidSurfaceFunction &midSurfaceFunction, const LocalMidSurfaceReferenceFunction &midSurfaceReferenceFunction,
+ const LocalMidSurfaceFunction &midSurfaceDisplacementFunction, const IntegrationPointPosition &quadPos)
{
KinematicVariables kin{};
@@ -243,13 +243,13 @@ namespace Dune::GFE {
template <class Basis, template <int, typename, typename, typename> typename LocalFEFunction, typename field_type>
auto SimoFoxEnergyLocalStiffness<Basis, LocalFEFunction, field_type>::getReferenceLocalConfigurations(
- const typename Basis::LocalView &localView) const {
+ const typename Basis::LocalView &localView) const {
using namespace Dune::TypeTree::Indices;
const int nDofs0 = localView.tree().child(_0, 0).finiteElement().size();
const int nDofs1 = localView.tree().child(_1, 0).finiteElement().size();
- std::vector<RealTuple<double, 3>> localConfiguration0(nDofs0);
- std::vector<UnitVector<double, 3>> localConfiguration1(nDofs1);
+ std::vector<RealTuple<double, 3> > localConfiguration0(nDofs0);
+ std::vector<UnitVector<double, 3> > localConfiguration1(nDofs1);
for (int i = 0; i < nDofs0 + nDofs1; i++) {
int localIndexI = 0;
@@ -282,8 +282,8 @@ namespace Dune::GFE {
template <class Basis, template <int, typename, typename, typename> typename LocalFEFunction, typename field_type>
typename SimoFoxEnergyLocalStiffness<Basis, LocalFEFunction, field_type>::RT
SimoFoxEnergyLocalStiffness<Basis, LocalFEFunction, field_type>::energy(
- const typename Basis::LocalView &localView, const std::vector<RealTuple<field_type, 3>> &localMidSurfaceConfiguration,
- const std::vector<UnitVector<field_type, 3>> &localDirectorConfiguration) const
+ const typename Basis::LocalView &localView, const std::vector<RealTuple<field_type, 3> > &localMidSurfaceConfiguration,
+ const std::vector<UnitVector<field_type, 3> > &localDirectorConfiguration) const
{
auto element = localView.element();
@@ -293,7 +293,7 @@ namespace Dune::GFE {
const auto [localRefMidSurfaceConfiguration, localRefDirectorConfiguration] = getReferenceLocalConfigurations(localView);
- std::vector<RealTuple<field_type, 3>> displacements;
+ std::vector<RealTuple<field_type, 3> > displacements;
displacements.reserve(localMidSurfaceConfiguration.size());
for (size_t i = 0; i < localMidSurfaceConfiguration.size(); ++i)
displacements.emplace_back(localMidSurfaceConfiguration[i].globalCoordinates() - localRefMidSurfaceConfiguration[i].globalCoordinates());
@@ -314,8 +314,8 @@ namespace Dune::GFE {
const Dune::FieldVector<DT, gridDim> &quadPos = curQuad.position();
const KinematicVariables kin
- = kinematicVariablesFactory(element, localDirectorFunction, localDirectorReferenceFunction, localMidSurfaceFunction,
- localMidSurfaceReferenceFunction, localMidSurfaceDisplacementFunction, quadPos);
+ = kinematicVariablesFactory(element, localDirectorFunction, localDirectorReferenceFunction, localMidSurfaceFunction,
+ localMidSurfaceReferenceFunction, localMidSurfaceDisplacementFunction, quadPos);
const DT integrationElement = element.geometry().integrationElement(quadPos);
const FieldVector<field_type, 8> Egl = calculateGreenLagrangianStrains(kin);
diff --git a/dune/gfe/assemblers/sumenergy.hh b/dune/gfe/assemblers/sumenergy.hh
index a7765747..dd450369 100644
--- a/dune/gfe/assemblers/sumenergy.hh
+++ b/dune/gfe/assemblers/sumenergy.hh
@@ -9,51 +9,51 @@
namespace Dune::GFE {
/**
- \brief Assembles the a sum of energies for a single element by summing up the energies of each GFE::LocalEnergy.
+ \brief Assembles the a sum of energies for a single element by summing up the energies of each GFE::LocalEnergy.
This class works similarly to the class Dune::Elasticity::SumEnergy, where Dune::Elasticity::SumEnergy extends
Dune::Elasticity::LocalEnergy and Dune::GFE::SumEnergy extends Dune::GFE::LocalEnergy.
- */
+ */
-template<class Basis, class... TargetSpaces>
-class SumEnergy
- : public Dune::GFE::LocalEnergy<Basis, TargetSpaces...>,
- public MixedLocalGeodesicFEStiffness<Basis, TargetSpaces...>
- //Inheriting from MixedLocalGeodesicFEStiffness is hack, and will be replaced eventually; once MixedLocalGFEADOLCStiffness
- //will be removed and its functionality will be included in LocalGeodesicFEADOLCStiffness this is not needed anymore!
+ template<class Basis, class ... TargetSpaces>
+ class SumEnergy
+ : public Dune::GFE::LocalEnergy<Basis, TargetSpaces...>,
+ public MixedLocalGeodesicFEStiffness<Basis, TargetSpaces...>
+ //Inheriting from MixedLocalGeodesicFEStiffness is hack, and will be replaced eventually; once MixedLocalGFEADOLCStiffness
+ //will be removed and its functionality will be included in LocalGeodesicFEADOLCStiffness this is not needed anymore!
-{
+ {
- using LocalView = typename Basis::LocalView;
- using GridView = typename LocalView::GridView;
- using DT = typename GridView::Grid::ctype;
- using RT = typename Dune::GFE::LocalEnergy<Basis,TargetSpaces...>::RT;
+ using LocalView = typename Basis::LocalView;
+ using GridView = typename LocalView::GridView;
+ using DT = typename GridView::Grid::ctype;
+ using RT = typename Dune::GFE::LocalEnergy<Basis,TargetSpaces...>::RT;
-public:
-
- /** \brief Default Constructor*/
- SumEnergy()
- {}
+ public:
- void addLocalEnergy(std::shared_ptr<GFE::LocalEnergy<Basis,TargetSpaces...>> localEnergy)
- {
- localEnergies_.push_back(localEnergy);
- }
+ /** \brief Default Constructor*/
+ SumEnergy()
+ {}
- RT energy(const typename Basis::LocalView& localView,
- const std::vector<TargetSpaces>&... localSolution) const
- {
- RT sum = 0.;
- for ( const auto& localEnergy : localEnergies_ )
- sum += localEnergy->energy( localView, localSolution... );
+ void addLocalEnergy(std::shared_ptr<GFE::LocalEnergy<Basis,TargetSpaces...> > localEnergy)
+ {
+ localEnergies_.push_back(localEnergy);
+ }
+
+ RT energy(const typename Basis::LocalView& localView,
+ const std::vector<TargetSpaces>& ... localSolution) const
+ {
+ RT sum = 0.;
+ for ( const auto& localEnergy : localEnergies_ )
+ sum += localEnergy->energy( localView, localSolution ... );
- return sum;
- }
+ return sum;
+ }
-private:
- // vector containing pointers to the local energies
- std::vector<std::shared_ptr<GFE::LocalEnergy<Basis, TargetSpaces...>>> localEnergies_;
-};
+ private:
+ // vector containing pointers to the local energies
+ std::vector<std::shared_ptr<GFE::LocalEnergy<Basis, TargetSpaces...> > > localEnergies_;
+ };
} // namespace Dune::GFE
diff --git a/dune/gfe/assemblers/surfacecosseratenergy.hh b/dune/gfe/assemblers/surfacecosseratenergy.hh
index df21fd02..b5d6c16b 100644
--- a/dune/gfe/assemblers/surfacecosseratenergy.hh
+++ b/dune/gfe/assemblers/surfacecosseratenergy.hh
@@ -19,384 +19,384 @@
#include <dune/localfunctions/lagrange/lfecache.hh>
namespace Dune::GFE {
-/** \brief Assembles the cosserat energy on the given boundary for a single element.
- *
- * \tparam CurvedGeometryGridFunction Type of the grid function that gives the geometry of the deformed surface
- * \tparam Basis Type of the Basis used for assembling
- * \tparam TargetSpaces The List of TargetSpaces - SurfaceCosseratEnergy needs exactly two TargetSpaces!
- */
-template<class CurvedGeometryGridFunction, class Basis, class... TargetSpaces>
-class SurfaceCosseratEnergy
-: public Dune::GFE::LocalEnergy<Basis, TargetSpaces...>
-{
- using GridView = typename Basis::GridView;
- using DT = typename GridView::ctype ;
- using RT = typename Dune::GFE::LocalEnergy<Basis, TargetSpaces...>::RT ;
- using Entity = typename GridView::template Codim<0>::Entity ;
- using RBM0 = RealTuple<RT,GridView::dimensionworld> ;
- using RBM1 = Rotation<RT,GridView::dimensionworld> ;
- using RBM = RigidBodyMotion<RT,GridView::dimensionworld> ;
-
- constexpr static int dimWorld = GridView::dimensionworld;
- constexpr static int gridDim = GridView::dimension;
- static constexpr int boundaryDim = gridDim - 1;
-
- /** \brief Compute the derivative of the rotation (with respect to x), but wrt matrix coordinates
- \param value Value of the gfe function at a certain point
- \param derivative First derivative of the gfe function wrt x at that point, in quaternion coordinates
- \param DR First derivative of the gfe function wrt x at that point, in matrix coordinates
+ /** \brief Assembles the cosserat energy on the given boundary for a single element.
+ *
+ * \tparam CurvedGeometryGridFunction Type of the grid function that gives the geometry of the deformed surface
+ * \tparam Basis Type of the Basis used for assembling
+ * \tparam TargetSpaces The List of TargetSpaces - SurfaceCosseratEnergy needs exactly two TargetSpaces!
*/
- static void computeDR(const RBM& value,
- const Dune::FieldMatrix<RT,RBM::embeddedDim,boundaryDim>& derivative,
- Tensor3<RT,dimWorld,dimWorld,boundaryDim>& derivative_rotation)
+ template<class CurvedGeometryGridFunction, class Basis, class ... TargetSpaces>
+ class SurfaceCosseratEnergy
+ : public Dune::GFE::LocalEnergy<Basis, TargetSpaces...>
{
- // The LocalGFEFunction class gives us the derivatives of the orientation variable,
- // but as a map into quaternion space. To obtain matrix coordinates we use the
- // chain rule, which means that we have to multiply the given derivative with
- // the derivative of the embedding of the unit quaternion into the space of 3x3 matrices.
- // This second derivative is almost given by the method getFirstDerivativesOfDirectors.
- // However, since the directors of a given unit quaternion are the _columns_ of the
- // corresponding orthogonal matrix, we need to invert the i and j indices
- //
- // So, DR[i][j][k] contains \partial R_ij / \partial k
- Tensor3<RT, dimWorld, dimWorld, 4> dd_dq;
- value.q.getFirstDerivativesOfDirectors(dd_dq);
-
- derivative_rotation = RT(0);
- for (int i=0; i<dimWorld; i++)
- for (int j=0; j<dimWorld; j++)
- for (int k=0; k<boundaryDim; k++)
- for (int l=0; l<4; l++)
- derivative_rotation[i][j][k] += dd_dq[j][i][l] * derivative[l+3][k];
- }
-
-
-
-public:
-
- /** \brief Constructor with a set of material parameters
- * \param parameters The material parameters
- * \param shellBoundary The shellBoundary contains the faces where the cosserat energy is assembled
- * \param curvedGeometryGridFunction The curvedGeometryGridFunction gives the geometry of the shell in stress-free state.
- When assembling, we deform the intersections using the curvedGeometryGridFunction and then use the deformed geometries.
- * \param thicknessF The shell thickness parameter, given as a function and evaluated at each quadrature point
- * \param lameF The Lame parameters, given as a function and evaluated at each quadrature point
- */
- SurfaceCosseratEnergy(const Dune::ParameterTree& parameters,
- const BoundaryPatch<GridView>* shellBoundary,
- const CurvedGeometryGridFunction& curvedGeometryGridFunction,
- const std::function<double(Dune::FieldVector<double,dimWorld>)> thicknessF,
- const std::function<Dune::FieldVector<double,2>(Dune::FieldVector<double,dimWorld>)> lameF)
- : shellBoundary_(shellBoundary),
- curvedGeometryGridFunction_(curvedGeometryGridFunction),
- thicknessF_(thicknessF),
- lameF_(lameF)
- {
- // Cosserat couple modulus
- mu_c_ = parameters.template get<double>("mu_c");
-
- // Length scale parameter
- L_c_ = parameters.template get<double>("L_c");
-
- // Curvature parameters
- b1_ = parameters.template get<double>("b1");
- b2_ = parameters.template get<double>("b2");
- b3_ = parameters.template get<double>("b3");
- }
-
-RT energy(const typename Basis::LocalView& localView,
- const std::vector<TargetSpaces>&... localSolutions) const
-{
- static_assert(sizeof...(TargetSpaces) == 2, "SurfaceCosseratEnergy needs exactly two TargetSpaces!");
-
- using namespace Dune::Indices;
- using TargetSpace0 = typename std::tuple_element<0, std::tuple<TargetSpaces...> >::type;
- const std::vector<TargetSpace0>& localSolution0 = std::get<0>(std::forward_as_tuple(localSolutions...));
- using TargetSpace1 = typename std::tuple_element<1, std::tuple<TargetSpaces...> >::type;
- const std::vector<TargetSpace1>& localSolution1 = std::get<1>(std::forward_as_tuple(localSolutions...));
-
- // The element geometry
- auto element = localView.element();
- auto gridView = localView.globalBasis().gridView();
-
- ////////////////////////////////////////////////////////////////////////////////////
- // Set up the local nonlinear finite element function
- ////////////////////////////////////////////////////////////////////////////////////
- using namespace Dune::TypeTree::Indices;
-
- // The set of shape functions on this element
- const auto& deformationLocalFiniteElement = localView.tree().child(_0,0).finiteElement();
- const auto& orientationLocalFiniteElement = localView.tree().child(_1,0).finiteElement();
-
- // to construct a local GFE function, in case they are the shape functions are the same, we can use use one GFE-Function
-#if MIXED_SPACE
- std::vector<RBM0> localSolutionRBM0(localSolution0.size());
- std::vector<RBM1> localSolutionRBM1(localSolution1.size());
- for (int i = 0; i < localSolution0.size(); i++)
- localSolutionRBM0[i] = localSolution0[i];
- for (int i = 0; i< localSolution1.size(); i++)
- localSolutionRBM1[i] = localSolution1[i];
- typedef LocalGeodesicFEFunction<gridDim, DT, decltype(deformationLocalFiniteElement), RBM0> LocalGFEFunctionType0;
- typedef LocalGeodesicFEFunction<gridDim, DT, decltype(orientationLocalFiniteElement), RBM1> LocalGFEFunctionType1;
- LocalGFEFunctionType0 localGeodesicFEFunction0(deformationLocalFiniteElement,localSolutionRBM0);
- LocalGFEFunctionType1 localGeodesicFEFunction1(orientationLocalFiniteElement,localSolutionRBM1);
-#else
- std::vector<RBM> localSolutionRBM(localSolution0.size());
- for (int i = 0; i < localSolution0.size(); i++) {
- for (int j = 0; j < dimWorld; j++)
- localSolutionRBM[i].r[j] = localSolution0[i][j];
- localSolutionRBM[i].q = localSolution1[i];
+ using GridView = typename Basis::GridView;
+ using DT = typename GridView::ctype ;
+ using RT = typename Dune::GFE::LocalEnergy<Basis, TargetSpaces...>::RT ;
+ using Entity = typename GridView::template Codim<0>::Entity ;
+ using RBM0 = RealTuple<RT,GridView::dimensionworld> ;
+ using RBM1 = Rotation<RT,GridView::dimensionworld> ;
+ using RBM = RigidBodyMotion<RT,GridView::dimensionworld> ;
+
+ constexpr static int dimWorld = GridView::dimensionworld;
+ constexpr static int gridDim = GridView::dimension;
+ static constexpr int boundaryDim = gridDim - 1;
+
+ /** \brief Compute the derivative of the rotation (with respect to x), but wrt matrix coordinates
+ \param value Value of the gfe function at a certain point
+ \param derivative First derivative of the gfe function wrt x at that point, in quaternion coordinates
+ \param DR First derivative of the gfe function wrt x at that point, in matrix coordinates
+ */
+ static void computeDR(const RBM& value,
+ const Dune::FieldMatrix<RT,RBM::embeddedDim,boundaryDim>& derivative,
+ Tensor3<RT,dimWorld,dimWorld,boundaryDim>& derivative_rotation)
+ {
+ // The LocalGFEFunction class gives us the derivatives of the orientation variable,
+ // but as a map into quaternion space. To obtain matrix coordinates we use the
+ // chain rule, which means that we have to multiply the given derivative with
+ // the derivative of the embedding of the unit quaternion into the space of 3x3 matrices.
+ // This second derivative is almost given by the method getFirstDerivativesOfDirectors.
+ // However, since the directors of a given unit quaternion are the _columns_ of the
+ // corresponding orthogonal matrix, we need to invert the i and j indices
+ //
+ // So, DR[i][j][k] contains \partial R_ij / \partial k
+ Tensor3<RT, dimWorld, dimWorld, 4> dd_dq;
+ value.q.getFirstDerivativesOfDirectors(dd_dq);
+
+ derivative_rotation = RT(0);
+ for (int i=0; i<dimWorld; i++)
+ for (int j=0; j<dimWorld; j++)
+ for (int k=0; k<boundaryDim; k++)
+ for (int l=0; l<4; l++)
+ derivative_rotation[i][j][k] += dd_dq[j][i][l] * derivative[l+3][k];
}
- typedef LocalGeodesicFEFunction<gridDim, DT, decltype(deformationLocalFiniteElement), RBM> LocalGFEFunctionType;
- LocalGFEFunctionType localGeodesicFEFunction(deformationLocalFiniteElement,localSolutionRBM);
-#endif
- RT energy = 0;
- for (auto&& it : intersections(shellBoundary_->gridView(), element)) {
- if (not shellBoundary_->contains(it))
- continue;
- auto localGridFunction = localFunction(curvedGeometryGridFunction_);
- auto curvedGeometryGridFunctionOrder = deformationLocalFiniteElement.localBasis().order();//curvedGeometryGridFunction_.basis().localView().tree().child(0).finiteElement().localBasis().order();
- localGridFunction.bind(element);
- auto referenceElement = Dune::referenceElement<DT,boundaryDim>(it.type());
-
- // Construct the geometry on the boundary using the map lGF(localGeometry.global(local)):
- // The variable local holds the local coordinates in the 2D reference element, localGeometry.global maps them to the 3D reference element.
- // The function lGF is the gridfunction bound to the current element, so lGF(localGeometry.global(local)) is the value of curvedGeometryGridFunction_ at
- // the point on the intersection face.
- using BoundaryGeometry = Dune::CurvedGeometry<DT, boundaryDim, dimWorld, Dune::CurvedGeometryTraits<DT, Dune::LagrangeLFECache<DT,DT,boundaryDim>>>;
- BoundaryGeometry boundaryGeometry(referenceElement,
- [localGridFunction, localGeometry=it.geometryInInside()](const auto& local) {
- return localGridFunction(localGeometry.global(local));
- }, curvedGeometryGridFunctionOrder);
+ public:
+
+ /** \brief Constructor with a set of material parameters
+ * \param parameters The material parameters
+ * \param shellBoundary The shellBoundary contains the faces where the cosserat energy is assembled
+ * \param curvedGeometryGridFunction The curvedGeometryGridFunction gives the geometry of the shell in stress-free state.
+ When assembling, we deform the intersections using the curvedGeometryGridFunction and then use the deformed geometries.
+ * \param thicknessF The shell thickness parameter, given as a function and evaluated at each quadrature point
+ * \param lameF The Lame parameters, given as a function and evaluated at each quadrature point
+ */
+ SurfaceCosseratEnergy(const Dune::ParameterTree& parameters,
+ const BoundaryPatch<GridView>* shellBoundary,
+ const CurvedGeometryGridFunction& curvedGeometryGridFunction,
+ const std::function<double(Dune::FieldVector<double,dimWorld>)> thicknessF,
+ const std::function<Dune::FieldVector<double,2>(Dune::FieldVector<double,dimWorld>)> lameF)
+ : shellBoundary_(shellBoundary),
+ curvedGeometryGridFunction_(curvedGeometryGridFunction),
+ thicknessF_(thicknessF),
+ lameF_(lameF)
+ {
+ // Cosserat couple modulus
+ mu_c_ = parameters.template get<double>("mu_c");
+
+ // Length scale parameter
+ L_c_ = parameters.template get<double>("L_c");
+
+ // Curvature parameters
+ b1_ = parameters.template get<double>("b1");
+ b2_ = parameters.template get<double>("b2");
+ b3_ = parameters.template get<double>("b3");
+ }
- auto quadOrder = (it.type().isSimplex()) ? deformationLocalFiniteElement.localBasis().order()
- : deformationLocalFiniteElement.localBasis().order() * boundaryDim;
+ RT energy(const typename Basis::LocalView& localView,
+ const std::vector<TargetSpaces>& ... localSolutions) const
+ {
+ static_assert(sizeof...(TargetSpaces) == 2, "SurfaceCosseratEnergy needs exactly two TargetSpaces!");
- const auto& quad = Dune::QuadratureRules<DT, boundaryDim>::rule(it.type(), quadOrder);
- for (size_t pt=0; pt<quad.size(); pt++) {
-
- // Local position of the quadrature point
- const Dune::FieldVector<DT,gridDim>& quadPos = it.geometryInInside().global(quad[pt].position());;
+ using namespace Dune::Indices;
+ using TargetSpace0 = typename std::tuple_element<0, std::tuple<TargetSpaces...> >::type;
+ const std::vector<TargetSpace0>& localSolution0 = std::get<0>(std::forward_as_tuple(localSolutions ...));
+ using TargetSpace1 = typename std::tuple_element<1, std::tuple<TargetSpaces...> >::type;
+ const std::vector<TargetSpace1>& localSolution1 = std::get<1>(std::forward_as_tuple(localSolutions ...));
- // Global position of the quadrature point
- auto quadPosGlobal = it.geometry().global(quad[pt].position());
- double thickness = thicknessF_(quadPosGlobal);
- auto lameConstants = lameF_(quadPosGlobal);
- double mu = lameConstants[0];
- double lambda = lameConstants[1];
+ // The element geometry
+ auto element = localView.element();
+ auto gridView = localView.globalBasis().gridView();
- const DT integrationElement = boundaryGeometry.integrationElement(quad[pt].position());
+ ////////////////////////////////////////////////////////////////////////////////////
+ // Set up the local nonlinear finite element function
+ ////////////////////////////////////////////////////////////////////////////////////
+ using namespace Dune::TypeTree::Indices;
- RBM value;
- Dune::FieldMatrix<RT, RBM::embeddedDim, dimWorld> derivative;
- Dune::FieldMatrix<RT, RBM::embeddedDim, boundaryDim> derivative2D;
+ // The set of shape functions on this element
+ const auto& deformationLocalFiniteElement = localView.tree().child(_0,0).finiteElement();
+ const auto& orientationLocalFiniteElement = localView.tree().child(_1,0).finiteElement();
+ // to construct a local GFE function, in case they are the shape functions are the same, we can use use one GFE-Function
#if MIXED_SPACE
- // The value of the local function
- RBM0 value0 = localGeodesicFEFunction0.evaluate(quadPos);
- RBM1 value1 = localGeodesicFEFunction1.evaluate(quadPos);
- // The derivatives of the local functions
- auto derivative0 = localGeodesicFEFunction0.evaluateDerivative(quadPos,value0);
- auto derivative1 = localGeodesicFEFunction1.evaluateDerivative(quadPos,value1);
-
- // Put the value and the derivatives together from the separated values
- for (int i = 0; i < RBM0::dim; i++)
- value.r[i] = value0[i];
- value.q = value1;
- for (int j = 0; j < dimWorld; j++) {
- for (int i = 0; i < RBM0::embeddedDim; i++) {
- derivative[i][j] = derivative0[i][j];
- if (j < boundaryDim)
- derivative2D[i][j] = derivative0[i][j];
- }
- for (int i = 0; i < RBM1::embeddedDim; i++) {
- derivative[RBM0::embeddedDim + i][j] = derivative1[i][j];
- if (j < boundaryDim)
- derivative2D[RBM0::embeddedDim + i][j] = derivative1[i][j];
- }
- }
+ std::vector<RBM0> localSolutionRBM0(localSolution0.size());
+ std::vector<RBM1> localSolutionRBM1(localSolution1.size());
+ for (int i = 0; i < localSolution0.size(); i++)
+ localSolutionRBM0[i] = localSolution0[i];
+ for (int i = 0; i< localSolution1.size(); i++)
+ localSolutionRBM1[i] = localSolution1[i];
+ typedef LocalGeodesicFEFunction<gridDim, DT, decltype(deformationLocalFiniteElement), RBM0> LocalGFEFunctionType0;
+ typedef LocalGeodesicFEFunction<gridDim, DT, decltype(orientationLocalFiniteElement), RBM1> LocalGFEFunctionType1;
+ LocalGFEFunctionType0 localGeodesicFEFunction0(deformationLocalFiniteElement,localSolutionRBM0);
+ LocalGFEFunctionType1 localGeodesicFEFunction1(orientationLocalFiniteElement,localSolutionRBM1);
#else
- value = localGeodesicFEFunction.evaluate(quadPos);
- derivative = localGeodesicFEFunction.evaluateDerivative(quadPos,value);
- for (int i = 0; i < RBM::embeddedDim; i++)
- for (int j = 0; j < boundaryDim; j++)
- derivative2D[i][j] = derivative[i][j];
+ std::vector<RBM> localSolutionRBM(localSolution0.size());
+ for (int i = 0; i < localSolution0.size(); i++) {
+ for (int j = 0; j < dimWorld; j++)
+ localSolutionRBM[i].r[j] = localSolution0[i][j];
+ localSolutionRBM[i].q = localSolution1[i];
+ }
+ typedef LocalGeodesicFEFunction<gridDim, DT, decltype(deformationLocalFiniteElement), RBM> LocalGFEFunctionType;
+ LocalGFEFunctionType localGeodesicFEFunction(deformationLocalFiniteElement,localSolutionRBM);
#endif
- //////////////////////////////////////////////////////////
- // The rotation and its derivative
- // Note: we need it in matrix coordinates
- //////////////////////////////////////////////////////////
+ RT energy = 0;
- Dune::FieldMatrix<RT,dimWorld,dimWorld> R;
- value.q.matrix(R);
- auto rt = Dune::GFE::transpose(R);
+ for (auto&& it : intersections(shellBoundary_->gridView(), element)) {
+ if (not shellBoundary_->contains(it))
+ continue;
- Tensor3<RT,dimWorld,dimWorld,boundaryDim> derivative_rotation;
- computeDR(value, derivative2D, derivative_rotation);
+ auto localGridFunction = localFunction(curvedGeometryGridFunction_);
+ auto curvedGeometryGridFunctionOrder = deformationLocalFiniteElement.localBasis().order();//curvedGeometryGridFunction_.basis().localView().tree().child(0).finiteElement().localBasis().order();
+ localGridFunction.bind(element);
+ auto referenceElement = Dune::referenceElement<DT,boundaryDim>(it.type());
- //////////////////////////////////////////////////////////
- // Fundamental forms and curvature
- //////////////////////////////////////////////////////////
+ // Construct the geometry on the boundary using the map lGF(localGeometry.global(local)):
+ // The variable local holds the local coordinates in the 2D reference element, localGeometry.global maps them to the 3D reference element.
+ // The function lGF is the gridfunction bound to the current element, so lGF(localGeometry.global(local)) is the value of curvedGeometryGridFunction_ at
+ // the point on the intersection face.
+ using BoundaryGeometry = Dune::CurvedGeometry<DT, boundaryDim, dimWorld, Dune::CurvedGeometryTraits<DT, Dune::LagrangeLFECache<DT,DT,boundaryDim> > >;
+ BoundaryGeometry boundaryGeometry(referenceElement,
+ [localGridFunction, localGeometry=it.geometryInInside()](const auto& local) {
+ return localGridFunction(localGeometry.global(local));
+ }, curvedGeometryGridFunctionOrder);
- // First fundamental form
- Dune::FieldMatrix<double,dimWorld,dimWorld> aCovariant;
+ auto quadOrder = (it.type().isSimplex()) ? deformationLocalFiniteElement.localBasis().order()
+ : deformationLocalFiniteElement.localBasis().order() * boundaryDim;
- // If dimWorld==3, then the first two lines of aCovariant are simply the jacobianTransposed
- // of the element. If dimWorld<3 (i.e., ==2), we have to explicitly enters 0.0 in the last column.
- const auto jacobianTransposed = boundaryGeometry.jacobianTransposed(quad[pt].position());
+ const auto& quad = Dune::QuadratureRules<DT, boundaryDim>::rule(it.type(), quadOrder);
+ for (size_t pt=0; pt<quad.size(); pt++) {
- for (int i=0; i<2; i++)
- {
- for (int j=0; j<dimWorld; j++)
- aCovariant[i][j] = jacobianTransposed[i][j];
- for (int j=dimWorld; j<3; j++)
- aCovariant[i][j] = 0.0;
- }
+ // Local position of the quadrature point
+ const Dune::FieldVector<DT,gridDim>& quadPos = it.geometryInInside().global(quad[pt].position());;
- aCovariant[2] = Dune::FMatrixHelp::Impl::crossProduct(aCovariant[0], aCovariant[1]);
- aCovariant[2] /= aCovariant[2].two_norm();
-
- auto aContravariant = aCovariant;
- aContravariant.invert();
- // The contravariant base vectors are the *columns* of the inverse of the covariant matrix
- // To get an easier access to the columns, we use the transpose of the contravariant matrix
- aContravariant = Dune::GFE::transpose(aContravariant);
-
- Dune::FieldMatrix<double,3,3> a(0);
- for (int alpha=0; alpha<boundaryDim; alpha++)
- a += Dune::GFE::dyadicProduct(aCovariant[alpha], aContravariant[alpha]);
-
- auto a00 = aCovariant[0] * aCovariant[0];
- auto a01 = aCovariant[0] * aCovariant[1];
- auto a10 = aCovariant[1] * aCovariant[0];
- auto a11 = aCovariant[1] * aCovariant[1];
- auto aScalar = std::sqrt(a00*a11 - a10*a01);
-
- // Alternator tensor
- Dune::FieldMatrix<int,2,2> eps = {{0,1},{-1,0}};
- Dune::FieldMatrix<double,3,3> c(0);
-
- for (int alpha=0; alpha<2; alpha++)
- for (int beta=0; beta<2; beta++)
- c += aScalar * eps[alpha][beta] * Dune::GFE::dyadicProduct(aContravariant[alpha], aContravariant[beta]);
-
- // Second fundamental form: The derivative of the normal field
- auto b = boundaryGeometry.normalGradient(quad[pt].position());
- b *= (-1);
-
- // Mean curvatue
- auto H = 0.5 * Dune::GFE::trace(b);
-
- // Gauss curvature, calculated with the normalGradient in the eucidean coordinate system
- // see e.g. formula (3.5) from "Refined dimensional reduction for isotropic elastic Cosserat shells with initial curvature"
- auto bSquared = b*b;
- auto K = 2*H*H - 0.5*Dune::GFE::trace(bSquared);
-
- //////////////////////////////////////////////////////////
- // Strain tensors
- //////////////////////////////////////////////////////////
-
- // Elastic shell strain
- Dune::FieldMatrix<RT,3,3> Ee(0);
- Dune::FieldMatrix<RT,3,3> grad_s_m(0);
- for (int alpha=0; alpha<boundaryDim; alpha++)
- {
- Dune::FieldVector<RT,3> vec;
- for (int i=0; i<3; i++)
- vec[i] = derivative[i][alpha];
- grad_s_m += Dune::GFE::dyadicProduct(vec, aContravariant[alpha]);
- }
+ // Global position of the quadrature point
+ auto quadPosGlobal = it.geometry().global(quad[pt].position());
+ double thickness = thicknessF_(quadPosGlobal);
+ auto lameConstants = lameF_(quadPosGlobal);
+ double mu = lameConstants[0];
+ double lambda = lameConstants[1];
- Ee = rt * grad_s_m - a;
-
- // Elastic shell bending-curvature strain
- Dune::FieldMatrix<RT,3,3> Ke(0);
- for (int alpha=0; alpha<boundaryDim; alpha++)
- {
- Dune::FieldMatrix<RT,3,3> tmp;
- for (int i=0; i<3; i++)
- for (int j=0; j<3; j++)
- tmp[i][j] = derivative_rotation[i][j][alpha];
- auto tmp2 = rt * tmp;
- Ke += Dune::GFE::dyadicProduct(SkewMatrix<RT,3>(tmp2).axial(), aContravariant[alpha]);
- }
+ const DT integrationElement = boundaryGeometry.integrationElement(quad[pt].position());
- //////////////////////////////////////////////////////////
- // Add the local energy density
- //////////////////////////////////////////////////////////
+ RBM value;
+ Dune::FieldMatrix<RT, RBM::embeddedDim, dimWorld> derivative;
+ Dune::FieldMatrix<RT, RBM::embeddedDim, boundaryDim> derivative2D;
- // Add the membrane energy density
- auto energyDensity = (thickness - K*Dune::power(thickness,3) / 12.0) * W_m(Ee, mu, lambda);
- energyDensity += (Dune::power(thickness,3) / 12.0 - K * Dune::power(thickness,5) / 80.0)*W_m(Ee*b + c*Ke, mu, lambda);
- energyDensity += Dune::power(thickness,3) / 6.0 * W_mixt(Ee, c*Ke*b - 2*H*c*Ke, mu, lambda);
- energyDensity += Dune::power(thickness,5) / 80.0 * W_mp( (Ee*b + c*Ke)*b, mu, lambda);
+#if MIXED_SPACE
+ // The value of the local function
+ RBM0 value0 = localGeodesicFEFunction0.evaluate(quadPos);
+ RBM1 value1 = localGeodesicFEFunction1.evaluate(quadPos);
+ // The derivatives of the local functions
+ auto derivative0 = localGeodesicFEFunction0.evaluateDerivative(quadPos,value0);
+ auto derivative1 = localGeodesicFEFunction1.evaluateDerivative(quadPos,value1);
+
+ // Put the value and the derivatives together from the separated values
+ for (int i = 0; i < RBM0::dim; i++)
+ value.r[i] = value0[i];
+ value.q = value1;
+ for (int j = 0; j < dimWorld; j++) {
+ for (int i = 0; i < RBM0::embeddedDim; i++) {
+ derivative[i][j] = derivative0[i][j];
+ if (j < boundaryDim)
+ derivative2D[i][j] = derivative0[i][j];
+ }
+ for (int i = 0; i < RBM1::embeddedDim; i++) {
+ derivative[RBM0::embeddedDim + i][j] = derivative1[i][j];
+ if (j < boundaryDim)
+ derivative2D[RBM0::embeddedDim + i][j] = derivative1[i][j];
+ }
+ }
+#else
+ value = localGeodesicFEFunction.evaluate(quadPos);
+ derivative = localGeodesicFEFunction.evaluateDerivative(quadPos,value);
+ for (int i = 0; i < RBM::embeddedDim; i++)
+ for (int j = 0; j < boundaryDim; j++)
+ derivative2D[i][j] = derivative[i][j];
+#endif
- // Add the bending energy density
- energyDensity += (thickness - K*Dune::power(thickness,3) / 12.0) * W_curv(Ke, mu)
- + (Dune::power(thickness,3) / 12.0 - K * Dune::power(thickness,5) / 80.0)*W_curv(Ke*b, mu)
- + Dune::power(thickness,5) / 80.0 * W_curv(Ke*b*b, mu);
+ //////////////////////////////////////////////////////////
+ // The rotation and its derivative
+ // Note: we need it in matrix coordinates
+ //////////////////////////////////////////////////////////
+
+ Dune::FieldMatrix<RT,dimWorld,dimWorld> R;
+ value.q.matrix(R);
+ auto rt = Dune::GFE::transpose(R);
+
+ Tensor3<RT,dimWorld,dimWorld,boundaryDim> derivative_rotation;
+ computeDR(value, derivative2D, derivative_rotation);
+
+ //////////////////////////////////////////////////////////
+ // Fundamental forms and curvature
+ //////////////////////////////////////////////////////////
+
+ // First fundamental form
+ Dune::FieldMatrix<double,dimWorld,dimWorld> aCovariant;
+
+ // If dimWorld==3, then the first two lines of aCovariant are simply the jacobianTransposed
+ // of the element. If dimWorld<3 (i.e., ==2), we have to explicitly enters 0.0 in the last column.
+ const auto jacobianTransposed = boundaryGeometry.jacobianTransposed(quad[pt].position());
+
+ for (int i=0; i<2; i++)
+ {
+ for (int j=0; j<dimWorld; j++)
+ aCovariant[i][j] = jacobianTransposed[i][j];
+ for (int j=dimWorld; j<3; j++)
+ aCovariant[i][j] = 0.0;
+ }
+
+ aCovariant[2] = Dune::FMatrixHelp::Impl::crossProduct(aCovariant[0], aCovariant[1]);
+ aCovariant[2] /= aCovariant[2].two_norm();
+
+ auto aContravariant = aCovariant;
+ aContravariant.invert();
+ // The contravariant base vectors are the *columns* of the inverse of the covariant matrix
+ // To get an easier access to the columns, we use the transpose of the contravariant matrix
+ aContravariant = Dune::GFE::transpose(aContravariant);
+
+ Dune::FieldMatrix<double,3,3> a(0);
+ for (int alpha=0; alpha<boundaryDim; alpha++)
+ a += Dune::GFE::dyadicProduct(aCovariant[alpha], aContravariant[alpha]);
+
+ auto a00 = aCovariant[0] * aCovariant[0];
+ auto a01 = aCovariant[0] * aCovariant[1];
+ auto a10 = aCovariant[1] * aCovariant[0];
+ auto a11 = aCovariant[1] * aCovariant[1];
+ auto aScalar = std::sqrt(a00*a11 - a10*a01);
+
+ // Alternator tensor
+ Dune::FieldMatrix<int,2,2> eps = {{0,1},{-1,0}};
+ Dune::FieldMatrix<double,3,3> c(0);
+
+ for (int alpha=0; alpha<2; alpha++)
+ for (int beta=0; beta<2; beta++)
+ c += aScalar * eps[alpha][beta] * Dune::GFE::dyadicProduct(aContravariant[alpha], aContravariant[beta]);
+
+ // Second fundamental form: The derivative of the normal field
+ auto b = boundaryGeometry.normalGradient(quad[pt].position());
+ b *= (-1);
+
+ // Mean curvatue
+ auto H = 0.5 * Dune::GFE::trace(b);
+
+ // Gauss curvature, calculated with the normalGradient in the eucidean coordinate system
+ // see e.g. formula (3.5) from "Refined dimensional reduction for isotropic elastic Cosserat shells with initial curvature"
+ auto bSquared = b*b;
+ auto K = 2*H*H - 0.5*Dune::GFE::trace(bSquared);
+
+ //////////////////////////////////////////////////////////
+ // Strain tensors
+ //////////////////////////////////////////////////////////
+
+ // Elastic shell strain
+ Dune::FieldMatrix<RT,3,3> Ee(0);
+ Dune::FieldMatrix<RT,3,3> grad_s_m(0);
+ for (int alpha=0; alpha<boundaryDim; alpha++)
+ {
+ Dune::FieldVector<RT,3> vec;
+ for (int i=0; i<3; i++)
+ vec[i] = derivative[i][alpha];
+ grad_s_m += Dune::GFE::dyadicProduct(vec, aContravariant[alpha]);
+ }
+
+ Ee = rt * grad_s_m - a;
+
+ // Elastic shell bending-curvature strain
+ Dune::FieldMatrix<RT,3,3> Ke(0);
+ for (int alpha=0; alpha<boundaryDim; alpha++)
+ {
+ Dune::FieldMatrix<RT,3,3> tmp;
+ for (int i=0; i<3; i++)
+ for (int j=0; j<3; j++)
+ tmp[i][j] = derivative_rotation[i][j][alpha];
+ auto tmp2 = rt * tmp;
+ Ke += Dune::GFE::dyadicProduct(SkewMatrix<RT,3>(tmp2).axial(), aContravariant[alpha]);
+ }
+
+ //////////////////////////////////////////////////////////
+ // Add the local energy density
+ //////////////////////////////////////////////////////////
+
+ // Add the membrane energy density
+ auto energyDensity = (thickness - K*Dune::power(thickness,3) / 12.0) * W_m(Ee, mu, lambda);
+ energyDensity += (Dune::power(thickness,3) / 12.0 - K * Dune::power(thickness,5) / 80.0)*W_m(Ee*b + c*Ke, mu, lambda);
+ energyDensity += Dune::power(thickness,3) / 6.0 * W_mixt(Ee, c*Ke*b - 2*H*c*Ke, mu, lambda);
+ energyDensity += Dune::power(thickness,5) / 80.0 * W_mp( (Ee*b + c*Ke)*b, mu, lambda);
+
+ // Add the bending energy density
+ energyDensity += (thickness - K*Dune::power(thickness,3) / 12.0) * W_curv(Ke, mu)
+ + (Dune::power(thickness,3) / 12.0 - K * Dune::power(thickness,5) / 80.0)*W_curv(Ke*b, mu)
+ + Dune::power(thickness,5) / 80.0 * W_curv(Ke*b*b, mu);
+
+ // Add energy density
+ energy += quad[pt].weight() * integrationElement * energyDensity;
+ }
+ }
- // Add energy density
- energy += quad[pt].weight() * integrationElement * energyDensity;
+ return energy;
}
- }
-
- return energy;
-}
- RT W_m(const Dune::FieldMatrix<RT,3,3>& S, double mu, double lambda) const
- {
- return W_mixt(S,S, mu, lambda);
- }
+ RT W_m(const Dune::FieldMatrix<RT,3,3>& S, double mu, double lambda) const
+ {
+ return W_mixt(S,S, mu, lambda);
+ }
- RT W_mixt(const Dune::FieldMatrix<RT,3,3>& S, const Dune::FieldMatrix<RT,3,3>& T, double mu, double lambda) const
- {
- return mu * Dune::GFE::frobeniusProduct(Dune::GFE::sym(S), Dune::GFE::sym(T))
- + mu_c_ * Dune::GFE::frobeniusProduct(Dune::GFE::skew(S), Dune::GFE::skew(T))
- + lambda * mu / (lambda + 2*mu) * Dune::GFE::trace(S) * Dune::GFE::trace(T);
- }
+ RT W_mixt(const Dune::FieldMatrix<RT,3,3>& S, const Dune::FieldMatrix<RT,3,3>& T, double mu, double lambda) const
+ {
+ return mu * Dune::GFE::frobeniusProduct(Dune::GFE::sym(S), Dune::GFE::sym(T))
+ + mu_c_ * Dune::GFE::frobeniusProduct(Dune::GFE::skew(S), Dune::GFE::skew(T))
+ + lambda * mu / (lambda + 2*mu) * Dune::GFE::trace(S) * Dune::GFE::trace(T);
+ }
- RT W_mp(const Dune::FieldMatrix<RT,3,3>& S, double mu, double lambda) const
- {
- return mu * Dune::GFE::sym(S).frobenius_norm2() + mu_c_ * Dune::GFE::skew(S).frobenius_norm2() + lambda * 0.5 * Dune::GFE::traceSquared(S);
- }
+ RT W_mp(const Dune::FieldMatrix<RT,3,3>& S, double mu, double lambda) const
+ {
+ return mu * Dune::GFE::sym(S).frobenius_norm2() + mu_c_ * Dune::GFE::skew(S).frobenius_norm2() + lambda * 0.5 * Dune::GFE::traceSquared(S);
+ }
- RT W_curv(const Dune::FieldMatrix<RT,3,3>& S, double mu) const
- {
- return mu * L_c_ * L_c_ * (b1_ * Dune::GFE::dev(Dune::GFE::sym(S)).frobenius_norm2()
- + b2_ * Dune::GFE::skew(S).frobenius_norm2() + b3_ * Dune::GFE::traceSquared(S));
- }
+ RT W_curv(const Dune::FieldMatrix<RT,3,3>& S, double mu) const
+ {
+ return mu * L_c_ * L_c_ * (b1_ * Dune::GFE::dev(Dune::GFE::sym(S)).frobenius_norm2()
+ + b2_ * Dune::GFE::skew(S).frobenius_norm2() + b3_ * Dune::GFE::traceSquared(S));
+ }
-private:
- /** \brief The shell boundary */
- const BoundaryPatch<GridView>* shellBoundary_;
+ private:
+ /** \brief The shell boundary */
+ const BoundaryPatch<GridView>* shellBoundary_;
- /** \brief The function used to create the Geometries used for assembling */
- const CurvedGeometryGridFunction curvedGeometryGridFunction_;
+ /** \brief The function used to create the Geometries used for assembling */
+ const CurvedGeometryGridFunction curvedGeometryGridFunction_;
- /** \brief The shell thickness as a function*/
- std::function<double(Dune::FieldVector<double,dimWorld>)> thicknessF_;
+ /** \brief The shell thickness as a function*/
+ std::function<double(Dune::FieldVector<double,dimWorld>)> thicknessF_;
- /** \brief The Lamé-parameters as a function*/
- std::function<Dune::FieldVector<double,2>(Dune::FieldVector<double,dimWorld>)> lameF_;
+ /** \brief The Lamé-parameters as a function*/
+ std::function<Dune::FieldVector<double,2>(Dune::FieldVector<double,dimWorld>)> lameF_;
- /** \brief Lame constants */
- double mu_, lambda_;
+ /** \brief Lame constants */
+ double mu_, lambda_;
- /** \brief Cosserat couple modulus, preferably 0 */
- double mu_c_;
+ /** \brief Cosserat couple modulus, preferably 0 */
+ double mu_c_;
- /** \brief Length scale parameter */
- double L_c_;
+ /** \brief Length scale parameter */
+ double L_c_;
- /** \brief Curvature parameters */
- double b1_, b2_, b3_;
+ /** \brief Curvature parameters */
+ double b1_, b2_, b3_;
-};
+ };
} // namespace Dune::GFE
#endif //#ifndef DUNE_GFE_SURFACECOSSERATENERGY_HH
diff --git a/dune/gfe/assemblers/surfacecosseratstressassembler.hh b/dune/gfe/assemblers/surfacecosseratstressassembler.hh
index 5c4f6da3..74db17fc 100644
--- a/dune/gfe/assemblers/surfacecosseratstressassembler.hh
+++ b/dune/gfe/assemblers/surfacecosseratstressassembler.hh
@@ -12,294 +12,294 @@
namespace Dune::GFE {
/** \brief An assembler that can calculate the norms of specific stress tensors for each element for an output by film-on-substrate
- \tparam BasisOrderD Basis used for the displacement
- \tparam BasisOrderR Basis used for the rotation
- \tparam TargetSpaceD Target space for the Displacement
- \tparam TargetSpaceR Target space for the Rotation
- */
+ \tparam BasisOrderD Basis used for the displacement
+ \tparam BasisOrderR Basis used for the rotation
+ \tparam TargetSpaceD Target space for the Displacement
+ \tparam TargetSpaceR Target space for the Rotation
+ */
template <class BasisOrderD, class BasisOrderR, class TargetSpaceD, class TargetSpaceR>
class SurfaceCosseratStressAssembler
{
- public:
- const static int dim = TargetSpaceD::dimension;
- using GridView = typename BasisOrderD::GridView;
- using VectorD = std::vector<TargetSpaceD>;
- using VectorR = std::vector<TargetSpaceR>;
+ public:
+ const static int dim = TargetSpaceD::dimension;
+ using GridView = typename BasisOrderD::GridView;
+ using VectorD = std::vector<TargetSpaceD>;
+ using VectorR = std::vector<TargetSpaceR>;
- BasisOrderD basisOrderD_;
- BasisOrderR basisOrderR_;
+ BasisOrderD basisOrderD_;
+ BasisOrderR basisOrderR_;
- SurfaceCosseratStressAssembler(const BasisOrderD basisOrderD,
- const BasisOrderR basisOrderR)
+ SurfaceCosseratStressAssembler(const BasisOrderD basisOrderD,
+ const BasisOrderR basisOrderR)
: basisOrderD_(basisOrderD),
- basisOrderR_(basisOrderR)
- {}
-
- /** \brief Calculate the norm of the 1st-Piola-Kirchhoff-Stress-Tensor and the Cauchy-Stress-Tensor for each element
-
- The 1st-Piola-Kirchhoff-Stress-Tensor is the derivative of the energy density with respect to the deformation gradient
- - Calculate the deformation gradient for each element using the basis functions and
- their gradients; then add them up using the localConfiguration
- - Evaluate the deformation gradient at each quadrature point using the respective quadrature rule with the given order
- - Evaluate the density function and tape the evaluation - then use ADOLC to evaluate the derivative (∂/∂F) W(F)
- - The derivative is then a dim x dim matrix
- - Then calculate the final stressTensor of the element by averagin over the quadrature points using the quadrature
- weights and the reference element volume
- \param x Coefficient vector for the displacement
- \param elasticDensity Energy density function
- \param int Order of the quadrature rule
- \param stressSubstrate1stPiolaKirchhoffTensor Vector containing the the 1st-Piola-Kirchhoff-Stress-Tensor for each element
- \param stressSubstrateCauchyTensor Vector containing the Cauchy-Stress-Tensor for each element
+ basisOrderR_(basisOrderR)
+ {}
+
+ /** \brief Calculate the norm of the 1st-Piola-Kirchhoff-Stress-Tensor and the Cauchy-Stress-Tensor for each element
+
+ The 1st-Piola-Kirchhoff-Stress-Tensor is the derivative of the energy density with respect to the deformation gradient
+ - Calculate the deformation gradient for each element using the basis functions and
+ their gradients; then add them up using the localConfiguration
+ - Evaluate the deformation gradient at each quadrature point using the respective quadrature rule with the given order
+ - Evaluate the density function and tape the evaluation - then use ADOLC to evaluate the derivative (∂/∂F) W(F)
+ - The derivative is then a dim x dim matrix
+ - Then calculate the final stressTensor of the element by averagin over the quadrature points using the quadrature
+ weights and the reference element volume
+ \param x Coefficient vector for the displacement
+ \param elasticDensity Energy density function
+ \param int Order of the quadrature rule
+ \param stressSubstrate1stPiolaKirchhoffTensor Vector containing the the 1st-Piola-Kirchhoff-Stress-Tensor for each element
+ \param stressSubstrateCauchyTensor Vector containing the Cauchy-Stress-Tensor for each element
*/
- template <class Density>
- void assembleSubstrateStress(
- const VectorD x,
- const Density* elasticDensity,
- const int quadOrder,
- std::vector<FieldMatrix<double,dim,dim>>& stressSubstrate1stPiolaKirchhoffTensor,
- std::vector<FieldMatrix<double,dim,dim>>& stressSubstrateCauchyTensor)
+ template <class Density>
+ void assembleSubstrateStress(
+ const VectorD x,
+ const Density* elasticDensity,
+ const int quadOrder,
+ std::vector<FieldMatrix<double,dim,dim> >& stressSubstrate1stPiolaKirchhoffTensor,
+ std::vector<FieldMatrix<double,dim,dim> >& stressSubstrateCauchyTensor)
+ {
+
+ std::cout << "Calculating the Frobenius norm of the 1st-Piola-Kirchhoff-Stress-Tensor ( (∂/∂F) W(F) )" << std::endl
+ << "and the Frobenius norm of the Cauchy-Stress-Tensor (1/det(F) * (∂/∂F) W(F) * F^T) of the substrate..." << std::endl;
+
+ auto xFlat = Functions::istlVectorBackend(x);
+ static constexpr auto partitionType = Partitions::interiorBorder;
+ MultipleCodimMultipleGeomTypeMapper<GridView> elementMapper(basisOrderD_.gridView(),mcmgElementLayout());
+ stressSubstrate1stPiolaKirchhoffTensor.resize(elementMapper.size());
+ stressSubstrateCauchyTensor.resize(elementMapper.size());
+
+ for (const auto& element : elements(basisOrderD_.gridView(), partitionType))
{
+ auto localViewOrderD = basisOrderD_.localView();
+ localViewOrderD.bind(element);
+ size_t nDofsOrderD = localViewOrderD.tree().size();
+
+ // Extract values at this element
+ std::vector<double> localConfiguration(nDofsOrderD);
+ for (size_t i=0; i<nDofsOrderD; i++)
+ localConfiguration[i] = xFlat[localViewOrderD.index(i)]; //localViewOrderD.index(i) is a multi-index
+
+ //Store the reference gradient and the gradients for this element
+ const auto& lFEOrderD = localViewOrderD.tree().child(0).finiteElement();
+ std::vector<FieldMatrix<double,1,dim> > referenceGradients(lFEOrderD.size());
+ std::vector<FieldMatrix<double,1,dim> > gradients(lFEOrderD.size());
+
+ auto evaluateAtPoint = [&](FieldVector<double,3> pointGlobal, FieldVector<double,3> pointLocal) -> std::vector<FieldMatrix<double,dim,dim> > {
+ std::vector<FieldMatrix<double,dim,dim> > stressTensors(2);
+
+ const auto jacobianInverseTransposed = element.geometry().jacobianInverseTransposed(pointLocal);
+
+ // Get gradients of shape functions
+ lFEOrderD.localBasis().evaluateJacobian(pointLocal, referenceGradients);
+
+ // Compute gradients of Base functions
+ for (size_t i=0; i<gradients.size(); ++i)
+ gradients[i] = referenceGradients[i] * transpose(jacobianInverseTransposed);
+
+ // Deformation gradient in vector form
+ size_t nDoubles = dim*dim;
+ std::vector<double> deformationGradientFlat(nDoubles);
+ for (size_t i=0; i<nDoubles; i++)
+ deformationGradientFlat[i] = 0;
+ for (size_t i=0; i<gradients.size(); i++)
+ for (size_t j=0; j<dim; j++)
+ for (size_t k=0; k<dim; k++)
+ deformationGradientFlat[dim*j + k] += localConfiguration[ localViewOrderD.tree().child(j).localIndex(i)]*gradients[i][0][k];
+
+ double pureDensity = 0;
+
+ trace_on(0);
+
+ FieldMatrix<adouble,dim,dim> deformationGradient(0);
+ for (size_t j=0; j<dim; j++)
+ for (size_t k=0; k<dim; k++)
+ deformationGradient[j][k] <<= deformationGradientFlat[dim*j + k];
+
+ // Tape the actual calculation
+ adouble density = 0;
+ try {
+ density = (*elasticDensity)(pointGlobal, deformationGradient);
+ } catch (Exception &e) {
+ trace_off(0);
+ throw e;
+ }
+ density >>= pureDensity;
+
+ trace_off(0);
+
+ // Compute the actual gradient
+ std::vector<double> localStressFlat(nDoubles);
+ gradient(0,nDoubles,deformationGradientFlat.data(),localStressFlat.data());
+
+ FieldMatrix<double,dim,dim> localStress(0);
+ for (size_t j=0; j<dim; j++)
+ for (size_t k=0; k<dim; k++)
+ localStress[j][k] = localStressFlat[dim*j + k];
+
+ stressTensors[0] = localStress; // 1st-Piola-Kirchhoff-Stress-Tensor
+
+ FieldMatrix<double,dim,dim> deformationGradientTransposed(0);
+ for (size_t j=0; j<dim; j++)
+ for (size_t k=0; k<dim; k++)
+ deformationGradient[j][k] >>= deformationGradientTransposed[k][j];
+
+ localStress /= deformationGradientTransposed.determinant();
+ localStress = localStress * deformationGradientTransposed;
+ stressTensors[1] = localStress; // Cauchy-Stress-Tensor
+
+ return stressTensors;
+ };
+
+ //Call evaluateAtPoint for all points in the quadrature rule
+ const auto& quad = Dune::QuadratureRules<double, dim>::rule(element.type(), quadOrder);
+ stressSubstrate1stPiolaKirchhoffTensor[elementMapper.index(element)] = 0;
+ stressSubstrateCauchyTensor[elementMapper.index(element)] = 0;
+
+ for (size_t pt=0; pt<quad.size(); pt++) {
+ auto pointLocal = quad[pt].position();
+ auto pointGlobal = element.geometry().global(pointLocal);
+ auto stressTensors = evaluateAtPoint(pointGlobal, pointLocal);
+ stressSubstrate1stPiolaKirchhoffTensor[elementMapper.index(element)] += stressTensors[0] * quad[pt].weight()/referenceElement(element).volume();
+ stressSubstrateCauchyTensor[elementMapper.index(element)] += stressTensors[1] * quad[pt].weight()/referenceElement(element).volume();
+ }
+ }
+ }
+ /** \brief Calculate the norm of the Biot-Type-Stress-Tensor of the shell
+
+ The formula for Biot-Type-Stress-Tensor of the Cosserat shell given by (4.11) in
+ Ghiba, Bîrsan, Lewintan, Neff, March 2020: "The isotropic Cosserat shell model including terms up to $O(h^5)$. Part I: Derivation in matrix notation"
+ \param rot Coefficient vector for the rotation
+ \param x Coefficient vector for the displacement
+ \param xInitial Coefficient vector for the stress-free configuration of the shell, used to calculate nablaTheta
+ \param lameF Function assigning the Lamé parameters to a given point
+ \param mu_c Cosserat couple modulus
+ \param shellBoundary BoundaryPatch containing the elements that actually belong to the shell
+ \param order Order of the quadrature rule
+ \param stressShellBiotTensor Vector containing the Biot-Stress-Tensor for each element
+ */
+ void assembleShellStress(
+ const VectorR rot,
+ const VectorD x,
+ const VectorD xInitial,
+ const std::function<Dune::FieldVector<double,2>(Dune::FieldVector<double,dim>)> lameF,
+ const double mu_c,
+ const BoundaryPatch<GridView> shellBoundary,
+ const int quadOrder,
+ std::vector<FieldMatrix<double,dim,dim> >& stressShellBiotTensor)
+ {
+ std::cout << "Calculating the Frobenius norm of the Biot-Type-Stress-Tensor of the shell..." << std::endl;
+ auto xFlat = Functions::istlVectorBackend(x);
+ auto xInitialFlat = Functions::istlVectorBackend(xInitial);
+
+ MultipleCodimMultipleGeomTypeMapper<GridView> elementMapper(basisOrderD_.gridView(),mcmgElementLayout());
+ stressShellBiotTensor.resize(elementMapper.size());
+
+ static constexpr auto partitionType = Partitions::interiorBorder;
+ for (const auto& element : elements(basisOrderD_.gridView(), partitionType))
+ {
+ stressShellBiotTensor[elementMapper.index(element)] = 0;
- std::cout << "Calculating the Frobenius norm of the 1st-Piola-Kirchhoff-Stress-Tensor ( (∂/∂F) W(F) )" << std::endl
- << "and the Frobenius norm of the Cauchy-Stress-Tensor (1/det(F) * (∂/∂F) W(F) * F^T) of the substrate..." << std::endl;
+ int intersectionCounter = 0;
+ for (auto&& it : intersections(shellBoundary.gridView(), element)) {
+ FieldMatrix<double,dim,dim> stressTensorThisIntersection(0);
- auto xFlat = Functions::istlVectorBackend(x);
- static constexpr auto partitionType = Partitions::interiorBorder;
- MultipleCodimMultipleGeomTypeMapper<GridView> elementMapper(basisOrderD_.gridView(),mcmgElementLayout());
- stressSubstrate1stPiolaKirchhoffTensor.resize(elementMapper.size());
- stressSubstrateCauchyTensor.resize(elementMapper.size());
+ //Continue if the element does not intersect with the shell boundary
+ if (not shellBoundary.contains(it))
+ continue;
- for (const auto& element : elements(basisOrderD_.gridView(), partitionType))
- {
+ //LocalView for the basisOrderD_
auto localViewOrderD = basisOrderD_.localView();
localViewOrderD.bind(element);
size_t nDofsOrderD = localViewOrderD.tree().size();
- // Extract values at this element
+ // Extract local configuration at this element
std::vector<double> localConfiguration(nDofsOrderD);
- for (size_t i=0; i<nDofsOrderD; i++)
- localConfiguration[i] = xFlat[localViewOrderD.index(i)]; //localViewOrderD.index(i) is a multi-index
+ std::vector<double> localConfigurationInitial(nDofsOrderD);
+ for (size_t i=0; i<nDofsOrderD; i++) {
+ localConfiguration[i] = xFlat[localViewOrderD.index(i)];
+ localConfigurationInitial[i] = xInitialFlat[localViewOrderD.index(i)];
+ }
- //Store the reference gradient and the gradients for this element
const auto& lFEOrderD = localViewOrderD.tree().child(0).finiteElement();
+ //Store the reference gradient and the gradients for *this element*
std::vector<FieldMatrix<double,1,dim> > referenceGradients(lFEOrderD.size());
std::vector<FieldMatrix<double,1,dim> > gradients(lFEOrderD.size());
- auto evaluateAtPoint = [&](FieldVector<double,3> pointGlobal, FieldVector<double,3> pointLocal) -> std::vector<FieldMatrix<double,dim,dim>>{
- std::vector<FieldMatrix<double,dim,dim>> stressTensors(2);
-
- const auto jacobianInverseTransposed = element.geometry().jacobianInverseTransposed(pointLocal);
-
- // Get gradients of shape functions
- lFEOrderD.localBasis().evaluateJacobian(pointLocal, referenceGradients);
+ //LocalView for the basisOrderR_
+ auto localViewOrderR = basisOrderR_.localView();
+ localViewOrderR.bind(element);
+ const auto& lFEOrderR = localViewOrderR.tree().child(0).finiteElement();
+ VectorR localConfigurationRot(lFEOrderR.size());
+ for (std::size_t i=0; i<localConfigurationRot.size(); i++)
+ localConfigurationRot[i] = rot[localViewOrderR.index(i)[0]]; //localViewOrderR.index(i) is a multiindex, its first entry is the actual index
+ typedef LocalGeodesicFEFunction<dim, double, decltype(lFEOrderR), TargetSpaceR> LocalGFEFunctionType;
+ LocalGFEFunctionType localGeodesicFEFunction(lFEOrderR,localConfigurationRot);
- // Compute gradients of Base functions
- for (size_t i=0; i<gradients.size(); ++i)
- gradients[i] = referenceGradients[i] * transpose(jacobianInverseTransposed);
+ auto evaluateAtPoint = [&](FieldVector<double,3> pointGlobal, FieldVector<double,3> pointLocal3d) -> FieldMatrix<double,dim,dim> {
+ Dune::FieldMatrix<double,dim,dim> nablaTheta;
- // Deformation gradient in vector form
- size_t nDoubles = dim*dim;
- std::vector<double> deformationGradientFlat(nDoubles);
- for (size_t i=0; i<nDoubles; i++)
- deformationGradientFlat[i] = 0;
- for (size_t i=0; i<gradients.size(); i++)
- for (size_t j=0; j<dim; j++)
- for (size_t k=0; k<dim; k++)
- deformationGradientFlat[dim*j + k] += localConfiguration[ localViewOrderD.tree().child(j).localIndex(i)]*gradients[i][0][k];
+ const auto jacobianInverseTransposed = element.geometry().jacobianInverseTransposed(pointLocal3d);
- double pureDensity = 0;
+ // Get gradients of shape functions
+ lFEOrderD.localBasis().evaluateJacobian(pointLocal3d, referenceGradients);
- trace_on(0);
+ // Compute gradients of Base functions at this element
+ for (size_t i=0; i<gradients.size(); i++)
+ gradients[i] = referenceGradients[i] * transpose(jacobianInverseTransposed);
- FieldMatrix<adouble,dim,dim> deformationGradient(0);
- for (size_t j=0; j<dim; j++)
- for (size_t k=0; k<dim; k++)
- deformationGradient[j][k] <<= deformationGradientFlat[dim*j + k];
+ // Deformation gradient - call this U_es_minus_Id already
+ FieldMatrix<double,dim,dim> U_es_minus_Id(0);
+ for (size_t i=0; i<gradients.size(); i++)
+ for (size_t j=0; j<dim; j++) {
+ U_es_minus_Id[j].axpy(localConfiguration[ localViewOrderD.tree().child(j).localIndex(i)],gradients[i][0]);
+ nablaTheta[j].axpy(localConfigurationInitial[ localViewOrderD.tree().child(j).localIndex(i)],gradients[i][0]);
+ }
- // Tape the actual calculation
- adouble density = 0;
- try {
- density = (*elasticDensity)(pointGlobal, deformationGradient);
- } catch (Exception &e) {
- trace_off(0);
- throw e;
- }
- density >>= pureDensity;
+ TargetSpaceR value = localGeodesicFEFunction.evaluate(pointLocal3d);
+ FieldMatrix<double,dim,dim> rotationMatrix(0);
+ FieldMatrix<double,dim,dim> rotationMatrixTransposed(0);
+ value.matrix(rotationMatrix);
- trace_off(0);
+ MatrixVector::transpose(rotationMatrix, rotationMatrixTransposed);
- // Compute the actual gradient
- std::vector<double> localStressFlat(nDoubles);
- gradient(0,nDoubles,deformationGradientFlat.data(),localStressFlat.data());
+ U_es_minus_Id.leftmultiply(rotationMatrixTransposed); // Attention: The rotation here is already is Q_e, we don't have to multiply with Q_0!!!
- FieldMatrix<double,dim,dim> localStress(0);
- for (size_t j=0; j<dim; j++)
- for (size_t k=0; k<dim; k++)
- localStress[j][k] = localStressFlat[dim*j + k];
+ nablaTheta.invert();
+ U_es_minus_Id.rightmultiply(nablaTheta);
- stressTensors[0] = localStress; // 1st-Piola-Kirchhoff-Stress-Tensor
+ for (size_t j = 0; j < dim; j++)
+ U_es_minus_Id[j][j] -= 1.0;
- FieldMatrix<double,dim,dim> deformationGradientTransposed(0);
- for (size_t j=0; j<dim; j++)
- for (size_t k=0; k<dim; k++)
- deformationGradient[j][k] >>= deformationGradientTransposed[k][j];
+ auto lameConstants = lameF(pointGlobal);
+ double mu = lameConstants[0];
+ double lambda = lameConstants[1];
- localStress /= deformationGradientTransposed.determinant();
- localStress = localStress * deformationGradientTransposed;
- stressTensors[1] = localStress; // Cauchy-Stress-Tensor
-
- return stressTensors;
- };
+ FieldMatrix<double,dim,dim> localStressShell(0);
+ localStressShell = 2*mu*GFE::sym(U_es_minus_Id) + 2*mu_c*GFE::skew(U_es_minus_Id);
+ for (size_t j = 0; j < dim; j++)
+ localStressShell[j][j] += lambda*GFE::trace(GFE::sym(U_es_minus_Id));
+ return localStressShell;
+ };
//Call evaluateAtPoint for all points in the quadrature rule
- const auto& quad = Dune::QuadratureRules<double, dim>::rule(element.type(), quadOrder);
- stressSubstrate1stPiolaKirchhoffTensor[elementMapper.index(element)] = 0;
- stressSubstrateCauchyTensor[elementMapper.index(element)] = 0;
+ const auto& quad = Dune::QuadratureRules<double, dim-1>::rule(it.type(), quadOrder); //Quad rule on the boundary
for (size_t pt=0; pt<quad.size(); pt++) {
- auto pointLocal = quad[pt].position();
- auto pointGlobal = element.geometry().global(pointLocal);
- auto stressTensors = evaluateAtPoint(pointGlobal, pointLocal);
- stressSubstrate1stPiolaKirchhoffTensor[elementMapper.index(element)] += stressTensors[0] * quad[pt].weight()/referenceElement(element).volume();
- stressSubstrateCauchyTensor[elementMapper.index(element)] += stressTensors[1] * quad[pt].weight()/referenceElement(element).volume();
- }
- }
- }
- /** \brief Calculate the norm of the Biot-Type-Stress-Tensor of the shell
-
- The formula for Biot-Type-Stress-Tensor of the Cosserat shell given by (4.11) in
- Ghiba, Bîrsan, Lewintan, Neff, March 2020: "The isotropic Cosserat shell model including terms up to $O(h^5)$. Part I: Derivation in matrix notation"
- \param rot Coefficient vector for the rotation
- \param x Coefficient vector for the displacement
- \param xInitial Coefficient vector for the stress-free configuration of the shell, used to calculate nablaTheta
- \param lameF Function assigning the Lamé parameters to a given point
- \param mu_c Cosserat couple modulus
- \param shellBoundary BoundaryPatch containing the elements that actually belong to the shell
- \param order Order of the quadrature rule
- \param stressShellBiotTensor Vector containing the Biot-Stress-Tensor for each element
- */
- void assembleShellStress(
- const VectorR rot,
- const VectorD x,
- const VectorD xInitial,
- const std::function<Dune::FieldVector<double,2>(Dune::FieldVector<double,dim>)> lameF,
- const double mu_c,
- const BoundaryPatch<GridView> shellBoundary,
- const int quadOrder,
- std::vector<FieldMatrix<double,dim,dim>>& stressShellBiotTensor)
- {
- std::cout << "Calculating the Frobenius norm of the Biot-Type-Stress-Tensor of the shell..." << std::endl;
- auto xFlat = Functions::istlVectorBackend(x);
- auto xInitialFlat = Functions::istlVectorBackend(xInitial);
-
- MultipleCodimMultipleGeomTypeMapper<GridView> elementMapper(basisOrderD_.gridView(),mcmgElementLayout());
- stressShellBiotTensor.resize(elementMapper.size());
-
- static constexpr auto partitionType = Partitions::interiorBorder;
- for (const auto& element : elements(basisOrderD_.gridView(), partitionType))
- {
- stressShellBiotTensor[elementMapper.index(element)] = 0;
-
- int intersectionCounter = 0;
- for (auto&& it : intersections(shellBoundary.gridView(), element)) {
- FieldMatrix<double,dim,dim> stressTensorThisIntersection(0);
-
- //Continue if the element does not intersect with the shell boundary
- if (not shellBoundary.contains(it))
- continue;
-
- //LocalView for the basisOrderD_
- auto localViewOrderD = basisOrderD_.localView();
- localViewOrderD.bind(element);
- size_t nDofsOrderD = localViewOrderD.tree().size();
-
- // Extract local configuration at this element
- std::vector<double> localConfiguration(nDofsOrderD);
- std::vector<double> localConfigurationInitial(nDofsOrderD);
- for (size_t i=0; i<nDofsOrderD; i++) {
- localConfiguration[i] = xFlat[localViewOrderD.index(i)];
- localConfigurationInitial[i] = xInitialFlat[localViewOrderD.index(i)];
- }
-
- const auto& lFEOrderD = localViewOrderD.tree().child(0).finiteElement();
- //Store the reference gradient and the gradients for *this element*
- std::vector<FieldMatrix<double,1,dim> > referenceGradients(lFEOrderD.size());
- std::vector<FieldMatrix<double,1,dim> > gradients(lFEOrderD.size());
-
- //LocalView for the basisOrderR_
- auto localViewOrderR = basisOrderR_.localView();
- localViewOrderR.bind(element);
- const auto& lFEOrderR = localViewOrderR.tree().child(0).finiteElement();
- VectorR localConfigurationRot(lFEOrderR.size());
- for (std::size_t i=0; i<localConfigurationRot.size(); i++)
- localConfigurationRot[i] = rot[localViewOrderR.index(i)[0]];//localViewOrderR.index(i) is a multiindex, its first entry is the actual index
- typedef LocalGeodesicFEFunction<dim, double, decltype(lFEOrderR), TargetSpaceR> LocalGFEFunctionType;
- LocalGFEFunctionType localGeodesicFEFunction(lFEOrderR,localConfigurationRot);
-
- auto evaluateAtPoint = [&](FieldVector<double,3> pointGlobal, FieldVector<double,3> pointLocal3d) -> FieldMatrix<double,dim,dim>{
- Dune::FieldMatrix<double,dim,dim> nablaTheta;
-
- const auto jacobianInverseTransposed = element.geometry().jacobianInverseTransposed(pointLocal3d);
-
- // Get gradients of shape functions
- lFEOrderD.localBasis().evaluateJacobian(pointLocal3d, referenceGradients);
-
- // Compute gradients of Base functions at this element
- for (size_t i=0; i<gradients.size(); i++)
- gradients[i] = referenceGradients[i] * transpose(jacobianInverseTransposed);
-
- // Deformation gradient - call this U_es_minus_Id already
- FieldMatrix<double,dim,dim> U_es_minus_Id(0);
- for (size_t i=0; i<gradients.size(); i++)
- for (size_t j=0; j<dim; j++){
- U_es_minus_Id[j].axpy(localConfiguration[ localViewOrderD.tree().child(j).localIndex(i)],gradients[i][0]);
- nablaTheta[j].axpy(localConfigurationInitial[ localViewOrderD.tree().child(j).localIndex(i)],gradients[i][0]);
- }
-
- TargetSpaceR value = localGeodesicFEFunction.evaluate(pointLocal3d);
- FieldMatrix<double,dim,dim> rotationMatrix(0);
- FieldMatrix<double,dim,dim> rotationMatrixTransposed(0);
- value.matrix(rotationMatrix);
-
- MatrixVector::transpose(rotationMatrix, rotationMatrixTransposed);
-
- U_es_minus_Id.leftmultiply(rotationMatrixTransposed); // Attention: The rotation here is already is Q_e, we don't have to multiply with Q_0!!!
-
- nablaTheta.invert();
- U_es_minus_Id.rightmultiply(nablaTheta);
-
- for (size_t j = 0; j < dim; j++)
- U_es_minus_Id[j][j] -= 1.0;
-
- auto lameConstants = lameF(pointGlobal);
- double mu = lameConstants[0];
- double lambda = lameConstants[1];
-
- FieldMatrix<double,dim,dim> localStressShell(0);
- localStressShell = 2*mu*GFE::sym(U_es_minus_Id) + 2*mu_c*GFE::skew(U_es_minus_Id);
- for (size_t j = 0; j < dim; j++)
- localStressShell[j][j] += lambda*GFE::trace(GFE::sym(U_es_minus_Id));
- return localStressShell;
- };
-
- //Call evaluateAtPoint for all points in the quadrature rule
- const auto& quad = Dune::QuadratureRules<double, dim-1>::rule(it.type(), quadOrder); //Quad rule on the boundary
-
- for (size_t pt=0; pt<quad.size(); pt++) {
- auto pointLocal2d = quad[pt].position();
- auto pointLocal3d = it.geometryInInside().global(pointLocal2d);
- auto pointGlobal = it.geometry().global(pointLocal2d);
-
- auto stressTensor = evaluateAtPoint(pointGlobal, pointLocal3d);
- stressTensorThisIntersection += stressTensor * quad[pt].weight()/referenceElement(it.inside()).volume();
- }
- stressShellBiotTensor[elementMapper.index(element)] += stressTensorThisIntersection;
- intersectionCounter++;
+ auto pointLocal2d = quad[pt].position();
+ auto pointLocal3d = it.geometryInInside().global(pointLocal2d);
+ auto pointGlobal = it.geometry().global(pointLocal2d);
+
+ auto stressTensor = evaluateAtPoint(pointGlobal, pointLocal3d);
+ stressTensorThisIntersection += stressTensor * quad[pt].weight()/referenceElement(it.inside()).volume();
}
- if (intersectionCounter >= 1)
- stressShellBiotTensor[elementMapper.index(element)] /= intersectionCounter;
+ stressShellBiotTensor[elementMapper.index(element)] += stressTensorThisIntersection;
+ intersectionCounter++;
}
+ if (intersectionCounter >= 1)
+ stressShellBiotTensor[elementMapper.index(element)] /= intersectionCounter;
}
+ }
};
}
#endif
diff --git a/dune/gfe/assemblers/weightedsumenergy.hh b/dune/gfe/assemblers/weightedsumenergy.hh
index 6fd5df3d..9f7d7179 100644
--- a/dune/gfe/assemblers/weightedsumenergy.hh
+++ b/dune/gfe/assemblers/weightedsumenergy.hh
@@ -29,7 +29,7 @@ public:
WeightedSumEnergy(std::vector<std::shared_ptr<Dune::GFE::LocalEnergy<Basis,TargetSpace> > > addends,
std::vector<double> weights)
- : addends_(addends),
+ : addends_(addends),
weights_(weights)
{}
@@ -51,4 +51,3 @@ public:
};
#endif
-
diff --git a/dune/gfe/averagedistanceassembler.hh b/dune/gfe/averagedistanceassembler.hh
index be41bba0..55fd1a33 100644
--- a/dune/gfe/averagedistanceassembler.hh
+++ b/dune/gfe/averagedistanceassembler.hh
@@ -9,92 +9,92 @@
template <class TargetSpace, class WeightType=double>
class AverageDistanceAssembler
{
- typedef typename TargetSpace::ctype ctype;
- static const int size = TargetSpace::TangentVector::dimension;
- static const int embeddedSize = TargetSpace::EmbeddedTangentVector::dimension;
+ typedef typename TargetSpace::ctype ctype;
+ static const int size = TargetSpace::TangentVector::dimension;
+ static const int embeddedSize = TargetSpace::EmbeddedTangentVector::dimension;
public:
- /** \brief Constructor with given coefficients \f$ v_i \f$ and weights \f$ w_i \f$
- */
- AverageDistanceAssembler(const std::vector<TargetSpace>& coefficients,
- const std::vector<WeightType>& weights)
- : coefficients_(coefficients),
- weights_(weights)
- {}
-
- /** \brief Constructor with given coefficients \f$ v_i \f$ and weights \f$ w_i \f$
- *
- * The weights are given as a vector of length-1 FieldVectors instead of as a
- * vector of doubles. The reason is that these weights are actually the values
- * of Lagrange shape functions, and the dune-localfunction interface returns
- * shape function values this way.
- */
- AverageDistanceAssembler(const std::vector<TargetSpace>& coefficients,
- const std::vector<Dune::FieldVector<WeightType,1> >& weights)
- : coefficients_(coefficients),
- weights_(weights.size())
- {
- for (size_t i=0; i<weights.size(); i++)
- weights_[i] = weights[i][0];
+ /** \brief Constructor with given coefficients \f$ v_i \f$ and weights \f$ w_i \f$
+ */
+ AverageDistanceAssembler(const std::vector<TargetSpace>& coefficients,
+ const std::vector<WeightType>& weights)
+ : coefficients_(coefficients),
+ weights_(weights)
+ {}
+
+ /** \brief Constructor with given coefficients \f$ v_i \f$ and weights \f$ w_i \f$
+ *
+ * The weights are given as a vector of length-1 FieldVectors instead of as a
+ * vector of doubles. The reason is that these weights are actually the values
+ * of Lagrange shape functions, and the dune-localfunction interface returns
+ * shape function values this way.
+ */
+ AverageDistanceAssembler(const std::vector<TargetSpace>& coefficients,
+ const std::vector<Dune::FieldVector<WeightType,1> >& weights)
+ : coefficients_(coefficients),
+ weights_(weights.size())
+ {
+ for (size_t i=0; i<weights.size(); i++)
+ weights_[i] = weights[i][0];
+ }
+
+ ctype value(const TargetSpace& x) const {
+
+ ctype result = 0;
+ for (size_t i=0; i<coefficients_.size(); i++) {
+ ctype dist = TargetSpace::distance(coefficients_[i], x);
+ result += weights_[i]*dist*dist;
}
- ctype value(const TargetSpace& x) const {
-
- ctype result = 0;
- for (size_t i=0; i<coefficients_.size(); i++) {
- ctype dist = TargetSpace::distance(coefficients_[i], x);
- result += weights_[i]*dist*dist;
- }
-
- return result;
- }
-
- void assembleEmbeddedGradient(const TargetSpace& x,
- typename TargetSpace::EmbeddedTangentVector& gradient) const
- {
- gradient = 0;
- for (size_t i=0; i<coefficients_.size(); i++)
- gradient.axpy(weights_[i],
- TargetSpace::derivativeOfDistanceSquaredWRTSecondArgument(coefficients_[i], x));
- }
-
- void assembleGradient(const TargetSpace& x,
- typename TargetSpace::TangentVector& gradient) const
- {
- typename TargetSpace::EmbeddedTangentVector embeddedGradient;
- assembleEmbeddedGradient(x,embeddedGradient);
-
- Dune::FieldMatrix<ctype,size,embeddedSize> orthonormalFrame = x.orthonormalFrame();
- orthonormalFrame.mv(embeddedGradient,gradient);
- }
-
- void assembleEmbeddedHessian(const TargetSpace& x,
- Dune::SymmetricMatrix<ctype,embeddedSize>& matrix) const
- {
- matrix = 0;
- for (size_t i=0; i<coefficients_.size(); i++)
- matrix.axpy(weights_[i], TargetSpace::secondDerivativeOfDistanceSquaredWRTSecondArgument(coefficients_[i], x));
- }
-
- // TODO Use a Symmetric matrix for the result
- void assembleHessian(const TargetSpace& x,
- Dune::FieldMatrix<ctype,size,size>& matrix) const
- {
- Dune::SymmetricMatrix<ctype,embeddedSize> embeddedHessian;
- assembleEmbeddedHessian(x,embeddedHessian);
-
- Dune::FieldMatrix<ctype,size,embeddedSize> frame = x.orthonormalFrame();
-
- // this is frame * embeddedHessian * frame^T
- for (int i=0; i<size; i++)
- for (int j=0; j<size; j++)
- matrix[i][j] = embeddedHessian.energyScalarProduct(frame[i], frame[j]);
- }
-
- const std::vector<TargetSpace> coefficients_;
-
- std::vector<WeightType> weights_;
+ return result;
+ }
+
+ void assembleEmbeddedGradient(const TargetSpace& x,
+ typename TargetSpace::EmbeddedTangentVector& gradient) const
+ {
+ gradient = 0;
+ for (size_t i=0; i<coefficients_.size(); i++)
+ gradient.axpy(weights_[i],
+ TargetSpace::derivativeOfDistanceSquaredWRTSecondArgument(coefficients_[i], x));
+ }
+
+ void assembleGradient(const TargetSpace& x,
+ typename TargetSpace::TangentVector& gradient) const
+ {
+ typename TargetSpace::EmbeddedTangentVector embeddedGradient;
+ assembleEmbeddedGradient(x,embeddedGradient);
+
+ Dune::FieldMatrix<ctype,size,embeddedSize> orthonormalFrame = x.orthonormalFrame();
+ orthonormalFrame.mv(embeddedGradient,gradient);
+ }
+
+ void assembleEmbeddedHessian(const TargetSpace& x,
+ Dune::SymmetricMatrix<ctype,embeddedSize>& matrix) const
+ {
+ matrix = 0;
+ for (size_t i=0; i<coefficients_.size(); i++)
+ matrix.axpy(weights_[i], TargetSpace::secondDerivativeOfDistanceSquaredWRTSecondArgument(coefficients_[i], x));
+ }
+
+ // TODO Use a Symmetric matrix for the result
+ void assembleHessian(const TargetSpace& x,
+ Dune::FieldMatrix<ctype,size,size>& matrix) const
+ {
+ Dune::SymmetricMatrix<ctype,embeddedSize> embeddedHessian;
+ assembleEmbeddedHessian(x,embeddedHessian);
+
+ Dune::FieldMatrix<ctype,size,embeddedSize> frame = x.orthonormalFrame();
+
+ // this is frame * embeddedHessian * frame^T
+ for (int i=0; i<size; i++)
+ for (int j=0; j<size; j++)
+ matrix[i][j] = embeddedHessian.energyScalarProduct(frame[i], frame[j]);
+ }
+
+ const std::vector<TargetSpace> coefficients_;
+
+ std::vector<WeightType> weights_;
};
diff --git a/dune/gfe/averageinterface.hh b/dune/gfe/averageinterface.hh
index 6022f8cd..f004c54b 100644
--- a/dune/gfe/averageinterface.hh
+++ b/dune/gfe/averageinterface.hh
@@ -32,33 +32,33 @@
template <class GridView>
class PressureAverager : public Ipopt::TNLP
{
- typedef double field_type;
+ typedef double field_type;
- typedef Dune::BCRSMatrix<Dune::FieldMatrix<double,1,1> > MatrixType;
- typedef typename MatrixType::row_type RowType;
+ typedef Dune::BCRSMatrix<Dune::FieldMatrix<double,1,1> > MatrixType;
+ typedef typename MatrixType::row_type RowType;
- constexpr static int dim = GridView::dimension;
+ constexpr static int dim = GridView::dimension;
public:
- /** \brief Constructor */
- PressureAverager(const BoundaryPatch<GridView>* patch,
- Dune::BlockVector<Dune::FieldVector<double,dim> >* result,
- const Dune::FieldVector<double,dim>& resultantForce,
- const Dune::FieldVector<double,dim>& resultantTorque,
- const Dune::BCRSMatrix<Dune::FieldMatrix<double,1,1> >* massMatrix,
- const Dune::BlockVector<Dune::FieldVector<double,1> >* nodalWeights,
- const Dune::BCRSMatrix<Dune::FieldMatrix<double,1,1> >* constraintJacobian)
- : jacobianCutoff_(1e-12), patch_(patch),
- massMatrix_(massMatrix), nodalWeights_(nodalWeights),
- constraintJacobian_(constraintJacobian), x_(result),
- resultantForce_(resultantForce), resultantTorque_(resultantTorque)
- {
- patchArea_ = patch->area();
- }
-
- /** default destructor */
- virtual ~PressureAverager() {};
+ /** \brief Constructor */
+ PressureAverager(const BoundaryPatch<GridView>* patch,
+ Dune::BlockVector<Dune::FieldVector<double,dim> >* result,
+ const Dune::FieldVector<double,dim>& resultantForce,
+ const Dune::FieldVector<double,dim>& resultantTorque,
+ const Dune::BCRSMatrix<Dune::FieldMatrix<double,1,1> >* massMatrix,
+ const Dune::BlockVector<Dune::FieldVector<double,1> >* nodalWeights,
+ const Dune::BCRSMatrix<Dune::FieldMatrix<double,1,1> >* constraintJacobian)
+ : jacobianCutoff_(1e-12), patch_(patch),
+ massMatrix_(massMatrix), nodalWeights_(nodalWeights),
+ constraintJacobian_(constraintJacobian), x_(result),
+ resultantForce_(resultantForce), resultantTorque_(resultantTorque)
+ {
+ patchArea_ = patch->area();
+ }
+
+ /** default destructor */
+ virtual ~PressureAverager() {};
/**@name Overloaded from TNLP */
//@{
@@ -107,37 +107,37 @@ public:
/** @name Solution Methods */
//@{
/** This method is called when the algorithm is complete so the TNLP can store/write the solution */
- virtual void finalize_solution(Ipopt::SolverReturn status,
+ virtual void finalize_solution(Ipopt::SolverReturn status,
Ipopt::Index n, const Ipopt::Number* x, const Ipopt::Number* z_L, const Ipopt::Number* z_U,
Ipopt::Index m, const Ipopt::Number* g, const Ipopt::Number* lambda,
Ipopt::Number obj_value,
- const Ipopt::IpoptData* ip_data,
- Ipopt::IpoptCalculatedQuantities* ip_cq);
+ const Ipopt::IpoptData* ip_data,
+ Ipopt::IpoptCalculatedQuantities* ip_cq);
//@}
- // /////////////////////////////////
- // Data
- // /////////////////////////////////
+ // /////////////////////////////////
+ // Data
+ // /////////////////////////////////
- /** \brief All entries in the constraint Jacobian smaller than the value
- here are removed. Apparently this is unnecessary though.
- */
- const double jacobianCutoff_;
+ /** \brief All entries in the constraint Jacobian smaller than the value
+ here are removed. Apparently this is unnecessary though.
+ */
+ const double jacobianCutoff_;
- const BoundaryPatch<GridView>* patch_;
+ const BoundaryPatch<GridView>* patch_;
- double patchArea_;
+ double patchArea_;
- const Dune::BCRSMatrix<Dune::FieldMatrix<double,1,1> >* massMatrix_;
+ const Dune::BCRSMatrix<Dune::FieldMatrix<double,1,1> >* massMatrix_;
- const Dune::BlockVector<Dune::FieldVector<double,1> >* nodalWeights_;
+ const Dune::BlockVector<Dune::FieldVector<double,1> >* nodalWeights_;
- const Dune::BCRSMatrix<Dune::FieldMatrix<double,1,1> >* constraintJacobian_;
+ const Dune::BCRSMatrix<Dune::FieldMatrix<double,1,1> >* constraintJacobian_;
- Dune::BlockVector<Dune::FieldVector<double,dim> >* x_;
+ Dune::BlockVector<Dune::FieldVector<double,dim> >* x_;
- Dune::FieldVector<double,dim> resultantForce_;
- Dune::FieldVector<double,dim> resultantTorque_;
+ Dune::FieldVector<double,dim> resultantForce_;
+ Dune::FieldVector<double,dim> resultantTorque_;
private:
/**@name Methods to block default compiler methods.
@@ -155,35 +155,35 @@ bool PressureAverager<GridView>::
get_nlp_info(Ipopt::Index& n, Ipopt::Index& m, Ipopt::Index& nnz_jac_g,
Ipopt::Index& nnz_h_lag, IndexStyleEnum& index_style)
{
- // One variable for each vertex on the coupling boundary, and three for the closest constant field
- n = patch_->numVertices()*dim + dim;
+ // One variable for each vertex on the coupling boundary, and three for the closest constant field
+ n = patch_->numVertices()*dim + dim;
- // prescribed total forces and moments
- m = 2*dim;
+ // prescribed total forces and moments
+ m = 2*dim;
- // number of nonzeroes in the constraint Jacobian
- // leave out the very small ones, as they create instabilities
- nnz_jac_g = 0;
- for (int i=0; i<m; i++) {
+ // number of nonzeroes in the constraint Jacobian
+ // leave out the very small ones, as they create instabilities
+ nnz_jac_g = 0;
+ for (int i=0; i<m; i++) {
- const RowType& jacobianRow = (*constraintJacobian_)[i];
+ const RowType& jacobianRow = (*constraintJacobian_)[i];
- for (typename RowType::ConstIterator cIt = jacobianRow.begin(); cIt!=jacobianRow.end(); ++cIt)
- if ( std::abs((*cIt)[0][0]) > jacobianCutoff_ )
- nnz_jac_g++;
+ for (typename RowType::ConstIterator cIt = jacobianRow.begin(); cIt!=jacobianRow.end(); ++cIt)
+ if ( std::abs((*cIt)[0][0]) > jacobianCutoff_ )
+ nnz_jac_g++;
- }
+ }
- // We only need the lower left corner of the Hessian (since it is symmetric)
- if (!massMatrix_)
- DUNE_THROW(SolverError, "No mass matrix has been supplied!");
+ // We only need the lower left corner of the Hessian (since it is symmetric)
+ if (!massMatrix_)
+ DUNE_THROW(SolverError, "No mass matrix has been supplied!");
- nnz_h_lag = 0;
+ nnz_h_lag = 0;
- // use the C style indexing (0-based)
- index_style = Ipopt::TNLP::C_STYLE;
+ // use the C style indexing (0-based)
+ index_style = Ipopt::TNLP::C_STYLE;
- return true;
+ return true;
}
@@ -193,21 +193,21 @@ bool PressureAverager<GridView>::
get_bounds_info(Ipopt::Index n, Ipopt::Number* x_l, Ipopt::Number* x_u,
Ipopt::Index m, Ipopt::Number* g_l, Ipopt::Number* g_u)
{
- // here, the n and m we gave IPOPT in get_nlp_info are passed back to us.
- // If desired, we could assert to make sure they are what we think they are.
- //assert(n == x_->dim());
- //assert(m == 0);
-
- // Be on the safe side: unset all variable bounds
- for (int i=0; i<n; i++) {
- x_l[i] = -std::numeric_limits<double>::max();
- x_u[i] = std::numeric_limits<double>::max();
- }
-
- for (int i=0; i<dim; i++) {
- g_l[i] = g_u[i] = resultantForce_[i];
- g_l[i+dim] = g_u[i+dim] = resultantTorque_[i];
- }
+ // here, the n and m we gave IPOPT in get_nlp_info are passed back to us.
+ // If desired, we could assert to make sure they are what we think they are.
+ //assert(n == x_->dim());
+ //assert(m == 0);
+
+ // Be on the safe side: unset all variable bounds
+ for (int i=0; i<n; i++) {
+ x_l[i] = -std::numeric_limits<double>::max();
+ x_u[i] = std::numeric_limits<double>::max();
+ }
+
+ for (int i=0; i<dim; i++) {
+ g_l[i] = g_u[i] = resultantForce_[i];
+ g_l[i+dim] = g_u[i+dim] = resultantTorque_[i];
+ }
return true;
}
@@ -219,19 +219,19 @@ get_starting_point(Ipopt::Index n, bool init_x, Ipopt::Number* x,
bool init_z, Ipopt::Number* z_L, Ipopt::Number* z_U,
Ipopt::Index m, bool init_lambda, Ipopt::Number* lambda)
{
- // Here, we assume we only have starting values for x, if you code
- // your own NLP, you can provide starting values for the dual variables
- // if you wish
- assert(init_x == true);
- assert(init_z == false);
- assert(init_lambda == false);
-
- // initialize to the given starting point
- for (int i=0; i<n/dim; i++)
- for (int j=0; j<dim; j++)
- x[i*dim+j] = resultantForce_[j]/patchArea_;
+ // Here, we assume we only have starting values for x, if you code
+ // your own NLP, you can provide starting values for the dual variables
+ // if you wish
+ assert(init_x == true);
+ assert(init_z == false);
+ assert(init_lambda == false);
+
+ // initialize to the given starting point
+ for (int i=0; i<n/dim; i++)
+ for (int j=0; j<dim; j++)
+ x[i*dim+j] = resultantForce_[j]/patchArea_;
- return true;
+ return true;
}
// returns the value of the objective function
@@ -239,34 +239,34 @@ template <class GridView>
bool PressureAverager<GridView>::
eval_f(Ipopt::Index n, const Ipopt::Number* x, bool new_x, Ipopt::Number& obj_value)
{
- // Init return value
- obj_value = 0;
+ // Init return value
+ obj_value = 0;
- ////////////////////////////////////
- // Compute x^T*A*x
- ////////////////////////////////////
+ ////////////////////////////////////
+ // Compute x^T*A*x
+ ////////////////////////////////////
- for (int rowIdx=0; rowIdx<massMatrix_->N(); rowIdx++) {
+ for (int rowIdx=0; rowIdx<massMatrix_->N(); rowIdx++) {
- const typename MatrixType::row_type& row = (*massMatrix_)[rowIdx];
+ const typename MatrixType::row_type& row = (*massMatrix_)[rowIdx];
- typename MatrixType::row_type::ConstIterator cIt = row.begin();
- typename MatrixType::row_type::ConstIterator cEndIt = row.end();
+ typename MatrixType::row_type::ConstIterator cIt = row.begin();
+ typename MatrixType::row_type::ConstIterator cEndIt = row.end();
- for (; cIt!=cEndIt; ++cIt)
- for (int i=0; i<dim; i++)
- obj_value += x[dim*rowIdx+i] * x[dim*cIt.index()+i] * (*cIt)[0][0];
+ for (; cIt!=cEndIt; ++cIt)
+ for (int i=0; i<dim; i++)
+ obj_value += x[dim*rowIdx+i] * x[dim*cIt.index()+i] * (*cIt)[0][0];
- }
+ }
- //
- for (int i=0; i<nodalWeights_->size(); i++)
- for (int j=0; j<dim; j++)
- obj_value -= 2 * x[n-dim + j] * x[i*dim+j] * (*nodalWeights_)[i];
+ //
+ for (int i=0; i<nodalWeights_->size(); i++)
+ for (int j=0; j<dim; j++)
+ obj_value -= 2 * x[n-dim + j] * x[i*dim+j] * (*nodalWeights_)[i];
- // += c^2 * \int 1 ds
- for (int i=0; i<dim; i++)
- obj_value += patchArea_ * (x[n-dim + i] * x[n-dim + i]);
+ // += c^2 * \int 1 ds
+ for (int i=0; i<dim; i++)
+ obj_value += patchArea_ * (x[n-dim + i] * x[n-dim + i]);
return true;
}
@@ -276,41 +276,41 @@ template <class GridView>
bool PressureAverager<GridView>::
eval_grad_f(Ipopt::Index n, const Ipopt::Number* x, bool new_x, Ipopt::Number* grad_f)
{
- //std::cout << "### eval_grad_f ###" << std::endl;
+ //std::cout << "### eval_grad_f ###" << std::endl;
- // \nabla J = A(x,.) - b(x)
- for (int i=0; i<n; i++)
- grad_f[i] = 0;
+ // \nabla J = A(x,.) - b(x)
+ for (int i=0; i<n; i++)
+ grad_f[i] = 0;
- for (int i=0; i<massMatrix_->N(); i++) {
+ for (int i=0; i<massMatrix_->N(); i++) {
- const typename MatrixType::row_type& row = (*massMatrix_)[i];
+ const typename MatrixType::row_type& row = (*massMatrix_)[i];
- typename MatrixType::row_type::ConstIterator cIt = row.begin();
- typename MatrixType::row_type::ConstIterator cEndIt = row.end();
+ typename MatrixType::row_type::ConstIterator cIt = row.begin();
+ typename MatrixType::row_type::ConstIterator cEndIt = row.end();
- for (; cIt!=cEndIt; ++cIt)
- for (int j=0; j<dim; j++)
- grad_f[i*dim+j] += 2 * (*cIt)[0][0] * x[cIt.index()*dim+j];
+ for (; cIt!=cEndIt; ++cIt)
+ for (int j=0; j<dim; j++)
+ grad_f[i*dim+j] += 2 * (*cIt)[0][0] * x[cIt.index()*dim+j];
- for (int j=0; j<dim; j++)
- grad_f[i*dim+j] -= 2 * x[n-dim+j] * (*nodalWeights_)[i];
+ for (int j=0; j<dim; j++)
+ grad_f[i*dim+j] -= 2 * x[n-dim+j] * (*nodalWeights_)[i];
- }
+ }
- for (int i=0; i<dim; i++) {
+ for (int i=0; i<dim; i++) {
- for (int j=0; j<nodalWeights_->size(); j++)
- grad_f[n-dim+i] -= 2* (*nodalWeights_)[j]*x[j*dim+i];
+ for (int j=0; j<nodalWeights_->size(); j++)
+ grad_f[n-dim+i] -= 2* (*nodalWeights_)[j]*x[j*dim+i];
- grad_f[n-dim+i] += 2*x[n-dim+i]*patchArea_;
+ grad_f[n-dim+i] += 2*x[n-dim+i]*patchArea_;
- }
+ }
-// for (int i=0; i<n; i++) {
-// std::cout << "x = " << x[i] << std::endl;
-// std::cout << "grad = " << grad_f[i] << std::endl;
-// }
+ // for (int i=0; i<n; i++) {
+ // std::cout << "x = " << x[i] << std::endl;
+ // std::cout << "grad = " << grad_f[i] << std::endl;
+ // }
return true;
}
@@ -320,23 +320,23 @@ template <class GridView>
bool PressureAverager<GridView>::
eval_g(Ipopt::Index n, const Ipopt::Number* x, bool new_x, Ipopt::Index m, Ipopt::Number* g)
{
- for (int i=0; i<m; i++) {
+ for (int i=0; i<m; i++) {
- // init
- g[i] = 0;
+ // init
+ g[i] = 0;
- const RowType& jacobianRow = (*constraintJacobian_)[i];
+ const RowType& jacobianRow = (*constraintJacobian_)[i];
- for (typename RowType::ConstIterator cIt = jacobianRow.begin(); cIt!=jacobianRow.end(); ++cIt)
- if ( std::abs((*cIt)[0][0]) > jacobianCutoff_ ) {
- //printf("adding %g times %g\n", (*cIt)[0][0], x[cIt.index()]);
- g[i] += (*cIt)[0][0] * x[cIt.index()];
- }
+ for (typename RowType::ConstIterator cIt = jacobianRow.begin(); cIt!=jacobianRow.end(); ++cIt)
+ if ( std::abs((*cIt)[0][0]) > jacobianCutoff_ ) {
+ //printf("adding %g times %g\n", (*cIt)[0][0], x[cIt.index()]);
+ g[i] += (*cIt)[0][0] * x[cIt.index()];
+ }
- }
+ }
-// for (int i=0; i<m; i++)
-// std::cout << "g[" << i << "]: " << g[i] << std::endl;
+ // for (int i=0; i<m; i++)
+ // std::cout << "g[" << i << "]: " << g[i] << std::endl;
return true;
}
@@ -348,41 +348,41 @@ eval_jac_g(Ipopt::Index n, const Ipopt::Number* x, bool new_x,
Ipopt::Index m, Ipopt::Index nele_jac, Ipopt::Index* iRow, Ipopt::Index *jCol,
Ipopt::Number* values)
{
- int idx = 0;
+ int idx = 0;
- if (values==NULL) {
+ if (values==NULL) {
- for (int i=0; i<m; i++) {
-
- const RowType& jacobianRow = (*constraintJacobian_)[i];
+ for (int i=0; i<m; i++) {
- for (typename RowType::ConstIterator cIt = jacobianRow.begin(); cIt!=jacobianRow.end(); ++cIt) {
- if ( std::abs((*cIt)[0][0]) > jacobianCutoff_ ) {
- iRow[idx] = i;
- jCol[idx] = cIt.index();
- idx++;
- }
- }
+ const RowType& jacobianRow = (*constraintJacobian_)[i];
+ for (typename RowType::ConstIterator cIt = jacobianRow.begin(); cIt!=jacobianRow.end(); ++cIt) {
+ if ( std::abs((*cIt)[0][0]) > jacobianCutoff_ ) {
+ iRow[idx] = i;
+ jCol[idx] = cIt.index();
+ idx++;
}
+ }
- } else {
+ }
- for (int i=0; i<m; i++) {
+ } else {
- const RowType& jacobianRow = (*constraintJacobian_)[i];
+ for (int i=0; i<m; i++) {
- for (typename RowType::ConstIterator cIt = jacobianRow.begin(); cIt!=jacobianRow.end(); ++cIt)
- if ( std::abs((*cIt)[0][0]) > jacobianCutoff_ )
- values[idx++] = (*cIt)[0][0];
+ const RowType& jacobianRow = (*constraintJacobian_)[i];
- }
+ for (typename RowType::ConstIterator cIt = jacobianRow.begin(); cIt!=jacobianRow.end(); ++cIt)
+ if ( std::abs((*cIt)[0][0]) > jacobianCutoff_ )
+ values[idx++] = (*cIt)[0][0];
+
+ }
- }
+ }
- return true;
+ return true;
}
//return the structure or values of the hessian
@@ -393,8 +393,8 @@ eval_h(Ipopt::Index n, const Ipopt::Number* x, bool new_x,
bool new_lambda, Ipopt::Index nele_hess, Ipopt::Index* iRow,
Ipopt::Index* jCol, Ipopt::Number* values)
{
- // We are using a quasi-Hessian approximation
- return false;
+ // We are using a quasi-Hessian approximation
+ return false;
}
template <class GridView>
@@ -406,50 +406,50 @@ finalize_solution(Ipopt::SolverReturn status,
const Ipopt::IpoptData* ip_data,
Ipopt::IpoptCalculatedQuantities* ip_cq)
{
- x_->resize(patch_->numVertices());
+ x_->resize(patch_->numVertices());
- for (int i=0; i<x_->size(); i++)
- for (int j=0; j<dim; j++)
- (*x_)[i][j] = x[i*dim+j];
+ for (int i=0; i<x_->size(); i++)
+ for (int j=0; j<dim; j++)
+ (*x_)[i][j] = x[i*dim+j];
}
template <class GridView>
void weakToStrongBoundaryStress(const BoundaryPatch<GridView>& boundary,
- const Dune::BlockVector<Dune::FieldVector<double, GridView::dimension> >& weakBoundaryStress,
- Dune::BlockVector<Dune::FieldVector<double, GridView::dimension> >& strongBoundaryStress)
+ const Dune::BlockVector<Dune::FieldVector<double, GridView::dimension> >& weakBoundaryStress,
+ Dune::BlockVector<Dune::FieldVector<double, GridView::dimension> >& strongBoundaryStress)
{
- static const int dim = GridView::dimension;
- typedef Dune::BCRSMatrix<Dune::FieldMatrix<double,dim,dim> > MatrixType;
- typedef Dune::BlockVector<Dune::FieldVector<double,dim> > VectorType;
-
- // turn residual (== weak form of the Neumann forces) to the strong form
- MatrixType surfaceMassMatrix;
- assembleSurfaceMassMatrix(boundary, surfaceMassMatrix);
-
- std::vector<int> globalToLocal;
- boundary.makeGlobalToLocal(globalToLocal);
- VectorType localWeakBoundaryStress(surfaceMassMatrix.N());
- assert(globalToLocal.size()==weakBoundaryStress.size());
- for (int i=0; i<globalToLocal.size(); i++)
- if (globalToLocal[i] >= 0)
- localWeakBoundaryStress[globalToLocal[i]] = weakBoundaryStress[i];
-
- VectorType localStrongBoundaryStress(surfaceMassMatrix.N());
- localStrongBoundaryStress = 0;
-
- // solve with a cg solver
- Dune::MatrixAdapter<MatrixType,VectorType,VectorType> op(surfaceMassMatrix);
- Dune::SeqILU0<MatrixType,VectorType,VectorType> ilu0(surfaceMassMatrix,1.0);
- Dune::CGSolver<VectorType> cg(op,ilu0,1E-4,100,0);
- Dune::InverseOperatorResult statistics;
- cg.apply(localStrongBoundaryStress, localWeakBoundaryStress, statistics);
-
- VectorType neumannForces(weakBoundaryStress.size());
- neumannForces = 0;
- for (int i=0; i<globalToLocal.size(); i++)
- if (globalToLocal[i] >= 0)
- strongBoundaryStress[i] = localStrongBoundaryStress[globalToLocal[i]];
+ static const int dim = GridView::dimension;
+ typedef Dune::BCRSMatrix<Dune::FieldMatrix<double,dim,dim> > MatrixType;
+ typedef Dune::BlockVector<Dune::FieldVector<double,dim> > VectorType;
+
+ // turn residual (== weak form of the Neumann forces) to the strong form
+ MatrixType surfaceMassMatrix;
+ assembleSurfaceMassMatrix(boundary, surfaceMassMatrix);
+
+ std::vector<int> globalToLocal;
+ boundary.makeGlobalToLocal(globalToLocal);
+ VectorType localWeakBoundaryStress(surfaceMassMatrix.N());
+ assert(globalToLocal.size()==weakBoundaryStress.size());
+ for (int i=0; i<globalToLocal.size(); i++)
+ if (globalToLocal[i] >= 0)
+ localWeakBoundaryStress[globalToLocal[i]] = weakBoundaryStress[i];
+
+ VectorType localStrongBoundaryStress(surfaceMassMatrix.N());
+ localStrongBoundaryStress = 0;
+
+ // solve with a cg solver
+ Dune::MatrixAdapter<MatrixType,VectorType,VectorType> op(surfaceMassMatrix);
+ Dune::SeqILU0<MatrixType,VectorType,VectorType> ilu0(surfaceMassMatrix,1.0);
+ Dune::CGSolver<VectorType> cg(op,ilu0,1E-4,100,0);
+ Dune::InverseOperatorResult statistics;
+ cg.apply(localStrongBoundaryStress, localWeakBoundaryStress, statistics);
+
+ VectorType neumannForces(weakBoundaryStress.size());
+ neumannForces = 0;
+ for (int i=0; i<globalToLocal.size(); i++)
+ if (globalToLocal[i] >= 0)
+ strongBoundaryStress[i] = localStrongBoundaryStress[globalToLocal[i]];
}
@@ -461,54 +461,54 @@ void computeTotalForceAndTorque(const BoundaryPatch<GridView>& interface,
const Dune::FieldVector<double,3>& center,
Dune::FieldVector<double,3>& totalForce, Dune::FieldVector<double,3>& totalTorque)
{
- const int dim = GridView::dimension;
-
- // ///////////////////////////////////////////
- // Initialize output configuration
- // ///////////////////////////////////////////
- totalForce = 0;
- totalTorque = 0;
+ const int dim = GridView::dimension;
- ////////////////////////////////////////////////////////////////
- // Interpret the Neumann value coefficients as a P1 function
- ////////////////////////////////////////////////////////////////
- typedef P1NodalBasis<GridView,double> P1Basis;
- P1Basis p1Basis(interface.gridView());
- BasisGridFunction<P1Basis, Dune::BlockVector<Dune::FieldVector<double, GridView::dimension> > > neumannFunction(p1Basis, boundaryStress);
+ // ///////////////////////////////////////////
+ // Initialize output configuration
+ // ///////////////////////////////////////////
+ totalForce = 0;
+ totalTorque = 0;
- // ///////////////////////////////////////////
- // Loop and integrate over the interface
- // ///////////////////////////////////////////
+ ////////////////////////////////////////////////////////////////
+ // Interpret the Neumann value coefficients as a P1 function
+ ////////////////////////////////////////////////////////////////
+ typedef P1NodalBasis<GridView,double> P1Basis;
+ P1Basis p1Basis(interface.gridView());
+ BasisGridFunction<P1Basis, Dune::BlockVector<Dune::FieldVector<double, GridView::dimension> > > neumannFunction(p1Basis, boundaryStress);
- typename BoundaryPatch<GridView>::iterator it = interface.begin();
- typename BoundaryPatch<GridView>::iterator endIt = interface.end();
+ // ///////////////////////////////////////////
+ // Loop and integrate over the interface
+ // ///////////////////////////////////////////
- for (; it!=endIt; ++it) {
+ typename BoundaryPatch<GridView>::iterator it = interface.begin();
+ typename BoundaryPatch<GridView>::iterator endIt = interface.end();
- const typename BoundaryPatch<GridView>::iterator::Intersection::Geometry& segmentGeometry = it->geometry();
+ for (; it!=endIt; ++it) {
- // Get quadrature rule
- const Dune::QuadratureRule<double, dim-1>& quad = Dune::QuadratureRules<double, dim-1>::rule(segmentGeometry.type(), dim-1);
+ const typename BoundaryPatch<GridView>::iterator::Intersection::Geometry& segmentGeometry = it->geometry();
- /* Loop over all integration points */
- for (size_t ip=0; ip<quad.size(); ip++) {
+ // Get quadrature rule
+ const Dune::QuadratureRule<double, dim-1>& quad = Dune::QuadratureRules<double, dim-1>::rule(segmentGeometry.type(), dim-1);
- // Local position of the quadrature point
- const Dune::FieldVector<double,dim> quadPos = it->geometryInInside().global(quad[ip].position());
- const Dune::FieldVector<double,dim> worldPos = it->geometry().global(quad[ip].position());
+ /* Loop over all integration points */
+ for (size_t ip=0; ip<quad.size(); ip++) {
- const double integrationElement = segmentGeometry.integrationElement(quad[ip].position());
+ // Local position of the quadrature point
+ const Dune::FieldVector<double,dim> quadPos = it->geometryInInside().global(quad[ip].position());
+ const Dune::FieldVector<double,dim> worldPos = it->geometry().global(quad[ip].position());
- Dune::FieldVector<double,dim> value;
- neumannFunction.evaluateLocal(*it->inside(), quadPos, value);
+ const double integrationElement = segmentGeometry.integrationElement(quad[ip].position());
- totalForce.axpy(quad[ip].weight() * integrationElement, value);
- totalTorque.axpy(quad[ip].weight() * integrationElement, MatrixVector::crossProduct(worldPos-center,value));
+ Dune::FieldVector<double,dim> value;
+ neumannFunction.evaluateLocal(*it->inside(), quadPos, value);
- }
+ totalForce.axpy(quad[ip].weight() * integrationElement, value);
+ totalTorque.axpy(quad[ip].weight() * integrationElement, MatrixVector::crossProduct(worldPos-center,value));
}
+ }
+
}
@@ -520,196 +520,196 @@ void computeAveragePressure(const typename RigidBodyMotion<double,GridView::dime
const Dune::FieldVector<double,GridView::dimension>& centerOfTorque,
Dune::BlockVector<Dune::FieldVector<double, GridView::dimension> >& pressure)
{
- const GridView& gridView = interface.gridView();
- const typename GridView::IndexSet& indexSet = gridView.indexSet();
- const int dim = GridView::dimension;
- typedef double field_type;
-
- Dune::LagrangeLocalFiniteElementCache<double,double, dim, 1> finiteElementCache;
-
- // Create the matrix of constraints
- Dune::BCRSMatrix<Dune::FieldMatrix<field_type,1,1> > constraints(2*dim, dim*interface.numVertices(),
- Dune::BCRSMatrix<Dune::FieldMatrix<double,1,1> >::random);
-
- for (int i=0; i<dim; i++) {
- constraints.setrowsize(i, interface.numVertices());
- constraints.setrowsize(i+dim, dim*interface.numVertices());
- }
-
- constraints.endrowsizes();
-
- for (int i=0; i<dim; i++)
- for (int j=0; j<interface.numVertices(); j++)
- constraints.addindex(i, dim*j+i);
-
- for (int i=0; i<dim; i++)
- for (int j=0; j<dim*interface.numVertices(); j++)
- constraints.addindex(i+dim, j);
+ const GridView& gridView = interface.gridView();
+ const typename GridView::IndexSet& indexSet = gridView.indexSet();
+ const int dim = GridView::dimension;
+ typedef double field_type;
- constraints.endindices();
+ Dune::LagrangeLocalFiniteElementCache<double,double, dim, 1> finiteElementCache;
- constraints = 0;
+ // Create the matrix of constraints
+ Dune::BCRSMatrix<Dune::FieldMatrix<field_type,1,1> > constraints(2*dim, dim*interface.numVertices(),
+ Dune::BCRSMatrix<Dune::FieldMatrix<double,1,1> >::random);
- // Create the surface mass matrix
- Dune::BCRSMatrix<Dune::FieldMatrix<field_type,1,1> > massMatrix;
- assembleSurfaceMassMatrix<GridView, 1>(interface, massMatrix);
+ for (int i=0; i<dim; i++) {
+ constraints.setrowsize(i, interface.numVertices());
+ constraints.setrowsize(i+dim, dim*interface.numVertices());
+ }
- // Make global-to-local array
- std::vector<int> globalToLocal;
- interface.makeGlobalToLocal(globalToLocal);
+ constraints.endrowsizes();
- // Make array of nodal weights
- Dune::BlockVector<Dune::FieldVector<double,1> > nodalWeights(interface.numVertices());
- nodalWeights = 0;
+ for (int i=0; i<dim; i++)
+ for (int j=0; j<interface.numVertices(); j++)
+ constraints.addindex(i, dim*j+i);
- typename BoundaryPatch<GridView>::iterator it = interface.begin();
- typename BoundaryPatch<GridView>::iterator endIt = interface.end();
+ for (int i=0; i<dim; i++)
+ for (int j=0; j<dim*interface.numVertices(); j++)
+ constraints.addindex(i+dim, j);
- for (; it!=endIt; ++it) {
+ constraints.endindices();
- // Get shape functions
- const typename Dune::LagrangeLocalFiniteElementCache<double,double, dim, 1>::FiniteElementType&
- localFiniteElement = finiteElementCache.get(it->inside()->type());
+ constraints = 0;
- const Dune::ReferenceElement<double,dim>& refElement = Dune::ReferenceElements<double, dim>::general(it->inside()->type());
+ // Create the surface mass matrix
+ Dune::BCRSMatrix<Dune::FieldMatrix<field_type,1,1> > massMatrix;
+ assembleSurfaceMassMatrix<GridView, 1>(interface, massMatrix);
- // four rows because a face may have no more than four vertices
- Dune::FieldVector<double,4> mu(0);
- Dune::FieldVector<double,3> mu_tilde[4][3];
+ // Make global-to-local array
+ std::vector<int> globalToLocal;
+ interface.makeGlobalToLocal(globalToLocal);
- for (int i=0; i<4; i++)
- for (int j=0; j<3; j++)
- mu_tilde[i][j] = 0;
+ // Make array of nodal weights
+ Dune::BlockVector<Dune::FieldVector<double,1> > nodalWeights(interface.numVertices());
+ nodalWeights = 0;
- for (int i=0; i<it->geometry().corners(); i++) {
+ typename BoundaryPatch<GridView>::iterator it = interface.begin();
+ typename BoundaryPatch<GridView>::iterator endIt = interface.end();
- const Dune::QuadratureRule<double, dim-1>& quad
- = Dune::QuadratureRules<double, dim-1>::rule(it->type(), dim-1);
+ for (; it!=endIt; ++it) {
- for (size_t qp=0; qp<quad.size(); qp++) {
+ // Get shape functions
+ const typename Dune::LagrangeLocalFiniteElementCache<double,double, dim, 1>::FiniteElementType&
+ localFiniteElement = finiteElementCache.get(it->inside()->type());
- // Local position of the quadrature point
- const Dune::FieldVector<double,dim>& quadPos = it->geometryInInside().global(quad[qp].position());
+ const Dune::ReferenceElement<double,dim>& refElement = Dune::ReferenceElements<double, dim>::general(it->inside()->type());
- const double integrationElement = it->geometry().integrationElement(quad[qp].position());
+ // four rows because a face may have no more than four vertices
+ Dune::FieldVector<double,4> mu(0);
+ Dune::FieldVector<double,3> mu_tilde[4][3];
- std::vector<Dune::FieldVector<double,1> > shapeFunctionValues;
- localFiniteElement.localBasis().evaluateFunction(quadPos, shapeFunctionValues);
+ for (int i=0; i<4; i++)
+ for (int j=0; j<3; j++)
+ mu_tilde[i][j] = 0;
- // \mu_i = \int_t \varphi_i \ds
- int indexInFace = refElement.subEntity(it->indexInInside(), 1, i, dim);
- mu[i] += quad[qp].weight() * integrationElement * shapeFunctionValues[indexInFace];
+ for (int i=0; i<it->geometry().corners(); i++) {
- // \tilde{\mu}_i^j = \int_t (x - x_0) \times \varphi_i \ds
- Dune::FieldVector<double,dim> worldPos = it->geometry().global(quad[qp].position());
+ const Dune::QuadratureRule<double, dim-1>& quad
+ = Dune::QuadratureRules<double, dim-1>::rule(it->type(), dim-1);
- for (int j=0; j<dim; j++) {
+ for (size_t qp=0; qp<quad.size(); qp++) {
- // Vector-valued basis function
- Dune::FieldVector<double,dim> phi_i(0);
- phi_i[j] = shapeFunctionValues[indexInFace];
+ // Local position of the quadrature point
+ const Dune::FieldVector<double,dim>& quadPos = it->geometryInInside().global(quad[qp].position());
- mu_tilde[i][j].axpy(quad[qp].weight() * integrationElement,
- Arithmetic::crossProduct(Dune::FieldVector<double,dim>(worldPos-centerOfTorque), phi_i));
+ const double integrationElement = it->geometry().integrationElement(quad[qp].position());
- }
+ std::vector<Dune::FieldVector<double,1> > shapeFunctionValues;
+ localFiniteElement.localBasis().evaluateFunction(quadPos, shapeFunctionValues);
- }
+ // \mu_i = \int_t \varphi_i \ds
+ int indexInFace = refElement.subEntity(it->indexInInside(), 1, i, dim);
+ mu[i] += quad[qp].weight() * integrationElement * shapeFunctionValues[indexInFace];
- }
+ // \tilde{\mu}_i^j = \int_t (x - x_0) \times \varphi_i \ds
+ Dune::FieldVector<double,dim> worldPos = it->geometry().global(quad[qp].position());
- // Set up matrix
- for (int i=0; i<refElement.size(it->indexInInside(),1,dim); i++) {
+ for (int j=0; j<dim; j++) {
- int faceIdxi = refElement.subEntity(it->indexInInside(), 1, i, dim);
- int subIndex = globalToLocal[indexSet.subIndex(*it->inside(), faceIdxi, dim)];
+ // Vector-valued basis function
+ Dune::FieldVector<double,dim> phi_i(0);
+ phi_i[j] = shapeFunctionValues[indexInFace];
- nodalWeights[subIndex] += mu[i];
- for (int j=0; j<dim; j++)
- constraints[j][subIndex*dim+j] += mu[i];
+ mu_tilde[i][j].axpy(quad[qp].weight() * integrationElement,
+ Arithmetic::crossProduct(Dune::FieldVector<double,dim>(worldPos-centerOfTorque), phi_i));
- for (int j=0; j<3; j++)
- for (int k=0; k<3; k++)
- constraints[dim+k][dim*subIndex+j] += mu_tilde[i][j][k];
-
- }
-
- }
-
- //printmatrix(std::cout, constraints, "jacobian", "--");
- //printmatrix(std::cout, massMatrix, "mass", "--");
-
- // /////////////////////////////////////////////////////////////////////////////////////
- // Set up and start the interior-point solver
- // /////////////////////////////////////////////////////////////////////////////////////
+ }
- Dune::FieldVector<double,dim> resultantForce, resultantTorque;
- for (int i=0; i<dim; i++) {
- resultantForce[i] = resultantForceTorque[i];
- resultantTorque[i] = resultantForceTorque[dim+i];
- }
+ }
- // Create a new instance of IpoptApplication
- Ipopt::SmartPtr<Ipopt::IpoptApplication> app = new Ipopt::IpoptApplication();
-
- // Change some options
- app->Options()->SetNumericValue("tol", 1e-8);
- app->Options()->SetIntegerValue("max_iter", 1000);
- app->Options()->SetStringValue("mu_strategy", "adaptive");
- app->Options()->SetStringValue("output_file", "ipopt.out");
- app->Options()->SetStringValue("hessian_approximation", "limited-memory");
- app->Options()->SetStringValue("jac_c_constant", "yes");
- app->Options()->SetIntegerValue("print_level", 0);
-
- // Initialize the IpoptApplication and process the options
- Ipopt::ApplicationReturnStatus status;
- status = app->Initialize();
- if (status != Ipopt::Solve_Succeeded)
- DUNE_THROW(SolverError, "Error during IPOpt initialization!");
-
- // Ask Ipopt to solve the problem
- Dune::BlockVector<Dune::FieldVector<double,dim> > localPressure;
- Ipopt::SmartPtr<Ipopt::TNLP> defectSolverSmart = new PressureAverager<GridView>(&interface,
- &localPressure,
- resultantForce,
- resultantTorque,
- &massMatrix,
- &nodalWeights,
- &constraints);
- status = app->OptimizeTNLP(defectSolverSmart);
-
- if (status != Ipopt::Solve_Succeeded
- && status != Ipopt::Solved_To_Acceptable_Level) {
- //DUNE_THROW(SolverError, "Solving the defect problem failed!");
- std::cout << "IPOpt returned error code " << status << "!" << std::endl;
}
- // //////////////////////////////////////////////////////////////////////////////
- // Get result
- // //////////////////////////////////////////////////////////////////////////////
+ // Set up matrix
+ for (int i=0; i<refElement.size(it->indexInInside(),1,dim); i++) {
- // set up output array
- pressure.resize(indexSet.size(dim));
- pressure = 0;
+ int faceIdxi = refElement.subEntity(it->indexInInside(), 1, i, dim);
+ int subIndex = globalToLocal[indexSet.subIndex(*it->inside(), faceIdxi, dim)];
- for (size_t i=0; i<globalToLocal.size(); i++)
- if (globalToLocal[i]>=0)
- pressure[i] = localPressure[globalToLocal[i]];
+ nodalWeights[subIndex] += mu[i];
+ for (int j=0; j<dim; j++)
+ constraints[j][subIndex*dim+j] += mu[i];
- // /////////////////////////////////////////////////////////////////////////////////////
- // Compute the overall force and torque to see whether the preceding code is correct
- // /////////////////////////////////////////////////////////////////////////////////////
+ for (int j=0; j<3; j++)
+ for (int k=0; k<3; k++)
+ constraints[dim+k][dim*subIndex+j] += mu_tilde[i][j][k];
- Dune::FieldVector<double,3> outputForce(0), outputTorque(0);
-
- computeTotalForceAndTorque(interface, pressure, centerOfTorque, outputForce, outputTorque);
+ }
- outputForce -= resultantForce;
- outputTorque -= resultantTorque;
- assert( outputForce.infinity_norm() < 1e-6 );
- assert( outputTorque.infinity_norm() < 1e-6 );
-// std::cout << "Output force: " << outputForce << std::endl;
-// std::cout << "Output torque: " << outputTorque << " " << resultantTorque[0]/outputTorque[0] << std::endl;
+ }
+
+ //printmatrix(std::cout, constraints, "jacobian", "--");
+ //printmatrix(std::cout, massMatrix, "mass", "--");
+
+ // /////////////////////////////////////////////////////////////////////////////////////
+ // Set up and start the interior-point solver
+ // /////////////////////////////////////////////////////////////////////////////////////
+
+ Dune::FieldVector<double,dim> resultantForce, resultantTorque;
+ for (int i=0; i<dim; i++) {
+ resultantForce[i] = resultantForceTorque[i];
+ resultantTorque[i] = resultantForceTorque[dim+i];
+ }
+
+ // Create a new instance of IpoptApplication
+ Ipopt::SmartPtr<Ipopt::IpoptApplication> app = new Ipopt::IpoptApplication();
+
+ // Change some options
+ app->Options()->SetNumericValue("tol", 1e-8);
+ app->Options()->SetIntegerValue("max_iter", 1000);
+ app->Options()->SetStringValue("mu_strategy", "adaptive");
+ app->Options()->SetStringValue("output_file", "ipopt.out");
+ app->Options()->SetStringValue("hessian_approximation", "limited-memory");
+ app->Options()->SetStringValue("jac_c_constant", "yes");
+ app->Options()->SetIntegerValue("print_level", 0);
+
+ // Initialize the IpoptApplication and process the options
+ Ipopt::ApplicationReturnStatus status;
+ status = app->Initialize();
+ if (status != Ipopt::Solve_Succeeded)
+ DUNE_THROW(SolverError, "Error during IPOpt initialization!");
+
+ // Ask Ipopt to solve the problem
+ Dune::BlockVector<Dune::FieldVector<double,dim> > localPressure;
+ Ipopt::SmartPtr<Ipopt::TNLP> defectSolverSmart = new PressureAverager<GridView>(&interface,
+ &localPressure,
+ resultantForce,
+ resultantTorque,
+ &massMatrix,
+ &nodalWeights,
+ &constraints);
+ status = app->OptimizeTNLP(defectSolverSmart);
+
+ if (status != Ipopt::Solve_Succeeded
+ && status != Ipopt::Solved_To_Acceptable_Level) {
+ //DUNE_THROW(SolverError, "Solving the defect problem failed!");
+ std::cout << "IPOpt returned error code " << status << "!" << std::endl;
+ }
+
+ // //////////////////////////////////////////////////////////////////////////////
+ // Get result
+ // //////////////////////////////////////////////////////////////////////////////
+
+ // set up output array
+ pressure.resize(indexSet.size(dim));
+ pressure = 0;
+
+ for (size_t i=0; i<globalToLocal.size(); i++)
+ if (globalToLocal[i]>=0)
+ pressure[i] = localPressure[globalToLocal[i]];
+
+ // /////////////////////////////////////////////////////////////////////////////////////
+ // Compute the overall force and torque to see whether the preceding code is correct
+ // /////////////////////////////////////////////////////////////////////////////////////
+
+ Dune::FieldVector<double,3> outputForce(0), outputTorque(0);
+
+ computeTotalForceAndTorque(interface, pressure, centerOfTorque, outputForce, outputTorque);
+
+ outputForce -= resultantForce;
+ outputTorque -= resultantTorque;
+ assert( outputForce.infinity_norm() < 1e-6 );
+ assert( outputTorque.infinity_norm() < 1e-6 );
+ // std::cout << "Output force: " << outputForce << std::endl;
+ // std::cout << "Output torque: " << outputTorque << " " << resultantTorque[0]/outputTorque[0] << std::endl;
}
@@ -718,145 +718,145 @@ void computeAverageInterface(const BoundaryPatch<GridView>& interface,
const Dune::BlockVector<Dune::FieldVector<double,GridView::dimension> > deformation,
RigidBodyMotion<double,3>& average)
{
- using namespace Dune;
-
- typedef typename GridView::template Codim<0>::Entity EntityType;
- typedef typename GridView::IntersectionIterator NeighborIterator;
+ using namespace Dune;
- const GridView& gridView = interface.gridView();
- const typename GridView::IndexSet& indexSet = gridView.indexSet();
- const int dim = GridView::dimension;
+ typedef typename GridView::template Codim<0>::Entity EntityType;
+ typedef typename GridView::IntersectionIterator NeighborIterator;
- Dune::LagrangeLocalFiniteElementCache<double,double, dim, 1> finiteElementCache;
+ const GridView& gridView = interface.gridView();
+ const typename GridView::IndexSet& indexSet = gridView.indexSet();
+ const int dim = GridView::dimension;
- // ///////////////////////////////////////////
- // Initialize output configuration
- // ///////////////////////////////////////////
- average.r = 0;
+ Dune::LagrangeLocalFiniteElementCache<double,double, dim, 1> finiteElementCache;
- double interfaceArea = 0;
- FieldMatrix<double,dim,dim> deformationGradient(0);
+ // ///////////////////////////////////////////
+ // Initialize output configuration
+ // ///////////////////////////////////////////
+ average.r = 0;
- // ///////////////////////////////////////////
- // Loop and integrate over the interface
- // ///////////////////////////////////////////
+ double interfaceArea = 0;
+ FieldMatrix<double,dim,dim> deformationGradient(0);
- typename BoundaryPatch<GridView>::iterator it = interface.begin();
- typename BoundaryPatch<GridView>::iterator endIt = interface.end();
+ // ///////////////////////////////////////////
+ // Loop and integrate over the interface
+ // ///////////////////////////////////////////
- for (; it!=endIt; ++it) {
+ typename BoundaryPatch<GridView>::iterator it = interface.begin();
+ typename BoundaryPatch<GridView>::iterator endIt = interface.end();
- const typename NeighborIterator::Intersection::Geometry& segmentGeometry = it->geometry();
+ for (; it!=endIt; ++it) {
- // Get quadrature rule
- const QuadratureRule<double, dim-1>& quad = QuadratureRules<double, dim-1>::rule(segmentGeometry.type(), dim-1);
+ const typename NeighborIterator::Intersection::Geometry& segmentGeometry = it->geometry();
- // Get set of shape functions on this segment
- const typename Dune::LagrangeLocalFiniteElementCache<double,double, dim, 1>::FiniteElementType&
- localFiniteElement = finiteElementCache.get(it->inside()->type());
+ // Get quadrature rule
+ const QuadratureRule<double, dim-1>& quad = QuadratureRules<double, dim-1>::rule(segmentGeometry.type(), dim-1);
- /* Loop over all integration points */
- for (int ip=0; ip<quad.size(); ip++) {
+ // Get set of shape functions on this segment
+ const typename Dune::LagrangeLocalFiniteElementCache<double,double, dim, 1>::FiniteElementType&
+ localFiniteElement = finiteElementCache.get(it->inside()->type());
- // Local position of the quadrature point
- const FieldVector<double,dim> quadPos = it->geometryInInside().global(quad[ip].position());
+ /* Loop over all integration points */
+ for (int ip=0; ip<quad.size(); ip++) {
- const double integrationElement = segmentGeometry.integrationElement(quad[ip].position());
+ // Local position of the quadrature point
+ const FieldVector<double,dim> quadPos = it->geometryInInside().global(quad[ip].position());
- std::vector<Dune::FieldVector<double,1> > values;
- localFiniteElement.localBasis().evaluateFunction(quadPos,values);
+ const double integrationElement = segmentGeometry.integrationElement(quad[ip].position());
- // Evaluate base functions
- FieldVector<double,dim> posAtQuadPoint(0);
+ std::vector<Dune::FieldVector<double,1> > values;
+ localFiniteElement.localBasis().evaluateFunction(quadPos,values);
- for(int i=0; i<it->inside()->geometry().corners(); i++) {
+ // Evaluate base functions
+ FieldVector<double,dim> posAtQuadPoint(0);
- int idx = indexSet.subIndex(*it->inside(), i, dim);
+ for(int i=0; i<it->inside()->geometry().corners(); i++) {
- // Deformation at the quadrature point
- posAtQuadPoint.axpy(values[i], deformation[idx]);
- }
+ int idx = indexSet.subIndex(*it->inside(), i, dim);
- const FieldMatrix<double,dim,dim>& inv = it->inside()->geometry().jacobianInverseTransposed(quadPos);
+ // Deformation at the quadrature point
+ posAtQuadPoint.axpy(values[i], deformation[idx]);
+ }
- /**********************************************/
- /* compute gradients of the shape functions */
- /**********************************************/
- std::vector<FieldMatrix<double, 1, dim> > shapeGrads;
- localFiniteElement.localBasis().evaluateJacobian(quadPos,shapeGrads);
+ const FieldMatrix<double,dim,dim>& inv = it->inside()->geometry().jacobianInverseTransposed(quadPos);
- for (int dof=0; dof<it->inside()->geometry().corners(); dof++) {
+ /**********************************************/
+ /* compute gradients of the shape functions */
+ /**********************************************/
+ std::vector<FieldMatrix<double, 1, dim> > shapeGrads;
+ localFiniteElement.localBasis().evaluateJacobian(quadPos,shapeGrads);
- FieldVector<double,dim> tmp = shapeGrads[dof][0];
+ for (int dof=0; dof<it->inside()->geometry().corners(); dof++) {
- // multiply with jacobian inverse
- shapeGrads[dof] = 0;
- inv.umv(tmp, shapeGrads[dof][0]);
- }
+ FieldVector<double,dim> tmp = shapeGrads[dof][0];
- /****************************************************/
- // The deformation gradient of the deformation
- // in formulas: F(i,j) = $\partial \phi_i / \partial x_j$
- // or F(i,j) = Id + $\partial u_i / \partial x_j$
- /****************************************************/
- FieldMatrix<double, dim, dim> F;
- for (int i=0; i<dim; i++) {
+ // multiply with jacobian inverse
+ shapeGrads[dof] = 0;
+ inv.umv(tmp, shapeGrads[dof][0]);
+ }
- for (int j=0; j<dim; j++) {
+ /****************************************************/
+ // The deformation gradient of the deformation
+ // in formulas: F(i,j) = $\partial \phi_i / \partial x_j$
+ // or F(i,j) = Id + $\partial u_i / \partial x_j$
+ /****************************************************/
+ FieldMatrix<double, dim, dim> F;
+ for (int i=0; i<dim; i++) {
- F[i][j] = (i==j) ? 1 : 0;
+ for (int j=0; j<dim; j++) {
- for (int k=0; k<it->inside()->geometry().corners(); k++)
- F[i][j] += deformation[indexSet.subIndex(*it->inside(), k, dim)][i]*shapeGrads[k][0][j];
+ F[i][j] = (i==j) ? 1 : 0;
- }
+ for (int k=0; k<it->inside()->geometry().corners(); k++)
+ F[i][j] += deformation[indexSet.subIndex(*it->inside(), k, dim)][i]*shapeGrads[k][0][j];
- }
+ }
- // Sum up interface area
- interfaceArea += quad[ip].weight() * integrationElement;
+ }
- // Sum up average displacement
- average.r.axpy(quad[ip].weight() * integrationElement, posAtQuadPoint);
+ // Sum up interface area
+ interfaceArea += quad[ip].weight() * integrationElement;
- // Sum up average deformation gradient
- for (int i=0; i<dim; i++)
- for (int j=0; j<dim; j++)
- deformationGradient[i][j] += F[i][j] * quad[ip].weight() * integrationElement;
+ // Sum up average displacement
+ average.r.axpy(quad[ip].weight() * integrationElement, posAtQuadPoint);
- }
+ // Sum up average deformation gradient
+ for (int i=0; i<dim; i++)
+ for (int j=0; j<dim; j++)
+ deformationGradient[i][j] += F[i][j] * quad[ip].weight() * integrationElement;
}
+ }
+
- // average deformation of the interface is the integral over its
- // deformation divided by its area
- average.r /= interfaceArea;
+ // average deformation of the interface is the integral over its
+ // deformation divided by its area
+ average.r /= interfaceArea;
- // average deformation is the integral over the deformation gradient
- // divided by its area
- deformationGradient /= interfaceArea;
- //std::cout << "deformationGradient: " << std::endl << deformationGradient << std::endl;
+ // average deformation is the integral over the deformation gradient
+ // divided by its area
+ deformationGradient /= interfaceArea;
+ //std::cout << "deformationGradient: " << std::endl << deformationGradient << std::endl;
- // Get the rotational part of the deformation gradient by performing a
- // polar composition.
- FieldVector<double,dim> W;
- FieldMatrix<double,dim,dim> V, VT, U;
+ // Get the rotational part of the deformation gradient by performing a
+ // polar composition.
+ FieldVector<double,dim> W;
+ FieldMatrix<double,dim,dim> V, VT, U;
- // returns a decomposition U W VT, where U is returned in the first argument
- svdcmp<double,dim,dim>(deformationGradient, W, V);
+ // returns a decomposition U W VT, where U is returned in the first argument
+ svdcmp<double,dim,dim>(deformationGradient, W, V);
- for (int i=0; i<3; i++)
- for (int j=0; j<3; j++)
- VT[i][j] = V[j][i];
+ for (int i=0; i<3; i++)
+ for (int j=0; j<3; j++)
+ VT[i][j] = V[j][i];
- deformationGradient.rightmultiply(VT);
- //std::cout << deformationGradient << std::endl;
+ deformationGradient.rightmultiply(VT);
+ //std::cout << deformationGradient << std::endl;
- // deformationGradient now contains the orthogonal part of the polar decomposition
- assert( std::abs(1-deformationGradient.determinant()) < 1e-3);
+ // deformationGradient now contains the orthogonal part of the polar decomposition
+ assert( std::abs(1-deformationGradient.determinant()) < 1e-3);
- average.q.set(deformationGradient);
+ average.q.set(deformationGradient);
}
/** \brief Set a Dirichlet value that corresponds to a given rigid body motion
@@ -867,52 +867,52 @@ void setRotation(const BoundaryPatch<GridView>& dirichletBoundary,
const RigidBodyMotion<double,3>& referenceInterface,
const RigidBodyMotion<double,3>& lambda)
{
- const typename GridView::IndexSet& indexSet = dirichletBoundary.gridView().indexSet();
- const int dim = GridView::dimension;
- const int dimworld = GridView::dimensionworld;
+ const typename GridView::IndexSet& indexSet = dirichletBoundary.gridView().indexSet();
+ const int dim = GridView::dimension;
+ const int dimworld = GridView::dimensionworld;
- // Get the relative rotation, first as a quaternion...
- Rotation<double,3> relativeRotation;
- relativeRotation = Rotation<double,3>(referenceInterface.q.inverse());
- relativeRotation = lambda.q.mult(relativeRotation);
+ // Get the relative rotation, first as a quaternion...
+ Rotation<double,3> relativeRotation;
+ relativeRotation = Rotation<double,3>(referenceInterface.q.inverse());
+ relativeRotation = lambda.q.mult(relativeRotation);
- // ... then as a matrix
- Dune::FieldMatrix<double,3,3> rotation;
- relativeRotation.matrix(rotation);
+ // ... then as a matrix
+ Dune::FieldMatrix<double,3,3> rotation;
+ relativeRotation.matrix(rotation);
- // ///////////////////////////////////////////
- // Loop over all vertices
- // ///////////////////////////////////////////
+ // ///////////////////////////////////////////
+ // Loop over all vertices
+ // ///////////////////////////////////////////
- typename BoundaryPatch<GridView>::iterator it = dirichletBoundary.begin();
- typename BoundaryPatch<GridView>::iterator endIt = dirichletBoundary.end();
+ typename BoundaryPatch<GridView>::iterator it = dirichletBoundary.begin();
+ typename BoundaryPatch<GridView>::iterator endIt = dirichletBoundary.end();
- for (; it!=endIt; ++it) {
+ for (; it!=endIt; ++it) {
- int indexInInside = it->indexInInside();
- int nCorners = Dune::ReferenceElements<double,dim>::general(it->inside()->type()).size(indexInInside, 1, dim);
+ int indexInInside = it->indexInInside();
+ int nCorners = Dune::ReferenceElements<double,dim>::general(it->inside()->type()).size(indexInInside, 1, dim);
- for (int i=0; i<nCorners; i++) {
- int cornerIdx = Dune::ReferenceElements<double,dim>::general(it->inside()->type()).subEntity(it->indexInInside(), 1, i, dim);
- int globalIdx = indexSet.subIndex(*it->inside(), cornerIdx, dim);
+ for (int i=0; i<nCorners; i++) {
+ int cornerIdx = Dune::ReferenceElements<double,dim>::general(it->inside()->type()).subEntity(it->indexInInside(), 1, i, dim);
+ int globalIdx = indexSet.subIndex(*it->inside(), cornerIdx, dim);
- // Get vertex position
- const Dune::FieldVector<double,dimworld> pos = it->inside()->geometry().corner(cornerIdx);
+ // Get vertex position
+ const Dune::FieldVector<double,dimworld> pos = it->inside()->geometry().corner(cornerIdx);
- // Action of the rigid body motion
- Dune::FieldVector<double,dimworld> rpos;
- rotation.mv(pos-referenceInterface.r, rpos);
- rpos += lambda.r;
+ // Action of the rigid body motion
+ Dune::FieldVector<double,dimworld> rpos;
+ rotation.mv(pos-referenceInterface.r, rpos);
+ rpos += lambda.r;
- // We compute _displacements_, not positions
- rpos -= pos;
+ // We compute _displacements_, not positions
+ rpos -= pos;
- deformation[globalIdx] = rpos;
-
- }
+ deformation[globalIdx] = rpos;
}
+ }
+
}
#endif
diff --git a/dune/gfe/cosseratstrain.hh b/dune/gfe/cosseratstrain.hh
index f69141f1..84c99372 100644
--- a/dune/gfe/cosseratstrain.hh
+++ b/dune/gfe/cosseratstrain.hh
@@ -33,24 +33,24 @@ namespace Dune {
In the continuum case (domain dimension == world dimension) this is
\f$ \hat{F} = \nabla m \f$
In the case of a shell it is
- \f$ \hat{F} = (\nabla m | \overline{R}_3) \f$
- */
+ \f$ \hat{F} = (\nabla m | \overline{R}_3) \f$
+ */
FieldMatrix<T,dimworld,dimworld> F;
for (int i=0; i<dimworld; i++)
- for (int j=0; j<dim; j++)
- F[i][j] = deformationGradient[i][j];
+ for (int j=0; j<dim; j++)
+ F[i][j] = deformationGradient[i][j];
for (int i=0; i<dimworld; i++)
- for (int j=dim; j<dimworld; j++)
- F[i][j] = R[i][j];
+ for (int j=dim; j<dimworld; j++)
+ F[i][j] = R[i][j];
// U = R^T F
for (int i=0; i<dimworld; i++)
- for (int j=0; j<dimworld; j++) {
- data_[i][j] = 0;
- for (int k=0; k<dimworld; k++)
- data_[i][j] += R[k][i] * F[k][j];
- }
+ for (int j=0; j<dimworld; j++) {
+ data_[i][j] = 0;
+ for (int k=0; k<dimworld; k++)
+ data_[i][j] += R[k][i] * F[k][j];
+ }
}
@@ -65,24 +65,24 @@ namespace Dune {
In the continuum case (domain dimension == world dimension) this is
\f$ \hat{F} = \nabla m \f$
In the case of a shell it is
- \f$ \hat{F} = (\nabla m | \overline{R}_3) \f$
- */
+ \f$ \hat{F} = (\nabla m | \overline{R}_3) \f$
+ */
FieldMatrix<T,dimworld,dimworld> F;
for (int i=0; i<dimworld; i++)
- for (int j=0; j<dim; j++)
- F[i][j] = deformationGradient[i][j];
+ for (int j=0; j<dim; j++)
+ F[i][j] = deformationGradient[i][j];
for (int i=0; i<dimworld; i++)
- for (int j=dim; j<dimworld; j++)
- F[i][j] = R[i][j];
+ for (int j=dim; j<dimworld; j++)
+ F[i][j] = R[i][j];
// U = R^T F
for (int i=0; i<dimworld; i++)
- for (int j=0; j<dimworld; j++) {
- data_[i][j] = 0;
- for (int k=0; k<dimworld; k++)
- data_[i][j] += R[k][i] * F[k][j];
- }
+ for (int j=0; j<dimworld; j++) {
+ data_[i][j] = 0;
+ for (int k=0; k<dimworld; k++)
+ data_[i][j] += R[k][i] * F[k][j];
+ }
}
@@ -105,4 +105,4 @@ namespace Dune {
} // namespace Dune
-#endif // DUNE_GFE_COSSERATSTRAIN_HH
\ No newline at end of file
+#endif // DUNE_GFE_COSSERATSTRAIN_HH
diff --git a/dune/gfe/cosseratvtkwriter.hh b/dune/gfe/cosseratvtkwriter.hh
index 84799c74..feb41c41 100644
--- a/dune/gfe/cosseratvtkwriter.hh
+++ b/dune/gfe/cosseratvtkwriter.hh
@@ -19,545 +19,545 @@ template <class GridType>
class CosseratVTKWriter
{
- static const int dim = GridType::dimension;
-
- template <typename Basis1, typename Basis2>
- static void downsample(const Basis1& basis1, const std::vector<RigidBodyMotion<double,3> >& v1,
- const Basis2& basis2, std::vector<RigidBodyMotion<double,3> >& v2)
- {
- // Embed v1 into R^7
- std::vector<Dune::FieldVector<double,7> > v1Embedded(v1.size());
- for (size_t i=0; i<v1.size(); i++)
- v1Embedded[i] = v1[i].globalCoordinates();
-
- // Interpolate
- auto function = Dune::Functions::makeDiscreteGlobalBasisFunction<Dune::FieldVector<double,7> >(basis1, v1Embedded);
- std::vector<Dune::FieldVector<double,7> > v2Embedded;
- Dune::Functions::interpolate(basis2, v2Embedded, function);
-
- // Copy back from R^7 into RigidBodyMotions
- v2.resize(v2Embedded.size());
- for (size_t i=0; i<v2.size(); i++)
- v2[i] = RigidBodyMotion<double,3>(v2Embedded[i]);
- }
-
- template <typename Basis1, typename Basis2>
- static void downsample(const Basis1& basis1, const std::vector<RealTuple<double,3> >& v1,
- const Basis2& basis2, std::vector<RealTuple<double,3> >& v2)
- {
- // Copy from RealTuple to FieldVector
- std::vector<Dune::FieldVector<double,3> > v1Embedded(v1.size());
- for (size_t i=0; i<v1.size(); i++)
- v1Embedded[i] = v1[i].globalCoordinates();
-
- // Interpolate
- auto function = Dune::Functions::makeDiscreteGlobalBasisFunction<Dune::FieldVector<double,3> >(basis1, v1Embedded);
- std::vector<Dune::FieldVector<double,3> > v2Embedded;
- Dune::Functions::interpolate(basis2, v2Embedded, function);
-
- // Copy back from FieldVector to RealTuple
- v2.resize(v2Embedded.size());
- for (size_t i=0; i<v2.size(); i++)
- v2[i] = RealTuple<double,3>(v2Embedded[i]);
+ static const int dim = GridType::dimension;
+
+ template <typename Basis1, typename Basis2>
+ static void downsample(const Basis1& basis1, const std::vector<RigidBodyMotion<double,3> >& v1,
+ const Basis2& basis2, std::vector<RigidBodyMotion<double,3> >& v2)
+ {
+ // Embed v1 into R^7
+ std::vector<Dune::FieldVector<double,7> > v1Embedded(v1.size());
+ for (size_t i=0; i<v1.size(); i++)
+ v1Embedded[i] = v1[i].globalCoordinates();
+
+ // Interpolate
+ auto function = Dune::Functions::makeDiscreteGlobalBasisFunction<Dune::FieldVector<double,7> >(basis1, v1Embedded);
+ std::vector<Dune::FieldVector<double,7> > v2Embedded;
+ Dune::Functions::interpolate(basis2, v2Embedded, function);
+
+ // Copy back from R^7 into RigidBodyMotions
+ v2.resize(v2Embedded.size());
+ for (size_t i=0; i<v2.size(); i++)
+ v2[i] = RigidBodyMotion<double,3>(v2Embedded[i]);
+ }
+
+ template <typename Basis1, typename Basis2>
+ static void downsample(const Basis1& basis1, const std::vector<RealTuple<double,3> >& v1,
+ const Basis2& basis2, std::vector<RealTuple<double,3> >& v2)
+ {
+ // Copy from RealTuple to FieldVector
+ std::vector<Dune::FieldVector<double,3> > v1Embedded(v1.size());
+ for (size_t i=0; i<v1.size(); i++)
+ v1Embedded[i] = v1[i].globalCoordinates();
+
+ // Interpolate
+ auto function = Dune::Functions::makeDiscreteGlobalBasisFunction<Dune::FieldVector<double,3> >(basis1, v1Embedded);
+ std::vector<Dune::FieldVector<double,3> > v2Embedded;
+ Dune::Functions::interpolate(basis2, v2Embedded, function);
+
+ // Copy back from FieldVector to RealTuple
+ v2.resize(v2Embedded.size());
+ for (size_t i=0; i<v2.size(); i++)
+ v2[i] = RealTuple<double,3>(v2Embedded[i]);
+ }
+
+ /** \brief Extend filename to contain communicator rank and size
+ *
+ * Copied from dune-grid vtkwriter.hh
+ */
+ static std::string getParallelPieceName(const std::string& name,
+ const std::string& path,
+ int commRank, int commSize)
+ {
+ std::ostringstream s;
+ if(path.size() > 0) {
+ s << path;
+ if(path[path.size()-1] != '/')
+ s << '/';
}
-
- /** \brief Extend filename to contain communicator rank and size
- *
- * Copied from dune-grid vtkwriter.hh
- */
- static std::string getParallelPieceName(const std::string& name,
- const std::string& path,
- int commRank, int commSize)
- {
- std::ostringstream s;
- if(path.size() > 0) {
- s << path;
- if(path[path.size()-1] != '/')
- s << '/';
- }
- s << 's' << std::setw(4) << std::setfill('0') << commSize << '-';
- s << 'p' << std::setw(4) << std::setfill('0') << commRank << '-';
- s << name;
- if(GridType::dimension > 1)
- s << ".vtu";
- else
- s << ".vtp";
- return s.str();
- }
-
- /** \brief Extend filename to contain communicator rank and size
- *
- * Copied from dune-grid vtkwriter.hh
- */
- static std::string getParallelName(const std::string& name,
- const std::string& path,
- int commSize)
- {
- std::ostringstream s;
- if(path.size() > 0) {
- s << path;
- if(path[path.size()-1] != '/')
- s << '/';
- }
- s << 's' << std::setw(4) << std::setfill('0') << commSize << '-';
- s << name;
- if(GridType::dimension > 1)
- s << ".pvtu";
- else
- s << ".pvtp";
- return s.str();
+ s << 's' << std::setw(4) << std::setfill('0') << commSize << '-';
+ s << 'p' << std::setw(4) << std::setfill('0') << commRank << '-';
+ s << name;
+ if(GridType::dimension > 1)
+ s << ".vtu";
+ else
+ s << ".vtp";
+ return s.str();
+ }
+
+ /** \brief Extend filename to contain communicator rank and size
+ *
+ * Copied from dune-grid vtkwriter.hh
+ */
+ static std::string getParallelName(const std::string& name,
+ const std::string& path,
+ int commSize)
+ {
+ std::ostringstream s;
+ if(path.size() > 0) {
+ s << path;
+ if(path[path.size()-1] != '/')
+ s << '/';
}
+ s << 's' << std::setw(4) << std::setfill('0') << commSize << '-';
+ s << name;
+ if(GridType::dimension > 1)
+ s << ".pvtu";
+ else
+ s << ".pvtp";
+ return s.str();
+ }
public:
- /** \brief Write a configuration given with respect to a scalar function space basis
- */
- template <typename Basis>
- static void write(const Basis& basis,
- const Dune::TupleVector<std::vector<RealTuple<double,3> >,
- std::vector<Rotation<double,3> > >& configuration,
- const std::string& filename)
- {
- using namespace Dune::TypeTree::Indices;
- std::vector<RigidBodyMotion<double,3>> xRBM(basis.size());
- for (std::size_t i = 0; i < basis.size(); i++) {
- for (int j = 0; j < 3; j ++) // Displacement part
- xRBM[i].r[j] = configuration[_0][i][j];
- xRBM[i].q = configuration[_1][i]; // Rotation part
- }
- write(basis,xRBM,filename);
+ /** \brief Write a configuration given with respect to a scalar function space basis
+ */
+ template <typename Basis>
+ static void write(const Basis& basis,
+ const Dune::TupleVector<std::vector<RealTuple<double,3> >,
+ std::vector<Rotation<double,3> > >& configuration,
+ const std::string& filename)
+ {
+ using namespace Dune::TypeTree::Indices;
+ std::vector<RigidBodyMotion<double,3> > xRBM(basis.size());
+ for (std::size_t i = 0; i < basis.size(); i++) {
+ for (int j = 0; j < 3; j ++) // Displacement part
+ xRBM[i].r[j] = configuration[_0][i][j];
+ xRBM[i].q = configuration[_1][i]; // Rotation part
}
- /** \brief Write a configuration given with respect to a scalar function space basis
- */
- template <typename Basis, typename VectorType>
- static void write(const Basis& basis,
- const VectorType& configuration,
- const std::string& filename)
- {
- using namespace Dune::TypeTree::Indices;
- std::vector<RigidBodyMotion<double,3>> xRBM(basis.size());
- for (std::size_t i = 0; i < basis.size(); i++) {
- for (int j = 0; j < 3; j ++) // Displacement part
- xRBM[i].r[j] = configuration[i][j];
- }
- write(basis,xRBM,filename);
+ write(basis,xRBM,filename);
+ }
+ /** \brief Write a configuration given with respect to a scalar function space basis
+ */
+ template <typename Basis, typename VectorType>
+ static void write(const Basis& basis,
+ const VectorType& configuration,
+ const std::string& filename)
+ {
+ using namespace Dune::TypeTree::Indices;
+ std::vector<RigidBodyMotion<double,3> > xRBM(basis.size());
+ for (std::size_t i = 0; i < basis.size(); i++) {
+ for (int j = 0; j < 3; j ++) // Displacement part
+ xRBM[i].r[j] = configuration[i][j];
}
-
- /** \brief Write a configuration given with respect to a scalar function space basis
- */
- template <typename Basis>
- static void write(const Basis& basis,
- const std::vector<RigidBodyMotion<double,3> >& configuration,
- const std::string& filename)
+ write(basis,xRBM,filename);
+ }
+
+ /** \brief Write a configuration given with respect to a scalar function space basis
+ */
+ template <typename Basis>
+ static void write(const Basis& basis,
+ const std::vector<RigidBodyMotion<double,3> >& configuration,
+ const std::string& filename)
+ {
+ assert(basis.size() == configuration.size());
+ auto gridView = basis.gridView();
+
+ // Determine order of the basis
+ // We check for the order of the first element, and assume it is the same for all others
+ auto localView = basis.localView();
+ localView.bind(*gridView.template begin<0>());
+ const int order = localView.tree().finiteElement().localBasis().order();
+ // order of the approximation of the VTK file -- can only be two or one
+ const auto vtkOrder = std::min(2,order);
+
+ // Downsample 3rd-order functions onto a P2-space. That's all VTK can visualize today.
+ if (order>=3)
{
- assert(basis.size() == configuration.size());
- auto gridView = basis.gridView();
-
- // Determine order of the basis
- // We check for the order of the first element, and assume it is the same for all others
- auto localView = basis.localView();
- localView.bind(*gridView.template begin<0>());
- const int order = localView.tree().finiteElement().localBasis().order();
- // order of the approximation of the VTK file -- can only be two or one
- const auto vtkOrder = std::min(2,order);
-
- // Downsample 3rd-order functions onto a P2-space. That's all VTK can visualize today.
- if (order>=3)
- {
- using namespace Dune::Functions::BasisFactory;
- auto p2Basis = makeBasis(gridView, lagrange<2>());
-
- auto blockedP2Basis = makeBasis(
- gridView,
- power<3>(
- lagrange<2>(),
- blockedInterleaved()
+ using namespace Dune::Functions::BasisFactory;
+ auto p2Basis = makeBasis(gridView, lagrange<2>());
+
+ auto blockedP2Basis = makeBasis(
+ gridView,
+ power<3>(
+ lagrange<2>(),
+ blockedInterleaved()
));
- std::vector<RigidBodyMotion<double,3> > downsampledConfig;
+ std::vector<RigidBodyMotion<double,3> > downsampledConfig;
- downsample(basis, configuration, blockedP2Basis, downsampledConfig);
+ downsample(basis, configuration, blockedP2Basis, downsampledConfig);
- write(p2Basis, downsampledConfig, filename);
- return;
- }
+ write(p2Basis, downsampledConfig, filename);
+ return;
+ }
- Dune::GFE::VTKFile vtkFile;
+ Dune::GFE::VTKFile vtkFile;
- // Count the number of elements of the different types
- std::map<Dune::GeometryType,std::size_t> numElements;
- for (const auto t : gridView.indexSet().types(0))
- numElements[t] = 0;
+ // Count the number of elements of the different types
+ std::map<Dune::GeometryType,std::size_t> numElements;
+ for (const auto t : gridView.indexSet().types(0))
+ numElements[t] = 0;
- for (auto&& t : elements(gridView, Dune::Partitions::interior))
- numElements[t.type()]++;
+ for (auto&& t : elements(gridView, Dune::Partitions::interior))
+ numElements[t.type()]++;
- std::size_t totalNumElements = 0;
- for (const auto nE : numElements)
- totalNumElements += nE.second;
+ std::size_t totalNumElements = 0;
+ for (const auto nE : numElements)
+ totalNumElements += nE.second;
- // Enter vertex coordinates
- std::vector<Dune::FieldVector<double, 3> > points(configuration.size());
- for (size_t i=0; i<configuration.size(); i++)
- points[i] = configuration[i].r;
+ // Enter vertex coordinates
+ std::vector<Dune::FieldVector<double, 3> > points(configuration.size());
+ for (size_t i=0; i<configuration.size(); i++)
+ points[i] = configuration[i].r;
- vtkFile.points_ = points;
+ vtkFile.points_ = points;
- // Enter elements
- std::size_t connectivitySize = 0;
- for (const auto nE : numElements)
+ // Enter elements
+ std::size_t connectivitySize = 0;
+ for (const auto nE : numElements)
+ {
+ if (nE.first.isQuadrilateral())
+ connectivitySize += ((vtkOrder==2) ? 8 : 4) * nE.second;
+ else if (nE.first.isTriangle())
+ connectivitySize += ((vtkOrder==2) ? 6 : 3) * nE.second;
+ else if (nE.first.isHexahedron())
+ connectivitySize += ((vtkOrder==2) ? 20 : 8) * nE.second;
+ else if (nE.first.isLine())
+ connectivitySize += ((vtkOrder==2) ? 3 : 2) * nE.second;
+ else
+ DUNE_THROW(Dune::IOError, "Unsupported element type '" << nE.first << "' found!");
+ }
+ std::vector<unsigned int> connectivity(connectivitySize);
+
+ size_t i=0;
+ for (const auto& element : elements(gridView, Dune::Partitions::interior))
+ {
+ localView.bind(element);
+
+ if (element.type().isQuadrilateral())
+ {
+ if (vtkOrder==2)
{
- if (nE.first.isQuadrilateral())
- connectivitySize += ((vtkOrder==2) ? 8 : 4) * nE.second;
- else if (nE.first.isTriangle())
- connectivitySize += ((vtkOrder==2) ? 6 : 3) * nE.second;
- else if (nE.first.isHexahedron())
- connectivitySize += ((vtkOrder==2) ? 20 : 8) * nE.second;
- else if (nE.first.isLine())
- connectivitySize += ((vtkOrder==2) ? 3 : 2) * nE.second;
- else
- DUNE_THROW(Dune::IOError, "Unsupported element type '" << nE.first << "' found!");
+ connectivity[i++] = localView.index(0);
+ connectivity[i++] = localView.index(2);
+ connectivity[i++] = localView.index(8);
+ connectivity[i++] = localView.index(6);
+
+ connectivity[i++] = localView.index(1);
+ connectivity[i++] = localView.index(5);
+ connectivity[i++] = localView.index(7);
+ connectivity[i++] = localView.index(3);
}
- std::vector<unsigned int> connectivity(connectivitySize);
-
- size_t i=0;
- for (const auto& element : elements(gridView, Dune::Partitions::interior))
+ else // first order
{
- localView.bind(element);
-
- if (element.type().isQuadrilateral())
- {
- if (vtkOrder==2)
- {
- connectivity[i++] = localView.index(0);
- connectivity[i++] = localView.index(2);
- connectivity[i++] = localView.index(8);
- connectivity[i++] = localView.index(6);
-
- connectivity[i++] = localView.index(1);
- connectivity[i++] = localView.index(5);
- connectivity[i++] = localView.index(7);
- connectivity[i++] = localView.index(3);
- }
- else // first order
- {
- connectivity[i++] = localView.index(0);
- connectivity[i++] = localView.index(1);
- connectivity[i++] = localView.index(3);
- connectivity[i++] = localView.index(2);
- }
- }
- if (element.type().isTriangle())
- {
- if (vtkOrder==2)
- {
- connectivity[i++] = localView.index(0);
- connectivity[i++] = localView.index(2);
- connectivity[i++] = localView.index(5);
- connectivity[i++] = localView.index(1);
- connectivity[i++] = localView.index(4);
- connectivity[i++] = localView.index(3);
- }
- else // first order
- {
- connectivity[i++] = localView.index(0);
- connectivity[i++] = localView.index(1);
- connectivity[i++] = localView.index(2);
- }
- }
- if (element.type().isHexahedron())
- {
- if (vtkOrder==2)
- {
- // Corner dofs
- connectivity[i++] = localView.index(0);
- connectivity[i++] = localView.index(2);
- connectivity[i++] = localView.index(8);
- connectivity[i++] = localView.index(6);
-
- connectivity[i++] = localView.index(18);
- connectivity[i++] = localView.index(20);
- connectivity[i++] = localView.index(26);
- connectivity[i++] = localView.index(24);
-
- // Edge dofs
- connectivity[i++] = localView.index(1);
- connectivity[i++] = localView.index(5);
- connectivity[i++] = localView.index(7);
- connectivity[i++] = localView.index(3);
-
- connectivity[i++] = localView.index(19);
- connectivity[i++] = localView.index(23);
- connectivity[i++] = localView.index(25);
- connectivity[i++] = localView.index(21);
-
- connectivity[i++] = localView.index(9);
- connectivity[i++] = localView.index(11);
- connectivity[i++] = localView.index(17);
- connectivity[i++] = localView.index(15);
- }
- else // first order
- {
- connectivity[i++] = localView.index(0);
- connectivity[i++] = localView.index(1);
- connectivity[i++] = localView.index(3);
- connectivity[i++] = localView.index(2);
- connectivity[i++] = localView.index(4);
- connectivity[i++] = localView.index(5);
- connectivity[i++] = localView.index(7);
- connectivity[i++] = localView.index(6);
- }
- }
-
- if (element.type().isLine())
- {
- if (vtkOrder==2)
- {
- connectivity[i++] = localView.index(0);
- connectivity[i++] = localView.index(2);
- connectivity[i++] = localView.index(1);
- }
- else // first order
- {
- connectivity[i++] = localView.index(0);
- connectivity[i++] = localView.index(1);
- }
- }
+ connectivity[i++] = localView.index(0);
+ connectivity[i++] = localView.index(1);
+ connectivity[i++] = localView.index(3);
+ connectivity[i++] = localView.index(2);
}
+ }
+ if (element.type().isTriangle())
+ {
+ if (vtkOrder==2)
+ {
+ connectivity[i++] = localView.index(0);
+ connectivity[i++] = localView.index(2);
+ connectivity[i++] = localView.index(5);
+ connectivity[i++] = localView.index(1);
+ connectivity[i++] = localView.index(4);
+ connectivity[i++] = localView.index(3);
+ }
+ else // first order
+ {
+ connectivity[i++] = localView.index(0);
+ connectivity[i++] = localView.index(1);
+ connectivity[i++] = localView.index(2);
+ }
+ }
+ if (element.type().isHexahedron())
+ {
+ if (vtkOrder==2)
+ {
+ // Corner dofs
+ connectivity[i++] = localView.index(0);
+ connectivity[i++] = localView.index(2);
+ connectivity[i++] = localView.index(8);
+ connectivity[i++] = localView.index(6);
+
+ connectivity[i++] = localView.index(18);
+ connectivity[i++] = localView.index(20);
+ connectivity[i++] = localView.index(26);
+ connectivity[i++] = localView.index(24);
+
+ // Edge dofs
+ connectivity[i++] = localView.index(1);
+ connectivity[i++] = localView.index(5);
+ connectivity[i++] = localView.index(7);
+ connectivity[i++] = localView.index(3);
+
+ connectivity[i++] = localView.index(19);
+ connectivity[i++] = localView.index(23);
+ connectivity[i++] = localView.index(25);
+ connectivity[i++] = localView.index(21);
+
+ connectivity[i++] = localView.index(9);
+ connectivity[i++] = localView.index(11);
+ connectivity[i++] = localView.index(17);
+ connectivity[i++] = localView.index(15);
+ }
+ else // first order
+ {
+ connectivity[i++] = localView.index(0);
+ connectivity[i++] = localView.index(1);
+ connectivity[i++] = localView.index(3);
+ connectivity[i++] = localView.index(2);
+ connectivity[i++] = localView.index(4);
+ connectivity[i++] = localView.index(5);
+ connectivity[i++] = localView.index(7);
+ connectivity[i++] = localView.index(6);
+ }
+ }
- vtkFile.cellConnectivity_ = connectivity;
-
- std::vector<int> offsets(totalNumElements);
- i = 0;
- int offsetCounter = 0;
- for (const auto& element : elements(gridView, Dune::Partitions::interior))
+ if (element.type().isLine())
+ {
+ if (vtkOrder==2)
{
- if (element.type().isQuadrilateral())
- offsetCounter += (vtkOrder==2) ? 8 : 4;
+ connectivity[i++] = localView.index(0);
+ connectivity[i++] = localView.index(2);
+ connectivity[i++] = localView.index(1);
+ }
+ else // first order
+ {
+ connectivity[i++] = localView.index(0);
+ connectivity[i++] = localView.index(1);
+ }
+ }
+ }
- if (element.type().isTriangle())
- offsetCounter += (vtkOrder==2) ? 6 : 3;
+ vtkFile.cellConnectivity_ = connectivity;
- if (element.type().isHexahedron())
- offsetCounter += (vtkOrder==2) ? 20 : 8;
+ std::vector<int> offsets(totalNumElements);
+ i = 0;
+ int offsetCounter = 0;
+ for (const auto& element : elements(gridView, Dune::Partitions::interior))
+ {
+ if (element.type().isQuadrilateral())
+ offsetCounter += (vtkOrder==2) ? 8 : 4;
- offsets[i++] += offsetCounter;
- }
+ if (element.type().isTriangle())
+ offsetCounter += (vtkOrder==2) ? 6 : 3;
- vtkFile.cellOffsets_ = offsets;
+ if (element.type().isHexahedron())
+ offsetCounter += (vtkOrder==2) ? 20 : 8;
- std::vector<int> cellTypes(totalNumElements);
- i = 0;
- for (const auto& element : elements(gridView, Dune::Partitions::interior))
- {
- if (element.type().isQuadrilateral())
- cellTypes[i++] = (vtkOrder==2) ? 23 : 9;
+ offsets[i++] += offsetCounter;
+ }
- if (element.type().isTriangle())
- cellTypes[i++] = (vtkOrder==2) ? 22 : 5;
+ vtkFile.cellOffsets_ = offsets;
- if (element.type().isHexahedron())
- cellTypes[i++] = (vtkOrder==2) ? 25 : 12;
- }
- vtkFile.cellTypes_ = cellTypes;
+ std::vector<int> cellTypes(totalNumElements);
+ i = 0;
+ for (const auto& element : elements(gridView, Dune::Partitions::interior))
+ {
+ if (element.type().isQuadrilateral())
+ cellTypes[i++] = (vtkOrder==2) ? 23 : 9;
- // Z coordinate for better visualization of wrinkles
- std::vector<double> zCoord(points.size());
- for (size_t i=0; i<configuration.size(); i++)
- zCoord[i] = configuration[i].r[2];
+ if (element.type().isTriangle())
+ cellTypes[i++] = (vtkOrder==2) ? 22 : 5;
- vtkFile.zCoord_ = zCoord;
+ if (element.type().isHexahedron())
+ cellTypes[i++] = (vtkOrder==2) ? 25 : 12;
+ }
+ vtkFile.cellTypes_ = cellTypes;
- // The three director fields
- for (size_t i=0; i<3; i++)
- {
- vtkFile.directors_[i].resize(configuration.size());
- for (size_t j=0; j<configuration.size(); j++)
- vtkFile.directors_[i][j] = configuration[j].q.director(i);
- }
+ // Z coordinate for better visualization of wrinkles
+ std::vector<double> zCoord(points.size());
+ for (size_t i=0; i<configuration.size(); i++)
+ zCoord[i] = configuration[i].r[2];
- // Actually write the VTK file to disk
- vtkFile.write(filename);
- }
+ vtkFile.zCoord_ = zCoord;
- /** \brief Write a configuration given with respect to a scalar function space basis
- */
- template <typename DisplacementBasis, typename OrientationBasis>
- static void writeMixed(const DisplacementBasis& displacementBasis,
- const std::vector<RealTuple<double,3> >& deformationConfiguration,
- const OrientationBasis& orientationBasis,
- const std::vector<Rotation<double,3> >& orientationConfiguration,
- const std::string& filename)
+ // The three director fields
+ for (size_t i=0; i<3; i++)
{
- assert(displacementBasis.size() == deformationConfiguration.size());
- assert(orientationBasis.size() == orientationConfiguration.size());
- auto gridView = displacementBasis.gridView();
-
- // Determine order of the displacement basis
- auto localView = displacementBasis.localView();
- localView.bind(*gridView.template begin<0>());
- int order = localView.tree().finiteElement().localBasis().order();
+ vtkFile.directors_[i].resize(configuration.size());
+ for (size_t j=0; j<configuration.size(); j++)
+ vtkFile.directors_[i][j] = configuration[j].q.director(i);
+ }
- // We only do P2 spaces at the moment
- if (order != 2 and order != 3)
- {
- std::cout << "Warning: CosseratVTKWriter only supports P2 spaces -- skipping" << std::endl;
- return;
- }
+ // Actually write the VTK file to disk
+ vtkFile.write(filename);
+ }
+
+ /** \brief Write a configuration given with respect to a scalar function space basis
+ */
+ template <typename DisplacementBasis, typename OrientationBasis>
+ static void writeMixed(const DisplacementBasis& displacementBasis,
+ const std::vector<RealTuple<double,3> >& deformationConfiguration,
+ const OrientationBasis& orientationBasis,
+ const std::vector<Rotation<double,3> >& orientationConfiguration,
+ const std::string& filename)
+ {
+ assert(displacementBasis.size() == deformationConfiguration.size());
+ assert(orientationBasis.size() == orientationConfiguration.size());
+ auto gridView = displacementBasis.gridView();
+
+ // Determine order of the displacement basis
+ auto localView = displacementBasis.localView();
+ localView.bind(*gridView.template begin<0>());
+ int order = localView.tree().finiteElement().localBasis().order();
+
+ // We only do P2 spaces at the moment
+ if (order != 2 and order != 3)
+ {
+ std::cout << "Warning: CosseratVTKWriter only supports P2 spaces -- skipping" << std::endl;
+ return;
+ }
- std::vector<RealTuple<double,3> > displacementConfiguration = deformationConfiguration;
+ std::vector<RealTuple<double,3> > displacementConfiguration = deformationConfiguration;
- if (order == 3)
- {
- using namespace Dune::Functions::BasisFactory;
+ if (order == 3)
+ {
+ using namespace Dune::Functions::BasisFactory;
- auto p2DeformationBasis = makeBasis(
- gridView,
- power<3>(
- lagrange<2>(),
- blockedInterleaved()
+ auto p2DeformationBasis = makeBasis(
+ gridView,
+ power<3>(
+ lagrange<2>(),
+ blockedInterleaved()
));
- // resample to 2nd order -- vtk can't do anything higher
- std::vector<RealTuple<double,3> > p2DeformationConfiguration;
+ // resample to 2nd order -- vtk can't do anything higher
+ std::vector<RealTuple<double,3> > p2DeformationConfiguration;
- downsample(displacementBasis, displacementConfiguration,
- p2DeformationBasis, p2DeformationConfiguration);
+ downsample(displacementBasis, displacementConfiguration,
+ p2DeformationBasis, p2DeformationConfiguration);
- displacementConfiguration = p2DeformationConfiguration;
- }
+ displacementConfiguration = p2DeformationConfiguration;
+ }
- std::string fullfilename = filename + ".vtu";
+ std::string fullfilename = filename + ".vtu";
- // Prepend rank and communicator size to the filename, if there are more than one process
- if (gridView.comm().size() > 1)
- fullfilename = getParallelPieceName(filename, "", gridView.comm().rank(), gridView.comm().size());
+ // Prepend rank and communicator size to the filename, if there are more than one process
+ if (gridView.comm().size() > 1)
+ fullfilename = getParallelPieceName(filename, "", gridView.comm().rank(), gridView.comm().size());
- // Write the pvtu file that ties together the different parts
- if (gridView.comm().size() > 1 && gridView.comm().rank()==0)
- {
- std::ofstream pvtuOutFile(getParallelName(filename, "", gridView.comm().size()));
- Dune::VTK::PVTUWriter writer(pvtuOutFile, Dune::VTK::unstructuredGrid);
+ // Write the pvtu file that ties together the different parts
+ if (gridView.comm().size() > 1 && gridView.comm().rank()==0)
+ {
+ std::ofstream pvtuOutFile(getParallelName(filename, "", gridView.comm().size()));
+ Dune::VTK::PVTUWriter writer(pvtuOutFile, Dune::VTK::unstructuredGrid);
- writer.beginMain();
+ writer.beginMain();
- //writer.beginPointData();
- //writer.addArray<float>("director0", 3);
- //writer.addArray<float>("director1", 3);
- //writer.addArray<float>("director2", 3);
- //writer.addArray<float>("zCoord", 1);
- //writer.endPointData();
+ //writer.beginPointData();
+ //writer.addArray<float>("director0", 3);
+ //writer.addArray<float>("director1", 3);
+ //writer.addArray<float>("director2", 3);
+ //writer.addArray<float>("zCoord", 1);
+ //writer.endPointData();
- // dump point coordinates
- writer.beginPoints();
- writer.addArray("Coordinates", 3, Dune::VTK::Precision::float32);
- writer.endPoints();
+ // dump point coordinates
+ writer.beginPoints();
+ writer.addArray("Coordinates", 3, Dune::VTK::Precision::float32);
+ writer.endPoints();
- for (int i=0; i<gridView.comm().size(); i++)
- writer.addPiece(getParallelPieceName(filename, "", i, gridView.comm().size()));
+ for (int i=0; i<gridView.comm().size(); i++)
+ writer.addPiece(getParallelPieceName(filename, "", i, gridView.comm().size()));
- // finish main section
- writer.endMain();
- }
+ // finish main section
+ writer.endMain();
+ }
- /////////////////////////////////////////////////////////////////////////////////
- // Write the actual vtu file
- /////////////////////////////////////////////////////////////////////////////////
+ /////////////////////////////////////////////////////////////////////////////////
+ // Write the actual vtu file
+ /////////////////////////////////////////////////////////////////////////////////
- // Stupid: I can't directly get the number of Interior_Partition elements
- size_t numElements = std::distance(gridView.template begin<0, Dune::Interior_Partition>(),
- gridView.template end<0, Dune::Interior_Partition>());
+ // Stupid: I can't directly get the number of Interior_Partition elements
+ size_t numElements = std::distance(gridView.template begin<0, Dune::Interior_Partition>(),
+ gridView.template end<0, Dune::Interior_Partition>());
- std::ofstream outFile(fullfilename);
+ std::ofstream outFile(fullfilename);
- // Write header
- outFile << "<?xml version=\"1.0\"?>" << std::endl;
- outFile << "<VTKFile type=\"UnstructuredGrid\" version=\"0.1\" byte_order=\"LittleEndian\">" << std::endl;
- outFile << " <UnstructuredGrid>" << std::endl;
- outFile << " <Piece NumberOfCells=\"" << numElements << "\" NumberOfPoints=\"" << displacementConfiguration.size() << "\">" << std::endl;
+ // Write header
+ outFile << "<?xml version=\"1.0\"?>" << std::endl;
+ outFile << "<VTKFile type=\"UnstructuredGrid\" version=\"0.1\" byte_order=\"LittleEndian\">" << std::endl;
+ outFile << " <UnstructuredGrid>" << std::endl;
+ outFile << " <Piece NumberOfCells=\"" << numElements << "\" NumberOfPoints=\"" << displacementConfiguration.size() << "\">" << std::endl;
- // Write vertex coordinates
- outFile << " <Points>" << std::endl;
- outFile << " <DataArray type=\"Float32\" Name=\"Coordinates\" NumberOfComponents=\"3\" format=\"ascii\">" << std::endl;
- for (size_t i=0; i<displacementConfiguration.size(); i++)
- outFile << " " << displacementConfiguration[i] << std::endl;
- outFile << " </DataArray>" << std::endl;
- outFile << " </Points>" << std::endl;
+ // Write vertex coordinates
+ outFile << " <Points>" << std::endl;
+ outFile << " <DataArray type=\"Float32\" Name=\"Coordinates\" NumberOfComponents=\"3\" format=\"ascii\">" << std::endl;
+ for (size_t i=0; i<displacementConfiguration.size(); i++)
+ outFile << " " << displacementConfiguration[i] << std::endl;
+ outFile << " </DataArray>" << std::endl;
+ outFile << " </Points>" << std::endl;
- // Write elements
- outFile << " <Cells>" << std::endl;
+ // Write elements
+ outFile << " <Cells>" << std::endl;
- outFile << " <DataArray type=\"Int32\" Name=\"connectivity\" NumberOfComponents=\"1\" format=\"ascii\">" << std::endl;
+ outFile << " <DataArray type=\"Int32\" Name=\"connectivity\" NumberOfComponents=\"1\" format=\"ascii\">" << std::endl;
- for (const auto& element : elements(gridView, Dune::Partitions::interior))
- {
- localView.bind(element);
-
- outFile << " ";
- if (element.type().isQuadrilateral())
- {
- outFile << localView.index(0) << " ";
- outFile << localView.index(2) << " ";
- outFile << localView.index(8) << " ";
- outFile << localView.index(6) << " ";
-
- outFile << localView.index(1) << " ";
- outFile << localView.index(5) << " ";
- outFile << localView.index(7) << " ";
- outFile << localView.index(3) << " ";
-
- outFile << std::endl;
- }
- }
- outFile << " </DataArray>" << std::endl;
+ for (const auto& element : elements(gridView, Dune::Partitions::interior))
+ {
+ localView.bind(element);
+
+ outFile << " ";
+ if (element.type().isQuadrilateral())
+ {
+ outFile << localView.index(0) << " ";
+ outFile << localView.index(2) << " ";
+ outFile << localView.index(8) << " ";
+ outFile << localView.index(6) << " ";
+
+ outFile << localView.index(1) << " ";
+ outFile << localView.index(5) << " ";
+ outFile << localView.index(7) << " ";
+ outFile << localView.index(3) << " ";
+
+ outFile << std::endl;
+ }
+ }
+ outFile << " </DataArray>" << std::endl;
- outFile << " <DataArray type=\"Int32\" Name=\"offsets\" NumberOfComponents=\"1\" format=\"ascii\">" << std::endl;
- size_t offsetCounter = 0;
- for (const auto& element : elements(gridView))
- {
- outFile << " ";
- if (element.type().isQuadrilateral())
- offsetCounter += 8;
- outFile << offsetCounter << std::endl;
- }
- outFile << " </DataArray>" << std::endl;
+ outFile << " <DataArray type=\"Int32\" Name=\"offsets\" NumberOfComponents=\"1\" format=\"ascii\">" << std::endl;
+ size_t offsetCounter = 0;
+ for (const auto& element : elements(gridView))
+ {
+ outFile << " ";
+ if (element.type().isQuadrilateral())
+ offsetCounter += 8;
+ outFile << offsetCounter << std::endl;
+ }
+ outFile << " </DataArray>" << std::endl;
- outFile << " <DataArray type=\"UInt8\" Name=\"types\" NumberOfComponents=\"1\" format=\"ascii\">" << std::endl;
- for (const auto& element : elements(gridView))
- {
- outFile << " ";
- if (element.type().isQuadrilateral())
- outFile << "23" << std::endl;
- }
- outFile << " </DataArray>" << std::endl;
+ outFile << " <DataArray type=\"UInt8\" Name=\"types\" NumberOfComponents=\"1\" format=\"ascii\">" << std::endl;
+ for (const auto& element : elements(gridView))
+ {
+ outFile << " ";
+ if (element.type().isQuadrilateral())
+ outFile << "23" << std::endl;
+ }
+ outFile << " </DataArray>" << std::endl;
- outFile << " </Cells>" << std::endl;
+ outFile << " </Cells>" << std::endl;
#if 0
- // Point data
- outFile << " <PointData Scalars=\"zCoord\" Vectors=\"director0\">" << std::endl;
+ // Point data
+ outFile << " <PointData Scalars=\"zCoord\" Vectors=\"director0\">" << std::endl;
- // Z coordinate for better visualization of wrinkles
- outFile << " <DataArray type=\"Float32\" Name=\"zCoord\" NumberOfComponents=\"1\" format=\"ascii\">" << std::endl;
- for (size_t i=0; i<configuration.size(); i++)
- outFile << " " << configuration[i].r[2] << std::endl;
- outFile << " </DataArray>" << std::endl;
+ // Z coordinate for better visualization of wrinkles
+ outFile << " <DataArray type=\"Float32\" Name=\"zCoord\" NumberOfComponents=\"1\" format=\"ascii\">" << std::endl;
+ for (size_t i=0; i<configuration.size(); i++)
+ outFile << " " << configuration[i].r[2] << std::endl;
+ outFile << " </DataArray>" << std::endl;
- // The three director fields
- for (size_t i=0; i<3; i++)
- {
- outFile << " <DataArray type=\"Float32\" Name=\"director" << i <<"\" NumberOfComponents=\"3\" format=\"ascii\">" << std::endl;
- for (size_t j=0; j<configuration.size(); j++)
- outFile << " " << configuration[j].q.director(i) << std::endl;
- outFile << " </DataArray>" << std::endl;
- }
+ // The three director fields
+ for (size_t i=0; i<3; i++)
+ {
+ outFile << " <DataArray type=\"Float32\" Name=\"director" << i <<"\" NumberOfComponents=\"3\" format=\"ascii\">" << std::endl;
+ for (size_t j=0; j<configuration.size(); j++)
+ outFile << " " << configuration[j].q.director(i) << std::endl;
+ outFile << " </DataArray>" << std::endl;
+ }
- outFile << " </PointData>" << std::endl;
+ outFile << " </PointData>" << std::endl;
#endif
- // Write footer
- outFile << " </Piece>" << std::endl;
- outFile << " </UnstructuredGrid>" << std::endl;
- outFile << "</VTKFile>" << std::endl;
+ // Write footer
+ outFile << " </Piece>" << std::endl;
+ outFile << " </UnstructuredGrid>" << std::endl;
+ outFile << "</VTKFile>" << std::endl;
- }
+ }
};
diff --git a/dune/gfe/coupling/rodcontinuumcomplex.hh b/dune/gfe/coupling/rodcontinuumcomplex.hh
index 2815b2c0..2cf3988a 100644
--- a/dune/gfe/coupling/rodcontinuumcomplex.hh
+++ b/dune/gfe/coupling/rodcontinuumcomplex.hh
@@ -18,113 +18,113 @@
template <class RodGrid, class ContinuumGrid>
class RodContinuumComplex
{
- dune_static_assert(RodGrid::dimension==1, "The RodGrid has to be one-dimensional!");
-
- static const int dim = ContinuumGrid::dimension;
-
- typedef std::vector<RigidBodyMotion<double,3> > RodConfiguration;
-
- typedef Dune::BlockVector<Dune::FieldVector<double,3> > ContinuumConfiguration;
-
- /** \brief Holds all data for a rod/continuum coupling */
- struct Coupling
- {
- BoundaryPatch<typename RodGrid::LeafGridView> rodInterfaceBoundary_;
-
- BoundaryPatch<typename ContinuumGrid::LeafGridView> continuumInterfaceBoundary_;
-
- /** \brief The orientation of the interface in the reference configuration */
- RigidBodyMotion<double,dim> referenceInterface_;
- };
-
- /** \brief Holds all data for a rod subproblem */
- struct RodData
- {
- Dune::shared_ptr<RodGrid> grid_;
-
- BoundaryPatch<typename RodGrid::LeafGridView> dirichletBoundary_;
-
- RodConfiguration dirichletValues_;
- };
-
- /** \brief Holds all data for a continuum subproblem */
- struct ContinuumData
- {
- Dune::shared_ptr<ContinuumGrid> grid_;
-
- BoundaryPatch<typename ContinuumGrid::LeafGridView> dirichletBoundary_;
-
- ContinuumConfiguration dirichletValues_;
- };
-
+ dune_static_assert(RodGrid::dimension==1, "The RodGrid has to be one-dimensional!");
+
+ static const int dim = ContinuumGrid::dimension;
+
+ typedef std::vector<RigidBodyMotion<double,3> > RodConfiguration;
+
+ typedef Dune::BlockVector<Dune::FieldVector<double,3> > ContinuumConfiguration;
+
+ /** \brief Holds all data for a rod/continuum coupling */
+ struct Coupling
+ {
+ BoundaryPatch<typename RodGrid::LeafGridView> rodInterfaceBoundary_;
+
+ BoundaryPatch<typename ContinuumGrid::LeafGridView> continuumInterfaceBoundary_;
+
+ /** \brief The orientation of the interface in the reference configuration */
+ RigidBodyMotion<double,dim> referenceInterface_;
+ };
+
+ /** \brief Holds all data for a rod subproblem */
+ struct RodData
+ {
+ Dune::shared_ptr<RodGrid> grid_;
+
+ BoundaryPatch<typename RodGrid::LeafGridView> dirichletBoundary_;
+
+ RodConfiguration dirichletValues_;
+ };
+
+ /** \brief Holds all data for a continuum subproblem */
+ struct ContinuumData
+ {
+ Dune::shared_ptr<ContinuumGrid> grid_;
+
+ BoundaryPatch<typename ContinuumGrid::LeafGridView> dirichletBoundary_;
+
+ ContinuumConfiguration dirichletValues_;
+ };
+
public:
-
- /** \brief Iterator over the rods */
- typedef typename std::map<std::string, RodData>::iterator RodIterator;
- typedef typename std::map<std::string, RodData>::const_iterator ConstRodIterator;
-
- /** \brief Iterator over the continua */
- typedef typename std::map<std::string, ContinuumData>::iterator ContinuumIterator;
- typedef typename std::map<std::string, ContinuumData>::const_iterator ConstContinuumIterator;
-
- /** \brief Iterator over the couplings */
- typedef typename std::map<std::pair<std::string,std::string>, Coupling>::const_iterator ConstCouplingIterator;
-
- /** \brief Simple const access to rod grids */
- const Dune::shared_ptr<RodGrid> rodGrid(const std::string& name) const
- {
- assert(rods_.find(name) != rods_.end());
- return rods_.find(name)->second.grid_;
- }
-
- /** \brief Simple const access to continuum grids */
- const Dune::shared_ptr<ContinuumGrid> continuumGrid(const std::string& name) const
- {
- assert(continua_.find(name) != continua_.end());
- return continua_.find(name)->second.grid_;
- }
-
- /** \brief Simple const access to continua */
- const ContinuumData continuum(const std::string& name) const
- {
- assert(continua_.find(name) != continua_.end());
- return continua_.find(name)->second;
- }
-
- /** \brief Simple const access to rods */
- const RodData rod(const std::string& name) const
- {
- assert(rods_.find(name) != rods_.end());
- return rods_.find(name)->second;
- }
-
- /** \brief Simple const access to couplings */
- const Coupling& coupling(const std::pair<std::string,std::string>& name) const
- {
- assert(couplings_.find(name) != couplings_.end());
- return couplings_.find(name)->second;
- }
-
- /////////////////////////////////////////////////////////////////////
- // Data concerning the individual rod problems
- /////////////////////////////////////////////////////////////////////
-
- /** \brief The set of rods, accessible by name (string) */
- std::map<std::string, RodData > rods_;
-
- /////////////////////////////////////////////////////////////////////
- // Data concerning the individual continuum problems
- /////////////////////////////////////////////////////////////////////
-
- /** \brief The set of continua, accessible by name (string) */
- std::map<std::string, ContinuumData> continua_;
-
- /////////////////////////////////////////////////////////////////////
- // Data about the couplings
- /////////////////////////////////////////////////////////////////////
-
- std::map<std::pair<std::string,std::string>, Coupling> couplings_;
-
+
+ /** \brief Iterator over the rods */
+ typedef typename std::map<std::string, RodData>::iterator RodIterator;
+ typedef typename std::map<std::string, RodData>::const_iterator ConstRodIterator;
+
+ /** \brief Iterator over the continua */
+ typedef typename std::map<std::string, ContinuumData>::iterator ContinuumIterator;
+ typedef typename std::map<std::string, ContinuumData>::const_iterator ConstContinuumIterator;
+
+ /** \brief Iterator over the couplings */
+ typedef typename std::map<std::pair<std::string,std::string>, Coupling>::const_iterator ConstCouplingIterator;
+
+ /** \brief Simple const access to rod grids */
+ const Dune::shared_ptr<RodGrid> rodGrid(const std::string& name) const
+ {
+ assert(rods_.find(name) != rods_.end());
+ return rods_.find(name)->second.grid_;
+ }
+
+ /** \brief Simple const access to continuum grids */
+ const Dune::shared_ptr<ContinuumGrid> continuumGrid(const std::string& name) const
+ {
+ assert(continua_.find(name) != continua_.end());
+ return continua_.find(name)->second.grid_;
+ }
+
+ /** \brief Simple const access to continua */
+ const ContinuumData continuum(const std::string& name) const
+ {
+ assert(continua_.find(name) != continua_.end());
+ return continua_.find(name)->second;
+ }
+
+ /** \brief Simple const access to rods */
+ const RodData rod(const std::string& name) const
+ {
+ assert(rods_.find(name) != rods_.end());
+ return rods_.find(name)->second;
+ }
+
+ /** \brief Simple const access to couplings */
+ const Coupling& coupling(const std::pair<std::string,std::string>& name) const
+ {
+ assert(couplings_.find(name) != couplings_.end());
+ return couplings_.find(name)->second;
+ }
+
+ /////////////////////////////////////////////////////////////////////
+ // Data concerning the individual rod problems
+ /////////////////////////////////////////////////////////////////////
+
+ /** \brief The set of rods, accessible by name (string) */
+ std::map<std::string, RodData > rods_;
+
+ /////////////////////////////////////////////////////////////////////
+ // Data concerning the individual continuum problems
+ /////////////////////////////////////////////////////////////////////
+
+ /** \brief The set of continua, accessible by name (string) */
+ std::map<std::string, ContinuumData> continua_;
+
+ /////////////////////////////////////////////////////////////////////
+ // Data about the couplings
+ /////////////////////////////////////////////////////////////////////
+
+ std::map<std::pair<std::string,std::string>, Coupling> couplings_;
+
};
#endif // ROD_CONTINUUM_COMPLEX_HH
diff --git a/dune/gfe/coupling/rodcontinuumddstep.hh b/dune/gfe/coupling/rodcontinuumddstep.hh
index bf5edb1e..be87336e 100644
--- a/dune/gfe/coupling/rodcontinuumddstep.hh
+++ b/dune/gfe/coupling/rodcontinuumddstep.hh
@@ -23,134 +23,134 @@
template <class RodGridType, class ContinuumGridType>
class RodContinuumDDStep
{
- static const int dim = ContinuumGridType::dimension;
-
- // The type used for rod configurations
- typedef std::vector<RigidBodyMotion<double,dim> > RodConfigurationType;
-
- // The type used for continuum configurations
- typedef Dune::BlockVector<Dune::FieldVector<double,dim> > VectorType;
- typedef Dune::BlockVector<Dune::FieldVector<double,dim> > ContinuumConfigurationType;
-
- typedef Dune::BlockVector<Dune::FieldVector<double,6> > RodCorrectionType;
-
- typedef Dune::BCRSMatrix<Dune::FieldMatrix<double,3,3> > MatrixType;
-
- typedef typename P1NodalBasis<typename ContinuumGridType::LeafGridView,double>::LocalFiniteElement ContinuumLocalFiniteElement;
-
+ static const int dim = ContinuumGridType::dimension;
+
+ // The type used for rod configurations
+ typedef std::vector<RigidBodyMotion<double,dim> > RodConfigurationType;
+
+ // The type used for continuum configurations
+ typedef Dune::BlockVector<Dune::FieldVector<double,dim> > VectorType;
+ typedef Dune::BlockVector<Dune::FieldVector<double,dim> > ContinuumConfigurationType;
+
+ typedef Dune::BlockVector<Dune::FieldVector<double,6> > RodCorrectionType;
+
+ typedef Dune::BCRSMatrix<Dune::FieldMatrix<double,3,3> > MatrixType;
+
+ typedef typename P1NodalBasis<typename ContinuumGridType::LeafGridView,double>::LocalFiniteElement ContinuumLocalFiniteElement;
+
public:
- /** \brief Constructor for a complex with one rod and one continuum */
- RodContinuumDDStep(const RodContinuumComplex<RodGridType,ContinuumGridType>& complex/*,
- RodAssembler<typename RodGridType::LeafGridView,3>* rodAssembler,
- RiemannianTrustRegionSolver<RodGridType,RigidBodyMotion<double,3> >* rodSolver,
- const MatrixType* stiffnessMatrix3d,
- const Dune::shared_ptr< ::LoopSolver<VectorType> > solver*/)
- : complex_(complex)
- {
+ /** \brief Constructor for a complex with one rod and one continuum */
+ RodContinuumDDStep(const RodContinuumComplex<RodGridType,ContinuumGridType>& complex /*,
+ RodAssembler<typename RodGridType::LeafGridView,3>* rodAssembler,
+ RiemannianTrustRegionSolver<RodGridType,RigidBodyMotion<double,3> >* rodSolver,
+ const MatrixType* stiffnessMatrix3d,
+ const Dune::shared_ptr< ::LoopSolver<VectorType> > solver*/)
+ : complex_(complex)
+ {
#if 0
- rods_["rod"].assembler_ = rodAssembler;
- rods_["rod"].solver_ = rodSolver;
+ rods_["rod"].assembler_ = rodAssembler;
+ rods_["rod"].solver_ = rodSolver;
- continua_["continuum"].stiffnessMatrix_ = stiffnessMatrix3d;
- continua_["continuum"].solver_ = solver;
+ continua_["continuum"].stiffnessMatrix_ = stiffnessMatrix3d;
+ continua_["continuum"].solver_ = solver;
- mergeRodDirichletAndCouplingBoundaries();
- mergeContinuumDirichletAndCouplingBoundaries();
+ mergeRodDirichletAndCouplingBoundaries();
+ mergeContinuumDirichletAndCouplingBoundaries();
#endif
- }
-
- /** \brief Do one domain decomposition step
- * \param[in,out] lambda The old and new iterate
- */
- virtual void iterate(std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3> >& lambda) = 0;
+ }
+
+ /** \brief Do one domain decomposition step
+ * \param[in,out] lambda The old and new iterate
+ */
+ virtual void iterate(std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3> >& lambda) = 0;
protected:
- std::set<std::string> rodsPerContinuum(const std::string& name) const;
-
- std::set<std::string> continuaPerRod(const std::string& name) const;
-
- /** \brief Add the content of one map to another, aborting rather than overwriting stuff
- */
- template <class X, class Y>
- static void insert(std::map<X,Y>& map1, const std::map<X,Y>& map2)
- {
- int oldSize = map1.size();
- map1.insert(map2.begin(), map2.end());
- assert(map1.size() == oldSize + map2.size());
- }
-
- //////////////////////////////////////////////////////////////////
- // Data members related to the coupled problem
- //////////////////////////////////////////////////////////////////
- const RodContinuumComplex<RodGridType,ContinuumGridType>& complex_;
+ std::set<std::string> rodsPerContinuum(const std::string& name) const;
+
+ std::set<std::string> continuaPerRod(const std::string& name) const;
+
+ /** \brief Add the content of one map to another, aborting rather than overwriting stuff
+ */
+ template <class X, class Y>
+ static void insert(std::map<X,Y>& map1, const std::map<X,Y>& map2)
+ {
+ int oldSize = map1.size();
+ map1.insert(map2.begin(), map2.end());
+ assert(map1.size() == oldSize + map2.size());
+ }
+
+ //////////////////////////////////////////////////////////////////
+ // Data members related to the coupled problem
+ //////////////////////////////////////////////////////////////////
+ const RodContinuumComplex<RodGridType,ContinuumGridType>& complex_;
#if 0
protected:
-
- //////////////////////////////////////////////////////////////////
- // Data members related to the rod problems
- //////////////////////////////////////////////////////////////////
-
- struct RodData
- {
- Dune::BitSetVector<6> dirichletAndCouplingNodes_;
-
- RodAssembler<typename RodGridType::LeafGridView,3>* assembler_;
-
- RodLocalStiffness<typename RodGridType::LeafGridView,double>* localStiffness_;
-
- RiemannianTrustRegionSolver<RodGridType,RigidBodyMotion<double,3> >* solver_;
- };
-
- /** \brief Simple const access to rods */
- const RodData& rod(const std::string& name) const
- {
- assert(rods_.find(name) != rods_.end());
- return rods_.find(name)->second;
- }
-
- std::map<std::string, RodData> rods_;
-
- typedef typename std::map<std::string, RodData>::iterator RodIterator;
+
+ //////////////////////////////////////////////////////////////////
+ // Data members related to the rod problems
+ //////////////////////////////////////////////////////////////////
+
+ struct RodData
+ {
+ Dune::BitSetVector<6> dirichletAndCouplingNodes_;
+
+ RodAssembler<typename RodGridType::LeafGridView,3>* assembler_;
+
+ RodLocalStiffness<typename RodGridType::LeafGridView,double>* localStiffness_;
+
+ RiemannianTrustRegionSolver<RodGridType,RigidBodyMotion<double,3> >* solver_;
+ };
+
+ /** \brief Simple const access to rods */
+ const RodData& rod(const std::string& name) const
+ {
+ assert(rods_.find(name) != rods_.end());
+ return rods_.find(name)->second;
+ }
+
+ std::map<std::string, RodData> rods_;
+
+ typedef typename std::map<std::string, RodData>::iterator RodIterator;
#endif
-public:
- /** \todo Should be part of RodData, too */
- mutable std::map<std::string, RodConfigurationType> rodSubdomainSolutions_;
+public:
+ /** \todo Should be part of RodData, too */
+ mutable std::map<std::string, RodConfigurationType> rodSubdomainSolutions_;
#if 0
protected:
- //////////////////////////////////////////////////////////////////
- // Data members related to the continuum problems
- //////////////////////////////////////////////////////////////////
-
- struct ContinuumData
- {
- const MatrixType* stiffnessMatrix_;
-
- Dune::shared_ptr< ::LoopSolver<VectorType> > solver_;
-
- Dune::BitSetVector<dim> dirichletAndCouplingNodes_;
-
- LocalOperatorAssembler<ContinuumGridType,
- ContinuumLocalFiniteElement,
- ContinuumLocalFiniteElement,
- Dune::FieldMatrix<double,dim,dim> >* localAssembler_;
- };
-
- /** \brief Simple const access to continua */
- const ContinuumData& continuum(const std::string& name) const
- {
- assert(continua_.find(name) != continua_.end());
- return continua_.find(name)->second;
- }
-
- std::map<std::string, ContinuumData> continua_;
-
- typedef typename std::map<std::string, ContinuumData>::iterator ContinuumIterator;
-#endif
+ //////////////////////////////////////////////////////////////////
+ // Data members related to the continuum problems
+ //////////////////////////////////////////////////////////////////
+
+ struct ContinuumData
+ {
+ const MatrixType* stiffnessMatrix_;
+
+ Dune::shared_ptr< ::LoopSolver<VectorType> > solver_;
+
+ Dune::BitSetVector<dim> dirichletAndCouplingNodes_;
+
+ LocalOperatorAssembler<ContinuumGridType,
+ ContinuumLocalFiniteElement,
+ ContinuumLocalFiniteElement,
+ Dune::FieldMatrix<double,dim,dim> >* localAssembler_;
+ };
+
+ /** \brief Simple const access to continua */
+ const ContinuumData& continuum(const std::string& name) const
+ {
+ assert(continua_.find(name) != continua_.end());
+ return continua_.find(name)->second;
+ }
+
+ std::map<std::string, ContinuumData> continua_;
+
+ typedef typename std::map<std::string, ContinuumData>::iterator ContinuumIterator;
+#endif
public:
- /** \todo Should be part of ContinuumData, too */
- mutable std::map<std::string, ContinuumConfigurationType> continuumSubdomainSolutions_;
+ /** \todo Should be part of ContinuumData, too */
+ mutable std::map<std::string, ContinuumConfigurationType> continuumSubdomainSolutions_;
};
@@ -159,28 +159,28 @@ template <class RodGridType, class ContinuumGridType>
std::set<std::string> RodContinuumDDStep<RodGridType,ContinuumGridType>::
rodsPerContinuum(const std::string& name) const
{
- std::set<std::string> result;
-
- for (typename RodContinuumComplex<RodGridType,ContinuumGridType>::ConstCouplingIterator it = complex_.couplings_.begin();
- it!=complex_.couplings_.end(); ++it)
- if (it->first.second == name)
- result.insert(it->first.first);
-
- return result;
+ std::set<std::string> result;
+
+ for (typename RodContinuumComplex<RodGridType,ContinuumGridType>::ConstCouplingIterator it = complex_.couplings_.begin();
+ it!=complex_.couplings_.end(); ++it)
+ if (it->first.second == name)
+ result.insert(it->first.first);
+
+ return result;
}
template <class RodGridType, class ContinuumGridType>
std::set<std::string> RodContinuumDDStep<RodGridType,ContinuumGridType>::
continuaPerRod(const std::string& name) const
{
- std::set<std::string> result;
-
- for (typename RodContinuumComplex<RodGridType,ContinuumGridType>::ConstCouplingIterator it = complex_.couplings_.begin();
- it!=complex_.couplings_.end(); ++it)
- if (it->first.first == name)
- result.insert(it->first.second);
-
- return result;
+ std::set<std::string> result;
+
+ for (typename RodContinuumComplex<RodGridType,ContinuumGridType>::ConstCouplingIterator it = complex_.couplings_.begin();
+ it!=complex_.couplings_.end(); ++it)
+ if (it->first.first == name)
+ result.insert(it->first.second);
+
+ return result;
}
#endif
diff --git a/dune/gfe/coupling/rodcontinuumfixedpointstep.hh b/dune/gfe/coupling/rodcontinuumfixedpointstep.hh
index b41f365a..f8909471 100644
--- a/dune/gfe/coupling/rodcontinuumfixedpointstep.hh
+++ b/dune/gfe/coupling/rodcontinuumfixedpointstep.hh
@@ -25,179 +25,179 @@
*/
template <class RodGridType, class ContinuumGridType>
class RodContinuumFixedPointStep
-: public RodContinuumDDStep<RodGridType,ContinuumGridType>
+ : public RodContinuumDDStep<RodGridType,ContinuumGridType>
{
- static const int dim = ContinuumGridType::dimension;
-
- // The type used for rod configurations
- typedef std::vector<RigidBodyMotion<double,dim> > RodConfigurationType;
-
- // The type used for continuum configurations
- typedef Dune::BlockVector<Dune::FieldVector<double,dim> > VectorType;
- typedef Dune::BlockVector<Dune::FieldVector<double,dim> > ContinuumConfigurationType;
-
- typedef Dune::BlockVector<Dune::FieldVector<double,6> > RodCorrectionType;
-
- typedef Dune::BCRSMatrix<Dune::FieldMatrix<double,3,3> > MatrixType;
-
- typedef typename P1NodalBasis<typename ContinuumGridType::LeafGridView,double>::LocalFiniteElement ContinuumLocalFiniteElement;
-
- typedef BoundaryPatch<typename RodGridType::LeafGridView> RodLeafBoundaryPatch;
- typedef BoundaryPatch<typename ContinuumGridType::LeafGridView> ContinuumLeafBoundaryPatch;
-
-public:
-
- /** \brief Constructor for a complex with one rod and one continuum */
- RodContinuumFixedPointStep(const RodContinuumComplex<RodGridType,ContinuumGridType>& complex,
- double damping,
- RodAssembler<typename RodGridType::LeafGridView,3>* rodAssembler,
- RiemannianTrustRegionSolver<RodGridType,RigidBodyMotion<double,3> >* rodSolver,
- const MatrixType* stiffnessMatrix3d,
- const Dune::shared_ptr< ::LoopSolver<VectorType> > solver)
- : RodContinuumDDStep<RodGridType,ContinuumGridType>(complex),
- damping_(damping)
- {
- rods_["rod"].assembler_ = rodAssembler;
- rods_["rod"].solver_ = rodSolver;
-
- continua_["continuum"].stiffnessMatrix_ = stiffnessMatrix3d;
- continua_["continuum"].solver_ = solver;
-
- mergeRodDirichletAndCouplingBoundaries();
- mergeContinuumDirichletAndCouplingBoundaries();
- }
+ static const int dim = ContinuumGridType::dimension;
- /** \brief Constructor for a general complex */
- RodContinuumFixedPointStep(const RodContinuumComplex<RodGridType,ContinuumGridType>& complex,
- double damping,
- const std::map<std::string,RodAssembler<typename RodGridType::LeafGridView,3>*>& rodAssembler,
- const std::map<std::string,RiemannianTrustRegionSolver<RodGridType,RigidBodyMotion<double,3> >*>& rodSolver,
- const std::map<std::string,const MatrixType*>& stiffnessMatrix3d,
- const std::map<std::string, const Dune::shared_ptr< ::LoopSolver<VectorType> > >& solver)
- : RodContinuumDDStep<RodGridType,ContinuumGridType>(complex),
- damping_(damping)
- {
- ///////////////////////////////////////////////////////////////////////////////////
- // Rod-related data
- ///////////////////////////////////////////////////////////////////////////////////
- for (typename std::map<std::string,RodAssembler<typename RodGridType::LeafGridView,3>*>::const_iterator it = rodAssembler.begin();
- it != rodAssembler.end();
- ++it)
- rods_[it->first].assembler_ = it->second;
-
- for (typename std::map<std::string,RiemannianTrustRegionSolver<RodGridType,RigidBodyMotion<double,3> >*>::const_iterator it = rodSolver.begin();
- it != rodSolver.end();
- ++it)
- rods_[it->first].solver_ = it->second;
-
- ///////////////////////////////////////////////////////////////////////////////////
- // Continuum-related data
- ///////////////////////////////////////////////////////////////////////////////////
- for (typename std::map<std::string,const MatrixType*>::const_iterator it = stiffnessMatrix3d.begin();
- it != stiffnessMatrix3d.end();
- ++it)
- continua_[it->first].stiffnessMatrix_ = it->second;
-
- for (typename std::map<std::string,const Dune::shared_ptr< ::LoopSolver<VectorType> > >::const_iterator it = solver.begin();
- it != solver.end();
- ++it)
- continua_[it->first].solver_ = it->second;
-
- mergeRodDirichletAndCouplingBoundaries();
- mergeContinuumDirichletAndCouplingBoundaries();
- }
+ // The type used for rod configurations
+ typedef std::vector<RigidBodyMotion<double,dim> > RodConfigurationType;
- void mergeRodDirichletAndCouplingBoundaries();
+ // The type used for continuum configurations
+ typedef Dune::BlockVector<Dune::FieldVector<double,dim> > VectorType;
+ typedef Dune::BlockVector<Dune::FieldVector<double,dim> > ContinuumConfigurationType;
- void mergeContinuumDirichletAndCouplingBoundaries();
+ typedef Dune::BlockVector<Dune::FieldVector<double,6> > RodCorrectionType;
-
- /** \brief Do one fixed-point step
- * \param[in,out] lambda The old and new iterate
- */
- void iterate(std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3> >& lambda);
+ typedef Dune::BCRSMatrix<Dune::FieldMatrix<double,3,3> > MatrixType;
+
+ typedef typename P1NodalBasis<typename ContinuumGridType::LeafGridView,double>::LocalFiniteElement ContinuumLocalFiniteElement;
+
+ typedef BoundaryPatch<typename RodGridType::LeafGridView> RodLeafBoundaryPatch;
+ typedef BoundaryPatch<typename ContinuumGridType::LeafGridView> ContinuumLeafBoundaryPatch;
+
+public:
+
+ /** \brief Constructor for a complex with one rod and one continuum */
+ RodContinuumFixedPointStep(const RodContinuumComplex<RodGridType,ContinuumGridType>& complex,
+ double damping,
+ RodAssembler<typename RodGridType::LeafGridView,3>* rodAssembler,
+ RiemannianTrustRegionSolver<RodGridType,RigidBodyMotion<double,3> >* rodSolver,
+ const MatrixType* stiffnessMatrix3d,
+ const Dune::shared_ptr< ::LoopSolver<VectorType> > solver)
+ : RodContinuumDDStep<RodGridType,ContinuumGridType>(complex),
+ damping_(damping)
+ {
+ rods_["rod"].assembler_ = rodAssembler;
+ rods_["rod"].solver_ = rodSolver;
+
+ continua_["continuum"].stiffnessMatrix_ = stiffnessMatrix3d;
+ continua_["continuum"].solver_ = solver;
+
+ mergeRodDirichletAndCouplingBoundaries();
+ mergeContinuumDirichletAndCouplingBoundaries();
+ }
+
+ /** \brief Constructor for a general complex */
+ RodContinuumFixedPointStep(const RodContinuumComplex<RodGridType,ContinuumGridType>& complex,
+ double damping,
+ const std::map<std::string,RodAssembler<typename RodGridType::LeafGridView,3>*>& rodAssembler,
+ const std::map<std::string,RiemannianTrustRegionSolver<RodGridType,RigidBodyMotion<double,3> >*>& rodSolver,
+ const std::map<std::string,const MatrixType*>& stiffnessMatrix3d,
+ const std::map<std::string, const Dune::shared_ptr< ::LoopSolver<VectorType> > >& solver)
+ : RodContinuumDDStep<RodGridType,ContinuumGridType>(complex),
+ damping_(damping)
+ {
+ ///////////////////////////////////////////////////////////////////////////////////
+ // Rod-related data
+ ///////////////////////////////////////////////////////////////////////////////////
+ for (typename std::map<std::string,RodAssembler<typename RodGridType::LeafGridView,3>*>::const_iterator it = rodAssembler.begin();
+ it != rodAssembler.end();
+ ++it)
+ rods_[it->first].assembler_ = it->second;
+
+ for (typename std::map<std::string,RiemannianTrustRegionSolver<RodGridType,RigidBodyMotion<double,3> >*>::const_iterator it = rodSolver.begin();
+ it != rodSolver.end();
+ ++it)
+ rods_[it->first].solver_ = it->second;
+
+ ///////////////////////////////////////////////////////////////////////////////////
+ // Continuum-related data
+ ///////////////////////////////////////////////////////////////////////////////////
+ for (typename std::map<std::string,const MatrixType*>::const_iterator it = stiffnessMatrix3d.begin();
+ it != stiffnessMatrix3d.end();
+ ++it)
+ continua_[it->first].stiffnessMatrix_ = it->second;
+
+ for (typename std::map<std::string,const Dune::shared_ptr< ::LoopSolver<VectorType> > >::const_iterator it = solver.begin();
+ it != solver.end();
+ ++it)
+ continua_[it->first].solver_ = it->second;
+
+ mergeRodDirichletAndCouplingBoundaries();
+ mergeContinuumDirichletAndCouplingBoundaries();
+ }
+
+ void mergeRodDirichletAndCouplingBoundaries();
+
+ void mergeContinuumDirichletAndCouplingBoundaries();
+
+
+ /** \brief Do one fixed-point step
+ * \param[in,out] lambda The old and new iterate
+ */
+ void iterate(std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3> >& lambda);
protected:
-
- std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3>::TangentVector>
- rodDirichletToNeumannMap(const std::string& rodName,
- const std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> >& lambda) const;
-
- std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3>::TangentVector>
- rodDirichletToNeumannMap(const std::string& rodName,
- const std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> >& lambda,
- const RodConfigurationType& initialRodX) const;
-
- std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> >
- continuumNeumannToDirichletMap(const std::string& continuumName,
- const std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3>::TangentVector>& forceTorque,
- const std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> >& centerOfTorque) const;
-
- //////////////////////////////////////////////////////////////////
- // Data members related to the coupled problem
- //////////////////////////////////////////////////////////////////
-
- /** \brief Damping factor */
- double damping_;
-
+
+ std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3>::TangentVector>
+ rodDirichletToNeumannMap(const std::string& rodName,
+ const std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> >& lambda) const;
+
+ std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3>::TangentVector>
+ rodDirichletToNeumannMap(const std::string& rodName,
+ const std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> >& lambda,
+ const RodConfigurationType& initialRodX) const;
+
+ std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> >
+ continuumNeumannToDirichletMap(const std::string& continuumName,
+ const std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3>::TangentVector>& forceTorque,
+ const std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> >& centerOfTorque) const;
+
+ //////////////////////////////////////////////////////////////////
+ // Data members related to the coupled problem
+ //////////////////////////////////////////////////////////////////
+
+ /** \brief Damping factor */
+ double damping_;
+
protected:
-
- //////////////////////////////////////////////////////////////////
- // Data members related to the rod problems
- //////////////////////////////////////////////////////////////////
-
- struct RodData
- {
- Dune::BitSetVector<6> dirichletAndCouplingNodes_;
-
- RodAssembler<typename RodGridType::LeafGridView,3>* assembler_;
-
- RodLocalStiffness<typename RodGridType::LeafGridView,double>* localStiffness_;
-
- RiemannianTrustRegionSolver<RodGridType,RigidBodyMotion<double,3> >* solver_;
- };
-
- /** \brief Simple const access to rods */
- const RodData& rod(const std::string& name) const
- {
- assert(rods_.find(name) != rods_.end());
- return rods_.find(name)->second;
- }
- std::map<std::string, RodData> rods_;
-
- typedef typename std::map<std::string, RodData>::iterator RodIterator;
-
+ //////////////////////////////////////////////////////////////////
+ // Data members related to the rod problems
+ //////////////////////////////////////////////////////////////////
+
+ struct RodData
+ {
+ Dune::BitSetVector<6> dirichletAndCouplingNodes_;
+
+ RodAssembler<typename RodGridType::LeafGridView,3>* assembler_;
+
+ RodLocalStiffness<typename RodGridType::LeafGridView,double>* localStiffness_;
+
+ RiemannianTrustRegionSolver<RodGridType,RigidBodyMotion<double,3> >* solver_;
+ };
+
+ /** \brief Simple const access to rods */
+ const RodData& rod(const std::string& name) const
+ {
+ assert(rods_.find(name) != rods_.end());
+ return rods_.find(name)->second;
+ }
+
+ std::map<std::string, RodData> rods_;
+
+ typedef typename std::map<std::string, RodData>::iterator RodIterator;
+
protected:
- //////////////////////////////////////////////////////////////////
- // Data members related to the continuum problems
- //////////////////////////////////////////////////////////////////
-
- struct ContinuumData
- {
- const MatrixType* stiffnessMatrix_;
-
- Dune::shared_ptr< ::LoopSolver<VectorType> > solver_;
-
- Dune::BitSetVector<dim> dirichletAndCouplingNodes_;
-
- LocalOperatorAssembler<ContinuumGridType,
- ContinuumLocalFiniteElement,
- ContinuumLocalFiniteElement,
- Dune::FieldMatrix<double,dim,dim> >* localAssembler_;
- };
-
- /** \brief Simple const access to continua */
- const ContinuumData& continuum(const std::string& name) const
- {
- assert(continua_.find(name) != continua_.end());
- return continua_.find(name)->second;
- }
+ //////////////////////////////////////////////////////////////////
+ // Data members related to the continuum problems
+ //////////////////////////////////////////////////////////////////
+
+ struct ContinuumData
+ {
+ const MatrixType* stiffnessMatrix_;
+
+ Dune::shared_ptr< ::LoopSolver<VectorType> > solver_;
+
+ Dune::BitSetVector<dim> dirichletAndCouplingNodes_;
+
+ LocalOperatorAssembler<ContinuumGridType,
+ ContinuumLocalFiniteElement,
+ ContinuumLocalFiniteElement,
+ Dune::FieldMatrix<double,dim,dim> >* localAssembler_;
+ };
+
+ /** \brief Simple const access to continua */
+ const ContinuumData& continuum(const std::string& name) const
+ {
+ assert(continua_.find(name) != continua_.end());
+ return continua_.find(name)->second;
+ }
- std::map<std::string, ContinuumData> continua_;
+ std::map<std::string, ContinuumData> continua_;
+
+ typedef typename std::map<std::string, ContinuumData>::iterator ContinuumIterator;
- typedef typename std::map<std::string, ContinuumData>::iterator ContinuumIterator;
-
};
@@ -205,55 +205,55 @@ template <class RodGridType, class ContinuumGridType>
void RodContinuumFixedPointStep<RodGridType,ContinuumGridType>::
mergeRodDirichletAndCouplingBoundaries()
{
- ////////////////////////////////////////////////////////////////////////////////////
- // For each rod, merge the Dirichlet boundary with all interface boundaries
- //
- // Currently, we can really only solve rod problems with complete Dirichlet
- // boundary. Hence there are more direct ways to construct the
- // dirichletAndCouplingNodes field. Yet like to keep the analogy to the continuum
- // problem. And maybe one day we have a more flexible rod solver, too.
- ////////////////////////////////////////////////////////////////////////////////////
-
- for (RodIterator rIt = rods_.begin(); rIt != rods_.end(); ++rIt) {
-
- // name of the current rod
- const std::string& name = rIt->first;
-
- // short-cut to avoid frequent map look-up
- Dune::BitSetVector<6>& dirichletAndCouplingNodes = rods_[name].dirichletAndCouplingNodes_;
-
- dirichletAndCouplingNodes.resize(this->complex_.rodGrid(name)->size(1));
-
- // first copy the true Dirichlet boundary
- const RodLeafBoundaryPatch& dirichletBoundary = this->complex_.rods_.find(name)->second.dirichletBoundary_;
-
- for (int i=0; i<dirichletAndCouplingNodes.size(); i++)
- dirichletAndCouplingNodes[i] = dirichletBoundary.containsVertex(i);
-
- // get the names of all the continua that we couple with
- std::set<std::string> continuumNames = this->continuaPerRod(name);
-
- for (std::set<std::string>::const_iterator cIt = continuumNames.begin();
- cIt != continuumNames.end();
- ++cIt) {
-
- const RodLeafBoundaryPatch& rodInterfaceBoundary
- = this->complex_.coupling(std::make_pair(name,*cIt)).rodInterfaceBoundary_;
-
- /** \todo Use the BoundaryPatch iterator here, for increased efficiency */
- for (int i=0; i<dirichletAndCouplingNodes.size(); i++) {
- bool v = rodInterfaceBoundary.containsVertex(i);
- for (int j=0; j<6; j++)
- dirichletAndCouplingNodes[i][j] = dirichletAndCouplingNodes[i][j] or v;
- }
-
- }
-
- // We can only handle rod problems with a full Dirichlet boundary
- assert(dirichletAndCouplingNodes.count()==12);
-
+ ////////////////////////////////////////////////////////////////////////////////////
+ // For each rod, merge the Dirichlet boundary with all interface boundaries
+ //
+ // Currently, we can really only solve rod problems with complete Dirichlet
+ // boundary. Hence there are more direct ways to construct the
+ // dirichletAndCouplingNodes field. Yet like to keep the analogy to the continuum
+ // problem. And maybe one day we have a more flexible rod solver, too.
+ ////////////////////////////////////////////////////////////////////////////////////
+
+ for (RodIterator rIt = rods_.begin(); rIt != rods_.end(); ++rIt) {
+
+ // name of the current rod
+ const std::string& name = rIt->first;
+
+ // short-cut to avoid frequent map look-up
+ Dune::BitSetVector<6>& dirichletAndCouplingNodes = rods_[name].dirichletAndCouplingNodes_;
+
+ dirichletAndCouplingNodes.resize(this->complex_.rodGrid(name)->size(1));
+
+ // first copy the true Dirichlet boundary
+ const RodLeafBoundaryPatch& dirichletBoundary = this->complex_.rods_.find(name)->second.dirichletBoundary_;
+
+ for (int i=0; i<dirichletAndCouplingNodes.size(); i++)
+ dirichletAndCouplingNodes[i] = dirichletBoundary.containsVertex(i);
+
+ // get the names of all the continua that we couple with
+ std::set<std::string> continuumNames = this->continuaPerRod(name);
+
+ for (std::set<std::string>::const_iterator cIt = continuumNames.begin();
+ cIt != continuumNames.end();
+ ++cIt) {
+
+ const RodLeafBoundaryPatch& rodInterfaceBoundary
+ = this->complex_.coupling(std::make_pair(name,*cIt)).rodInterfaceBoundary_;
+
+ /** \todo Use the BoundaryPatch iterator here, for increased efficiency */
+ for (int i=0; i<dirichletAndCouplingNodes.size(); i++) {
+ bool v = rodInterfaceBoundary.containsVertex(i);
+ for (int j=0; j<6; j++)
+ dirichletAndCouplingNodes[i][j] = dirichletAndCouplingNodes[i][j] or v;
+ }
+
}
-
+
+ // We can only handle rod problems with a full Dirichlet boundary
+ assert(dirichletAndCouplingNodes.count()==12);
+
+ }
+
}
@@ -261,122 +261,122 @@ template <class RodGridType, class ContinuumGridType>
void RodContinuumFixedPointStep<RodGridType,ContinuumGridType>::
mergeContinuumDirichletAndCouplingBoundaries()
{
- ////////////////////////////////////////////////////////////////////////////////////
- // For each continuum, merge the Dirichlet boundary with all interface boundaries
- ////////////////////////////////////////////////////////////////////////////////////
-
- for (ContinuumIterator cIt = continua_.begin(); cIt != continua_.end(); ++cIt) {
-
- // name of the current continuum
- const std::string& name = cIt->first;
-
- // short-cut to avoid frequent map look-up
- Dune::BitSetVector<dim>& dirichletAndCouplingNodes = continua_[name].dirichletAndCouplingNodes_;
-
- dirichletAndCouplingNodes.resize(this->complex_.continuumGrid(name)->size(dim));
-
- // first copy the true Dirichlet boundary
- const ContinuumLeafBoundaryPatch& dirichletBoundary = this->complex_.continua_.find(name)->second.dirichletBoundary_;
-
- for (int i=0; i<dirichletAndCouplingNodes.size(); i++)
- dirichletAndCouplingNodes[i] = dirichletBoundary.containsVertex(i);
-
- // get the names of all the rods that we couple with
- std::set<std::string> rodNames = this->rodsPerContinuum(name);
-
- for (std::set<std::string>::const_iterator rIt = rodNames.begin();
- rIt != rodNames.end();
- ++rIt) {
-
- const ContinuumLeafBoundaryPatch& continuumInterfaceBoundary
- = this->complex_.coupling(std::make_pair(*rIt,name)).continuumInterfaceBoundary_;
-
- /** \todo Use the BoundaryPatch iterator here, for increased efficiency */
- for (int i=0; i<dirichletAndCouplingNodes.size(); i++) {
- bool v = continuumInterfaceBoundary.containsVertex(i);
- for (int j=0; j<dim; j++)
- dirichletAndCouplingNodes[i][j] = dirichletAndCouplingNodes[i][j] or v;
- }
-
- }
-
+ ////////////////////////////////////////////////////////////////////////////////////
+ // For each continuum, merge the Dirichlet boundary with all interface boundaries
+ ////////////////////////////////////////////////////////////////////////////////////
+
+ for (ContinuumIterator cIt = continua_.begin(); cIt != continua_.end(); ++cIt) {
+
+ // name of the current continuum
+ const std::string& name = cIt->first;
+
+ // short-cut to avoid frequent map look-up
+ Dune::BitSetVector<dim>& dirichletAndCouplingNodes = continua_[name].dirichletAndCouplingNodes_;
+
+ dirichletAndCouplingNodes.resize(this->complex_.continuumGrid(name)->size(dim));
+
+ // first copy the true Dirichlet boundary
+ const ContinuumLeafBoundaryPatch& dirichletBoundary = this->complex_.continua_.find(name)->second.dirichletBoundary_;
+
+ for (int i=0; i<dirichletAndCouplingNodes.size(); i++)
+ dirichletAndCouplingNodes[i] = dirichletBoundary.containsVertex(i);
+
+ // get the names of all the rods that we couple with
+ std::set<std::string> rodNames = this->rodsPerContinuum(name);
+
+ for (std::set<std::string>::const_iterator rIt = rodNames.begin();
+ rIt != rodNames.end();
+ ++rIt) {
+
+ const ContinuumLeafBoundaryPatch& continuumInterfaceBoundary
+ = this->complex_.coupling(std::make_pair(*rIt,name)).continuumInterfaceBoundary_;
+
+ /** \todo Use the BoundaryPatch iterator here, for increased efficiency */
+ for (int i=0; i<dirichletAndCouplingNodes.size(); i++) {
+ bool v = continuumInterfaceBoundary.containsVertex(i);
+ for (int j=0; j<dim; j++)
+ dirichletAndCouplingNodes[i][j] = dirichletAndCouplingNodes[i][j] or v;
+ }
+
}
-
+
+ }
+
}
template <class RodGridType, class ContinuumGridType>
std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3>::TangentVector> RodContinuumFixedPointStep<RodGridType,ContinuumGridType>::
-rodDirichletToNeumannMap(const std::string& rodName,
- const std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> >& lambda) const
+rodDirichletToNeumannMap(const std::string& rodName,
+ const std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> >& lambda) const
{
- // container for the subdomain solution
- RodConfigurationType& rodX = this->rodSubdomainSolutions_[rodName];
- rodX.resize(this->complex_.rodGrid(rodName)->size(1));
-
- ///////////////////////////////////////////////////////////
- // Set the complete set of Dirichlet values
- ///////////////////////////////////////////////////////////
- const RodLeafBoundaryPatch& dirichletBoundary = this->complex_.rod(rodName).dirichletBoundary_;
- const RodConfigurationType& dirichletValues = this->complex_.rod(rodName).dirichletValues_;
-
+ // container for the subdomain solution
+ RodConfigurationType& rodX = this->rodSubdomainSolutions_[rodName];
+ rodX.resize(this->complex_.rodGrid(rodName)->size(1));
+
+ ///////////////////////////////////////////////////////////
+ // Set the complete set of Dirichlet values
+ ///////////////////////////////////////////////////////////
+ const RodLeafBoundaryPatch& dirichletBoundary = this->complex_.rod(rodName).dirichletBoundary_;
+ const RodConfigurationType& dirichletValues = this->complex_.rod(rodName).dirichletValues_;
+
+ for (size_t i=0; i<rodX.size(); i++)
+ if (dirichletBoundary.containsVertex(i))
+ rodX[i] = dirichletValues[i];
+
+ typename std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> >::const_iterator it = lambda.begin();
+ for (; it!=lambda.end(); ++it) {
+
+ const std::pair<std::string,std::string>& couplingName = it->first;
+
+ if (couplingName.first != rodName)
+ continue;
+
+ // Use \lambda as a Dirichlet value for the rod
+ const RodLeafBoundaryPatch& interfaceBoundary = this->complex_.coupling(couplingName).rodInterfaceBoundary_;
+
+ /** \todo Use the BoundaryPatch iterator, which will be a lot faster
+ * once we use EntitySeed for its implementation
+ */
for (size_t i=0; i<rodX.size(); i++)
- if (dirichletBoundary.containsVertex(i))
- rodX[i] = dirichletValues[i];
-
- typename std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> >::const_iterator it = lambda.begin();
- for (; it!=lambda.end(); ++it) {
-
- const std::pair<std::string,std::string>& couplingName = it->first;
-
- if (couplingName.first != rodName)
- continue;
-
- // Use \lambda as a Dirichlet value for the rod
- const RodLeafBoundaryPatch& interfaceBoundary = this->complex_.coupling(couplingName).rodInterfaceBoundary_;
-
- /** \todo Use the BoundaryPatch iterator, which will be a lot faster
- * once we use EntitySeed for its implementation
- */
- for (size_t i=0; i<rodX.size(); i++)
- if (interfaceBoundary.containsVertex(i))
- rodX[i] = it->second;
- }
-
- // Set the correct Dirichlet nodes
- rod(rodName).solver_->setIgnoreNodes(rod(rodName).dirichletAndCouplingNodes_);
-
- ////////////////////////////////////////////////////////////////////////////////
- // Solve the Dirichlet problem
- ////////////////////////////////////////////////////////////////////////////////
-
- // Set initial iterate by interpolating between the Dirichlet values
- RodFactory<typename RodGridType::LeafGridView> rodFactory(this->complex_.rodGrid(rodName)->leafGridView());
- rodFactory.create(rodX);
-
- rod(rodName).solver_->setInitialSolution(rodX);
-
- // Solve the Dirichlet problem
- rod(rodName).solver_->solve();
-
- rodX = rod(rodName).solver_->getSol();
-
- // Extract Neumann values
- std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3>::TangentVector > result;
-
- for (it = lambda.begin(); it!=lambda.end(); ++it) {
-
- const std::pair<std::string,std::string>& couplingName = it->first;
-
- if (couplingName.first != rodName)
- continue;
-
- const RodLeafBoundaryPatch& couplingBoundary = this->complex_.coupling(couplingName).rodInterfaceBoundary_;
-
- result[couplingName] = rod(rodName).assembler_->getResultantForce(couplingBoundary, rodX);
- }
-
- return result;
+ if (interfaceBoundary.containsVertex(i))
+ rodX[i] = it->second;
+ }
+
+ // Set the correct Dirichlet nodes
+ rod(rodName).solver_->setIgnoreNodes(rod(rodName).dirichletAndCouplingNodes_);
+
+ ////////////////////////////////////////////////////////////////////////////////
+ // Solve the Dirichlet problem
+ ////////////////////////////////////////////////////////////////////////////////
+
+ // Set initial iterate by interpolating between the Dirichlet values
+ RodFactory<typename RodGridType::LeafGridView> rodFactory(this->complex_.rodGrid(rodName)->leafGridView());
+ rodFactory.create(rodX);
+
+ rod(rodName).solver_->setInitialSolution(rodX);
+
+ // Solve the Dirichlet problem
+ rod(rodName).solver_->solve();
+
+ rodX = rod(rodName).solver_->getSol();
+
+ // Extract Neumann values
+ std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3>::TangentVector > result;
+
+ for (it = lambda.begin(); it!=lambda.end(); ++it) {
+
+ const std::pair<std::string,std::string>& couplingName = it->first;
+
+ if (couplingName.first != rodName)
+ continue;
+
+ const RodLeafBoundaryPatch& couplingBoundary = this->complex_.coupling(couplingName).rodInterfaceBoundary_;
+
+ result[couplingName] = rod(rodName).assembler_->getResultantForce(couplingBoundary, rodX);
+ }
+
+ return result;
}
@@ -384,258 +384,258 @@ rodDirichletToNeumannMap(const std::string& rodName,
template <class RodGridType, class ContinuumGridType>
std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3>::TangentVector> RodContinuumFixedPointStep<RodGridType,ContinuumGridType>::
-rodDirichletToNeumannMap(const std::string& rodName,
+rodDirichletToNeumannMap(const std::string& rodName,
const std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> >& lambda,
const RodConfigurationType& initialRodX ) const
{
- // container for the subdomain solution
- RodConfigurationType& rodX = this->rodSubdomainSolutions_[rodName];
- rodX.resize(this->complex_.rodGrid(rodName)->size(1));
-
- rodX = initialRodX;
-
- ///////////////////////////////////////////////////////////
- // Set the complete set of Dirichlet values
- ///////////////////////////////////////////////////////////
- const RodLeafBoundaryPatch& dirichletBoundary = this->complex_.rod(rodName).dirichletBoundary_;
- const RodConfigurationType& dirichletValues = this->complex_.rod(rodName).dirichletValues_;
-
+ // container for the subdomain solution
+ RodConfigurationType& rodX = this->rodSubdomainSolutions_[rodName];
+ rodX.resize(this->complex_.rodGrid(rodName)->size(1));
+
+ rodX = initialRodX;
+
+ ///////////////////////////////////////////////////////////
+ // Set the complete set of Dirichlet values
+ ///////////////////////////////////////////////////////////
+ const RodLeafBoundaryPatch& dirichletBoundary = this->complex_.rod(rodName).dirichletBoundary_;
+ const RodConfigurationType& dirichletValues = this->complex_.rod(rodName).dirichletValues_;
+
+ for (size_t i=0; i<rodX.size(); i++)
+ if (dirichletBoundary.containsVertex(i))
+ rodX[i] = dirichletValues[i];
+
+ typename std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> >::const_iterator it = lambda.begin();
+ for (; it!=lambda.end(); ++it) {
+
+ const std::pair<std::string,std::string>& couplingName = it->first;
+
+ if (couplingName.first != rodName)
+ continue;
+
+ // Use \lambda as a Dirichlet value for the rod
+ const RodLeafBoundaryPatch& interfaceBoundary = this->complex_.coupling(couplingName).rodInterfaceBoundary_;
+
+ /** \todo Use the BoundaryPatch iterator, which will be a lot faster
+ * once we use EntitySeed for its implementation
+ */
for (size_t i=0; i<rodX.size(); i++)
- if (dirichletBoundary.containsVertex(i))
- rodX[i] = dirichletValues[i];
-
- typename std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> >::const_iterator it = lambda.begin();
- for (; it!=lambda.end(); ++it) {
-
- const std::pair<std::string,std::string>& couplingName = it->first;
-
- if (couplingName.first != rodName)
- continue;
-
- // Use \lambda as a Dirichlet value for the rod
- const RodLeafBoundaryPatch& interfaceBoundary = this->complex_.coupling(couplingName).rodInterfaceBoundary_;
-
- /** \todo Use the BoundaryPatch iterator, which will be a lot faster
- * once we use EntitySeed for its implementation
- */
- for (size_t i=0; i<rodX.size(); i++)
- if (interfaceBoundary.containsVertex(i))
- rodX[i] = it->second;
- }
-
- // Set the correct Dirichlet nodes
- rod(rodName).solver_->setIgnoreNodes(rod(rodName).dirichletAndCouplingNodes_);
-
- ////////////////////////////////////////////////////////////////////////////////
- // Solve the Dirichlet problem
- ////////////////////////////////////////////////////////////////////////////////
-
-
- rod(rodName).solver_->setInitialSolution(rodX);
-
- // Solve the Dirichlet problem
- rod(rodName).solver_->solve();
-
- rodX = rod(rodName).solver_->getSol();
-
- // Extract Neumann values
- std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3>::TangentVector > result;
-
- for (it = lambda.begin(); it!=lambda.end(); ++it) {
-
- const std::pair<std::string,std::string>& couplingName = it->first;
-
- if (couplingName.first != rodName)
- continue;
-
- const RodLeafBoundaryPatch& couplingBoundary = this->complex_.coupling(couplingName).rodInterfaceBoundary_;
-
- result[couplingName] = rod(rodName).assembler_->getResultantForce(couplingBoundary, rodX);
- }
-
- return result;
+ if (interfaceBoundary.containsVertex(i))
+ rodX[i] = it->second;
+ }
+
+ // Set the correct Dirichlet nodes
+ rod(rodName).solver_->setIgnoreNodes(rod(rodName).dirichletAndCouplingNodes_);
+
+ ////////////////////////////////////////////////////////////////////////////////
+ // Solve the Dirichlet problem
+ ////////////////////////////////////////////////////////////////////////////////
+
+
+ rod(rodName).solver_->setInitialSolution(rodX);
+
+ // Solve the Dirichlet problem
+ rod(rodName).solver_->solve();
+
+ rodX = rod(rodName).solver_->getSol();
+
+ // Extract Neumann values
+ std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3>::TangentVector > result;
+
+ for (it = lambda.begin(); it!=lambda.end(); ++it) {
+
+ const std::pair<std::string,std::string>& couplingName = it->first;
+
+ if (couplingName.first != rodName)
+ continue;
+
+ const RodLeafBoundaryPatch& couplingBoundary = this->complex_.coupling(couplingName).rodInterfaceBoundary_;
+
+ result[couplingName] = rod(rodName).assembler_->getResultantForce(couplingBoundary, rodX);
+ }
+
+ return result;
}
template <class RodGridType, class ContinuumGridType>
-std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> >
+std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> >
RodContinuumFixedPointStep<RodGridType,ContinuumGridType>::
continuumNeumannToDirichletMap(const std::string& continuumName,
const std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3>::TangentVector>& forceTorque,
const std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> >& centerOfTorque) const
{
- ////////////////////////////////////////////////////
- // Assemble the problem
- ////////////////////////////////////////////////////
-
- typedef P1NodalBasis<typename ContinuumGridType::LeafGridView,double> P1Basis;
- const ContinuumLeafBoundaryPatch& dirichletBoundary = this->complex_.continuum(continuumName).dirichletBoundary_;
- P1Basis basis(dirichletBoundary.gridView());
-
- const MatrixType& stiffnessMatrix = *continuum(continuumName).stiffnessMatrix_;
-
- /////////////////////////////////////////////////////////////////////
- // Turn the input force and torque into a Neumann boundary field
- /////////////////////////////////////////////////////////////////////
-
- // The weak form of the volume and Neumann data
- /** \brief Not implemented yet! */
- VectorType rhs(this->complex_.continuumGrid(continuumName)->size(dim));
- rhs = 0;
-
- typedef typename std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3>::TangentVector>::const_iterator ForceIterator;
-
- for (ForceIterator it = forceTorque.begin(); it!=forceTorque.end(); ++it) {
-
- const std::pair<std::string,std::string>& couplingName = it->first;
-
- if (couplingName.second != continuumName)
- continue;
-
- // Use 'forceTorque' as a Neumann value for the rod
- const ContinuumLeafBoundaryPatch& interfaceBoundary = this->complex_.coupling(couplingName).continuumInterfaceBoundary_;
-
- //
- VectorType localNeumannValues;
- computeAveragePressure<typename ContinuumGridType::LeafGridView>(forceTorque.find(couplingName)->second,
- interfaceBoundary,
- centerOfTorque.find(couplingName)->second.r,
- localNeumannValues);
-
- BoundaryFunctionalAssembler<P1Basis> boundaryFunctionalAssembler(basis, interfaceBoundary);
- BasisGridFunction<P1Basis,VectorType> neumannValuesFunction(basis,localNeumannValues);
- NeumannBoundaryAssembler<ContinuumGridType, Dune::FieldVector<double,3> > localNeumannAssembler(neumannValuesFunction);
- boundaryFunctionalAssembler.assemble(localNeumannAssembler, rhs, false);
+ ////////////////////////////////////////////////////
+ // Assemble the problem
+ ////////////////////////////////////////////////////
- }
-
- // Set the correct Dirichlet nodes
- /** \brief Don't write this BitSetVector at each iteration */
- Dune::BitSetVector<dim> dirichletNodes(rhs.size(),false);
- for (size_t i=0; i<dirichletNodes.size(); i++)
- dirichletNodes[i] = dirichletBoundary.containsVertex(i);
- dynamic_cast<IterationStep<VectorType>* >(continuum(continuumName).solver_->iterationStep_)->ignoreNodes_
- = &dirichletNodes;
-
- // Initial iterate is 0, all Dirichlet values are 0 (because we solve a correction problem
- VectorType x(dirichletNodes.size());
- x = 0;
-
- assert( (dynamic_cast<LinearIterationStep<MatrixType,VectorType>* >(continuum(continuumName).solver_->iterationStep_)) );
- dynamic_cast<LinearIterationStep<MatrixType,VectorType>* >(continuum(continuumName).solver_->iterationStep_)->setProblem(stiffnessMatrix, x, rhs);
-
- //solver.preprocess();
-
- continuum(continuumName).solver_->solve();
-
- x = continuum(continuumName).solver_->iterationStep_->getSol();
-
- /////////////////////////////////////////////////////////////////////////////////
- // Average the continuum displacement on the coupling boundary
- /////////////////////////////////////////////////////////////////////////////////
- std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> > averageInterface;
-
- for (ForceIterator it = forceTorque.begin(); it!=forceTorque.end(); ++it) {
-
- const std::pair<std::string,std::string>& couplingName = it->first;
-
- if (couplingName.second != continuumName)
- continue;
-
- // Use 'forceTorque' as a Neumann value for the rod
- const ContinuumLeafBoundaryPatch& interfaceBoundary = this->complex_.coupling(couplingName).continuumInterfaceBoundary_;
-
- computeAverageInterface(interfaceBoundary, x, averageInterface[couplingName]);
-
- }
-
- return averageInterface;
+ typedef P1NodalBasis<typename ContinuumGridType::LeafGridView,double> P1Basis;
+ const ContinuumLeafBoundaryPatch& dirichletBoundary = this->complex_.continuum(continuumName).dirichletBoundary_;
+ P1Basis basis(dirichletBoundary.gridView());
+
+ const MatrixType& stiffnessMatrix = *continuum(continuumName).stiffnessMatrix_;
+
+ /////////////////////////////////////////////////////////////////////
+ // Turn the input force and torque into a Neumann boundary field
+ /////////////////////////////////////////////////////////////////////
+
+ // The weak form of the volume and Neumann data
+ /** \brief Not implemented yet! */
+ VectorType rhs(this->complex_.continuumGrid(continuumName)->size(dim));
+ rhs = 0;
+
+ typedef typename std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3>::TangentVector>::const_iterator ForceIterator;
+
+ for (ForceIterator it = forceTorque.begin(); it!=forceTorque.end(); ++it) {
+
+ const std::pair<std::string,std::string>& couplingName = it->first;
+
+ if (couplingName.second != continuumName)
+ continue;
+
+ // Use 'forceTorque' as a Neumann value for the rod
+ const ContinuumLeafBoundaryPatch& interfaceBoundary = this->complex_.coupling(couplingName).continuumInterfaceBoundary_;
+
+ //
+ VectorType localNeumannValues;
+ computeAveragePressure<typename ContinuumGridType::LeafGridView>(forceTorque.find(couplingName)->second,
+ interfaceBoundary,
+ centerOfTorque.find(couplingName)->second.r,
+ localNeumannValues);
+
+ BoundaryFunctionalAssembler<P1Basis> boundaryFunctionalAssembler(basis, interfaceBoundary);
+ BasisGridFunction<P1Basis,VectorType> neumannValuesFunction(basis,localNeumannValues);
+ NeumannBoundaryAssembler<ContinuumGridType, Dune::FieldVector<double,3> > localNeumannAssembler(neumannValuesFunction);
+ boundaryFunctionalAssembler.assemble(localNeumannAssembler, rhs, false);
+
+ }
+
+ // Set the correct Dirichlet nodes
+ /** \brief Don't write this BitSetVector at each iteration */
+ Dune::BitSetVector<dim> dirichletNodes(rhs.size(),false);
+ for (size_t i=0; i<dirichletNodes.size(); i++)
+ dirichletNodes[i] = dirichletBoundary.containsVertex(i);
+ dynamic_cast<IterationStep<VectorType>* >(continuum(continuumName).solver_->iterationStep_)->ignoreNodes_
+ = &dirichletNodes;
+
+ // Initial iterate is 0, all Dirichlet values are 0 (because we solve a correction problem
+ VectorType x(dirichletNodes.size());
+ x = 0;
+
+ assert( (dynamic_cast<LinearIterationStep<MatrixType,VectorType>* >(continuum(continuumName).solver_->iterationStep_)) );
+ dynamic_cast<LinearIterationStep<MatrixType,VectorType>* >(continuum(continuumName).solver_->iterationStep_)->setProblem(stiffnessMatrix, x, rhs);
+
+ //solver.preprocess();
+
+ continuum(continuumName).solver_->solve();
+
+ x = continuum(continuumName).solver_->iterationStep_->getSol();
+
+ /////////////////////////////////////////////////////////////////////////////////
+ // Average the continuum displacement on the coupling boundary
+ /////////////////////////////////////////////////////////////////////////////////
+ std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> > averageInterface;
+
+ for (ForceIterator it = forceTorque.begin(); it!=forceTorque.end(); ++it) {
+
+ const std::pair<std::string,std::string>& couplingName = it->first;
+
+ if (couplingName.second != continuumName)
+ continue;
+
+ // Use 'forceTorque' as a Neumann value for the rod
+ const ContinuumLeafBoundaryPatch& interfaceBoundary = this->complex_.coupling(couplingName).continuumInterfaceBoundary_;
+
+ computeAverageInterface(interfaceBoundary, x, averageInterface[couplingName]);
+
+ }
+
+ return averageInterface;
}
/** \brief One preconditioned Richardson step
-*/
+ */
template <class RodGridType, class ContinuumGridType>
void RodContinuumFixedPointStep<RodGridType,ContinuumGridType>::
iterate(std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3> >& lambda)
{
- ///////////////////////////////////////////////////////////////////
- // Evaluate the Dirichlet-to-Neumann maps for the rods
- ///////////////////////////////////////////////////////////////////
-
- std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3>::TangentVector> rodForceTorque;
-
- for (RodIterator it = rods_.begin(); it != rods_.end(); ++it) {
-
- const std::string& rodName = it->first;
-
- std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3>::TangentVector> forceTorque = rodDirichletToNeumannMap(rodName, lambda);
-
- this->insert(rodForceTorque, forceTorque);
-
- }
+ ///////////////////////////////////////////////////////////////////
+ // Evaluate the Dirichlet-to-Neumann maps for the rods
+ ///////////////////////////////////////////////////////////////////
- std::cout << "resultant rod forces and torques: " << std::endl;
- typedef typename std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3>::TangentVector>::iterator ForceIterator;
- for (ForceIterator it = rodForceTorque.begin(); it != rodForceTorque.end(); ++it)
- std::cout << " [" << it->first.first << ", " << it->first.second << "] -- "
- << it->second << std::endl;
-
- ///////////////////////////////////////////////////////////////
- // Flip orientation of all rod forces, to account for opposing normals.
- ///////////////////////////////////////////////////////////////
-
- for (ForceIterator it = rodForceTorque.begin(); it != rodForceTorque.end(); ++it)
- it->second *= -1;
-
-
- ///////////////////////////////////////////////////////////////
- // Solve the Neumann problems for the continua
- ///////////////////////////////////////////////////////////////
-
- std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3> > averageInterface;
-
- for (ContinuumIterator it = continua_.begin(); it != continua_.end(); ++it) {
-
- const std::string& continuumName = it->first;
-
- std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3> > localAverageInterface
- = continuumNeumannToDirichletMap(continuumName,
- rodForceTorque,
- lambda);
-
- this->insert(averageInterface, localAverageInterface);
-
- }
+ std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3>::TangentVector> rodForceTorque;
- std::cout << "averaged interfaces: " << std::endl;
- for (typename std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3> >::const_iterator it = averageInterface.begin(); it != averageInterface.end(); ++it)
- std::cout << " [" << it->first.first << ", " << it->first.second << "] -- "
- << it->second << std::endl;
+ for (RodIterator it = rods_.begin(); it != rods_.end(); ++it) {
- //////////////////////////////////////////////////////////////
- // Compute new damped interface value
- //////////////////////////////////////////////////////////////
-
- typename std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> >::iterator it = lambda.begin();
- typename std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3> >::const_iterator aIIt = averageInterface.begin();
+ const std::string& rodName = it->first;
- for (; it!=lambda.end(); ++it, ++aIIt) {
+ std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3>::TangentVector> forceTorque = rodDirichletToNeumannMap(rodName, lambda);
- assert(it->first == aIIt->first);
-
- const std::pair<std::string,std::string>& interfaceName = it->first;
-
- const RigidBodyMotion<double,dim>& referenceInterface = this->complex_.coupling(interfaceName).referenceInterface_;
+ this->insert(rodForceTorque, forceTorque);
- for (int j=0; j<dim; j++)
- it->second.r[j] = (1-damping_) * it->second.r[j]
- + damping_ * (referenceInterface.r[j] + averageInterface[interfaceName].r[j]);
+ }
- lambda[interfaceName].q = Rotation<double,3>::interpolate(lambda[interfaceName].q,
- referenceInterface.q.mult(averageInterface[interfaceName].q),
- damping_);
-
- }
+ std::cout << "resultant rod forces and torques: " << std::endl;
+ typedef typename std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3>::TangentVector>::iterator ForceIterator;
+ for (ForceIterator it = rodForceTorque.begin(); it != rodForceTorque.end(); ++it)
+ std::cout << " [" << it->first.first << ", " << it->first.second << "] -- "
+ << it->second << std::endl;
+
+ ///////////////////////////////////////////////////////////////
+ // Flip orientation of all rod forces, to account for opposing normals.
+ ///////////////////////////////////////////////////////////////
+
+ for (ForceIterator it = rodForceTorque.begin(); it != rodForceTorque.end(); ++it)
+ it->second *= -1;
+
+
+ ///////////////////////////////////////////////////////////////
+ // Solve the Neumann problems for the continua
+ ///////////////////////////////////////////////////////////////
+
+ std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3> > averageInterface;
+
+ for (ContinuumIterator it = continua_.begin(); it != continua_.end(); ++it) {
+
+ const std::string& continuumName = it->first;
+
+ std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3> > localAverageInterface
+ = continuumNeumannToDirichletMap(continuumName,
+ rodForceTorque,
+ lambda);
+
+ this->insert(averageInterface, localAverageInterface);
+
+ }
+
+ std::cout << "averaged interfaces: " << std::endl;
+ for (typename std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3> >::const_iterator it = averageInterface.begin(); it != averageInterface.end(); ++it)
+ std::cout << " [" << it->first.first << ", " << it->first.second << "] -- "
+ << it->second << std::endl;
+
+ //////////////////////////////////////////////////////////////
+ // Compute new damped interface value
+ //////////////////////////////////////////////////////////////
+
+ typename std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> >::iterator it = lambda.begin();
+ typename std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3> >::const_iterator aIIt = averageInterface.begin();
+
+ for (; it!=lambda.end(); ++it, ++aIIt) {
+
+ assert(it->first == aIIt->first);
+
+ const std::pair<std::string,std::string>& interfaceName = it->first;
+
+ const RigidBodyMotion<double,dim>& referenceInterface = this->complex_.coupling(interfaceName).referenceInterface_;
+
+ for (int j=0; j<dim; j++)
+ it->second.r[j] = (1-damping_) * it->second.r[j]
+ + damping_ * (referenceInterface.r[j] + averageInterface[interfaceName].r[j]);
+
+ lambda[interfaceName].q = Rotation<double,3>::interpolate(lambda[interfaceName].q,
+ referenceInterface.q.mult(averageInterface[interfaceName].q),
+ damping_);
+
+ }
}
diff --git a/dune/gfe/coupling/rodcontinuumsteklovpoincarestep.hh b/dune/gfe/coupling/rodcontinuumsteklovpoincarestep.hh
index 1b2be7d4..2cddcfb3 100644
--- a/dune/gfe/coupling/rodcontinuumsteklovpoincarestep.hh
+++ b/dune/gfe/coupling/rodcontinuumsteklovpoincarestep.hh
@@ -26,240 +26,240 @@
template <class RodGridType, class ContinuumGridType>
class RodContinuumSteklovPoincareStep
-: public RodContinuumDDStep<RodGridType,ContinuumGridType>
+ : public RodContinuumDDStep<RodGridType,ContinuumGridType>
{
- static const int dim = ContinuumGridType::dimension;
-
- // The type used for rod configurations
- typedef std::vector<RigidBodyMotion<double,dim> > RodConfigurationType;
-
- // The type used for continuum configurations
- typedef Dune::BlockVector<Dune::FieldVector<double,dim> > VectorType;
- typedef Dune::BlockVector<Dune::FieldVector<double,dim> > ContinuumConfigurationType;
-
- typedef Dune::BlockVector<Dune::FieldVector<double,6> > RodCorrectionType;
-
- typedef Dune::BCRSMatrix<Dune::FieldMatrix<double,3,3> > MatrixType;
-
- typedef typename P1NodalBasis<typename ContinuumGridType::LeafGridView,double>::LocalFiniteElement ContinuumLocalFiniteElement;
-
- typedef BoundaryPatch<typename RodGridType::LeafGridView> RodLeafBoundaryPatch;
- typedef BoundaryPatch<typename ContinuumGridType::LeafGridView> ContinuumLeafBoundaryPatch;
-
-public:
-
- /** \brief Constructor for a complex with one rod and one continuum */
- RodContinuumSteklovPoincareStep(const RodContinuumComplex<RodGridType,ContinuumGridType>& complex,
- const std::string& preconditioner,
- const std::array<double,2>& alpha,
- double richardsonDamping,
- RodAssembler<typename RodGridType::LeafGridView,3>* rodAssembler,
- RodLocalStiffness<typename RodGridType::LeafGridView,double>* rodLocalStiffness,
- RiemannianTrustRegionSolver<RodGridType,RigidBodyMotion<double,3> >* rodSolver,
- const MatrixType* stiffnessMatrix3d,
- const Dune::shared_ptr< ::LoopSolver<VectorType> > solver,
- LocalOperatorAssembler<ContinuumGridType,
- ContinuumLocalFiniteElement,
- ContinuumLocalFiniteElement,
- Dune::FieldMatrix<double,dim,dim> >* localAssembler)
- : RodContinuumDDStep<RodGridType,ContinuumGridType>(complex),
- preconditioner_(preconditioner),
- alpha_(alpha),
- richardsonDamping_(richardsonDamping),
- neumannRegularization_(0)
- {
- rods_["rod"].assembler_ = rodAssembler;
- rods_["rod"].localStiffness_ = rodLocalStiffness;
- rods_["rod"].solver_ = rodSolver;
-
- continua_["continuum"].stiffnessMatrix_ = stiffnessMatrix3d;
- continua_["continuum"].solver_ = solver;
- continua_["continuum"].localAssembler_ = localAssembler;
-
- mergeRodDirichletAndCouplingBoundaries();
- mergeContinuumDirichletAndCouplingBoundaries();
- }
+ static const int dim = ContinuumGridType::dimension;
- /** \brief Constructor for a general complex */
- RodContinuumSteklovPoincareStep(const RodContinuumComplex<RodGridType,ContinuumGridType>& complex,
- const std::string& preconditioner,
- const std::array<double,2>& alpha,
- double richardsonDamping,
- const std::map<std::string,RodAssembler<typename RodGridType::LeafGridView,3>*>& rodAssembler,
- const std::map<std::string,RodLocalStiffness<typename RodGridType::LeafGridView,double>*>& rodLocalStiffness,
- const std::map<std::string,RiemannianTrustRegionSolver<RodGridType,RigidBodyMotion<double,3> >*>& rodSolver,
- const std::map<std::string,const MatrixType*>& stiffnessMatrix3d,
- const std::map<std::string, const Dune::shared_ptr< ::LoopSolver<VectorType> > >& solver,
- const std::map<std::string,LocalOperatorAssembler<ContinuumGridType,
- ContinuumLocalFiniteElement,
- ContinuumLocalFiniteElement,
- Dune::FieldMatrix<double,dim,dim> >*>& localAssembler)
- : RodContinuumDDStep<RodGridType,ContinuumGridType>(complex),
- preconditioner_(preconditioner),
- alpha_(alpha),
- richardsonDamping_(richardsonDamping),
- neumannRegularization_(0)
- {
- ///////////////////////////////////////////////////////////////////////////////////
- // Rod-related data
- ///////////////////////////////////////////////////////////////////////////////////
- for (typename std::map<std::string,RodAssembler<typename RodGridType::LeafGridView,3>*>::const_iterator it = rodAssembler.begin();
- it != rodAssembler.end();
- ++it)
- rods_[it->first].assembler_ = it->second;
-
- for (typename std::map<std::string,RodLocalStiffness<typename RodGridType::LeafGridView,double>*>::const_iterator it = rodLocalStiffness.begin();
- it != rodLocalStiffness.end();
- ++it)
- rods_[it->first].localStiffness_ = it->second;
-
- for (typename std::map<std::string,RiemannianTrustRegionSolver<RodGridType,RigidBodyMotion<double,3> >*>::const_iterator it = rodSolver.begin();
- it != rodSolver.end();
- ++it)
- rods_[it->first].solver_ = it->second;
-
- ///////////////////////////////////////////////////////////////////////////////////
- // Continuum-related data
- ///////////////////////////////////////////////////////////////////////////////////
- for (typename std::map<std::string,const MatrixType*>::const_iterator it = stiffnessMatrix3d.begin();
- it != stiffnessMatrix3d.end();
- ++it)
- continua_[it->first].stiffnessMatrix_ = it->second;
-
- for (typename std::map<std::string,const Dune::shared_ptr< ::LoopSolver<VectorType> > >::const_iterator it = solver.begin();
- it != solver.end();
- ++it)
- continua_[it->first].solver_ = it->second;
-
- for (typename std::map<std::string,LocalOperatorAssembler<ContinuumGridType,
- ContinuumLocalFiniteElement,
- ContinuumLocalFiniteElement,
- Dune::FieldMatrix<double,dim,dim> >*>::const_iterator it = localAssembler.begin();
- it != localAssembler.end();
- ++it)
- continua_[it->first].localAssembler_ = it->second;
-
- mergeRodDirichletAndCouplingBoundaries();
- mergeContinuumDirichletAndCouplingBoundaries();
- }
+ // The type used for rod configurations
+ typedef std::vector<RigidBodyMotion<double,dim> > RodConfigurationType;
- void mergeRodDirichletAndCouplingBoundaries();
+ // The type used for continuum configurations
+ typedef Dune::BlockVector<Dune::FieldVector<double,dim> > VectorType;
+ typedef Dune::BlockVector<Dune::FieldVector<double,dim> > ContinuumConfigurationType;
- void mergeContinuumDirichletAndCouplingBoundaries();
+ typedef Dune::BlockVector<Dune::FieldVector<double,6> > RodCorrectionType;
-
- /** \brief Do one Steklov-Poincare step
- * \param[in,out] lambda The old and new iterate
- */
- void iterate(std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3> >& lambda);
+ typedef Dune::BCRSMatrix<Dune::FieldMatrix<double,3,3> > MatrixType;
+
+ typedef typename P1NodalBasis<typename ContinuumGridType::LeafGridView,double>::LocalFiniteElement ContinuumLocalFiniteElement;
+
+ typedef BoundaryPatch<typename RodGridType::LeafGridView> RodLeafBoundaryPatch;
+ typedef BoundaryPatch<typename ContinuumGridType::LeafGridView> ContinuumLeafBoundaryPatch;
+
+public:
+
+ /** \brief Constructor for a complex with one rod and one continuum */
+ RodContinuumSteklovPoincareStep(const RodContinuumComplex<RodGridType,ContinuumGridType>& complex,
+ const std::string& preconditioner,
+ const std::array<double,2>& alpha,
+ double richardsonDamping,
+ RodAssembler<typename RodGridType::LeafGridView,3>* rodAssembler,
+ RodLocalStiffness<typename RodGridType::LeafGridView,double>* rodLocalStiffness,
+ RiemannianTrustRegionSolver<RodGridType,RigidBodyMotion<double,3> >* rodSolver,
+ const MatrixType* stiffnessMatrix3d,
+ const Dune::shared_ptr< ::LoopSolver<VectorType> > solver,
+ LocalOperatorAssembler<ContinuumGridType,
+ ContinuumLocalFiniteElement,
+ ContinuumLocalFiniteElement,
+ Dune::FieldMatrix<double,dim,dim> >* localAssembler)
+ : RodContinuumDDStep<RodGridType,ContinuumGridType>(complex),
+ preconditioner_(preconditioner),
+ alpha_(alpha),
+ richardsonDamping_(richardsonDamping),
+ neumannRegularization_(0)
+ {
+ rods_["rod"].assembler_ = rodAssembler;
+ rods_["rod"].localStiffness_ = rodLocalStiffness;
+ rods_["rod"].solver_ = rodSolver;
+
+ continua_["continuum"].stiffnessMatrix_ = stiffnessMatrix3d;
+ continua_["continuum"].solver_ = solver;
+ continua_["continuum"].localAssembler_ = localAssembler;
+
+ mergeRodDirichletAndCouplingBoundaries();
+ mergeContinuumDirichletAndCouplingBoundaries();
+ }
+
+ /** \brief Constructor for a general complex */
+ RodContinuumSteklovPoincareStep(const RodContinuumComplex<RodGridType,ContinuumGridType>& complex,
+ const std::string& preconditioner,
+ const std::array<double,2>& alpha,
+ double richardsonDamping,
+ const std::map<std::string,RodAssembler<typename RodGridType::LeafGridView,3>*>& rodAssembler,
+ const std::map<std::string,RodLocalStiffness<typename RodGridType::LeafGridView,double>*>& rodLocalStiffness,
+ const std::map<std::string,RiemannianTrustRegionSolver<RodGridType,RigidBodyMotion<double,3> >*>& rodSolver,
+ const std::map<std::string,const MatrixType*>& stiffnessMatrix3d,
+ const std::map<std::string, const Dune::shared_ptr< ::LoopSolver<VectorType> > >& solver,
+ const std::map<std::string,LocalOperatorAssembler<ContinuumGridType,
+ ContinuumLocalFiniteElement,
+ ContinuumLocalFiniteElement,
+ Dune::FieldMatrix<double,dim,dim> >*>& localAssembler)
+ : RodContinuumDDStep<RodGridType,ContinuumGridType>(complex),
+ preconditioner_(preconditioner),
+ alpha_(alpha),
+ richardsonDamping_(richardsonDamping),
+ neumannRegularization_(0)
+ {
+ ///////////////////////////////////////////////////////////////////////////////////
+ // Rod-related data
+ ///////////////////////////////////////////////////////////////////////////////////
+ for (typename std::map<std::string,RodAssembler<typename RodGridType::LeafGridView,3>*>::const_iterator it = rodAssembler.begin();
+ it != rodAssembler.end();
+ ++it)
+ rods_[it->first].assembler_ = it->second;
+
+ for (typename std::map<std::string,RodLocalStiffness<typename RodGridType::LeafGridView,double>*>::const_iterator it = rodLocalStiffness.begin();
+ it != rodLocalStiffness.end();
+ ++it)
+ rods_[it->first].localStiffness_ = it->second;
+
+ for (typename std::map<std::string,RiemannianTrustRegionSolver<RodGridType,RigidBodyMotion<double,3> >*>::const_iterator it = rodSolver.begin();
+ it != rodSolver.end();
+ ++it)
+ rods_[it->first].solver_ = it->second;
+
+ ///////////////////////////////////////////////////////////////////////////////////
+ // Continuum-related data
+ ///////////////////////////////////////////////////////////////////////////////////
+ for (typename std::map<std::string,const MatrixType*>::const_iterator it = stiffnessMatrix3d.begin();
+ it != stiffnessMatrix3d.end();
+ ++it)
+ continua_[it->first].stiffnessMatrix_ = it->second;
+
+ for (typename std::map<std::string,const Dune::shared_ptr< ::LoopSolver<VectorType> > >::const_iterator it = solver.begin();
+ it != solver.end();
+ ++it)
+ continua_[it->first].solver_ = it->second;
+
+ for (typename std::map<std::string,LocalOperatorAssembler<ContinuumGridType,
+ ContinuumLocalFiniteElement,
+ ContinuumLocalFiniteElement,
+ Dune::FieldMatrix<double,dim,dim> >*>::const_iterator it = localAssembler.begin();
+ it != localAssembler.end();
+ ++it)
+ continua_[it->first].localAssembler_ = it->second;
+
+ mergeRodDirichletAndCouplingBoundaries();
+ mergeContinuumDirichletAndCouplingBoundaries();
+ }
+
+ void mergeRodDirichletAndCouplingBoundaries();
+
+ void mergeContinuumDirichletAndCouplingBoundaries();
+
+
+ /** \brief Do one Steklov-Poincare step
+ * \param[in,out] lambda The old and new iterate
+ */
+ void iterate(std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3> >& lambda);
protected:
-
- std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3>::TangentVector>
- rodDirichletToNeumannMap(const std::string& rodName,
+
+ std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3>::TangentVector>
+ rodDirichletToNeumannMap(const std::string& rodName,
+ const std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> >& lambda) const;
+
+ std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3>::TangentVector>
+ continuumDirichletToNeumannMap(const std::string& continuumName,
const std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> >& lambda) const;
-
- std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3>::TangentVector>
- continuumDirichletToNeumannMap(const std::string& continuumName,
- const std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> >& lambda) const;
-
- /** \brief Map a Neumann value to a Dirichlet value
- *
- * \param currentIterate The rod configuration that we are linearizing about
- *
- * \return The Dirichlet value
- */
- std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3>::TangentVector>
- linearizedRodNeumannToDirichletMap(const std::string& rodName,
- const RodConfigurationType& currentIterate,
- const std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3>::TangentVector>& forceTorque,
- const std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> >& centerOfTorque) const;
-
- /** \brief Map a Neumann value to a Dirichlet value
- *
- * \param currentIterate The continuum configuration that we are linearizing about
- *
- * \return The infinitesimal movement of the interface
- */
- std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3>::TangentVector>
- linearizedContinuumNeumannToDirichletMap(const std::string& continuumName,
- const VectorType& currentIterate,
- const std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3>::TangentVector>& forceTorque,
- const std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> >& centerOfTorque) const;
-
- //////////////////////////////////////////////////////////////////
- // Data members related to the coupled problem
- //////////////////////////////////////////////////////////////////
-
- /** \brief Decides which preconditioner is used */
- std::string preconditioner_;
-
- /** \brief Neumann-Neumann damping */
- std::array<double,2> alpha_;
-
- /** \brief Damping factor for the Richardson iteration */
- double richardsonDamping_;
-
+
+ /** \brief Map a Neumann value to a Dirichlet value
+ *
+ * \param currentIterate The rod configuration that we are linearizing about
+ *
+ * \return The Dirichlet value
+ */
+ std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3>::TangentVector>
+ linearizedRodNeumannToDirichletMap(const std::string& rodName,
+ const RodConfigurationType& currentIterate,
+ const std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3>::TangentVector>& forceTorque,
+ const std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> >& centerOfTorque) const;
+
+ /** \brief Map a Neumann value to a Dirichlet value
+ *
+ * \param currentIterate The continuum configuration that we are linearizing about
+ *
+ * \return The infinitesimal movement of the interface
+ */
+ std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3>::TangentVector>
+ linearizedContinuumNeumannToDirichletMap(const std::string& continuumName,
+ const VectorType& currentIterate,
+ const std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3>::TangentVector>& forceTorque,
+ const std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> >& centerOfTorque) const;
+
+ //////////////////////////////////////////////////////////////////
+ // Data members related to the coupled problem
+ //////////////////////////////////////////////////////////////////
+
+ /** \brief Decides which preconditioner is used */
+ std::string preconditioner_;
+
+ /** \brief Neumann-Neumann damping */
+ std::array<double,2> alpha_;
+
+ /** \brief Damping factor for the Richardson iteration */
+ double richardsonDamping_;
+
public:
- double neumannRegularization_;
+ double neumannRegularization_;
protected:
-
- //////////////////////////////////////////////////////////////////
- // Data members related to the rod problems
- //////////////////////////////////////////////////////////////////
-
- struct RodData
- {
- Dune::BitSetVector<6> dirichletAndCouplingNodes_;
-
- RodAssembler<typename RodGridType::LeafGridView,3>* assembler_;
-
- RodLocalStiffness<typename RodGridType::LeafGridView,double>* localStiffness_;
-
- RiemannianTrustRegionSolver<RodGridType,RigidBodyMotion<double,3> >* solver_;
- };
-
- /** \brief Simple const access to rods */
- const RodData& rod(const std::string& name) const
- {
- assert(rods_.find(name) != rods_.end());
- return rods_.find(name)->second;
- }
- std::map<std::string, RodData> rods_;
-
- typedef typename std::map<std::string, RodData>::iterator RodIterator;
-
+ //////////////////////////////////////////////////////////////////
+ // Data members related to the rod problems
+ //////////////////////////////////////////////////////////////////
+
+ struct RodData
+ {
+ Dune::BitSetVector<6> dirichletAndCouplingNodes_;
+
+ RodAssembler<typename RodGridType::LeafGridView,3>* assembler_;
+
+ RodLocalStiffness<typename RodGridType::LeafGridView,double>* localStiffness_;
+
+ RiemannianTrustRegionSolver<RodGridType,RigidBodyMotion<double,3> >* solver_;
+ };
+
+ /** \brief Simple const access to rods */
+ const RodData& rod(const std::string& name) const
+ {
+ assert(rods_.find(name) != rods_.end());
+ return rods_.find(name)->second;
+ }
+
+ std::map<std::string, RodData> rods_;
+
+ typedef typename std::map<std::string, RodData>::iterator RodIterator;
+
protected:
- //////////////////////////////////////////////////////////////////
- // Data members related to the continuum problems
- //////////////////////////////////////////////////////////////////
-
- struct ContinuumData
- {
- const MatrixType* stiffnessMatrix_;
-
- Dune::shared_ptr< ::LoopSolver<VectorType> > solver_;
-
- Dune::BitSetVector<dim> dirichletAndCouplingNodes_;
-
- LocalOperatorAssembler<ContinuumGridType,
- ContinuumLocalFiniteElement,
- ContinuumLocalFiniteElement,
- Dune::FieldMatrix<double,dim,dim> >* localAssembler_;
- };
-
- /** \brief Simple const access to continua */
- const ContinuumData& continuum(const std::string& name) const
- {
- assert(continua_.find(name) != continua_.end());
- return continua_.find(name)->second;
- }
+ //////////////////////////////////////////////////////////////////
+ // Data members related to the continuum problems
+ //////////////////////////////////////////////////////////////////
+
+ struct ContinuumData
+ {
+ const MatrixType* stiffnessMatrix_;
+
+ Dune::shared_ptr< ::LoopSolver<VectorType> > solver_;
+
+ Dune::BitSetVector<dim> dirichletAndCouplingNodes_;
+
+ LocalOperatorAssembler<ContinuumGridType,
+ ContinuumLocalFiniteElement,
+ ContinuumLocalFiniteElement,
+ Dune::FieldMatrix<double,dim,dim> >* localAssembler_;
+ };
+
+ /** \brief Simple const access to continua */
+ const ContinuumData& continuum(const std::string& name) const
+ {
+ assert(continua_.find(name) != continua_.end());
+ return continua_.find(name)->second;
+ }
+
+ std::map<std::string, ContinuumData> continua_;
- std::map<std::string, ContinuumData> continua_;
+ typedef typename std::map<std::string, ContinuumData>::iterator ContinuumIterator;
- typedef typename std::map<std::string, ContinuumData>::iterator ContinuumIterator;
-
};
@@ -267,55 +267,55 @@ template <class RodGridType, class ContinuumGridType>
void RodContinuumSteklovPoincareStep<RodGridType,ContinuumGridType>::
mergeRodDirichletAndCouplingBoundaries()
{
- ////////////////////////////////////////////////////////////////////////////////////
- // For each rod, merge the Dirichlet boundary with all interface boundaries
- //
- // Currently, we can really only solve rod problems with complete Dirichlet
- // boundary. Hence there are more direct ways to construct the
- // dirichletAndCouplingNodes field. Yet like to keep the analogy to the continuum
- // problem. And maybe one day we have a more flexible rod solver, too.
- ////////////////////////////////////////////////////////////////////////////////////
-
- for (RodIterator rIt = rods_.begin(); rIt != rods_.end(); ++rIt) {
-
- // name of the current rod
- const std::string& name = rIt->first;
-
- // short-cut to avoid frequent map look-up
- Dune::BitSetVector<6>& dirichletAndCouplingNodes = rods_[name].dirichletAndCouplingNodes_;
-
- dirichletAndCouplingNodes.resize(this->complex_.rodGrid(name)->size(1));
-
- // first copy the true Dirichlet boundary
- const RodLeafBoundaryPatch& dirichletBoundary = this->complex_.rods_.find(name)->second.dirichletBoundary_;
-
- for (int i=0; i<dirichletAndCouplingNodes.size(); i++)
- dirichletAndCouplingNodes[i] = dirichletBoundary.containsVertex(i);
-
- // get the names of all the continua that we couple with
- std::set<std::string> continuumNames = this->continuaPerRod(name);
-
- for (std::set<std::string>::const_iterator cIt = continuumNames.begin();
- cIt != continuumNames.end();
- ++cIt) {
-
- const RodLeafBoundaryPatch& rodInterfaceBoundary
- = this->complex_.coupling(std::make_pair(name,*cIt)).rodInterfaceBoundary_;
-
- /** \todo Use the BoundaryPatch iterator here, for increased efficiency */
- for (int i=0; i<dirichletAndCouplingNodes.size(); i++) {
- bool v = rodInterfaceBoundary.containsVertex(i);
- for (int j=0; j<6; j++)
- dirichletAndCouplingNodes[i][j] = dirichletAndCouplingNodes[i][j] or v;
- }
-
- }
-
- // We can only handle rod problems with a full Dirichlet boundary
- assert(dirichletAndCouplingNodes.count()==12);
-
+ ////////////////////////////////////////////////////////////////////////////////////
+ // For each rod, merge the Dirichlet boundary with all interface boundaries
+ //
+ // Currently, we can really only solve rod problems with complete Dirichlet
+ // boundary. Hence there are more direct ways to construct the
+ // dirichletAndCouplingNodes field. Yet like to keep the analogy to the continuum
+ // problem. And maybe one day we have a more flexible rod solver, too.
+ ////////////////////////////////////////////////////////////////////////////////////
+
+ for (RodIterator rIt = rods_.begin(); rIt != rods_.end(); ++rIt) {
+
+ // name of the current rod
+ const std::string& name = rIt->first;
+
+ // short-cut to avoid frequent map look-up
+ Dune::BitSetVector<6>& dirichletAndCouplingNodes = rods_[name].dirichletAndCouplingNodes_;
+
+ dirichletAndCouplingNodes.resize(this->complex_.rodGrid(name)->size(1));
+
+ // first copy the true Dirichlet boundary
+ const RodLeafBoundaryPatch& dirichletBoundary = this->complex_.rods_.find(name)->second.dirichletBoundary_;
+
+ for (int i=0; i<dirichletAndCouplingNodes.size(); i++)
+ dirichletAndCouplingNodes[i] = dirichletBoundary.containsVertex(i);
+
+ // get the names of all the continua that we couple with
+ std::set<std::string> continuumNames = this->continuaPerRod(name);
+
+ for (std::set<std::string>::const_iterator cIt = continuumNames.begin();
+ cIt != continuumNames.end();
+ ++cIt) {
+
+ const RodLeafBoundaryPatch& rodInterfaceBoundary
+ = this->complex_.coupling(std::make_pair(name,*cIt)).rodInterfaceBoundary_;
+
+ /** \todo Use the BoundaryPatch iterator here, for increased efficiency */
+ for (int i=0; i<dirichletAndCouplingNodes.size(); i++) {
+ bool v = rodInterfaceBoundary.containsVertex(i);
+ for (int j=0; j<6; j++)
+ dirichletAndCouplingNodes[i][j] = dirichletAndCouplingNodes[i][j] or v;
+ }
+
}
-
+
+ // We can only handle rod problems with a full Dirichlet boundary
+ assert(dirichletAndCouplingNodes.count()==12);
+
+ }
+
}
@@ -323,230 +323,230 @@ template <class RodGridType, class ContinuumGridType>
void RodContinuumSteklovPoincareStep<RodGridType,ContinuumGridType>::
mergeContinuumDirichletAndCouplingBoundaries()
{
- ////////////////////////////////////////////////////////////////////////////////////
- // For each continuum, merge the Dirichlet boundary with all interface boundaries
- ////////////////////////////////////////////////////////////////////////////////////
-
- for (ContinuumIterator cIt = continua_.begin(); cIt != continua_.end(); ++cIt) {
-
- // name of the current continuum
- const std::string& name = cIt->first;
-
- // short-cut to avoid frequent map look-up
- Dune::BitSetVector<dim>& dirichletAndCouplingNodes = continua_[name].dirichletAndCouplingNodes_;
-
- dirichletAndCouplingNodes.resize(this->complex_.continuumGrid(name)->size(dim));
-
- // first copy the true Dirichlet boundary
- const ContinuumLeafBoundaryPatch& dirichletBoundary = this->complex_.continua_.find(name)->second.dirichletBoundary_;
-
- for (int i=0; i<dirichletAndCouplingNodes.size(); i++)
- dirichletAndCouplingNodes[i] = dirichletBoundary.containsVertex(i);
-
- // get the names of all the rods that we couple with
- std::set<std::string> rodNames = this->rodsPerContinuum(name);
-
- for (std::set<std::string>::const_iterator rIt = rodNames.begin();
- rIt != rodNames.end();
- ++rIt) {
-
- const ContinuumLeafBoundaryPatch& continuumInterfaceBoundary
- = this->complex_.coupling(std::make_pair(*rIt,name)).continuumInterfaceBoundary_;
-
- /** \todo Use the BoundaryPatch iterator here, for increased efficiency */
- for (int i=0; i<dirichletAndCouplingNodes.size(); i++) {
- bool v = continuumInterfaceBoundary.containsVertex(i);
- for (int j=0; j<dim; j++)
- dirichletAndCouplingNodes[i][j] = dirichletAndCouplingNodes[i][j] or v;
- }
-
- }
-
+ ////////////////////////////////////////////////////////////////////////////////////
+ // For each continuum, merge the Dirichlet boundary with all interface boundaries
+ ////////////////////////////////////////////////////////////////////////////////////
+
+ for (ContinuumIterator cIt = continua_.begin(); cIt != continua_.end(); ++cIt) {
+
+ // name of the current continuum
+ const std::string& name = cIt->first;
+
+ // short-cut to avoid frequent map look-up
+ Dune::BitSetVector<dim>& dirichletAndCouplingNodes = continua_[name].dirichletAndCouplingNodes_;
+
+ dirichletAndCouplingNodes.resize(this->complex_.continuumGrid(name)->size(dim));
+
+ // first copy the true Dirichlet boundary
+ const ContinuumLeafBoundaryPatch& dirichletBoundary = this->complex_.continua_.find(name)->second.dirichletBoundary_;
+
+ for (int i=0; i<dirichletAndCouplingNodes.size(); i++)
+ dirichletAndCouplingNodes[i] = dirichletBoundary.containsVertex(i);
+
+ // get the names of all the rods that we couple with
+ std::set<std::string> rodNames = this->rodsPerContinuum(name);
+
+ for (std::set<std::string>::const_iterator rIt = rodNames.begin();
+ rIt != rodNames.end();
+ ++rIt) {
+
+ const ContinuumLeafBoundaryPatch& continuumInterfaceBoundary
+ = this->complex_.coupling(std::make_pair(*rIt,name)).continuumInterfaceBoundary_;
+
+ /** \todo Use the BoundaryPatch iterator here, for increased efficiency */
+ for (int i=0; i<dirichletAndCouplingNodes.size(); i++) {
+ bool v = continuumInterfaceBoundary.containsVertex(i);
+ for (int j=0; j<dim; j++)
+ dirichletAndCouplingNodes[i][j] = dirichletAndCouplingNodes[i][j] or v;
+ }
+
}
-
+
+ }
+
}
template <class RodGridType, class ContinuumGridType>
std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3>::TangentVector> RodContinuumSteklovPoincareStep<RodGridType,ContinuumGridType>::
-rodDirichletToNeumannMap(const std::string& rodName,
- const std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> >& lambda) const
+rodDirichletToNeumannMap(const std::string& rodName,
+ const std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> >& lambda) const
{
- // container for the subdomain solution
- RodConfigurationType& rodX = this->rodSubdomainSolutions_[rodName];
- rodX.resize(this->complex_.rodGrid(rodName)->size(1));
-
- ///////////////////////////////////////////////////////////
- // Set the complete set of Dirichlet values
- ///////////////////////////////////////////////////////////
- const RodLeafBoundaryPatch& dirichletBoundary = this->complex_.rod(rodName).dirichletBoundary_;
- const RodConfigurationType& dirichletValues = this->complex_.rod(rodName).dirichletValues_;
-
+ // container for the subdomain solution
+ RodConfigurationType& rodX = this->rodSubdomainSolutions_[rodName];
+ rodX.resize(this->complex_.rodGrid(rodName)->size(1));
+
+ ///////////////////////////////////////////////////////////
+ // Set the complete set of Dirichlet values
+ ///////////////////////////////////////////////////////////
+ const RodLeafBoundaryPatch& dirichletBoundary = this->complex_.rod(rodName).dirichletBoundary_;
+ const RodConfigurationType& dirichletValues = this->complex_.rod(rodName).dirichletValues_;
+
+ for (size_t i=0; i<rodX.size(); i++)
+ if (dirichletBoundary.containsVertex(i))
+ rodX[i] = dirichletValues[i];
+
+ typename std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> >::const_iterator it = lambda.begin();
+ for (; it!=lambda.end(); ++it) {
+
+ const std::pair<std::string,std::string>& couplingName = it->first;
+
+ if (couplingName.first != rodName)
+ continue;
+
+ // Use \lambda as a Dirichlet value for the rod
+ const RodLeafBoundaryPatch& interfaceBoundary = this->complex_.coupling(couplingName).rodInterfaceBoundary_;
+
+ /** \todo Use the BoundaryPatch iterator, which will be a lot faster
+ * once we use EntitySeed for its implementation
+ */
for (size_t i=0; i<rodX.size(); i++)
- if (dirichletBoundary.containsVertex(i))
- rodX[i] = dirichletValues[i];
-
- typename std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> >::const_iterator it = lambda.begin();
- for (; it!=lambda.end(); ++it) {
-
- const std::pair<std::string,std::string>& couplingName = it->first;
-
- if (couplingName.first != rodName)
- continue;
-
- // Use \lambda as a Dirichlet value for the rod
- const RodLeafBoundaryPatch& interfaceBoundary = this->complex_.coupling(couplingName).rodInterfaceBoundary_;
-
- /** \todo Use the BoundaryPatch iterator, which will be a lot faster
- * once we use EntitySeed for its implementation
- */
- for (size_t i=0; i<rodX.size(); i++)
- if (interfaceBoundary.containsVertex(i))
- rodX[i] = it->second;
- }
-
- // Set the correct Dirichlet nodes
- rod(rodName).solver_->setIgnoreNodes(rod(rodName).dirichletAndCouplingNodes_);
-
- ////////////////////////////////////////////////////////////////////////////////
- // Solve the Dirichlet problem
- ////////////////////////////////////////////////////////////////////////////////
-
- // Set initial iterate by interpolating between the Dirichlet values
- RodFactory<typename RodGridType::LeafGridView> rodFactory(this->complex_.rodGrid(rodName)->leafGridView());
- rodFactory.create(rodX);
-
- rod(rodName).solver_->setInitialSolution(rodX);
-
- // Solve the Dirichlet problem
- rod(rodName).solver_->solve();
-
- rodX = rod(rodName).solver_->getSol();
-
- // Extract Neumann values
- std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3>::TangentVector > result;
-
- for (it = lambda.begin(); it!=lambda.end(); ++it) {
-
- const std::pair<std::string,std::string>& couplingName = it->first;
-
- if (couplingName.first != rodName)
- continue;
-
- const RodLeafBoundaryPatch& couplingBoundary = this->complex_.coupling(couplingName).rodInterfaceBoundary_;
-
- result[couplingName] = rod(rodName).assembler_->getResultantForce(couplingBoundary, rodX);
- }
-
- return result;
+ if (interfaceBoundary.containsVertex(i))
+ rodX[i] = it->second;
+ }
+
+ // Set the correct Dirichlet nodes
+ rod(rodName).solver_->setIgnoreNodes(rod(rodName).dirichletAndCouplingNodes_);
+
+ ////////////////////////////////////////////////////////////////////////////////
+ // Solve the Dirichlet problem
+ ////////////////////////////////////////////////////////////////////////////////
+
+ // Set initial iterate by interpolating between the Dirichlet values
+ RodFactory<typename RodGridType::LeafGridView> rodFactory(this->complex_.rodGrid(rodName)->leafGridView());
+ rodFactory.create(rodX);
+
+ rod(rodName).solver_->setInitialSolution(rodX);
+
+ // Solve the Dirichlet problem
+ rod(rodName).solver_->solve();
+
+ rodX = rod(rodName).solver_->getSol();
+
+ // Extract Neumann values
+ std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3>::TangentVector > result;
+
+ for (it = lambda.begin(); it!=lambda.end(); ++it) {
+
+ const std::pair<std::string,std::string>& couplingName = it->first;
+
+ if (couplingName.first != rodName)
+ continue;
+
+ const RodLeafBoundaryPatch& couplingBoundary = this->complex_.coupling(couplingName).rodInterfaceBoundary_;
+
+ result[couplingName] = rod(rodName).assembler_->getResultantForce(couplingBoundary, rodX);
+ }
+
+ return result;
}
template <class RodGridType, class ContinuumGridType>
std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3>::TangentVector> RodContinuumSteklovPoincareStep<RodGridType,ContinuumGridType>::
-continuumDirichletToNeumannMap(const std::string& continuumName,
+continuumDirichletToNeumannMap(const std::string& continuumName,
const std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> >& lambda) const
{
- // Set initial iterate
- VectorType& x3d = this->continuumSubdomainSolutions_[continuumName];
- x3d.resize(this->complex_.continuumGrid(continuumName)->size(dim));
- x3d = 0;
-
- // Copy the true Dirichlet values into it
- const ContinuumLeafBoundaryPatch& dirichletBoundary = this->complex_.continuum(continuumName).dirichletBoundary_;
- const VectorType& dirichletValues = this->complex_.continuum(continuumName).dirichletValues_;
-
- for (size_t i=0; i<x3d.size(); i++)
- if (dirichletBoundary.containsVertex(i))
- x3d[i] = dirichletValues[i];
-
- typename std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> >::const_iterator it = lambda.begin();
- for (; it!=lambda.end(); ++it) {
-
- const std::pair<std::string,std::string>& couplingName = it->first;
-
- if (couplingName.second != continuumName)
- continue;
-
- // Turn \lambda \in TSE(3) into a Dirichlet value for the continuum
- const ContinuumLeafBoundaryPatch& interfaceBoundary = this->complex_.coupling(couplingName).continuumInterfaceBoundary_;
- const RigidBodyMotion<double,dim>& referenceInterface = this->complex_.coupling(couplingName).referenceInterface_;
-
- setRotation(interfaceBoundary, x3d, referenceInterface, it->second);
-
- }
-
- // Set the correct Dirichlet nodes
- dynamic_cast<IterationStep<VectorType>* >(continuum(continuumName).solver_->iterationStep_)->ignoreNodes_
- = &continuum(continuumName).dirichletAndCouplingNodes_;
-
- // Right hand side vector: currently without Neumann and volume terms
- VectorType rhs3d(x3d.size());
- rhs3d = 0;
-
- // Solve the Dirichlet problem
- assert( (dynamic_cast<LinearIterationStep<MatrixType,VectorType>* >(continuum(continuumName).solver_->iterationStep_)) );
- dynamic_cast<LinearIterationStep<MatrixType,VectorType>* >(continuum(continuumName).solver_->iterationStep_)->setProblem(*continuum(continuumName).stiffnessMatrix_, x3d, rhs3d);
-
- continuum(continuumName).solver_->preprocess();
-
- continuum(continuumName).solver_->solve();
-
- x3d = dynamic_cast<IterationStep<VectorType>* >(continuum(continuumName).solver_->iterationStep_)->getSol();
-
- // Integrate over the residual on the coupling boundary to obtain
- // an element of T^*SE.
- Dune::FieldVector<double,3> continuumForce, continuumTorque;
-
- VectorType residual = rhs3d;
- continuum(continuumName).stiffnessMatrix_->mmv(x3d,residual);
-
- //////////////////////////////////////////////////////////////////////////////
- // Extract the residual stresses
- //////////////////////////////////////////////////////////////////////////////
-
- std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3>::TangentVector > result;
-
- for (it = lambda.begin(); it!=lambda.end(); ++it) {
-
- const std::pair<std::string,std::string>& couplingName = it->first;
-
- if (couplingName.second != continuumName)
- continue;
-
- const ContinuumLeafBoundaryPatch& interfaceBoundary = this->complex_.coupling(couplingName).continuumInterfaceBoundary_;
-
- VectorType neumannForces(residual.size());
- neumannForces = 0;
-
- weakToStrongBoundaryStress(interfaceBoundary, residual, neumannForces);
-
- /** \todo Is referenceInterface.r the correct center of rotation? */
- const RigidBodyMotion<double,dim>& referenceInterface = this->complex_.coupling(couplingName).referenceInterface_;
-
- computeTotalForceAndTorque(interfaceBoundary,
- neumannForces,
- referenceInterface.r,
- continuumForce, continuumTorque);
-
- result[couplingName][0] = continuumForce[0];
- result[couplingName][1] = continuumForce[1];
- result[couplingName][2] = continuumForce[2];
- result[couplingName][3] = continuumTorque[0];
- result[couplingName][4] = continuumTorque[1];
- result[couplingName][5] = continuumTorque[2];
-
- }
-
- return result;
+ // Set initial iterate
+ VectorType& x3d = this->continuumSubdomainSolutions_[continuumName];
+ x3d.resize(this->complex_.continuumGrid(continuumName)->size(dim));
+ x3d = 0;
+
+ // Copy the true Dirichlet values into it
+ const ContinuumLeafBoundaryPatch& dirichletBoundary = this->complex_.continuum(continuumName).dirichletBoundary_;
+ const VectorType& dirichletValues = this->complex_.continuum(continuumName).dirichletValues_;
+
+ for (size_t i=0; i<x3d.size(); i++)
+ if (dirichletBoundary.containsVertex(i))
+ x3d[i] = dirichletValues[i];
+
+ typename std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> >::const_iterator it = lambda.begin();
+ for (; it!=lambda.end(); ++it) {
+
+ const std::pair<std::string,std::string>& couplingName = it->first;
+
+ if (couplingName.second != continuumName)
+ continue;
+
+ // Turn \lambda \in TSE(3) into a Dirichlet value for the continuum
+ const ContinuumLeafBoundaryPatch& interfaceBoundary = this->complex_.coupling(couplingName).continuumInterfaceBoundary_;
+ const RigidBodyMotion<double,dim>& referenceInterface = this->complex_.coupling(couplingName).referenceInterface_;
+
+ setRotation(interfaceBoundary, x3d, referenceInterface, it->second);
+
+ }
+
+ // Set the correct Dirichlet nodes
+ dynamic_cast<IterationStep<VectorType>* >(continuum(continuumName).solver_->iterationStep_)->ignoreNodes_
+ = &continuum(continuumName).dirichletAndCouplingNodes_;
+
+ // Right hand side vector: currently without Neumann and volume terms
+ VectorType rhs3d(x3d.size());
+ rhs3d = 0;
+
+ // Solve the Dirichlet problem
+ assert( (dynamic_cast<LinearIterationStep<MatrixType,VectorType>* >(continuum(continuumName).solver_->iterationStep_)) );
+ dynamic_cast<LinearIterationStep<MatrixType,VectorType>* >(continuum(continuumName).solver_->iterationStep_)->setProblem(*continuum(continuumName).stiffnessMatrix_, x3d, rhs3d);
+
+ continuum(continuumName).solver_->preprocess();
+
+ continuum(continuumName).solver_->solve();
+
+ x3d = dynamic_cast<IterationStep<VectorType>* >(continuum(continuumName).solver_->iterationStep_)->getSol();
+
+ // Integrate over the residual on the coupling boundary to obtain
+ // an element of T^*SE.
+ Dune::FieldVector<double,3> continuumForce, continuumTorque;
+
+ VectorType residual = rhs3d;
+ continuum(continuumName).stiffnessMatrix_->mmv(x3d,residual);
+
+ //////////////////////////////////////////////////////////////////////////////
+ // Extract the residual stresses
+ //////////////////////////////////////////////////////////////////////////////
+
+ std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3>::TangentVector > result;
+
+ for (it = lambda.begin(); it!=lambda.end(); ++it) {
+
+ const std::pair<std::string,std::string>& couplingName = it->first;
+
+ if (couplingName.second != continuumName)
+ continue;
+
+ const ContinuumLeafBoundaryPatch& interfaceBoundary = this->complex_.coupling(couplingName).continuumInterfaceBoundary_;
+
+ VectorType neumannForces(residual.size());
+ neumannForces = 0;
+
+ weakToStrongBoundaryStress(interfaceBoundary, residual, neumannForces);
+
+ /** \todo Is referenceInterface.r the correct center of rotation? */
+ const RigidBodyMotion<double,dim>& referenceInterface = this->complex_.coupling(couplingName).referenceInterface_;
+
+ computeTotalForceAndTorque(interfaceBoundary,
+ neumannForces,
+ referenceInterface.r,
+ continuumForce, continuumTorque);
+
+ result[couplingName][0] = continuumForce[0];
+ result[couplingName][1] = continuumForce[1];
+ result[couplingName][2] = continuumForce[2];
+ result[couplingName][3] = continuumTorque[0];
+ result[couplingName][4] = continuumTorque[1];
+ result[couplingName][5] = continuumTorque[2];
+
+ }
+
+ return result;
}
/** \brief Map a Neumann value to a Dirichlet value
-*
-* \param currentIterate The rod configuration that we are linearizing about
-*
-* \return The Dirichlet value
-*/
+ *
+ * \param currentIterate The rod configuration that we are linearizing about
+ *
+ * \return The Dirichlet value
+ */
template <class RodGridType, class ContinuumGridType>
std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3>::TangentVector> RodContinuumSteklovPoincareStep<RodGridType,ContinuumGridType>::
linearizedRodNeumannToDirichletMap(const std::string& rodName,
@@ -554,160 +554,160 @@ linearizedRodNeumannToDirichletMap(const std::string& rodName,
const std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3>::TangentVector>& forceTorque,
const std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> >& centerOfTorque) const
{
- ////////////////////////////////////////////////////
- // Assemble the linearized rod problem
- ////////////////////////////////////////////////////
-
- const RodLeafBoundaryPatch& dirichletBoundary = this->complex_.rod(rodName).dirichletBoundary_;
-
- typedef Dune::BCRSMatrix<Dune::FieldMatrix<double,6,6> > MatrixType;
- GeodesicFEAssembler<P1NodalBasis<typename RodGridType::LeafGridView>, RigidBodyMotion<double,3> > assembler(dirichletBoundary.gridView(),
- rod(rodName).localStiffness_);
- MatrixType stiffnessMatrix;
- assembler.assembleMatrix(currentIterate,
- stiffnessMatrix,
- true // assemble occupation pattern
- );
-
- RodCorrectionType rhs(currentIterate.size());
- rhs = 0;
- assembler.assembleGradient(currentIterate, rhs);
-
- // The right hand side is the _negative_ gradient
- rhs *= -1;
-
- // If we do not have a Dirichlet boundary at all we add a scaled
- // identity matrix. That way the matrix gets elliptic again.
- // Seems to be a common hack in this situation
- for (size_t i=0; i<stiffnessMatrix.N(); i++)
- for (int j=0; j<6; j++)
- stiffnessMatrix[i][i][j][j] += neumannRegularization_;
-
- /////////////////////////////////////////////////////////////////////
- // Turn the input force and torque into a Neumann boundary field
- /////////////////////////////////////////////////////////////////////
-
- typedef typename std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3>::TangentVector>::const_iterator ForceIterator;
-
- for (ForceIterator it = forceTorque.begin(); it!=forceTorque.end(); ++it) {
-
- const std::pair<std::string,std::string>& couplingName = it->first;
-
- if (couplingName.first != rodName)
- continue;
-
- // Transform force from canonical coordinates to coordinates given by lambda
- Dune::FieldVector<double,3> canonicalForce, canonicalTorque;
- for (int i=0; i<3; i++) {
- canonicalForce[i] = it->second[i];
- canonicalTorque[i] = it->second[3+i];
- }
-
- Dune::FieldMatrix<double,3,3> orientationMatrix;
- centerOfTorque.find(couplingName)->second.q.matrix(orientationMatrix);
-
- /** \todo Why don't we have to transform the force as well? */
- Dune::FieldVector<double,3> localForce, localTorque;
- orientationMatrix.mtv(canonicalTorque,localTorque);
- localForce = canonicalForce;
-
- RigidBodyMotion<double,3>::TangentVector localForceTorque;
- for (int i=0; i<3; i++) {
- localForceTorque[i] = localForce[i];
- localForceTorque[3+i] = localTorque[i];
- }
-
- // Use 'forceTorque' as a Neumann value for the rod
- const RodLeafBoundaryPatch& interfaceBoundary = this->complex_.coupling(couplingName).rodInterfaceBoundary_;
-
- const typename RodGridType::LeafGridView::IndexSet& indexSet = interfaceBoundary.gridView().indexSet();
-
- for (typename RodLeafBoundaryPatch::iterator bIt = interfaceBoundary.begin();
- bIt != interfaceBoundary.end();
- ++bIt) {
-
- // vertex index corresponding to the current boundary segment
- size_t idx = indexSet.subIndex(*bIt->inside(), bIt->indexInInside(), 1);
-
- rhs[idx] += localForceTorque;
-
- }
+ ////////////////////////////////////////////////////
+ // Assemble the linearized rod problem
+ ////////////////////////////////////////////////////
+
+ const RodLeafBoundaryPatch& dirichletBoundary = this->complex_.rod(rodName).dirichletBoundary_;
+
+ typedef Dune::BCRSMatrix<Dune::FieldMatrix<double,6,6> > MatrixType;
+ GeodesicFEAssembler<P1NodalBasis<typename RodGridType::LeafGridView>, RigidBodyMotion<double,3> > assembler(dirichletBoundary.gridView(),
+ rod(rodName).localStiffness_);
+ MatrixType stiffnessMatrix;
+ assembler.assembleMatrix(currentIterate,
+ stiffnessMatrix,
+ true // assemble occupation pattern
+ );
+
+ RodCorrectionType rhs(currentIterate.size());
+ rhs = 0;
+ assembler.assembleGradient(currentIterate, rhs);
+
+ // The right hand side is the _negative_ gradient
+ rhs *= -1;
+
+ // If we do not have a Dirichlet boundary at all we add a scaled
+ // identity matrix. That way the matrix gets elliptic again.
+ // Seems to be a common hack in this situation
+ for (size_t i=0; i<stiffnessMatrix.N(); i++)
+ for (int j=0; j<6; j++)
+ stiffnessMatrix[i][i][j][j] += neumannRegularization_;
+
+ /////////////////////////////////////////////////////////////////////
+ // Turn the input force and torque into a Neumann boundary field
+ /////////////////////////////////////////////////////////////////////
+ typedef typename std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3>::TangentVector>::const_iterator ForceIterator;
+
+ for (ForceIterator it = forceTorque.begin(); it!=forceTorque.end(); ++it) {
+
+ const std::pair<std::string,std::string>& couplingName = it->first;
+
+ if (couplingName.first != rodName)
+ continue;
+
+ // Transform force from canonical coordinates to coordinates given by lambda
+ Dune::FieldVector<double,3> canonicalForce, canonicalTorque;
+ for (int i=0; i<3; i++) {
+ canonicalForce[i] = it->second[i];
+ canonicalTorque[i] = it->second[3+i];
+ }
+
+ Dune::FieldMatrix<double,3,3> orientationMatrix;
+ centerOfTorque.find(couplingName)->second.q.matrix(orientationMatrix);
+
+ /** \todo Why don't we have to transform the force as well? */
+ Dune::FieldVector<double,3> localForce, localTorque;
+ orientationMatrix.mtv(canonicalTorque,localTorque);
+ localForce = canonicalForce;
+
+ RigidBodyMotion<double,3>::TangentVector localForceTorque;
+ for (int i=0; i<3; i++) {
+ localForceTorque[i] = localForce[i];
+ localForceTorque[3+i] = localTorque[i];
}
-
- ///////////////////////////////////////////////////////////
- // Modify matrix and rhs to contain one Dirichlet node
- ///////////////////////////////////////////////////////////
-
- for (size_t i=0; i<rhs.size(); i++)
- if (dirichletBoundary.containsVertex(i)) {
- rhs[i] = 0;
- stiffnessMatrix[i] = 0;
- stiffnessMatrix[i][i] = Dune::ScaledIdentityMatrix<double,6>(1);
- }
-
- //////////////////////////////////////////////////
- // Solve the Neumann problem
- //////////////////////////////////////////////////
-
- RodCorrectionType x(rhs.size());
- x = 0; // initial iterate
-
- // Technicality: turn the matrix into a linear operator
- Dune::MatrixAdapter<MatrixType,RodCorrectionType,RodCorrectionType> op(stiffnessMatrix);
-
- // A preconditioner
- Dune::SeqILU0<MatrixType,RodCorrectionType,RodCorrectionType> ilu0(stiffnessMatrix,1.0);
-
- // A preconditioned conjugate-gradient solver
- Dune::CGSolver<RodCorrectionType> cg(op,ilu0,1E-4,100,0);
-
- // Object storing some statistics about the solving process
- Dune::InverseOperatorResult statistics;
-
- // Solve!
+
+ // Use 'forceTorque' as a Neumann value for the rod
+ const RodLeafBoundaryPatch& interfaceBoundary = this->complex_.coupling(couplingName).rodInterfaceBoundary_;
+
+ const typename RodGridType::LeafGridView::IndexSet& indexSet = interfaceBoundary.gridView().indexSet();
+
+ for (typename RodLeafBoundaryPatch::iterator bIt = interfaceBoundary.begin();
+ bIt != interfaceBoundary.end();
+ ++bIt) {
+
+ // vertex index corresponding to the current boundary segment
+ size_t idx = indexSet.subIndex(*bIt->inside(), bIt->indexInInside(), 1);
+
+ rhs[idx] += localForceTorque;
+
+ }
+
+ }
+
+ ///////////////////////////////////////////////////////////
+ // Modify matrix and rhs to contain one Dirichlet node
+ ///////////////////////////////////////////////////////////
+
+ for (size_t i=0; i<rhs.size(); i++)
+ if (dirichletBoundary.containsVertex(i)) {
+ rhs[i] = 0;
+ stiffnessMatrix[i] = 0;
+ stiffnessMatrix[i][i] = Dune::ScaledIdentityMatrix<double,6>(1);
+ }
+
+ //////////////////////////////////////////////////
+ // Solve the Neumann problem
+ //////////////////////////////////////////////////
+
+ RodCorrectionType x(rhs.size());
+ x = 0; // initial iterate
+
+ // Technicality: turn the matrix into a linear operator
+ Dune::MatrixAdapter<MatrixType,RodCorrectionType,RodCorrectionType> op(stiffnessMatrix);
+
+ // A preconditioner
+ Dune::SeqILU0<MatrixType,RodCorrectionType,RodCorrectionType> ilu0(stiffnessMatrix,1.0);
+
+ // A preconditioned conjugate-gradient solver
+ Dune::CGSolver<RodCorrectionType> cg(op,ilu0,1E-4,100,0);
+
+ // Object storing some statistics about the solving process
+ Dune::InverseOperatorResult statistics;
+
+ // Solve!
#ifndef NDEBUG
- RodCorrectionType residual = rhs;
+ RodCorrectionType residual = rhs;
#endif
- cg.apply(x, rhs, statistics);
-
+ cg.apply(x, rhs, statistics);
+
#ifndef NDEBUG
- // paranoia
- stiffnessMatrix.mmv(x,residual);
- assert(residual.infinity_norm() < 1e-4);
+ // paranoia
+ stiffnessMatrix.mmv(x,residual);
+ assert(residual.infinity_norm() < 1e-4);
#endif
-
- ///////////////////////////////////////////////////////////////////////////////////////
- // Extract the solution at the interface boundaries
- ///////////////////////////////////////////////////////////////////////////////////////
- std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3>::TangentVector> interfaceCorrection;
-
- for (ForceIterator it = forceTorque.begin(); it!=forceTorque.end(); ++it) {
-
- const std::pair<std::string,std::string>& couplingName = it->first;
-
- if (couplingName.first != rodName)
- continue;
-
- const RodLeafBoundaryPatch& interfaceBoundary = this->complex_.coupling(couplingName).rodInterfaceBoundary_;
-
- const typename RodGridType::LeafGridView::IndexSet& indexSet = interfaceBoundary.gridView().indexSet();
-
- for (typename RodLeafBoundaryPatch::iterator bIt = interfaceBoundary.begin();
- bIt != interfaceBoundary.end();
- ++bIt) {
-
- // vertex index corresponding to the current boundary segment
- size_t idx = indexSet.subIndex(*bIt->inside(), bIt->indexInInside(), 1);
-
- /** \todo We assume here that a coupling boundary consists of a single point only (not two)
- */
- interfaceCorrection[couplingName] = x[idx];
- }
+ ///////////////////////////////////////////////////////////////////////////////////////
+ // Extract the solution at the interface boundaries
+ ///////////////////////////////////////////////////////////////////////////////////////
+ std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3>::TangentVector> interfaceCorrection;
+
+ for (ForceIterator it = forceTorque.begin(); it!=forceTorque.end(); ++it) {
+
+ const std::pair<std::string,std::string>& couplingName = it->first;
+
+ if (couplingName.first != rodName)
+ continue;
+
+ const RodLeafBoundaryPatch& interfaceBoundary = this->complex_.coupling(couplingName).rodInterfaceBoundary_;
+
+ const typename RodGridType::LeafGridView::IndexSet& indexSet = interfaceBoundary.gridView().indexSet();
+
+ for (typename RodLeafBoundaryPatch::iterator bIt = interfaceBoundary.begin();
+ bIt != interfaceBoundary.end();
+ ++bIt) {
+
+ // vertex index corresponding to the current boundary segment
+ size_t idx = indexSet.subIndex(*bIt->inside(), bIt->indexInInside(), 1);
+
+ /** \todo We assume here that a coupling boundary consists of a single point only (not two)
+ */
+ interfaceCorrection[couplingName] = x[idx];
}
-
- return interfaceCorrection;
+
+ }
+
+ return interfaceCorrection;
}
@@ -718,293 +718,293 @@ linearizedContinuumNeumannToDirichletMap(const std::string& continuumName,
const std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3>::TangentVector>& forceTorque,
const std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> >& centerOfTorque) const
{
- ////////////////////////////////////////////////////
- // Assemble the linearized problem
- ////////////////////////////////////////////////////
-
- /** \todo We are actually assembling standard linear elasticity,
- * i.e. the linearization at zero
- */
- typedef P1NodalBasis<typename ContinuumGridType::LeafGridView,double> P1Basis;
- const ContinuumLeafBoundaryPatch& dirichletBoundary = this->complex_.continuum(continuumName).dirichletBoundary_;
- P1Basis basis(dirichletBoundary.gridView());
- OperatorAssembler<P1Basis,P1Basis> assembler(basis, basis);
-
- MatrixType stiffnessMatrix;
- assembler.assemble(*continuum(continuumName).localAssembler_, stiffnessMatrix);
-
-
- /////////////////////////////////////////////////////////////////////
- // Turn the input force and torque into a Neumann boundary field
- /////////////////////////////////////////////////////////////////////
-
- // The weak form of the volume and Neumann data
- /** \brief Not implemented yet! */
- VectorType rhs(this->complex_.continuumGrid(continuumName)->size(dim));
- rhs = 0;
-
- typedef typename std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3>::TangentVector>::const_iterator ForceIterator;
-
- for (ForceIterator it = forceTorque.begin(); it!=forceTorque.end(); ++it) {
-
- const std::pair<std::string,std::string>& couplingName = it->first;
-
- if (couplingName.second != continuumName)
- continue;
-
- // Use 'forceTorque' as a Neumann value for the rod
- const ContinuumLeafBoundaryPatch& interfaceBoundary = this->complex_.coupling(couplingName).continuumInterfaceBoundary_;
-
- //
- VectorType localNeumannValues;
- computeAveragePressure<typename ContinuumGridType::LeafGridView>(forceTorque.find(couplingName)->second,
- interfaceBoundary,
- centerOfTorque.find(couplingName)->second.r,
- localNeumannValues);
-
- BoundaryFunctionalAssembler<P1Basis> boundaryFunctionalAssembler(basis, interfaceBoundary);
- BasisGridFunction<P1Basis,VectorType> neumannValuesFunction(basis,localNeumannValues);
- NeumannBoundaryAssembler<ContinuumGridType, Dune::FieldVector<double,3> > localNeumannAssembler(neumannValuesFunction);
- boundaryFunctionalAssembler.assemble(localNeumannAssembler, rhs, false);
+ ////////////////////////////////////////////////////
+ // Assemble the linearized problem
+ ////////////////////////////////////////////////////
- }
-
- // Set the correct Dirichlet nodes
- /** \brief Don't write this BitSetVector at each iteration */
- Dune::BitSetVector<dim> dirichletNodes(rhs.size(),false);
- for (size_t i=0; i<dirichletNodes.size(); i++)
- dirichletNodes[i] = dirichletBoundary.containsVertex(i);
- dynamic_cast<IterationStep<VectorType>* >(continuum(continuumName).solver_->iterationStep_)->ignoreNodes_
- = &dirichletNodes;
-
- // Initial iterate is 0, all Dirichlet values are 0 (because we solve a correction problem
- VectorType x(dirichletNodes.size());
- x = 0;
-
- assert( (dynamic_cast<LinearIterationStep<MatrixType,VectorType>* >(continuum(continuumName).solver_->iterationStep_)) );
- dynamic_cast<LinearIterationStep<MatrixType,VectorType>* >(continuum(continuumName).solver_->iterationStep_)->setProblem(stiffnessMatrix, x, rhs);
-
- //solver.preprocess();
-
- continuum(continuumName).solver_->solve();
-
- x = continuum(continuumName).solver_->iterationStep_->getSol();
-
- /////////////////////////////////////////////////////////////////////////////////
- // Average the continuum displacement on the coupling boundary
- /////////////////////////////////////////////////////////////////////////////////
- std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3>::TangentVector> interfaceCorrection;
-
- for (ForceIterator it = forceTorque.begin(); it!=forceTorque.end(); ++it) {
-
- const std::pair<std::string,std::string>& couplingName = it->first;
-
- if (couplingName.second != continuumName)
- continue;
-
- // Use 'forceTorque' as a Neumann value for the rod
- const ContinuumLeafBoundaryPatch& interfaceBoundary = this->complex_.coupling(couplingName).continuumInterfaceBoundary_;
-
- RigidBodyMotion<double,3> averageInterface;
- computeAverageInterface(interfaceBoundary, x, averageInterface);
-
- // Compute the linearization
- /** \todo We could loop directly over interfaceCorrection (and save the name lookup)
- * if we could be sure that interfaceCorrection contains all possible entries already
- */
- interfaceCorrection[couplingName][0] = averageInterface.r[0];
- interfaceCorrection[couplingName][1] = averageInterface.r[1];
- interfaceCorrection[couplingName][2] = averageInterface.r[2];
-
- Dune::FieldVector<double,3> infinitesimalRotation = Rotation<double,3>::expInv(averageInterface.q);
- interfaceCorrection[couplingName][3] = infinitesimalRotation[0];
- interfaceCorrection[couplingName][4] = infinitesimalRotation[1];
- interfaceCorrection[couplingName][5] = infinitesimalRotation[2];
-
- }
-
- return interfaceCorrection;
+ /** \todo We are actually assembling standard linear elasticity,
+ * i.e. the linearization at zero
+ */
+ typedef P1NodalBasis<typename ContinuumGridType::LeafGridView,double> P1Basis;
+ const ContinuumLeafBoundaryPatch& dirichletBoundary = this->complex_.continuum(continuumName).dirichletBoundary_;
+ P1Basis basis(dirichletBoundary.gridView());
+ OperatorAssembler<P1Basis,P1Basis> assembler(basis, basis);
+
+ MatrixType stiffnessMatrix;
+ assembler.assemble(*continuum(continuumName).localAssembler_, stiffnessMatrix);
+
+
+ /////////////////////////////////////////////////////////////////////
+ // Turn the input force and torque into a Neumann boundary field
+ /////////////////////////////////////////////////////////////////////
+
+ // The weak form of the volume and Neumann data
+ /** \brief Not implemented yet! */
+ VectorType rhs(this->complex_.continuumGrid(continuumName)->size(dim));
+ rhs = 0;
+
+ typedef typename std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3>::TangentVector>::const_iterator ForceIterator;
+
+ for (ForceIterator it = forceTorque.begin(); it!=forceTorque.end(); ++it) {
+
+ const std::pair<std::string,std::string>& couplingName = it->first;
+
+ if (couplingName.second != continuumName)
+ continue;
+
+ // Use 'forceTorque' as a Neumann value for the rod
+ const ContinuumLeafBoundaryPatch& interfaceBoundary = this->complex_.coupling(couplingName).continuumInterfaceBoundary_;
+
+ //
+ VectorType localNeumannValues;
+ computeAveragePressure<typename ContinuumGridType::LeafGridView>(forceTorque.find(couplingName)->second,
+ interfaceBoundary,
+ centerOfTorque.find(couplingName)->second.r,
+ localNeumannValues);
+
+ BoundaryFunctionalAssembler<P1Basis> boundaryFunctionalAssembler(basis, interfaceBoundary);
+ BasisGridFunction<P1Basis,VectorType> neumannValuesFunction(basis,localNeumannValues);
+ NeumannBoundaryAssembler<ContinuumGridType, Dune::FieldVector<double,3> > localNeumannAssembler(neumannValuesFunction);
+ boundaryFunctionalAssembler.assemble(localNeumannAssembler, rhs, false);
+
+ }
+
+ // Set the correct Dirichlet nodes
+ /** \brief Don't write this BitSetVector at each iteration */
+ Dune::BitSetVector<dim> dirichletNodes(rhs.size(),false);
+ for (size_t i=0; i<dirichletNodes.size(); i++)
+ dirichletNodes[i] = dirichletBoundary.containsVertex(i);
+ dynamic_cast<IterationStep<VectorType>* >(continuum(continuumName).solver_->iterationStep_)->ignoreNodes_
+ = &dirichletNodes;
+
+ // Initial iterate is 0, all Dirichlet values are 0 (because we solve a correction problem
+ VectorType x(dirichletNodes.size());
+ x = 0;
+
+ assert( (dynamic_cast<LinearIterationStep<MatrixType,VectorType>* >(continuum(continuumName).solver_->iterationStep_)) );
+ dynamic_cast<LinearIterationStep<MatrixType,VectorType>* >(continuum(continuumName).solver_->iterationStep_)->setProblem(stiffnessMatrix, x, rhs);
+
+ //solver.preprocess();
+
+ continuum(continuumName).solver_->solve();
+
+ x = continuum(continuumName).solver_->iterationStep_->getSol();
+
+ /////////////////////////////////////////////////////////////////////////////////
+ // Average the continuum displacement on the coupling boundary
+ /////////////////////////////////////////////////////////////////////////////////
+ std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3>::TangentVector> interfaceCorrection;
+
+ for (ForceIterator it = forceTorque.begin(); it!=forceTorque.end(); ++it) {
+
+ const std::pair<std::string,std::string>& couplingName = it->first;
+
+ if (couplingName.second != continuumName)
+ continue;
+
+ // Use 'forceTorque' as a Neumann value for the rod
+ const ContinuumLeafBoundaryPatch& interfaceBoundary = this->complex_.coupling(couplingName).continuumInterfaceBoundary_;
+
+ RigidBodyMotion<double,3> averageInterface;
+ computeAverageInterface(interfaceBoundary, x, averageInterface);
+
+ // Compute the linearization
+ /** \todo We could loop directly over interfaceCorrection (and save the name lookup)
+ * if we could be sure that interfaceCorrection contains all possible entries already
+ */
+ interfaceCorrection[couplingName][0] = averageInterface.r[0];
+ interfaceCorrection[couplingName][1] = averageInterface.r[1];
+ interfaceCorrection[couplingName][2] = averageInterface.r[2];
+
+ Dune::FieldVector<double,3> infinitesimalRotation = Rotation<double,3>::expInv(averageInterface.q);
+ interfaceCorrection[couplingName][3] = infinitesimalRotation[0];
+ interfaceCorrection[couplingName][4] = infinitesimalRotation[1];
+ interfaceCorrection[couplingName][5] = infinitesimalRotation[2];
+
+ }
+
+ return interfaceCorrection;
}
/** \brief One preconditioned Richardson step
-*/
+ */
template <class RodGridType, class ContinuumGridType>
void RodContinuumSteklovPoincareStep<RodGridType,ContinuumGridType>::
iterate(std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3> >& lambda)
{
- ///////////////////////////////////////////////////////////////////
- // Evaluate the Dirichlet-to-Neumann maps for the rods
- ///////////////////////////////////////////////////////////////////
+ ///////////////////////////////////////////////////////////////////
+ // Evaluate the Dirichlet-to-Neumann maps for the rods
+ ///////////////////////////////////////////////////////////////////
- std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3>::TangentVector> rodForceTorque;
-
- for (RodIterator it = rods_.begin(); it != rods_.end(); ++it) {
-
- const std::string& rodName = it->first;
-
- std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3>::TangentVector> forceTorque = rodDirichletToNeumannMap(rodName, lambda);
+ std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3>::TangentVector> rodForceTorque;
- this->insert(rodForceTorque, forceTorque);
-
- }
+ for (RodIterator it = rods_.begin(); it != rods_.end(); ++it) {
+
+ const std::string& rodName = it->first;
+
+ std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3>::TangentVector> forceTorque = rodDirichletToNeumannMap(rodName, lambda);
+
+ this->insert(rodForceTorque, forceTorque);
+
+ }
+
+ std::cout << "resultant rod forces and torques: " << std::endl;
+ typedef typename std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3>::TangentVector>::iterator ForceIterator;
+ for (ForceIterator it = rodForceTorque.begin(); it != rodForceTorque.end(); ++it)
+ std::cout << " [" << it->first.first << ", " << it->first.second << "] -- "
+ << it->second << std::endl;
+
+ ///////////////////////////////////////////////////////////////////
+ // Evaluate the Dirichlet-to-Neumann map for the continuum
+ ///////////////////////////////////////////////////////////////////
- std::cout << "resultant rod forces and torques: " << std::endl;
- typedef typename std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3>::TangentVector>::iterator ForceIterator;
- for (ForceIterator it = rodForceTorque.begin(); it != rodForceTorque.end(); ++it)
- std::cout << " [" << it->first.first << ", " << it->first.second << "] -- "
- << it->second << std::endl;
+ std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3>::TangentVector> continuumForceTorque;
- ///////////////////////////////////////////////////////////////////
- // Evaluate the Dirichlet-to-Neumann map for the continuum
- ///////////////////////////////////////////////////////////////////
-
- std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3>::TangentVector> continuumForceTorque;
+ for (ContinuumIterator it = continua_.begin(); it != continua_.end(); ++it) {
+
+ const std::string& continuumName = it->first;
+
+ std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3>::TangentVector> forceTorque
+ = continuumDirichletToNeumannMap(continuumName, lambda);
+
+ this->insert(continuumForceTorque, forceTorque);
+
+ }
+
+ std::cout << "resultant continuum force and torque: " << std::endl;
+ for (ForceIterator it = continuumForceTorque.begin(); it != continuumForceTorque.end(); ++it)
+ std::cout << " [" << it->first.first << ", " << it->first.second << "] -- "
+ << it->second << std::endl;
+
+ ///////////////////////////////////////////////////////////////
+ // Compute the overall Steklov-Poincare residual
+ ///////////////////////////////////////////////////////////////
+
+ // Flip orientation of all rod forces, to account for opposing normals.
+ for (ForceIterator it = rodForceTorque.begin(); it != rodForceTorque.end(); ++it)
+ it->second *= -1;
+
+ std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3>::TangentVector> residualForceTorque = rodForceTorque;
+
+ for (ForceIterator it = residualForceTorque.begin(), it2 = continuumForceTorque.begin();
+ it != residualForceTorque.end();
+ ++it, ++it2) {
+ assert(it->first == it2->first);
+ it->second += it2->second;
+ }
+
+ ///////////////////////////////////////////////////////////////
+ // Apply the preconditioner
+ ///////////////////////////////////////////////////////////////
+
+ std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3>::TangentVector> continuumCorrection;
+ std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3>::TangentVector> rodCorrection;
+
+ if (preconditioner_=="DirichletNeumann" or preconditioner_=="NeumannNeumann") {
+
+ ////////////////////////////////////////////////////////////////////
+ // Preconditioner is the linearized Neumann-to-Dirichlet map
+ // of the continuum.
+ ////////////////////////////////////////////////////////////////////
for (ContinuumIterator it = continua_.begin(); it != continua_.end(); ++it) {
-
- const std::string& continuumName = it->first;
-
- std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3>::TangentVector> forceTorque
- = continuumDirichletToNeumannMap(continuumName, lambda);
-
- this->insert(continuumForceTorque, forceTorque);
-
+
+ const std::string& continuumName = it->first;
+
+ std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3>::TangentVector> continuumInterfaceCorrection
+ = linearizedContinuumNeumannToDirichletMap(continuumName,
+ this->continuumSubdomainSolutions_[continuumName],
+ residualForceTorque,
+ lambda);
+
+ this->insert(continuumCorrection, continuumInterfaceCorrection);
+
}
- std::cout << "resultant continuum force and torque: " << std::endl;
- for (ForceIterator it = continuumForceTorque.begin(); it != continuumForceTorque.end(); ++it)
- std::cout << " [" << it->first.first << ", " << it->first.second << "] -- "
- << it->second << std::endl;
-
- ///////////////////////////////////////////////////////////////
- // Compute the overall Steklov-Poincare residual
- ///////////////////////////////////////////////////////////////
-
- // Flip orientation of all rod forces, to account for opposing normals.
- for (ForceIterator it = rodForceTorque.begin(); it != rodForceTorque.end(); ++it)
- it->second *= -1;
-
- std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3>::TangentVector> residualForceTorque = rodForceTorque;
-
- for (ForceIterator it = residualForceTorque.begin(), it2 = continuumForceTorque.begin();
- it != residualForceTorque.end();
- ++it, ++it2) {
- assert(it->first == it2->first);
- it->second += it2->second;
+ std::cout << "resultant continuum interface corrections: " << std::endl;
+ for (ForceIterator it = continuumCorrection.begin(); it != continuumCorrection.end(); ++it)
+ std::cout << " [" << it->first.first << ", " << it->first.second << "] -- "
+ << it->second << std::endl;
+
+
+ }
+
+ if (preconditioner_=="NeumannDirichlet" or preconditioner_=="NeumannNeumann") {
+
+ ////////////////////////////////////////////////////////////////////
+ // Preconditioner is the linearized Neumann-to-Dirichlet map
+ // of the rod.
+ ////////////////////////////////////////////////////////////////////
+
+ for (RodIterator it = rods_.begin(); it != rods_.end(); ++it) {
+
+ const std::string& rodName = it->first;
+
+ std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3>::TangentVector> rodInterfaceCorrection
+ = linearizedRodNeumannToDirichletMap(rodName,
+ this->rodSubdomainSolutions_[rodName],
+ residualForceTorque,
+ lambda);
+
+ this->insert(rodCorrection, rodInterfaceCorrection);
+
}
-
- ///////////////////////////////////////////////////////////////
- // Apply the preconditioner
- ///////////////////////////////////////////////////////////////
-
- std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3>::TangentVector> continuumCorrection;
- std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3>::TangentVector> rodCorrection;
-
- if (preconditioner_=="DirichletNeumann" or preconditioner_=="NeumannNeumann") {
-
- ////////////////////////////////////////////////////////////////////
- // Preconditioner is the linearized Neumann-to-Dirichlet map
- // of the continuum.
- ////////////////////////////////////////////////////////////////////
-
- for (ContinuumIterator it = continua_.begin(); it != continua_.end(); ++it) {
-
- const std::string& continuumName = it->first;
-
- std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3>::TangentVector> continuumInterfaceCorrection
- = linearizedContinuumNeumannToDirichletMap(continuumName,
- this->continuumSubdomainSolutions_[continuumName],
- residualForceTorque,
- lambda);
-
- this->insert(continuumCorrection, continuumInterfaceCorrection);
-
- }
-
- std::cout << "resultant continuum interface corrections: " << std::endl;
- for (ForceIterator it = continuumCorrection.begin(); it != continuumCorrection.end(); ++it)
- std::cout << " [" << it->first.first << ", " << it->first.second << "] -- "
- << it->second << std::endl;
-
-
- }
-
- if (preconditioner_=="NeumannDirichlet" or preconditioner_=="NeumannNeumann") {
-
- ////////////////////////////////////////////////////////////////////
- // Preconditioner is the linearized Neumann-to-Dirichlet map
- // of the rod.
- ////////////////////////////////////////////////////////////////////
-
- for (RodIterator it = rods_.begin(); it != rods_.end(); ++it) {
-
- const std::string& rodName = it->first;
-
- std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3>::TangentVector> rodInterfaceCorrection
- = linearizedRodNeumannToDirichletMap(rodName,
- this->rodSubdomainSolutions_[rodName],
- residualForceTorque,
- lambda);
-
- this->insert(rodCorrection, rodInterfaceCorrection);
-
- }
-
- std::cout << "resultant rod interface corrections: " << std::endl;
- for (ForceIterator it = rodCorrection.begin(); it != rodCorrection.end(); ++it)
- std::cout << " [" << it->first.first << ", " << it->first.second << "] -- "
- << it->second << std::endl;
-
- }
-
- std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3>::TangentVector> interfaceCorrection;
-
- if (preconditioner_=="DirichletNeumann") {
-
- interfaceCorrection = continuumCorrection;
-
- } else if (preconditioner_=="NeumannDirichlet") {
-
- interfaceCorrection = rodCorrection;
-
- } else if (preconditioner_=="NeumannNeumann") {
-
- std::cout << "resultant interface corrections: " << std::endl;
- for (ForceIterator it = rodCorrection.begin(); it != rodCorrection.end(); ++it) {
-
- const std::pair<std::string,std::string> interfaceName = it->first;
-
- std::cout << " [" << interfaceName.first << ", " << interfaceName.second << "]"
- << " -- " << it->second
- << " -- " << continuumCorrection[interfaceName] << std::endl;
-
- // Compute weighted combination of both
- RigidBodyMotion<double,3>::TangentVector& correction = interfaceCorrection[interfaceName];
- for (int j=0; j<6; j++)
- correction[j] = (alpha_[0] * continuumCorrection[interfaceName][j] + alpha_[1] * rodCorrection[interfaceName][j])
- / (alpha_[0] + alpha_[1]);
-
- }
-
- } else if (preconditioner_=="RobinRobin") {
-
- DUNE_THROW(Dune::NotImplemented, "Robin-Robin preconditioner not implemented yet");
-
- } else
- DUNE_THROW(Dune::NotImplemented, preconditioner_ << " is not a known preconditioner");
-
- ///////////////////////////////////////////////////////////////////////////////
- // Apply the damped correction to the current interface value
- ///////////////////////////////////////////////////////////////////////////////
-
- typename std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> >::iterator it = lambda.begin();
- ForceIterator fIt = interfaceCorrection.begin();
- for (; it!=lambda.end(); ++it, ++fIt) {
- assert(it->first == fIt->first);
- fIt->second *= richardsonDamping_;
- it->second = RigidBodyMotion<double,3>::exp(it->second, fIt->second);
+
+ std::cout << "resultant rod interface corrections: " << std::endl;
+ for (ForceIterator it = rodCorrection.begin(); it != rodCorrection.end(); ++it)
+ std::cout << " [" << it->first.first << ", " << it->first.second << "] -- "
+ << it->second << std::endl;
+
+ }
+
+ std::map<std::pair<std::string,std::string>, RigidBodyMotion<double,3>::TangentVector> interfaceCorrection;
+
+ if (preconditioner_=="DirichletNeumann") {
+
+ interfaceCorrection = continuumCorrection;
+
+ } else if (preconditioner_=="NeumannDirichlet") {
+
+ interfaceCorrection = rodCorrection;
+
+ } else if (preconditioner_=="NeumannNeumann") {
+
+ std::cout << "resultant interface corrections: " << std::endl;
+ for (ForceIterator it = rodCorrection.begin(); it != rodCorrection.end(); ++it) {
+
+ const std::pair<std::string,std::string> interfaceName = it->first;
+
+ std::cout << " [" << interfaceName.first << ", " << interfaceName.second << "]"
+ << " -- " << it->second
+ << " -- " << continuumCorrection[interfaceName] << std::endl;
+
+ // Compute weighted combination of both
+ RigidBodyMotion<double,3>::TangentVector& correction = interfaceCorrection[interfaceName];
+ for (int j=0; j<6; j++)
+ correction[j] = (alpha_[0] * continuumCorrection[interfaceName][j] + alpha_[1] * rodCorrection[interfaceName][j])
+ / (alpha_[0] + alpha_[1]);
+
}
+
+ } else if (preconditioner_=="RobinRobin") {
+
+ DUNE_THROW(Dune::NotImplemented, "Robin-Robin preconditioner not implemented yet");
+
+ } else
+ DUNE_THROW(Dune::NotImplemented, preconditioner_ << " is not a known preconditioner");
+
+ ///////////////////////////////////////////////////////////////////////////////
+ // Apply the damped correction to the current interface value
+ ///////////////////////////////////////////////////////////////////////////////
+
+ typename std::map<std::pair<std::string,std::string>,RigidBodyMotion<double,3> >::iterator it = lambda.begin();
+ ForceIterator fIt = interfaceCorrection.begin();
+ for (; it!=lambda.end(); ++it, ++fIt) {
+ assert(it->first == fIt->first);
+ fIt->second *= richardsonDamping_;
+ it->second = RigidBodyMotion<double,3>::exp(it->second, fIt->second);
+ }
}
#endif
diff --git a/dune/gfe/densities/bulkcosseratdensity.hh b/dune/gfe/densities/bulkcosseratdensity.hh
index faa1fb80..9f4cddbd 100644
--- a/dune/gfe/densities/bulkcosseratdensity.hh
+++ b/dune/gfe/densities/bulkcosseratdensity.hh
@@ -12,85 +12,85 @@
namespace Dune::GFE {
-template<class field_type = double, class ctype = double>
-class BulkCosseratDensity final
+ template<class field_type = double, class ctype = double>
+ class BulkCosseratDensity final
: public GFE::LocalDensity<3,field_type,ctype>
-{
-private:
- // gridDim = 3 - this can be hardwired here, because BulkCosseratDensity only works for 3d->3d problems
- static const int gridDim = 3;
- static const int embeddedDim = Rotation<field_type,gridDim>::embeddedDim;
- using OrientationDerivativeType = FieldMatrix<field_type, embeddedDim, gridDim>;
-
- static FieldMatrix<field_type,gridDim,gridDim> curl(const Tensor3<field_type,gridDim,gridDim,gridDim>& DR)
{
+ private:
+ // gridDim = 3 - this can be hardwired here, because BulkCosseratDensity only works for 3d->3d problems
+ static const int gridDim = 3;
+ static const int embeddedDim = Rotation<field_type,gridDim>::embeddedDim;
+ using OrientationDerivativeType = FieldMatrix<field_type, embeddedDim, gridDim>;
+
+ static FieldMatrix<field_type,gridDim,gridDim> curl(const Tensor3<field_type,gridDim,gridDim,gridDim>& DR)
+ {
FieldMatrix<field_type,gridDim,gridDim> result;
for (int i=0; i<gridDim; i++) {
- result[i][0] = DR[i][2][1] - DR[i][1][2];
- result[i][1] = DR[i][0][2] - DR[i][2][0];
- result[i][2] = DR[i][1][0] - DR[i][0][1];
+ result[i][0] = DR[i][2][1] - DR[i][1][2];
+ result[i][1] = DR[i][0][2] - DR[i][2][0];
+ result[i][2] = DR[i][1][0] - DR[i][0][1];
}
return result;
- }
-
-public:
-
- /** \brief Constructor with a set of material parameters
- * \param parameters The material parameters
- */
- BulkCosseratDensity(const ParameterTree& parameters)
- {
- mu_ = parameters.template get<double>("mu");
- lambda_ = parameters.template get<double>("lambda");
-
- // Cosserat couple modulus
- mu_c_ = parameters.template get<double>("mu_c");
-
- // Length scale parameter
- L_c_ = parameters.template get<double>("L_c");
-
- // Curvature exponent
- q_ = parameters.template get<double>("q");
-
- // Curvature parameters
- b1_ = parameters.template get<double>("b1");
- b2_ = parameters.template get<double>("b2");
- b3_ = parameters.template get<double>("b3");
- }
-
- /** \brief The energy \f$ W_{mp}(\overline{U}) \f$, as written in
- * the first equation of (4.4) in Neff's paper from 2006: A geometrically exact planar Cosserat shell model with microstructure: Existence of minimizers for zero Cosserat couple modulus
- * OR: the equation (2.27) of 2019: Refined dimensional reduction for isotropic elastic Cosserat shells with initial curvature
- */
- field_type quadraticEnergy(const GFE::CosseratStrain<field_type,3,gridDim>& U) const
- {
+ }
+
+ public:
+
+ /** \brief Constructor with a set of material parameters
+ * \param parameters The material parameters
+ */
+ BulkCosseratDensity(const ParameterTree& parameters)
+ {
+ mu_ = parameters.template get<double>("mu");
+ lambda_ = parameters.template get<double>("lambda");
+
+ // Cosserat couple modulus
+ mu_c_ = parameters.template get<double>("mu_c");
+
+ // Length scale parameter
+ L_c_ = parameters.template get<double>("L_c");
+
+ // Curvature exponent
+ q_ = parameters.template get<double>("q");
+
+ // Curvature parameters
+ b1_ = parameters.template get<double>("b1");
+ b2_ = parameters.template get<double>("b2");
+ b3_ = parameters.template get<double>("b3");
+ }
+
+ /** \brief The energy \f$ W_{mp}(\overline{U}) \f$, as written in
+ * the first equation of (4.4) in Neff's paper from 2006: A geometrically exact planar Cosserat shell model with microstructure: Existence of minimizers for zero Cosserat couple modulus
+ * OR: the equation (2.27) of 2019: Refined dimensional reduction for isotropic elastic Cosserat shells with initial curvature
+ */
+ field_type quadraticEnergy(const GFE::CosseratStrain<field_type,3,gridDim>& U) const
+ {
FieldMatrix<field_type,3,3> UMinus1 = U.matrix();
for (int i=0; i<gridDim; i++)
- UMinus1[i][i] -= 1;
+ UMinus1[i][i] -= 1;
return mu_ * GFE::sym(UMinus1).frobenius_norm2()
- + mu_c_ * GFE::skew(UMinus1).frobenius_norm2()
+ + mu_c_ * GFE::skew(UMinus1).frobenius_norm2()
#ifdef QUADRATIC_2006
- + (mu_*lambda_)/(2*mu_ + lambda_) * GFE::traceSquared(UMinus1); // GFE::traceSquared(UMinus1) = GFE::traceSquared(GFE::sym(UMinus1))
+ + (mu_*lambda_)/(2*mu_ + lambda_) * GFE::traceSquared(UMinus1); // GFE::traceSquared(UMinus1) = GFE::traceSquared(GFE::sym(UMinus1))
#else
- + lambda_/2 * GFE::traceSquared(UMinus1); // GFE::traceSquared(UMinus1) = GFE::traceSquared(GFE::sym(UMinus1))
+ + lambda_/2 * GFE::traceSquared(UMinus1); // GFE::traceSquared(UMinus1) = GFE::traceSquared(GFE::sym(UMinus1))
#endif
- }
+ }
- field_type curvatureWithWryness(const FieldMatrix<field_type,gridDim,gridDim>& R, const Tensor3<field_type,3,3,3>& DR) const
- {
+ field_type curvatureWithWryness(const FieldMatrix<field_type,gridDim,gridDim>& R, const Tensor3<field_type,3,3,3>& DR) const
+ {
// construct Wryness tensor \Gamma as in "Refined dimensional reduction for isotropic elastic Cosserat shells with initial curvature"
FieldMatrix<field_type,3,3> dRx1(0); //Derivative of R with respect to x1
FieldMatrix<field_type,3,3> dRx2(0); //Derivative of R with respect to x2
FieldMatrix<field_type,3,3> dRx3(0); //Derivative of R with respect to x3
for (int i=0; i<3; i++)
- for (int j=0; j<3; j++) {
- dRx1[i][j] = DR[i][j][0];
- dRx2[i][j] = DR[i][j][1];
- dRx3[i][j] = DR[i][j][2];
- }
+ for (int j=0; j<3; j++) {
+ dRx1[i][j] = DR[i][j][0];
+ dRx2[i][j] = DR[i][j][1];
+ dRx3[i][j] = DR[i][j][2];
+ }
FieldMatrix<field_type,3,3> wryness(0);
@@ -98,82 +98,82 @@ public:
auto axialVectorx2 = SkewMatrix<field_type,3>(transpose(R)*dRx2).axial();
auto axialVectorx3 = SkewMatrix<field_type,3>(transpose(R)*dRx3).axial();
for (int i=0; i<3; i++) {
- wryness[i][0] = axialVectorx1[i];
- wryness[i][1] = axialVectorx2[i];
- wryness[i][2] = axialVectorx3[i];
+ wryness[i][0] = axialVectorx1[i];
+ wryness[i][1] = axialVectorx2[i];
+ wryness[i][2] = axialVectorx3[i];
}
// The choice for the Frobenius norm here is b1=b2=1 and b3 = 1/3
return mu_ * L_c_ * L_c_ * (b1_ * GFE::dev(GFE::sym(wryness)).frobenius_norm2()
- + b2_ * GFE::skew(wryness).frobenius_norm2() + b3_ * GFE::traceSquared(wryness));
- }
-
- /** \brief Evaluation with the current position, the deformation value and its derivative, the orientation value and its derivative
- *
- * \param x The current position
- * \param deformationValue The deformation at the current position
- * \param deformationDerivative The derivative of the deformation at the current position
- * \param orientationValue The orientation at the current position
- * \param orientationDerivative The derivative of the orientation at the current position
- */
- field_type operator() (const FieldVector<ctype,gridDim>& x,
- const RealTuple<field_type,gridDim>& deformationValue,
- const FieldMatrix<field_type,gridDim,gridDim>& deformationDerivative,
- const Rotation<field_type,gridDim>& orientationValue,
- const OrientationDerivativeType& orientationDerivative) const
- {
- field_type strainEnergyDensity = 0;
- /////////////////////////////////////////////////////////
- // compute U, the Cosserat strain
- /////////////////////////////////////////////////////////
-
- FieldMatrix<field_type,gridDim,gridDim> R;
- orientationValue.matrix(R);
-
- GFE::CosseratStrain<field_type,gridDim,gridDim> U(deformationDerivative,R);
-
- /////////////////////////////////////////////////////////////////////
- // Transfer the derivative of the rotation into matrix coordinates
- ////////////////////////////////////////////////////////////////////
-
- Tensor3<field_type,3,3,gridDim> DR = orientationValue.quaternionTangentToMatrixTangent(orientationDerivative);
- strainEnergyDensity = quadraticEnergy(U);
+ + b2_ * GFE::skew(wryness).frobenius_norm2() + b3_ * GFE::traceSquared(wryness));
+ }
+
+ /** \brief Evaluation with the current position, the deformation value and its derivative, the orientation value and its derivative
+ *
+ * \param x The current position
+ * \param deformationValue The deformation at the current position
+ * \param deformationDerivative The derivative of the deformation at the current position
+ * \param orientationValue The orientation at the current position
+ * \param orientationDerivative The derivative of the orientation at the current position
+ */
+ field_type operator() (const FieldVector<ctype,gridDim>& x,
+ const RealTuple<field_type,gridDim>& deformationValue,
+ const FieldMatrix<field_type,gridDim,gridDim>& deformationDerivative,
+ const Rotation<field_type,gridDim>& orientationValue,
+ const OrientationDerivativeType& orientationDerivative) const
+ {
+ field_type strainEnergyDensity = 0;
+ /////////////////////////////////////////////////////////
+ // compute U, the Cosserat strain
+ /////////////////////////////////////////////////////////
+
+ FieldMatrix<field_type,gridDim,gridDim> R;
+ orientationValue.matrix(R);
+
+ GFE::CosseratStrain<field_type,gridDim,gridDim> U(deformationDerivative,R);
+
+ /////////////////////////////////////////////////////////////////////
+ // Transfer the derivative of the rotation into matrix coordinates
+ ////////////////////////////////////////////////////////////////////
+
+ Tensor3<field_type,3,3,gridDim> DR = orientationValue.quaternionTangentToMatrixTangent(orientationDerivative);
+ strainEnergyDensity = quadraticEnergy(U);
#ifdef CURVATURE_WITH_WRYNESS
- strainEnergyDensity += curvatureWithWryness(R,DR);
+ strainEnergyDensity += curvatureWithWryness(R,DR);
#else
-
+
#ifdef DONT_USE_CURL
- auto argument = DR;
+ auto argument = DR;
#else
- auto argument = curl(DR);
+ auto argument = curl(DR);
#endif
- auto norm = (b1_ * GFE::dev(GFE::sym(argument)).frobenius_norm2()
- + b2_ * GFE::skew(argument).frobenius_norm2() + b3_ * GFE::traceSquared(argument));
+ auto norm = (b1_ * GFE::dev(GFE::sym(argument)).frobenius_norm2()
+ + b2_ * GFE::skew(argument).frobenius_norm2() + b3_ * GFE::traceSquared(argument));
- strainEnergyDensity += mu_ * std::pow(L_c_ * L_c_ * norm,q_/2.0);
+ strainEnergyDensity += mu_ * std::pow(L_c_ * L_c_ * norm,q_/2.0);
#endif
- return strainEnergyDensity;
- }
+ return strainEnergyDensity;
+ }
- /** \brief Lame constants */
- double mu_, lambda_;
+ /** \brief Lame constants */
+ double mu_, lambda_;
- /** \brief Cosserat couple modulus, preferably 0 */
- double mu_c_;
+ /** \brief Cosserat couple modulus, preferably 0 */
+ double mu_c_;
- /** \brief Length scale parameter */
- double L_c_;
+ /** \brief Length scale parameter */
+ double L_c_;
- /** \brief Curvature exponent */
- double q_;
+ /** \brief Curvature exponent */
+ double q_;
- /** \brief Curvature parameters */
- double b1_, b2_, b3_;
+ /** \brief Curvature parameters */
+ double b1_, b2_, b3_;
-};
+ };
} // namespace GFE
diff --git a/dune/gfe/densities/localdensity.hh b/dune/gfe/densities/localdensity.hh
index c1c11262..8f29d58d 100644
--- a/dune/gfe/densities/localdensity.hh
+++ b/dune/gfe/densities/localdensity.hh
@@ -7,33 +7,33 @@
namespace Dune::GFE {
-/** \brief A base class for energy densities to be evaluated in an integral energy
- *
- * \tparam field_type type of the gradient entries
- * \tparam ctype type of the coordinates
- */
-template<int dim, class field_type = double, class ctype = double>
-class LocalDensity
-{
-private:
- static const int embeddedDim = Rotation<field_type,dim>::embeddedDim;
-public:
-
- /** \brief Evaluation with the current position, the deformation function, the deformation gradient, the rotation and the rotation gradient
+ /** \brief A base class for energy densities to be evaluated in an integral energy
*
- * \param x The current position
- * \param deformationValue The deformation at the current position
- * \param deformationDerivative The derivative of the deformation at the current position
- * \param orientationValue The orientation at the current position
- * \param orientationDerivative The derivative of the orientation at the current position
+ * \tparam field_type type of the gradient entries
+ * \tparam ctype type of the coordinates
*/
- virtual field_type operator() (const FieldVector<ctype,dim>& x,
- const RealTuple<field_type,dim>& deformation,
- const FieldMatrix<field_type,dim,dim>& gradient,
- const Rotation<field_type,dim>& rotation,
- const FieldMatrix<field_type, embeddedDim, dim>& rotationGradient) const = 0;
+ template<int dim, class field_type = double, class ctype = double>
+ class LocalDensity
+ {
+ private:
+ static const int embeddedDim = Rotation<field_type,dim>::embeddedDim;
+ public:
+
+ /** \brief Evaluation with the current position, the deformation function, the deformation gradient, the rotation and the rotation gradient
+ *
+ * \param x The current position
+ * \param deformationValue The deformation at the current position
+ * \param deformationDerivative The derivative of the deformation at the current position
+ * \param orientationValue The orientation at the current position
+ * \param orientationDerivative The derivative of the orientation at the current position
+ */
+ virtual field_type operator() (const FieldVector<ctype,dim>& x,
+ const RealTuple<field_type,dim>& deformation,
+ const FieldMatrix<field_type,dim,dim>& gradient,
+ const Rotation<field_type,dim>& rotation,
+ const FieldMatrix<field_type, embeddedDim, dim>& rotationGradient) const = 0;
-};
+ };
} // namespace Dune::GFE
diff --git a/dune/gfe/embeddedglobalgfefunction.hh b/dune/gfe/embeddedglobalgfefunction.hh
index afeede5b..fabc5f2d 100644
--- a/dune/gfe/embeddedglobalgfefunction.hh
+++ b/dune/gfe/embeddedglobalgfefunction.hh
@@ -20,369 +20,369 @@
namespace Dune::GFE {
-template<typename EGGF>
-class EmbeddedGlobalGFEFunctionDerivative;
-
-/**
- * \brief A geometric finite element function with an embedding into Euclidean space
- *
- * The `GlobalGFEFunction` implements a geometric finite element function.
- * The values of that function implement the `TargetSpace` model.
- * In contrast, the values of the `EmbeddedGlobalGFEFunction` implemented here
- * are the corresponding values in Euclidean space. The precise type is
- * `TargetSpace::CoordinateType`, which is typically a vector or matrix type.
- *
- * \tparam B Type of global scalar(!) basis
- * \tparam LIR Local interpolation rule for manifold-valued data
- * \tparam TargetSpace Range type of this function
- */
-template<typename B, typename LIR, typename TargetSpace>
-class EmbeddedGlobalGFEFunction
-// There is no separate base class for EmbeddedGlobalGFEFunction, because the base class
-// only handles coefficients and indices. It is independent of the type of function values.
+ template<typename EGGF>
+ class EmbeddedGlobalGFEFunctionDerivative;
+
+ /**
+ * \brief A geometric finite element function with an embedding into Euclidean space
+ *
+ * The `GlobalGFEFunction` implements a geometric finite element function.
+ * The values of that function implement the `TargetSpace` model.
+ * In contrast, the values of the `EmbeddedGlobalGFEFunction` implemented here
+ * are the corresponding values in Euclidean space. The precise type is
+ * `TargetSpace::CoordinateType`, which is typically a vector or matrix type.
+ *
+ * \tparam B Type of global scalar(!) basis
+ * \tparam LIR Local interpolation rule for manifold-valued data
+ * \tparam TargetSpace Range type of this function
+ */
+ template<typename B, typename LIR, typename TargetSpace>
+ class EmbeddedGlobalGFEFunction
+ // There is no separate base class for EmbeddedGlobalGFEFunction, because the base class
+ // only handles coefficients and indices. It is independent of the type of function values.
#if DUNE_VERSION_LTE(DUNE_FUFEM, 2, 9)
- : public Impl::GlobalGFEFunctionBase<B, std::vector<TargetSpace>, LIR, typename TargetSpace::CoordinateType>
+ : public Impl::GlobalGFEFunctionBase<B, std::vector<TargetSpace>, LIR, typename TargetSpace::CoordinateType>
#else
- : public Impl::GlobalGFEFunctionBase<B, std::vector<TargetSpace>, LIR>
+ : public Impl::GlobalGFEFunctionBase<B, std::vector<TargetSpace>, LIR>
#endif
-{
+ {
#if DUNE_VERSION_LTE(DUNE_FUFEM, 2, 9)
- using Base = Impl::GlobalGFEFunctionBase<B, std::vector<TargetSpace>, LIR, typename TargetSpace::CoordinateType>;
+ using Base = Impl::GlobalGFEFunctionBase<B, std::vector<TargetSpace>, LIR, typename TargetSpace::CoordinateType>;
#else
- using Base = Impl::GlobalGFEFunctionBase<B, std::vector<TargetSpace>, LIR>;
- using Data = typename Base::Data;
+ using Base = Impl::GlobalGFEFunctionBase<B, std::vector<TargetSpace>, LIR>;
+ using Data = typename Base::Data;
#endif
-public:
- using Basis = typename Base::Basis;
- using Vector = typename Base::Vector;
+ public:
+ using Basis = typename Base::Basis;
+ using Vector = typename Base::Vector;
#if DUNE_VERSION_LTE(DUNE_FUFEM, 2, 9)
- using Data = typename Impl::Data<Basis,Vector>;
+ using Data = typename Impl::Data<Basis,Vector>;
#endif
- using LocalInterpolationRule = LIR;
+ using LocalInterpolationRule = LIR;
- using Domain = typename Base::Domain;
- using Range = typename TargetSpace::CoordinateType;
+ using Domain = typename Base::Domain;
+ using Range = typename TargetSpace::CoordinateType;
- using Traits = Functions::Imp::GridFunctionTraits<Range(Domain), typename Base::EntitySet, Functions::DefaultDerivativeTraits, 16>;
+ using Traits = Functions::Imp::GridFunctionTraits<Range(Domain), typename Base::EntitySet, Functions::DefaultDerivativeTraits, 16>;
- class LocalFunction
- : public Base::LocalFunctionBase
- {
- using LocalBase = typename Base::LocalFunctionBase;
- using size_type = typename Base::Tree::size_type;
-
- public:
+ class LocalFunction
+ : public Base::LocalFunctionBase
+ {
+ using LocalBase = typename Base::LocalFunctionBase;
+ using size_type = typename Base::Tree::size_type;
+
+ public:
+
+ using GlobalFunction = EmbeddedGlobalGFEFunction;
+ using Domain = typename LocalBase::Domain;
+ using Range = GlobalFunction::Range;
+ using Element = typename LocalBase::Element;
+
+ //! Create a local-function from the associated grid-function
+ LocalFunction(const EmbeddedGlobalGFEFunction& globalFunction)
+ : LocalBase(globalFunction.data_)
+ {
+ /* Nothing. */
+ }
+
+ /**
+ * \brief Evaluate this local-function in coordinates `x` in the bound element.
+ *
+ * The result of this method is undefined if you did
+ * not call bind() beforehand or changed the coefficient
+ * vector after the last call to bind(). In the latter case
+ * you have to call bind() again in order to make operator()
+ * usable.
+ */
+ Range operator()(const Domain& x) const
+ {
+ return this->localInterpolationRule_->evaluate(x).globalCoordinates();
+ }
+
+ //! Local function of the derivative
+ friend typename EmbeddedGlobalGFEFunctionDerivative<EmbeddedGlobalGFEFunction>::LocalFunction derivative(const LocalFunction& lf)
+ {
+ auto dlf = localFunction(EmbeddedGlobalGFEFunctionDerivative<EmbeddedGlobalGFEFunction>(lf.data_));
+ if (lf.bound())
+ dlf.bind(lf.localContext());
+ return dlf;
+ }
+ };
+
+ //! Create a grid-function, by wrapping the arguments in `std::shared_ptr`.
+ template<class B_T, class V_T>
+ EmbeddedGlobalGFEFunction(B_T && basis, V_T && coefficients)
+ : Base(std::make_shared<Data>(Data{{basis.gridView()}, wrap_or_move(std::forward<B_T>(basis)), wrap_or_move(std::forward<V_T>(coefficients))}))
+ {}
+
+ //! Create a grid-function, by moving the arguments in `std::shared_ptr`.
+ EmbeddedGlobalGFEFunction(std::shared_ptr<const Basis> basis, std::shared_ptr<const Vector> coefficients)
+ : Base(std::make_shared<Data>(Data{{basis->gridView()}, basis, coefficients}))
+ {}
+
+ /** \brief Evaluate at a point given in world coordinates
+ *
+ * \warning This has to find the element that the evaluation point is in.
+ * It is therefore very slow.
+ */
+ Range operator() (const Domain& x) const
+ {
+ HierarchicSearch search(this->data_->basis->gridView().grid(), this->data_->basis->gridView().indexSet());
- using GlobalFunction = EmbeddedGlobalGFEFunction;
- using Domain = typename LocalBase::Domain;
- using Range = GlobalFunction::Range;
- using Element = typename LocalBase::Element;
+ const auto e = search.findEntity(x);
+ auto localThis = localFunction(*this);
+ localThis.bind(e);
+ return localThis(e.geometry().local(x));
+ }
- //! Create a local-function from the associated grid-function
- LocalFunction(const EmbeddedGlobalGFEFunction& globalFunction)
- : LocalBase(globalFunction.data_)
+ //! Derivative of the `EmbeddedGlobalGFEFunction`
+ friend EmbeddedGlobalGFEFunctionDerivative<EmbeddedGlobalGFEFunction> derivative(const EmbeddedGlobalGFEFunction& f)
{
- /* Nothing. */
+ return EmbeddedGlobalGFEFunctionDerivative<EmbeddedGlobalGFEFunction>(f.data_);
}
/**
- * \brief Evaluate this local-function in coordinates `x` in the bound element.
+ * \brief Construct local function from a EmbeddedGlobalGFEFunction.
*
- * The result of this method is undefined if you did
- * not call bind() beforehand or changed the coefficient
- * vector after the last call to bind(). In the latter case
- * you have to call bind() again in order to make operator()
- * usable.
+ * The obtained local function satisfies the concept
+ * `Dune::Functions::Concept::LocalFunction`. It must be bound
+ * to an entity from the entity set of the EmbeddedGlobalGFEFunction
+ * before it can be used.
*/
- Range operator()(const Domain& x) const
+ friend LocalFunction localFunction(const EmbeddedGlobalGFEFunction& t)
{
- return this->localInterpolationRule_->evaluate(x).globalCoordinates();
+ return LocalFunction(t);
}
- //! Local function of the derivative
- friend typename EmbeddedGlobalGFEFunctionDerivative<EmbeddedGlobalGFEFunction>::LocalFunction derivative(const LocalFunction& lf)
+#if DUNE_VERSION_LTE(DUNE_FUFEM, 2, 9)
+ using Element = typename Basis::GridView::template Codim<0>::Entity;
+ /** \brief Evaluate the function at local coordinates. */
+ void evaluateLocal(const Element& element, const Domain& local, typename TargetSpace::CoordinateType& out) const override
{
- auto dlf = localFunction(EmbeddedGlobalGFEFunctionDerivative<EmbeddedGlobalGFEFunction>(lf.data_));
- if (lf.bound())
- dlf.bind(lf.localContext());
- return dlf;
+ out = this->operator()(element,local);
}
- };
- //! Create a grid-function, by wrapping the arguments in `std::shared_ptr`.
- template<class B_T, class V_T>
- EmbeddedGlobalGFEFunction(B_T && basis, V_T && coefficients)
- : Base(std::make_shared<Data>(Data{{basis.gridView()}, wrap_or_move(std::forward<B_T>(basis)), wrap_or_move(std::forward<V_T>(coefficients))}))
- {}
+ /** \brief Evaluate the function at local coordinates. */
+ typename TargetSpace::CoordinateType operator()(const Element& element, const Domain& local) const
+ {
+ auto localView = this->basis().localView();
+ localView.bind(element);
+ auto numOfBaseFct = localView.size();
- //! Create a grid-function, by moving the arguments in `std::shared_ptr`.
- EmbeddedGlobalGFEFunction(std::shared_ptr<const Basis> basis, std::shared_ptr<const Vector> coefficients)
- : Base(std::make_shared<Data>(Data{{basis->gridView()}, basis, coefficients}))
- {}
+ // Extract local coefficients
+ std::vector<TargetSpace> localCoeff(numOfBaseFct);
- /** \brief Evaluate at a point given in world coordinates
- *
- * \warning This has to find the element that the evaluation point is in.
- * It is therefore very slow.
- */
- Range operator() (const Domain& x) const
- {
- HierarchicSearch search(this->data_->basis->gridView().grid(), this->data_->basis->gridView().indexSet());
+ for (size_t i=0; i<numOfBaseFct; i++)
+ localCoeff[i] = this->dofs()[localView.index(i)];
- const auto e = search.findEntity(x);
- auto localThis = localFunction(*this);
- localThis.bind(e);
- return localThis(e.geometry().local(x));
- }
+ // create local gfe function
+ LocalInterpolationRule localInterpolationRule(localView.tree().finiteElement(),localCoeff);
+ return localInterpolationRule.evaluate(local).globalCoordinates();
+ }
- //! Derivative of the `EmbeddedGlobalGFEFunction`
- friend EmbeddedGlobalGFEFunctionDerivative<EmbeddedGlobalGFEFunction> derivative(const EmbeddedGlobalGFEFunction& f)
- {
- return EmbeddedGlobalGFEFunctionDerivative<EmbeddedGlobalGFEFunction>(f.data_);
- }
+ /** \brief evaluation of derivative in local coordinates
+ *
+ * \param e Evaluate in local coordinates with respect to this element.
+ * \param x point in local coordinates at which to evaluate the derivative
+ * \param d will contain the derivative at x after return
+ */
+ void evaluateDerivativeLocal(const Element& element, const Domain& local,
+ typename Functions::SignatureTraits<typename EmbeddedGlobalGFEFunction::Traits::DerivativeInterface>::Range& out) const override
+ {
+ auto localView = this->basis().localView();
+ localView.bind(element);
+ auto numOfBaseFct = localView.size();
- /**
- * \brief Construct local function from a EmbeddedGlobalGFEFunction.
- *
- * The obtained local function satisfies the concept
- * `Dune::Functions::Concept::LocalFunction`. It must be bound
- * to an entity from the entity set of the EmbeddedGlobalGFEFunction
- * before it can be used.
- */
- friend LocalFunction localFunction(const EmbeddedGlobalGFEFunction& t)
- {
- return LocalFunction(t);
- }
+ // Extract local coefficients
+ std::vector<TargetSpace> localCoeff(numOfBaseFct);
-#if DUNE_VERSION_LTE(DUNE_FUFEM, 2, 9)
- using Element = typename Basis::GridView::template Codim<0>::Entity;
- /** \brief Evaluate the function at local coordinates. */
- void evaluateLocal(const Element& element, const Domain& local, typename TargetSpace::CoordinateType& out) const override
- {
- out = this->operator()(element,local);
- }
+ for (decltype(numOfBaseFct) i=0; i<numOfBaseFct; i++)
+ localCoeff[i] = this->dofs()[localView.index(i)];
- /** \brief Evaluate the function at local coordinates. */
- typename TargetSpace::CoordinateType operator()(const Element& element, const Domain& local) const
- {
- auto localView = this->basis().localView();
- localView.bind(element);
- auto numOfBaseFct = localView.size();
+ // create local gfe function
+ LocalInterpolationRule localInterpolationRule(localView.tree().finiteElement(),localCoeff);
+
+ // use it to evaluate the derivative
+ auto refJac = localInterpolationRule.evaluateDerivative(local);
- // Extract local coefficients
- std::vector<TargetSpace> localCoeff(numOfBaseFct);
+ out =0.0;
- for (size_t i=0; i<numOfBaseFct; i++)
- localCoeff[i] = this->dofs()[localView.index(i)];
+ //transform the gradient
+ const auto jacInvTrans = element.geometry().jacobianInverseTransposed(local);
+ for (size_t k=0; k< refJac.N(); k++)
+ jacInvTrans.umv(refJac[k],out[k]);
+ }
+#endif
+ };
- // create local gfe function
- LocalInterpolationRule localInterpolationRule(localView.tree().finiteElement(),localCoeff);
- return localInterpolationRule.evaluate(local).globalCoordinates();
- }
- /** \brief evaluation of derivative in local coordinates
+ /**
+ * \brief Derivative of a `EmbeddedGlobalGFEFunction`
+ *
+ * Function returning the derivative of the given `EmbeddedGlobalGFEFunction`
+ * with respect to global coordinates.
*
- * \param e Evaluate in local coordinates with respect to this element.
- * \param x point in local coordinates at which to evaluate the derivative
- * \param d will contain the derivative at x after return
+ * \tparam EGGF instance of the `EmbeddedGlobalGFEFunction` this is a derivative of
*/
- void evaluateDerivativeLocal(const Element& element, const Domain& local,
- typename Functions::SignatureTraits<typename EmbeddedGlobalGFEFunction::Traits::DerivativeInterface>::Range& out) const override
- {
- auto localView = this->basis().localView();
- localView.bind(element);
- auto numOfBaseFct = localView.size();
-
- // Extract local coefficients
- std::vector<TargetSpace> localCoeff(numOfBaseFct);
-
- for (decltype(numOfBaseFct) i=0; i<numOfBaseFct; i++)
- localCoeff[i] = this->dofs()[localView.index(i)];
-
- // create local gfe function
- LocalInterpolationRule localInterpolationRule(localView.tree().finiteElement(),localCoeff);
-
- // use it to evaluate the derivative
- auto refJac = localInterpolationRule.evaluateDerivative(local);
-
- out =0.0;
-
- //transform the gradient
- const auto jacInvTrans = element.geometry().jacobianInverseTransposed(local);
- for (size_t k=0; k< refJac.N(); k++)
- jacInvTrans.umv(refJac[k],out[k]);
- }
-#endif
-};
-
-
-/**
- * \brief Derivative of a `EmbeddedGlobalGFEFunction`
- *
- * Function returning the derivative of the given `EmbeddedGlobalGFEFunction`
- * with respect to global coordinates.
- *
- * \tparam EGGF instance of the `EmbeddedGlobalGFEFunction` this is a derivative of
- */
-template<typename EGGF>
-class EmbeddedGlobalGFEFunctionDerivative
-// There is no separate base class for EmbeddedGlobalGFEFunction, because the base class
-// only handles coefficients and indices. It is independent of the type of function values.
+ template<typename EGGF>
+ class EmbeddedGlobalGFEFunctionDerivative
+ // There is no separate base class for EmbeddedGlobalGFEFunction, because the base class
+ // only handles coefficients and indices. It is independent of the type of function values.
#if DUNE_VERSION_LTE(DUNE_FUFEM, 2, 9)
- : public Impl::GlobalGFEFunctionBase<typename EGGF::Basis, typename EGGF::Vector, typename EGGF::LocalInterpolationRule,
- Dune::FieldMatrix<double, EGGF::Vector::value_type::EmbeddedTangentVector::dimension, EGGF::Basis::GridView::dimensionworld> >
+ : public Impl::GlobalGFEFunctionBase<typename EGGF::Basis, typename EGGF::Vector, typename EGGF::LocalInterpolationRule,
+ Dune::FieldMatrix<double, EGGF::Vector::value_type::EmbeddedTangentVector::dimension, EGGF::Basis::GridView::dimensionworld> >
#else
- : public Impl::GlobalGFEFunctionBase<typename EGGF::Basis, typename EGGF::Vector, typename EGGF::LocalInterpolationRule>
+ : public Impl::GlobalGFEFunctionBase<typename EGGF::Basis, typename EGGF::Vector, typename EGGF::LocalInterpolationRule>
#endif
-{
+ {
#if DUNE_VERSION_LTE(DUNE_FUFEM, 2, 9)
- using Base = Impl::GlobalGFEFunctionBase<typename EGGF::Basis, typename EGGF::Vector, typename EGGF::LocalInterpolationRule,
- Dune::FieldMatrix<double, EGGF::Vector::value_type::EmbeddedTangentVector::dimension, EGGF::Basis::GridView::dimensionworld> >;
+ using Base = Impl::GlobalGFEFunctionBase<typename EGGF::Basis, typename EGGF::Vector, typename EGGF::LocalInterpolationRule,
+ Dune::FieldMatrix<double, EGGF::Vector::value_type::EmbeddedTangentVector::dimension, EGGF::Basis::GridView::dimensionworld> >;
#else
- using Base = Impl::GlobalGFEFunctionBase<typename EGGF::Basis, typename EGGF::Vector, typename EGGF::LocalInterpolationRule>;
- using Data = typename Base::Data;
+ using Base = Impl::GlobalGFEFunctionBase<typename EGGF::Basis, typename EGGF::Vector, typename EGGF::LocalInterpolationRule>;
+ using Data = typename Base::Data;
#endif
-public:
- using EmbeddedGlobalGFEFunction = EGGF;
+ public:
+ using EmbeddedGlobalGFEFunction = EGGF;
- using Basis = typename Base::Basis;
- using Vector = typename Base::Vector;
+ using Basis = typename Base::Basis;
+ using Vector = typename Base::Vector;
#if DUNE_VERSION_LTE(DUNE_FUFEM, 2, 9)
- using Data = typename Impl::Data<Basis,Vector>;
+ using Data = typename Impl::Data<Basis,Vector>;
#endif
- using Domain = typename Base::Domain;
- using Range = typename Functions::SignatureTraits<typename EmbeddedGlobalGFEFunction::Traits::DerivativeInterface>::Range;
+ using Domain = typename Base::Domain;
+ using Range = typename Functions::SignatureTraits<typename EmbeddedGlobalGFEFunction::Traits::DerivativeInterface>::Range;
- using Traits = Functions::Imp::GridFunctionTraits<Range(Domain), typename Base::EntitySet, Functions::DefaultDerivativeTraits, 16>;
-
- /**
- * \brief local function evaluating the derivative in reference coordinates
- *
- * Note that the function returns the derivative with respect to global
- * coordinates even when the point is given in reference coordinates on
- * an element.
- */
- class LocalFunction
- : public Base::LocalFunctionBase
- {
- using LocalBase = typename Base::LocalFunctionBase;
- using size_type = typename Base::Tree::size_type;
-
- public:
- using GlobalFunction = EmbeddedGlobalGFEFunctionDerivative;
- using Domain = typename LocalBase::Domain;
- using Range = GlobalFunction::Range;
- using Element = typename LocalBase::Element;
-
- //! Create a local function from the associated grid function
- LocalFunction(const GlobalFunction& globalFunction)
- : LocalBase(globalFunction.data_)
- {
- /* Nothing. */
- }
+ using Traits = Functions::Imp::GridFunctionTraits<Range(Domain), typename Base::EntitySet, Functions::DefaultDerivativeTraits, 16>;
/**
- * \brief Bind LocalFunction to grid element.
+ * \brief local function evaluating the derivative in reference coordinates
*
- * You must call this method before `operator()`
- * and after changes to the coefficient vector.
+ * Note that the function returns the derivative with respect to global
+ * coordinates even when the point is given in reference coordinates on
+ * an element.
*/
- void bind(const Element& element)
+ class LocalFunction
+ : public Base::LocalFunctionBase
{
- LocalBase::bind(element);
- geometry_.emplace(element.geometry());
- }
+ using LocalBase = typename Base::LocalFunctionBase;
+ using size_type = typename Base::Tree::size_type;
+
+ public:
+ using GlobalFunction = EmbeddedGlobalGFEFunctionDerivative;
+ using Domain = typename LocalBase::Domain;
+ using Range = GlobalFunction::Range;
+ using Element = typename LocalBase::Element;
+
+ //! Create a local function from the associated grid function
+ LocalFunction(const GlobalFunction& globalFunction)
+ : LocalBase(globalFunction.data_)
+ {
+ /* Nothing. */
+ }
+
+ /**
+ * \brief Bind LocalFunction to grid element.
+ *
+ * You must call this method before `operator()`
+ * and after changes to the coefficient vector.
+ */
+ void bind(const Element& element)
+ {
+ LocalBase::bind(element);
+ geometry_.emplace(element.geometry());
+ }
+
+ //! Unbind the local-function.
+ void unbind()
+ {
+ geometry_.reset();
+ LocalBase::unbind();
+ }
+
+ /**
+ * \brief Evaluate this local-function in coordinates `x` in the bound element.
+ *
+ * The result of this method is undefined if you did
+ * not call bind() beforehand or changed the coefficient
+ * vector after the last call to bind(). In the latter case
+ * you have to call bind() again in order to make operator()
+ * usable.
+ *
+ * Note that the function returns the derivative with respect to global
+ * coordinates even though the evaluation point is given in reference coordinates
+ * on the current element.
+ */
+ Range operator()(const Domain& x) const
+ {
+ // Jacobian with respect to local coordinates
+ auto refJac = this->localInterpolationRule_->evaluateDerivative(x);
- //! Unbind the local-function.
- void unbind()
- {
- geometry_.reset();
- LocalBase::unbind();
- }
+ // Transform to world coordinates
+ return refJac * geometry_->jacobianInverse(x);
+ }
+
+ //! Not implemented
+ friend typename Traits::LocalFunctionTraits::DerivativeInterface derivative(const LocalFunction&)
+ {
+ DUNE_THROW(NotImplemented, "derivative of derivative is not implemented");
+ }
+
+ private:
+ std::optional<typename Element::Geometry> geometry_;
+ };
/**
- * \brief Evaluate this local-function in coordinates `x` in the bound element.
+ * \brief create object from `EmbeddedGlobalGFEFunction` data
*
- * The result of this method is undefined if you did
- * not call bind() beforehand or changed the coefficient
- * vector after the last call to bind(). In the latter case
- * you have to call bind() again in order to make operator()
- * usable.
+ * Please call `derivative(embeddedGlobalGFEFunction)` to create an instance
+ * of this class.
+ */
+ EmbeddedGlobalGFEFunctionDerivative(const std::shared_ptr<const Data>& data)
+ : Base(data)
+ {
+ /* Nothing. */
+ }
+
+ /** \brief Evaluate the discrete grid-function derivative in global coordinates
*
- * Note that the function returns the derivative with respect to global
- * coordinates even though the evaluation point is given in reference coordinates
- * on the current element.
+ * \warning This has to find the element that the evaluation point is in.
+ * It is therefore very slow.
*/
Range operator()(const Domain& x) const
{
- // Jacobian with respect to local coordinates
- auto refJac = this->localInterpolationRule_->evaluateDerivative(x);
+ HierarchicSearch search(this->data_->basis->gridView().grid(), this->data_->basis->gridView().indexSet());
- // Transform to world coordinates
- return refJac * geometry_->jacobianInverse(x);
+ const auto e = search.findEntity(x);
+ auto localThis = localFunction(*this);
+ localThis.bind(e);
+ return localThis(e.geometry().local(x));
}
- //! Not implemented
- friend typename Traits::LocalFunctionTraits::DerivativeInterface derivative(const LocalFunction&)
+ friend typename Traits::DerivativeInterface derivative(const EmbeddedGlobalGFEFunctionDerivative& f)
{
DUNE_THROW(NotImplemented, "derivative of derivative is not implemented");
}
- private:
- std::optional<typename Element::Geometry> geometry_;
- };
-
- /**
- * \brief create object from `EmbeddedGlobalGFEFunction` data
- *
- * Please call `derivative(embeddedGlobalGFEFunction)` to create an instance
- * of this class.
- */
- EmbeddedGlobalGFEFunctionDerivative(const std::shared_ptr<const Data>& data)
- : Base(data)
- {
- /* Nothing. */
- }
-
- /** \brief Evaluate the discrete grid-function derivative in global coordinates
- *
- * \warning This has to find the element that the evaluation point is in.
- * It is therefore very slow.
- */
- Range operator()(const Domain& x) const
- {
- HierarchicSearch search(this->data_->basis->gridView().grid(), this->data_->basis->gridView().indexSet());
-
- const auto e = search.findEntity(x);
- auto localThis = localFunction(*this);
- localThis.bind(e);
- return localThis(e.geometry().local(x));
- }
-
- friend typename Traits::DerivativeInterface derivative(const EmbeddedGlobalGFEFunctionDerivative& f)
- {
- DUNE_THROW(NotImplemented, "derivative of derivative is not implemented");
- }
-
- //! Construct local function from a `EmbeddedGlobalGFEFunctionDerivative`
- friend LocalFunction localFunction(const EmbeddedGlobalGFEFunctionDerivative& f)
- {
- return LocalFunction(f);
- }
+ //! Construct local function from a `EmbeddedGlobalGFEFunctionDerivative`
+ friend LocalFunction localFunction(const EmbeddedGlobalGFEFunctionDerivative& f)
+ {
+ return LocalFunction(f);
+ }
#if DUNE_VERSION_LTE(DUNE_FUFEM, 2, 9)
- using Element = typename Basis::GridView::template Codim<0>::Entity;
- /** \brief Evaluate the function at local coordinates. */
- void evaluateLocal(const Element& element, const Domain& local, Range& out) const override
- {
- // This method will never be called.
- }
+ using Element = typename Basis::GridView::template Codim<0>::Entity;
+ /** \brief Evaluate the function at local coordinates. */
+ void evaluateLocal(const Element& element, const Domain& local, Range& out) const override
+ {
+ // This method will never be called.
+ }
#endif
-};
+ };
} // namespace Dune::GFE
diff --git a/dune/gfe/filereader.hh b/dune/gfe/filereader.hh
index e0958b9d..24efd6ca 100644
--- a/dune/gfe/filereader.hh
+++ b/dune/gfe/filereader.hh
@@ -12,32 +12,32 @@ namespace Dune {
namespace GFE {
// Convert the pairs {grid vertex, vector of dimension d} in the given file to a map
template <int d>
- static std::unordered_map<std::string, FieldVector<double,d>> transformFileToMap(std::string pathToFile) {
+ static std::unordered_map<std::string, FieldVector<double,d> > transformFileToMap(std::string pathToFile) {
- std::unordered_map<std::string, FieldVector<double,d>> map;
+ std::unordered_map<std::string, FieldVector<double,d> > map;
- std::string line, displacement, entry;
+ std::string line, displacement, entry;
- std::ifstream file(pathToFile, std::ios::in);
+ std::ifstream file(pathToFile, std::ios::in);
- if (file.is_open()) {
- while (std::getline(file, line)) {
- size_t j = 0;
- size_t pos = line.find(":");
- displacement = line.substr(pos + 1);
- line.erase(pos);
- std::stringstream entries(displacement);
- FieldVector<double,d> vector(0);
- while(entries >> entry)
- vector[j++] = std::stod(entry);
- map.insert({line,vector});
- }
- file.close();
- } else {
- DUNE_THROW(Exception, "Error: Could not open the file " + pathToFile + " !");
+ if (file.is_open()) {
+ while (std::getline(file, line)) {
+ size_t j = 0;
+ size_t pos = line.find(":");
+ displacement = line.substr(pos + 1);
+ line.erase(pos);
+ std::stringstream entries(displacement);
+ FieldVector<double,d> vector(0);
+ while(entries >> entry)
+ vector[j++] = std::stod(entry);
+ map.insert({line,vector});
}
+ file.close();
+ } else {
+ DUNE_THROW(Exception, "Error: Could not open the file " + pathToFile + " !");
+ }
return map;
}
}
}
-#endif
\ No newline at end of file
+#endif
diff --git a/dune/gfe/geodesicdifference.hh b/dune/gfe/geodesicdifference.hh
index a8542362..38788d1e 100644
--- a/dune/gfe/geodesicdifference.hh
+++ b/dune/gfe/geodesicdifference.hh
@@ -9,19 +9,19 @@ template <class TargetSpace>
Dune::BlockVector<typename TargetSpace::TangentVector> computeGeodesicDifference(const std::vector<TargetSpace>& a,
const std::vector<TargetSpace>& b)
{
- if (a.size() != b.size())
- DUNE_THROW(Dune::Exception, "a and b have to have the same length!");
+ if (a.size() != b.size())
+ DUNE_THROW(Dune::Exception, "a and b have to have the same length!");
- Dune::BlockVector<typename TargetSpace::TangentVector> result(a.size());
+ Dune::BlockVector<typename TargetSpace::TangentVector> result(a.size());
- for (size_t i=0; i<result.size(); i++) {
+ for (size_t i=0; i<result.size(); i++) {
- // Subtract orientations on the tangent space of 'a'
- result[i] = TargetSpace::difference(a[i], b[i]);
+ // Subtract orientations on the tangent space of 'a'
+ result[i] = TargetSpace::difference(a[i], b[i]);
- }
+ }
- return result;
+ return result;
}
#endif
diff --git a/dune/gfe/geodesicfefunctionadaptor.hh b/dune/gfe/geodesicfefunctionadaptor.hh
index b80f325e..e070f84d 100644
--- a/dune/gfe/geodesicfefunctionadaptor.hh
+++ b/dune/gfe/geodesicfefunctionadaptor.hh
@@ -10,11 +10,11 @@ template <class Basis, class TargetSpace>
class GeodesicFEFunctionAdaptor
{
public:
-/** \brief Refine a grid globally and prolong a given geodesic finite element function
- */
-template <class GridType>
-static void geodesicFEFunctionAdaptor(GridType& grid, std::vector<TargetSpace>& x)
-{
+ /** \brief Refine a grid globally and prolong a given geodesic finite element function
+ */
+ template <class GridType>
+ static void geodesicFEFunctionAdaptor(GridType& grid, std::vector<TargetSpace>& x)
+ {
const int dim = GridType::dimension;
assert(x.size() == grid.size(dim));
@@ -29,7 +29,7 @@ static void geodesicFEFunctionAdaptor(GridType& grid, std::vector<TargetSpace>&
std::map<typename GridType::Traits::LocalIdSet::IdType, TargetSpace> dofMap;
for (const auto& vertex : vertices(grid.leafGridView()))
- dofMap.insert(std::make_pair(idSet.id(vertex), x[indexSet.index(vertex)]));
+ dofMap.insert(std::make_pair(idSet.id(vertex), x[indexSet.index(vertex)]));
@@ -49,74 +49,74 @@ static void geodesicFEFunctionAdaptor(GridType& grid, std::vector<TargetSpace>&
for (const auto& element : elements(grid.leafGridView())) {
- // Set up a local gfe function on the father element
- size_t nFatherDofs = element.father().subEntities(dim);
- std::vector<TargetSpace> coefficients(nFatherDofs);
-
- for (int i=0; i<nFatherDofs; i++)
- coefficients[i] = dofMap.find(idSet.subId(element.father(),i,dim))->second;
+ // Set up a local gfe function on the father element
+ size_t nFatherDofs = element.father().subEntities(dim);
+ std::vector<TargetSpace> coefficients(nFatherDofs);
- typedef typename P1NodalBasis<typename GridType::LeafGridView>::LocalFiniteElement LocalFiniteElement;
- LocalGeodesicFEFunction<dim,double,LocalFiniteElement,TargetSpace> fatherFunction(p1Basis.getLocalFiniteElement(element),
- coefficients);
+ for (int i=0; i<nFatherDofs; i++)
+ coefficients[i] = dofMap.find(idSet.subId(element.father(),i,dim))->second;
- // The embedding of this element into the father geometry
- const auto& geometryInFather = element.geometryInFather();
+ typedef typename P1NodalBasis<typename GridType::LeafGridView>::LocalFiniteElement LocalFiniteElement;
+ LocalGeodesicFEFunction<dim,double,LocalFiniteElement,TargetSpace> fatherFunction(p1Basis.getLocalFiniteElement(element),
+ coefficients);
- size_t nDofs = element.subEntities(dim);
- for (int i=0; i<nDofs; i++) {
+ // The embedding of this element into the father geometry
+ const auto& geometryInFather = element.geometryInFather();
- if (dofMap.find(idSet.subId(element,i,dim)) != dofMap.end()) {
+ size_t nDofs = element.subEntities(dim);
+ for (int i=0; i<nDofs; i++) {
- // If the vertex exists on the coarser level we take the value from there.
- // That should be faster and more accurate than interpolating
- x[indexSet.subIndex(element,i,dim)] = dofMap[idSet.subId(element,i,dim)];
+ if (dofMap.find(idSet.subId(element,i,dim)) != dofMap.end()) {
- } else {
+ // If the vertex exists on the coarser level we take the value from there.
+ // That should be faster and more accurate than interpolating
+ x[indexSet.subIndex(element,i,dim)] = dofMap[idSet.subId(element,i,dim)];
- // Interpolate
- x[indexSet.subIndex(element,i,dim)] = fatherFunction.evaluate(geometryInFather.corner(i));
+ } else {
- }
+ // Interpolate
+ x[indexSet.subIndex(element,i,dim)] = fatherFunction.evaluate(geometryInFather.corner(i));
}
+ }
+
}
-}
+ }
-/** \brief Coordinate function in one variable, constant in the others
+ /** \brief Coordinate function in one variable, constant in the others
- This is used to extract the positions of the Lagrange nodes.
- */
-template <int dim>
-struct CoordinateFunction
+ This is used to extract the positions of the Lagrange nodes.
+ */
+ template <int dim>
+ struct CoordinateFunction
: public Dune::VirtualFunction<Dune::FieldVector<double,dim>, Dune::FieldVector<double,1> >
-{
+ {
CoordinateFunction(int d)
- : d_(d)
+ : d_(d)
{}
void evaluate(const Dune::FieldVector<double, dim>& x, Dune::FieldVector<double,1>& out) const {
- out[0] = x[d_];
+ out[0] = x[d_];
}
//
int d_;
-};
-
-
-/** \brief Refine a grid globally and prolong a given geodesic finite element function
- *
- * \tparam order Interpolation order of the function space. Kinda stupid that I
- * have to provide this by hand. Will change...
- */
-template <int order>
-static void higherOrderGFEFunctionAdaptor(Basis& basis,
- typename Basis::GridView::Grid& grid, std::vector<TargetSpace>& x)
-{
+ };
+
+
+ /** \brief Refine a grid globally and prolong a given geodesic finite element function
+ *
+ * \tparam order Interpolation order of the function space. Kinda stupid that I
+ * have to provide this by hand. Will change...
+ */
+ template <int order>
+ static void higherOrderGFEFunctionAdaptor(Basis& basis,
+ typename Basis::GridView::Grid& grid, std::vector<TargetSpace>& x)
+ {
typedef typename Basis::GridView::Grid GridType;
const int dim = GridType::dimension;
@@ -138,14 +138,14 @@ static void higherOrderGFEFunctionAdaptor(Basis& basis,
for (; eIt!=eEndIt; ++eIt) {
- const typename Basis::LocalFiniteElement& lfe = basis.getLocalFiniteElement(*eIt);
- std::vector<TargetSpace> coefficients(lfe.localCoefficients().size());
+ const typename Basis::LocalFiniteElement& lfe = basis.getLocalFiniteElement(*eIt);
+ std::vector<TargetSpace> coefficients(lfe.localCoefficients().size());
- for (size_t i=0; i<lfe.localCoefficients().size(); i++)
- coefficients[i] = x[basis.index(*eIt, i)];
+ for (size_t i=0; i<lfe.localCoefficients().size(); i++)
+ coefficients[i] = x[basis.index(*eIt, i)];
- IdType id = idSet.id(*eIt);
- dofMap.insert(std::make_pair(id, coefficients));
+ IdType id = idSet.id(*eIt);
+ dofMap.insert(std::make_pair(id, coefficients));
}
@@ -167,44 +167,44 @@ static void higherOrderGFEFunctionAdaptor(Basis& basis,
for (eIt=grid.template leafbegin<0>(); eIt!=eEndIt; ++eIt) {
- const typename Basis::LocalFiniteElement& lfe = basis.getLocalFiniteElement(*eIt);
+ const typename Basis::LocalFiniteElement& lfe = basis.getLocalFiniteElement(*eIt);
- typedef typename Dune::PQkLocalFiniteElementFactory<double,double,dim,order>::FiniteElementType FatherFiniteElementType;
+ typedef typename Dune::PQkLocalFiniteElementFactory<double,double,dim,order>::FiniteElementType FatherFiniteElementType;
- auto fatherLFE = std::unique_ptr<FatherFiniteElementType>(Dune::PQkLocalFiniteElementFactory<double,double,dim,order>::create(eIt->father()->type()));
+ auto fatherLFE = std::unique_ptr<FatherFiniteElementType>(Dune::PQkLocalFiniteElementFactory<double,double,dim,order>::create(eIt->father()->type()));
- // Set up a local gfe function on the father element
- std::vector<TargetSpace> coefficients = dofMap[idSet.id(*eIt->father())];
+ // Set up a local gfe function on the father element
+ std::vector<TargetSpace> coefficients = dofMap[idSet.id(*eIt->father())];
- LocalGeodesicFEFunction<dim,double,typename Basis::LocalFiniteElement,TargetSpace> fatherFunction(*fatherLFE, coefficients);
+ LocalGeodesicFEFunction<dim,double,typename Basis::LocalFiniteElement,TargetSpace> fatherFunction(*fatherLFE, coefficients);
- // The embedding of this element into the father geometry
- const typename GridType::template Codim<0>::LocalGeometry& geometryInFather = eIt->geometryInFather();
+ // The embedding of this element into the father geometry
+ const typename GridType::template Codim<0>::LocalGeometry& geometryInFather = eIt->geometryInFather();
- // Generate position of the Lagrange nodes
- std::vector<Dune::FieldVector<double,dim> > lagrangeNodes(lfe.localBasis().size());
+ // Generate position of the Lagrange nodes
+ std::vector<Dune::FieldVector<double,dim> > lagrangeNodes(lfe.localBasis().size());
- for (int i=0; i<dim; i++) {
- CoordinateFunction<dim> lFunction(i);
- std::vector<Dune::FieldVector<double,1> > coordinates;
- lfe.localInterpolation().interpolate(lFunction, coordinates);
+ for (int i=0; i<dim; i++) {
+ CoordinateFunction<dim> lFunction(i);
+ std::vector<Dune::FieldVector<double,1> > coordinates;
+ lfe.localInterpolation().interpolate(lFunction, coordinates);
- for (size_t j=0; j<coordinates.size(); j++)
- lagrangeNodes[j][i] = coordinates[j];
+ for (size_t j=0; j<coordinates.size(); j++)
+ lagrangeNodes[j][i] = coordinates[j];
- }
+ }
- for (int i=0; i<lfe.localCoefficients().size(); i++) {
+ for (int i=0; i<lfe.localCoefficients().size(); i++) {
- unsigned int idx = basis.index(*eIt, i);
+ unsigned int idx = basis.index(*eIt, i);
- x[idx] = fatherFunction.evaluate(geometryInFather.global(lagrangeNodes[i]));
+ x[idx] = fatherFunction.evaluate(geometryInFather.global(lagrangeNodes[i]));
- }
+ }
}
-}
+ }
};
diff --git a/dune/gfe/geometries/moebiusstrip.hh b/dune/gfe/geometries/moebiusstrip.hh
index 793c2283..5d345c9d 100644
--- a/dune/gfe/geometries/moebiusstrip.hh
+++ b/dune/gfe/geometries/moebiusstrip.hh
@@ -9,97 +9,97 @@
namespace Dune {
-/// \brief Functor representing a Möbius strip in 3D, where the base circle is the circle in the x-y-plane with radius_ around 0,0,0
-template <class T = double>
-class MoebiusStripProjection
-{
- static const int dim = 3;
- using Domain = FieldVector<T,dim>;
- using Jacobian = FieldMatrix<T,dim,dim>;
-
- T radius_;
-
-public:
- MoebiusStripProjection (T radius)
- : radius_(radius)
- {}
-
- /// \brief Project the coordinate to the MS using closest point projection
- Domain operator() (const Domain& x) const
+ /// \brief Functor representing a Möbius strip in 3D, where the base circle is the circle in the x-y-plane with radius_ around 0,0,0
+ template <class T = double>
+ class MoebiusStripProjection
{
- double nrm = std::sqrt(x[0]*x[0] + x[1]*x[1]);
- //center for the point x - it lies on the circle around (0,0,0) with radius radius_ in the x-y-plane
- Domain center{x[0] * radius_/nrm, x[1] * radius_/nrm, 0};
- double cosu = x[0]/nrm;
- double sinu = x[1]/nrm;
- double cosuhalf = std::sqrt((1+cosu)/2);
- cosuhalf *= (sinu < 0) ? (-1) : 1 ; // u goes from 0 to 2*pi, so cosuhalf is negative if sinu < 0, we multiply that here
- double sinuhalf = std::sqrt((1-cosu)/2); //u goes from 0 to 2*pi, so sinuhalf is always >= 0
-
- // now calculate line from center to the new point
- // the direction is (cosuhalf*cosu,cosuhalf*sinu,sinuhalf), as can be seen from the formula to construct the MS, we normalize this vector
- Domain centerToPointOnMS{cosuhalf*cosu,cosuhalf*sinu,sinuhalf};
- centerToPointOnMS /= centerToPointOnMS.two_norm();
-
- Domain centerToX = center - x;
- // We need the length, let theta be the angle between the vector centerToX and center to centerToPointOnMS
- // then cos(theta) = centerToX*centerToPointOnMS/(len(centerToX)*len(centerToPointOnMS))
- // We want to project the point to MS, s.t. the angle between the MS and the projection is 90deg
- // Then, length = cos(theta) * len(centerToX) = centerToX*centerToPointOnMS/len(centerToPointOnMS) = centerToX*centerToPointOnMS
- double length = - centerToX * centerToPointOnMS;
- centerToPointOnMS *= length;
- return center + centerToPointOnMS;
- }
+ static const int dim = 3;
+ using Domain = FieldVector<T,dim>;
+ using Jacobian = FieldMatrix<T,dim,dim>;
+ T radius_;
- /// \brief derivative of the projection to the MS
- friend auto derivative (const MoebiusStripProjection& moebiusStrip)
- {
- DUNE_THROW(NotImplemented,"The derivative of the projection to the Möbius strip is not implemented yet!");
- return [radius = moebiusStrip.radius_](const Domain& x)
- {
- Jacobian out;
- return out;
- };
- }
-
- /// \brief Normal Vector of the MS
- Domain normal (const Domain& x) const
- {
- using std::sqrt;
- Domain nVec = {x[0],x[1],0};
- double nrm = std::sqrt(x[0]*x[0] + x[1]*x[1]);
- double cosu = x[0]/nrm;
- double sinu = x[1]/nrm;
- double cosuhalf = std::sqrt((1+cosu)/2);
- cosuhalf *= (sinu < 0) ? (-1) : 1 ; // u goes from 0 to 2*pi, so cosuhalf is negative if sinu < 0, we multiply that here
- double sinuhalf = std::sqrt((1-cosu)/2);
- nVec[2] = (-1)*cosuhalf*(cosu*x[0]+sinu*x[1])/sinuhalf;
- nVec /= nVec.two_norm();
- return nVec;
- }
+ public:
+ MoebiusStripProjection (T radius)
+ : radius_(radius)
+ {}
- /// \brief The mean curvature of the MS
- T mean_curvature (const Domain& /*x*/) const
- {
- DUNE_THROW(NotImplemented,"The mean curvature of the Möbius strip is not implemented yet!");
- return 1;
- }
+ /// \brief Project the coordinate to the MS using closest point projection
+ Domain operator() (const Domain& x) const
+ {
+ double nrm = std::sqrt(x[0]*x[0] + x[1]*x[1]);
+ //center for the point x - it lies on the circle around (0,0,0) with radius radius_ in the x-y-plane
+ Domain center{x[0] * radius_/nrm, x[1] * radius_/nrm, 0};
+ double cosu = x[0]/nrm;
+ double sinu = x[1]/nrm;
+ double cosuhalf = std::sqrt((1+cosu)/2);
+ cosuhalf *= (sinu < 0) ? (-1) : 1 ; // u goes from 0 to 2*pi, so cosuhalf is negative if sinu < 0, we multiply that here
+ double sinuhalf = std::sqrt((1-cosu)/2); //u goes from 0 to 2*pi, so sinuhalf is always >= 0
+
+ // now calculate line from center to the new point
+ // the direction is (cosuhalf*cosu,cosuhalf*sinu,sinuhalf), as can be seen from the formula to construct the MS, we normalize this vector
+ Domain centerToPointOnMS{cosuhalf*cosu,cosuhalf*sinu,sinuhalf};
+ centerToPointOnMS /= centerToPointOnMS.two_norm();
+
+ Domain centerToX = center - x;
+ // We need the length, let theta be the angle between the vector centerToX and center to centerToPointOnMS
+ // then cos(theta) = centerToX*centerToPointOnMS/(len(centerToX)*len(centerToPointOnMS))
+ // We want to project the point to MS, s.t. the angle between the MS and the projection is 90deg
+ // Then, length = cos(theta) * len(centerToX) = centerToX*centerToPointOnMS/len(centerToPointOnMS) = centerToX*centerToPointOnMS
+ double length = - centerToX * centerToPointOnMS;
+ centerToPointOnMS *= length;
+ return center + centerToPointOnMS;
+ }
+
+
+ /// \brief derivative of the projection to the MS
+ friend auto derivative (const MoebiusStripProjection& moebiusStrip)
+ {
+ DUNE_THROW(NotImplemented,"The derivative of the projection to the Möbius strip is not implemented yet!");
+ return [radius = moebiusStrip.radius_](const Domain& x)
+ {
+ Jacobian out;
+ return out;
+ };
+ }
+
+ /// \brief Normal Vector of the MS
+ Domain normal (const Domain& x) const
+ {
+ using std::sqrt;
+ Domain nVec = {x[0],x[1],0};
+ double nrm = std::sqrt(x[0]*x[0] + x[1]*x[1]);
+ double cosu = x[0]/nrm;
+ double sinu = x[1]/nrm;
+ double cosuhalf = std::sqrt((1+cosu)/2);
+ cosuhalf *= (sinu < 0) ? (-1) : 1 ; // u goes from 0 to 2*pi, so cosuhalf is negative if sinu < 0, we multiply that here
+ double sinuhalf = std::sqrt((1-cosu)/2);
+ nVec[2] = (-1)*cosuhalf*(cosu*x[0]+sinu*x[1])/sinuhalf;
+ nVec /= nVec.two_norm();
+ return nVec;
+ }
+
+ /// \brief The mean curvature of the MS
+ T mean_curvature (const Domain& /*x*/) const
+ {
+ DUNE_THROW(NotImplemented,"The mean curvature of the Möbius strip is not implemented yet!");
+ return 1;
+ }
- /// \brief The area of the MS
- T area () const
+ /// \brief The area of the MS
+ T area () const
+ {
+ DUNE_THROW(NotImplemented,"The area of the Möbius strip is not implemented yet!");
+ return 1;
+ }
+ };
+
+ /// \brief construct a grid function representing the parametrization of a MS
+ template <class Grid, class T>
+ auto moebiusStripGridFunction (T radius)
{
- DUNE_THROW(NotImplemented,"The area of the Möbius strip is not implemented yet!");
- return 1;
+ return analyticGridFunction<Grid>(MoebiusStripProjection<T>{radius});
}
-};
-
-/// \brief construct a grid function representing the parametrization of a MS
-template <class Grid, class T>
-auto moebiusStripGridFunction (T radius)
-{
- return analyticGridFunction<Grid>(MoebiusStripProjection<T>{radius});
-}
} // end namespace Dune
diff --git a/dune/gfe/geometries/twistedstrip.hh b/dune/gfe/geometries/twistedstrip.hh
index d7af4843..9d502aeb 100644
--- a/dune/gfe/geometries/twistedstrip.hh
+++ b/dune/gfe/geometries/twistedstrip.hh
@@ -9,95 +9,95 @@
namespace Dune {
-/// \brief Functor representing a twisted strip in 3D, with length length_ and nTwists twists
-template <class T = double>
-class TwistedStripProjection
-{
- static const int dim = 3;
- using Domain = FieldVector<T,dim>;
- using Jacobian = FieldMatrix<T,dim,dim>;
+ /// \brief Functor representing a twisted strip in 3D, with length length_ and nTwists twists
+ template <class T = double>
+ class TwistedStripProjection
+ {
+ static const int dim = 3;
+ using Domain = FieldVector<T,dim>;
+ using Jacobian = FieldMatrix<T,dim,dim>;
- T length_;
- double nTwists_;
+ T length_;
+ double nTwists_;
-public:
- TwistedStripProjection (T length, double nTwists)
- : length_(length),
+ public:
+ TwistedStripProjection (T length, double nTwists)
+ : length_(length),
nTwists_(nTwists)
- {}
+ {}
- /// \brief Project the coordinate to the twisted strip using closest point projection
- Domain operator() (const Domain& x) const
- {
- // Angle for the x - position of the point
- double alpha = std::acos(-1)*nTwists_*x[0]/length_;
- double cosalpha = std::cos(alpha);
- double sinalpha = std::sin(alpha);
+ /// \brief Project the coordinate to the twisted strip using closest point projection
+ Domain operator() (const Domain& x) const
+ {
+ // Angle for the x - position of the point
+ double alpha = std::acos(-1)*nTwists_*x[0]/length_;
+ double cosalpha = std::cos(alpha);
+ double sinalpha = std::sin(alpha);
- // Add the line from middle to the new point - the direction is (0,cosalpha,sinalpha)
- // We need the distance, calculated by (y^2 + z^2)^0.5
- double dist = std::sqrt(x[1]*x[1] + x[2]*x[2]);
- double y = std::abs(cosalpha*dist);
- if (x[1] < 0 and std::abs(x[1]) > std::abs(x[2])) { // only trust the sign of x[1] if it is larger than x[2]
- y *= (-1);
- } else if (std::abs(x[1]) <= std::abs(x[2])) {
- if (cosalpha * sinalpha >= 0 and x[2] < 0) // if cosalpha*sinalpha > 0, x[1] and x[2] must have the same sign
+ // Add the line from middle to the new point - the direction is (0,cosalpha,sinalpha)
+ // We need the distance, calculated by (y^2 + z^2)^0.5
+ double dist = std::sqrt(x[1]*x[1] + x[2]*x[2]);
+ double y = std::abs(cosalpha*dist);
+ if (x[1] < 0 and std::abs(x[1]) > std::abs(x[2])) { // only trust the sign of x[1] if it is larger than x[2]
y *= (-1);
- if (cosalpha * sinalpha <= 0 and x[2] > 0) // if cosalpha*sinalpha < 0, x[1] and x[2] must have opposite signs
- y *= (-1);
- }
- double z = std::abs(sinalpha*dist);
- if (x[2] < 0 and std::abs(x[2]) > std::abs(x[1])) {
- z *= (-1);
- } else if (std::abs(x[2]) <= std::abs(x[1])) {
- if (cosalpha * sinalpha >= 0 and x[1] < 0)
- z *= (-1);
- if (cosalpha * sinalpha <= 0 and x[1] > 0)
+ } else if (std::abs(x[1]) <= std::abs(x[2])) {
+ if (cosalpha * sinalpha >= 0 and x[2] < 0) // if cosalpha*sinalpha > 0, x[1] and x[2] must have the same sign
+ y *= (-1);
+ if (cosalpha * sinalpha <= 0 and x[2] > 0) // if cosalpha*sinalpha < 0, x[1] and x[2] must have opposite signs
+ y *= (-1);
+ }
+ double z = std::abs(sinalpha*dist);
+ if (x[2] < 0 and std::abs(x[2]) > std::abs(x[1])) {
z *= (-1);
+ } else if (std::abs(x[2]) <= std::abs(x[1])) {
+ if (cosalpha * sinalpha >= 0 and x[1] < 0)
+ z *= (-1);
+ if (cosalpha * sinalpha <= 0 and x[1] > 0)
+ z *= (-1);
+ }
+ return {x[0], y , z};
}
- return {x[0], y , z};
- }
- /// \brief derivative of the projection to the twistedstrip
- friend auto derivative (const TwistedStripProjection& twistedStrip)
- {
- DUNE_THROW(NotImplemented,"The derivative of the projection to the twisted strip is not implemented yet!");
- return [length = twistedStrip.length_, nTwists = twistedStrip.nTwists_](const Domain& x)
+ /// \brief derivative of the projection to the twistedstrip
+ friend auto derivative (const TwistedStripProjection& twistedStrip)
{
- Jacobian out;
- return out;
- };
- }
+ DUNE_THROW(NotImplemented,"The derivative of the projection to the twisted strip is not implemented yet!");
+ return [length = twistedStrip.length_, nTwists = twistedStrip.nTwists_](const Domain& x)
+ {
+ Jacobian out;
+ return out;
+ };
+ }
- /// \brief Normal Vector of the twisted strip
- Domain normal (const Domain& x) const
- {
- // Angle for the x - position of the point
- double alpha = std::acos(-1)*nTwists_*x[0]/length_;
- std::cout << "normal at " << x[0] << "is " << -std::sin(alpha) << ", " << std::cos(alpha) << std::endl;
- return {0,-std::sin(alpha), std::cos(alpha)};
- }
+ /// \brief Normal Vector of the twisted strip
+ Domain normal (const Domain& x) const
+ {
+ // Angle for the x - position of the point
+ double alpha = std::acos(-1)*nTwists_*x[0]/length_;
+ std::cout << "normal at " << x[0] << "is " << -std::sin(alpha) << ", " << std::cos(alpha) << std::endl;
+ return {0,-std::sin(alpha), std::cos(alpha)};
+ }
- /// \brief The mean curvature of the twisted strip
- T mean_curvature (const Domain& /*x*/) const
- {
- DUNE_THROW(NotImplemented,"The mean curvature of the twisted strip is not implemented yet!");
- return 1;
- }
+ /// \brief The mean curvature of the twisted strip
+ T mean_curvature (const Domain& /*x*/) const
+ {
+ DUNE_THROW(NotImplemented,"The mean curvature of the twisted strip is not implemented yet!");
+ return 1;
+ }
- /// \brief The area of the twisted strip
- T area (T width) const
+ /// \brief The area of the twisted strip
+ T area (T width) const
+ {
+ return length_*width;
+ }
+ };
+
+ /// \brief construct a grid function representing the parametrization of a twisted strip
+ template <class Grid, class T>
+ auto twistedStripGridFunction (T length, double nTwists)
{
- return length_*width;
+ return analyticGridFunction<Grid>(TwistedStripProjection<T>{length, nTwists});
}
-};
-
-/// \brief construct a grid function representing the parametrization of a twisted strip
-template <class Grid, class T>
-auto twistedStripGridFunction (T length, double nTwists)
-{
- return analyticGridFunction<Grid>(TwistedStripProjection<T>{length, nTwists});
-}
} // end namespace Dune
diff --git a/dune/gfe/gfedifferencenormsquared.hh b/dune/gfe/gfedifferencenormsquared.hh
index a6b53e61..a6d15123 100644
--- a/dune/gfe/gfedifferencenormsquared.hh
+++ b/dune/gfe/gfedifferencenormsquared.hh
@@ -4,7 +4,7 @@
/** \file
\brief Helper method which computes the energy norm (squared) of the difference of
the fe functions on two different refinements of the same base grid.
-*/
+ */
#include <dune/geometry/type.hh>
#include <dune/common/fvector.hh>
@@ -18,271 +18,271 @@
template <class Basis, class TargetSpace>
class GFEDifferenceNormSquared {
- typedef typename Basis::GridView GridView;
- typedef typename Basis::GridView::Grid GridType;
-
- // Grid dimension
- const static int dim = GridType::dimension;
-
- /** \brief Check whether given local coordinates are contained in the reference element
- \todo This method exists in the Dune grid interface! But we need the eps.
- */
- static bool checkInside(const Dune::GeometryType& type,
- const Dune::FieldVector<double, dim> &loc,
- double eps)
- {
- switch (type.dim()) {
-
- case 0: // vertex
- return false;
- case 1: // line
- return -eps <= loc[0] && loc[0] <= 1+eps;
- case 2:
-
- if (type.isSimplex()) {
- return -eps <= loc[0] && -eps <= loc[1] && (loc[0]+loc[1])<=1+eps;
- } else if (type.isCube()) {
- return -eps <= loc[0] && loc[0] <= 1+eps
- && -eps <= loc[1] && loc[1] <= 1+eps;
- } else {
- DUNE_THROW(Dune::GridError, "checkInside(): ERROR: Unknown type " << type << " found!");
- }
-
- case 3:
- if (type.isSimplex()) {
- return -eps <= loc[0] && -eps <= loc[1] && -eps <= loc[2]
- && (loc[0]+loc[1]+loc[2]) <= 1+eps;
- } else if (type.isPyramid()) {
- return -eps <= loc[0] && -eps <= loc[1] && -eps <= loc[2]
- && (loc[0]+loc[2]) <= 1+eps
- && (loc[1]+loc[2]) <= 1+eps;
- } else if (type.isPrism()) {
- return -eps <= loc[0] && -eps <= loc[1]
- && (loc[0]+loc[1])<= 1+eps
- && -eps <= loc[2] && loc[2] <= 1+eps;
- } else if (type.isCube()) {
- return -eps <= loc[0] && loc[0] <= 1+eps
- && -eps <= loc[1] && loc[1] <= 1+eps
- && -eps <= loc[2] && loc[2] <= 1+eps;
- }else {
- DUNE_THROW(Dune::GridError, "checkInside(): ERROR: Unknown type " << type << " found!");
- }
- default:
- DUNE_THROW(Dune::GridError, "checkInside(): ERROR: Unknown type " << type << " found!");
- }
-
+ typedef typename Basis::GridView GridView;
+ typedef typename Basis::GridView::Grid GridType;
+
+ // Grid dimension
+ const static int dim = GridType::dimension;
+
+ /** \brief Check whether given local coordinates are contained in the reference element
+ \todo This method exists in the Dune grid interface! But we need the eps.
+ */
+ static bool checkInside(const Dune::GeometryType& type,
+ const Dune::FieldVector<double, dim> &loc,
+ double eps)
+ {
+ switch (type.dim()) {
+
+ case 0 : // vertex
+ return false;
+ case 1 : // line
+ return -eps <= loc[0] && loc[0] <= 1+eps;
+ case 2 :
+
+ if (type.isSimplex()) {
+ return -eps <= loc[0] && -eps <= loc[1] && (loc[0]+loc[1])<=1+eps;
+ } else if (type.isCube()) {
+ return -eps <= loc[0] && loc[0] <= 1+eps
+ && -eps <= loc[1] && loc[1] <= 1+eps;
+ } else {
+ DUNE_THROW(Dune::GridError, "checkInside(): ERROR: Unknown type " << type << " found!");
+ }
+
+ case 3 :
+ if (type.isSimplex()) {
+ return -eps <= loc[0] && -eps <= loc[1] && -eps <= loc[2]
+ && (loc[0]+loc[1]+loc[2]) <= 1+eps;
+ } else if (type.isPyramid()) {
+ return -eps <= loc[0] && -eps <= loc[1] && -eps <= loc[2]
+ && (loc[0]+loc[2]) <= 1+eps
+ && (loc[1]+loc[2]) <= 1+eps;
+ } else if (type.isPrism()) {
+ return -eps <= loc[0] && -eps <= loc[1]
+ && (loc[0]+loc[1])<= 1+eps
+ && -eps <= loc[2] && loc[2] <= 1+eps;
+ } else if (type.isCube()) {
+ return -eps <= loc[0] && loc[0] <= 1+eps
+ && -eps <= loc[1] && loc[1] <= 1+eps
+ && -eps <= loc[2] && loc[2] <= 1+eps;
+ }else {
+ DUNE_THROW(Dune::GridError, "checkInside(): ERROR: Unknown type " << type << " found!");
+ }
+ default :
+ DUNE_THROW(Dune::GridError, "checkInside(): ERROR: Unknown type " << type << " found!");
}
-
-
- /** \brief Coordinate function in one variable, constant in the others
-
- This is used to extract the positions of the Lagrange nodes.
- */
- struct CoordinateFunction
- : public Dune::VirtualFunction<Dune::FieldVector<double,dim>, Dune::FieldVector<double,1> >
- {
- CoordinateFunction(int d)
- : d_(d)
- {}
-
- void evaluate(const Dune::FieldVector<double, dim>& x, Dune::FieldVector<double,1>& out) const {
- out[0] = x[d_];
- }
- //
- int d_;
- };
+ }
+
+
+ /** \brief Coordinate function in one variable, constant in the others
+
+ This is used to extract the positions of the Lagrange nodes.
+ */
+ struct CoordinateFunction
+ : public Dune::VirtualFunction<Dune::FieldVector<double,dim>, Dune::FieldVector<double,1> >
+ {
+ CoordinateFunction(int d)
+ : d_(d)
+ {}
+
+ void evaluate(const Dune::FieldVector<double, dim>& x, Dune::FieldVector<double,1>& out) const {
+ out[0] = x[d_];
+ }
+
+ //
+ int d_;
+ };
public:
- static void interpolate(const GridType& sourceGrid,
- const std::vector<TargetSpace>& source,
- const GridType& targetGrid,
- std::vector<TargetSpace>& target)
- {
- // Create a leaf function, which we need to be able to call 'evalall()'
- Basis sourceBasis(sourceGrid.leafGridView());
- GlobalGeodesicFEFunction<Basis,TargetSpace> sourceFunction(sourceBasis, source);
-
- Basis targetBasis(targetGrid.leafGridView());
-
- // ///////////////////////////////////////////////////////////////////////////////////////////
- // Prolong the adaptive solution onto the uniform grid in order to make it comparable
- // ///////////////////////////////////////////////////////////////////////////////////////////
-
- target.resize(targetBasis.size());
-
- // handle each dof only once
- Dune::BitSetVector<1> handled(targetBasis.size(), false);
-
- typename GridView::template Codim<0>::Iterator eIt = targetGrid.template leafbegin<0>();
- typename GridView::template Codim<0>::Iterator eEndIt = targetGrid.template leafend<0>();
-
- // Loop over all dofs by looping over all elements
- for (; eIt!=eEndIt; ++eIt) {
-
- const typename Basis::LocalFiniteElement& targetLFE = targetBasis.getLocalFiniteElement(*eIt);
-
- // Generate position of the Lagrange nodes
- std::vector<Dune::FieldVector<double,dim> > lagrangeNodes(targetLFE.localBasis().size());
-
- for (int i=0; i<dim; i++) {
- CoordinateFunction lFunction(i);
- std::vector<Dune::FieldVector<double,1> > coordinates;
- targetLFE.localInterpolation().interpolate(lFunction, coordinates);
-
- for (size_t j=0; j<coordinates.size(); j++)
- lagrangeNodes[j][i] = coordinates[j];
-
- }
-
- for (size_t i=0; i<targetLFE.localCoefficients().size(); i++) {
-
- typename GridType::template Codim<0>::EntityPointer element(eIt);
-
- Dune::FieldVector<double,dim> pos = lagrangeNodes[i];
-
- if (handled[targetBasis.index(*eIt,i)][0])
- continue;
-
- handled[targetBasis.index(*eIt,i)] = true;
-
- assert(checkInside(element->type(), pos, 1e-7));
-
- // ////////////////////////////////////////////////////////////////////
- // Get an element on the coarsest grid which contains the vertex and
- // its local coordinates there
- // ////////////////////////////////////////////////////////////////////
- while (element->level() != 0){
-
- pos = element->geometryInFather().global(pos);
- element = element->father();
-
- assert(checkInside(element->type(), pos, 1e-7));
- }
-
- // ////////////////////////////////////////////////////////////////////
- // Find the corresponding coarse grid element on the adaptive grid.
- // This is a linear algorithm, but we expect the coarse grid to be small.
- // ////////////////////////////////////////////////////////////////////
- Dune::LevelMultipleCodimMultipleGeomTypeMapper<GridType,Dune::MCMGElementLayout> uniformP0Mapper (targetGrid, 0);
- Dune::LevelMultipleCodimMultipleGeomTypeMapper<GridType,Dune::MCMGElementLayout> adaptiveP0Mapper(sourceGrid, 0);
- int coarseIndex = uniformP0Mapper.map(*element);
-
- typename GridType::template Codim<0>::LevelIterator adaptEIt = sourceGrid.template lbegin<0>(0);
- typename GridType::template Codim<0>::LevelIterator adaptEEndIt = sourceGrid.template lend<0>(0);
-
- for (; adaptEIt!=adaptEEndIt; ++adaptEIt)
- if (adaptiveP0Mapper.map(*adaptEIt) == coarseIndex)
- break;
-
- element = adaptEIt;
-
- // ////////////////////////////////////////////////////////////////////////
- // Find a corresponding point (not necessarily vertex) on the leaf level
- // of the adaptive grid.
- // ////////////////////////////////////////////////////////////////////////
-
- while (!element->isLeaf()) {
-
-
- typename GridType::template Codim<0>::Entity::HierarchicIterator hIt = element->hbegin(element->level()+1);
- typename GridType::template Codim<0>::Entity::HierarchicIterator hEndIt = element->hend(element->level()+1);
-
- Dune::FieldVector<double,dim> childPos;
- assert(checkInside(element->type(), pos, 1e-7));
-
- for (; hIt!=hEndIt; ++hIt) {
-
- childPos = hIt->geometryInFather().local(pos);
- if (checkInside(hIt->type(), childPos, 1e-7))
- break;
-
- }
-
- assert(hIt!=hEndIt);
- element = hIt;
- pos = childPos;
-
- }
-
- // ////////////////////////////////////////////////////////////////////////
- // Sample adaptive function
- // ////////////////////////////////////////////////////////////////////////
- sourceFunction.evaluateLocal(*element, pos,
- target[targetBasis.index(*eIt,i)]);
-
- }
-
+ static void interpolate(const GridType& sourceGrid,
+ const std::vector<TargetSpace>& source,
+ const GridType& targetGrid,
+ std::vector<TargetSpace>& target)
+ {
+ // Create a leaf function, which we need to be able to call 'evalall()'
+ Basis sourceBasis(sourceGrid.leafGridView());
+ GlobalGeodesicFEFunction<Basis,TargetSpace> sourceFunction(sourceBasis, source);
+
+ Basis targetBasis(targetGrid.leafGridView());
+
+ // ///////////////////////////////////////////////////////////////////////////////////////////
+ // Prolong the adaptive solution onto the uniform grid in order to make it comparable
+ // ///////////////////////////////////////////////////////////////////////////////////////////
+
+ target.resize(targetBasis.size());
+
+ // handle each dof only once
+ Dune::BitSetVector<1> handled(targetBasis.size(), false);
+
+ typename GridView::template Codim<0>::Iterator eIt = targetGrid.template leafbegin<0>();
+ typename GridView::template Codim<0>::Iterator eEndIt = targetGrid.template leafend<0>();
+
+ // Loop over all dofs by looping over all elements
+ for (; eIt!=eEndIt; ++eIt) {
+
+ const typename Basis::LocalFiniteElement& targetLFE = targetBasis.getLocalFiniteElement(*eIt);
+
+ // Generate position of the Lagrange nodes
+ std::vector<Dune::FieldVector<double,dim> > lagrangeNodes(targetLFE.localBasis().size());
+
+ for (int i=0; i<dim; i++) {
+ CoordinateFunction lFunction(i);
+ std::vector<Dune::FieldVector<double,1> > coordinates;
+ targetLFE.localInterpolation().interpolate(lFunction, coordinates);
+
+ for (size_t j=0; j<coordinates.size(); j++)
+ lagrangeNodes[j][i] = coordinates[j];
+
+ }
+
+ for (size_t i=0; i<targetLFE.localCoefficients().size(); i++) {
+
+ typename GridType::template Codim<0>::EntityPointer element(eIt);
+
+ Dune::FieldVector<double,dim> pos = lagrangeNodes[i];
+
+ if (handled[targetBasis.index(*eIt,i)][0])
+ continue;
+
+ handled[targetBasis.index(*eIt,i)] = true;
+
+ assert(checkInside(element->type(), pos, 1e-7));
+
+ // ////////////////////////////////////////////////////////////////////
+ // Get an element on the coarsest grid which contains the vertex and
+ // its local coordinates there
+ // ////////////////////////////////////////////////////////////////////
+ while (element->level() != 0) {
+
+ pos = element->geometryInFather().global(pos);
+ element = element->father();
+
+ assert(checkInside(element->type(), pos, 1e-7));
}
-
- }
+ // ////////////////////////////////////////////////////////////////////
+ // Find the corresponding coarse grid element on the adaptive grid.
+ // This is a linear algorithm, but we expect the coarse grid to be small.
+ // ////////////////////////////////////////////////////////////////////
+ Dune::LevelMultipleCodimMultipleGeomTypeMapper<GridType,Dune::MCMGElementLayout> uniformP0Mapper (targetGrid, 0);
+ Dune::LevelMultipleCodimMultipleGeomTypeMapper<GridType,Dune::MCMGElementLayout> adaptiveP0Mapper(sourceGrid, 0);
+ int coarseIndex = uniformP0Mapper.map(*element);
+
+ typename GridType::template Codim<0>::LevelIterator adaptEIt = sourceGrid.template lbegin<0>(0);
+ typename GridType::template Codim<0>::LevelIterator adaptEEndIt = sourceGrid.template lend<0>(0);
+
+ for (; adaptEIt!=adaptEEndIt; ++adaptEIt)
+ if (adaptiveP0Mapper.map(*adaptEIt) == coarseIndex)
+ break;
+
+ element = adaptEIt;
+
+ // ////////////////////////////////////////////////////////////////////////
+ // Find a corresponding point (not necessarily vertex) on the leaf level
+ // of the adaptive grid.
+ // ////////////////////////////////////////////////////////////////////////
+
+ while (!element->isLeaf()) {
+
+
+ typename GridType::template Codim<0>::Entity::HierarchicIterator hIt = element->hbegin(element->level()+1);
+ typename GridType::template Codim<0>::Entity::HierarchicIterator hEndIt = element->hend(element->level()+1);
+
+ Dune::FieldVector<double,dim> childPos;
+ assert(checkInside(element->type(), pos, 1e-7));
+
+ for (; hIt!=hEndIt; ++hIt) {
+
+ childPos = hIt->geometryInFather().local(pos);
+ if (checkInside(hIt->type(), childPos, 1e-7))
+ break;
+
+ }
+
+ assert(hIt!=hEndIt);
+ element = hIt;
+ pos = childPos;
- template <int blocksize>
- static double computeNormSquared(const GridType& grid,
- const Dune::BlockVector<Dune::FieldVector<double,blocksize> >& x,
- const LocalOperatorAssembler<GridType,
- typename Basis::LocalFiniteElement,
- typename Basis::LocalFiniteElement,
- Dune::FieldMatrix<double,1,1> >* localStiffness)
- {
- // ///////////////////////////////////////////////////////////////////////////////////////////
- // Compute the energy norm
- // ///////////////////////////////////////////////////////////////////////////////////////////
-
- double energyNormSquared = 0;
- Basis basis(grid.leafGridView());
- Dune::Matrix<Dune::FieldMatrix<double,1,1> > localMatrix;
-
- typename GridType::template Codim<0>::LeafIterator eIt = grid.template leafbegin<0>();
- typename GridType::template Codim<0>::LeafIterator eEndIt = grid.template leafend<0>();
-
- for (; eIt!=eEndIt; ++eIt) {
-
- size_t nLocalDofs = basis.getLocalFiniteElement(*eIt).localCoefficients().size();
-
- localMatrix.setSize(nLocalDofs,nLocalDofs);
-
- localStiffness->assemble(*eIt, localMatrix,
- basis.getLocalFiniteElement(*eIt),
- basis.getLocalFiniteElement(*eIt));
-
- for (size_t i=0; i<nLocalDofs; i++)
- for (size_t j=0; j<nLocalDofs; j++)
- energyNormSquared += localMatrix[i][j][0][0] * (x[basis.index(*eIt,i)] * x[basis.index(*eIt,j)]);
-
}
-
- return energyNormSquared;
+
+ // ////////////////////////////////////////////////////////////////////////
+ // Sample adaptive function
+ // ////////////////////////////////////////////////////////////////////////
+ sourceFunction.evaluateLocal(*element, pos,
+ target[targetBasis.index(*eIt,i)]);
+
+ }
+
}
- static double compute(const GridType& uniformGrid,
- const std::vector<TargetSpace>& uniformSolution,
- const GridType& adaptiveGrid,
- const std::vector<TargetSpace>& adaptiveSolution,
- const LocalOperatorAssembler<GridType,
- typename Basis::LocalFiniteElement,
- typename Basis::LocalFiniteElement,
- Dune::FieldMatrix<double,1,1> >* localStiffness)
- {
- std::vector<TargetSpace> uniformAdaptiveSolution;
-
- interpolate(adaptiveGrid, adaptiveSolution, uniformGrid, uniformAdaptiveSolution);
-
- // Compute difference in the embedding space
- Dune::BlockVector<typename TargetSpace::CoordinateType> difference(uniformSolution.size());
-
- for (size_t i=0; i<difference.size(); i++)
- difference[i] = uniformAdaptiveSolution[i].globalCoordinates() - uniformSolution[i].globalCoordinates();
-
- //std::cout << "new difference:\n" << difference << std::endl;
-// std::cout << "new projected:\n" << std::endl;
-// for (size_t i=0; i<difference.size(); i++)
-// std::cout << uniformAdaptiveSolution[i].globalCoordinates() << std::endl;
-
- return computeNormSquared(uniformGrid, difference, localStiffness);
+ }
+
+
+ template <int blocksize>
+ static double computeNormSquared(const GridType& grid,
+ const Dune::BlockVector<Dune::FieldVector<double,blocksize> >& x,
+ const LocalOperatorAssembler<GridType,
+ typename Basis::LocalFiniteElement,
+ typename Basis::LocalFiniteElement,
+ Dune::FieldMatrix<double,1,1> >* localStiffness)
+ {
+ // ///////////////////////////////////////////////////////////////////////////////////////////
+ // Compute the energy norm
+ // ///////////////////////////////////////////////////////////////////////////////////////////
+
+ double energyNormSquared = 0;
+ Basis basis(grid.leafGridView());
+ Dune::Matrix<Dune::FieldMatrix<double,1,1> > localMatrix;
+
+ typename GridType::template Codim<0>::LeafIterator eIt = grid.template leafbegin<0>();
+ typename GridType::template Codim<0>::LeafIterator eEndIt = grid.template leafend<0>();
+
+ for (; eIt!=eEndIt; ++eIt) {
+
+ size_t nLocalDofs = basis.getLocalFiniteElement(*eIt).localCoefficients().size();
+
+ localMatrix.setSize(nLocalDofs,nLocalDofs);
+
+ localStiffness->assemble(*eIt, localMatrix,
+ basis.getLocalFiniteElement(*eIt),
+ basis.getLocalFiniteElement(*eIt));
+
+ for (size_t i=0; i<nLocalDofs; i++)
+ for (size_t j=0; j<nLocalDofs; j++)
+ energyNormSquared += localMatrix[i][j][0][0] * (x[basis.index(*eIt,i)] * x[basis.index(*eIt,j)]);
+
}
+
+ return energyNormSquared;
+ }
+
+ static double compute(const GridType& uniformGrid,
+ const std::vector<TargetSpace>& uniformSolution,
+ const GridType& adaptiveGrid,
+ const std::vector<TargetSpace>& adaptiveSolution,
+ const LocalOperatorAssembler<GridType,
+ typename Basis::LocalFiniteElement,
+ typename Basis::LocalFiniteElement,
+ Dune::FieldMatrix<double,1,1> >* localStiffness)
+ {
+ std::vector<TargetSpace> uniformAdaptiveSolution;
+
+ interpolate(adaptiveGrid, adaptiveSolution, uniformGrid, uniformAdaptiveSolution);
+
+ // Compute difference in the embedding space
+ Dune::BlockVector<typename TargetSpace::CoordinateType> difference(uniformSolution.size());
+
+ for (size_t i=0; i<difference.size(); i++)
+ difference[i] = uniformAdaptiveSolution[i].globalCoordinates() - uniformSolution[i].globalCoordinates();
+
+ //std::cout << "new difference:\n" << difference << std::endl;
+ // std::cout << "new projected:\n" << std::endl;
+ // for (size_t i=0; i<difference.size(); i++)
+ // std::cout << uniformAdaptiveSolution[i].globalCoordinates() << std::endl;
+
+ return computeNormSquared(uniformGrid, difference, localStiffness);
+ }
};
#endif
diff --git a/dune/gfe/globalgfefunction.hh b/dune/gfe/globalgfefunction.hh
index 9cc1f814..cc219ca0 100644
--- a/dune/gfe/globalgfefunction.hh
+++ b/dune/gfe/globalgfefunction.hh
@@ -22,525 +22,525 @@
namespace Dune::GFE {
-namespace Impl {
+ namespace Impl {
#if DUNE_VERSION_LTE(DUNE_FUFEM, 2, 9)
- // This collects all data that is shared by all related
- // global and local functions.
- template <typename Basis, typename Vector>
- struct Data
- {
- using GridView = typename Basis::GridView;
- using EntitySet = Functions::GridViewEntitySet<GridView, 0>;
- EntitySet entitySet;
- std::shared_ptr<const Basis> basis;
- std::shared_ptr<const Vector> coefficients;
- };
+ // This collects all data that is shared by all related
+ // global and local functions.
+ template <typename Basis, typename Vector>
+ struct Data
+ {
+ using GridView = typename Basis::GridView;
+ using EntitySet = Functions::GridViewEntitySet<GridView, 0>;
+ EntitySet entitySet;
+ std::shared_ptr<const Basis> basis;
+ std::shared_ptr<const Vector> coefficients;
+ };
#endif
-/** \brief Common base class for GlobalGFEFunction and its derivative
- *
- * \tparam B Scalar(!) function-space basis
- * \tparam V Container of coefficients
- * \tparam LocalInterpolationRule How to interpolate manifold-valued data
- */
+ /** \brief Common base class for GlobalGFEFunction and its derivative
+ *
+ * \tparam B Scalar(!) function-space basis
+ * \tparam V Container of coefficients
+ * \tparam LocalInterpolationRule How to interpolate manifold-valued data
+ */
#if DUNE_VERSION_LTE(DUNE_FUFEM, 2, 9)
-template<typename B, typename V, typename LocalInterpolationRule, typename Range>
-class GlobalGFEFunctionBase
-: public VirtualGridViewFunction<typename B::GridView, Range>
+ template<typename B, typename V, typename LocalInterpolationRule, typename Range>
+ class GlobalGFEFunctionBase
+ : public VirtualGridViewFunction<typename B::GridView, Range>
#else
-template<typename B, typename V, typename LocalInterpolationRule>
-class GlobalGFEFunctionBase
+ template<typename B, typename V, typename LocalInterpolationRule>
+ class GlobalGFEFunctionBase
#endif
-{
-public:
- using Basis = B;
- using Vector = V;
+ {
+ public:
+ using Basis = B;
+ using Vector = V;
- // In order to make the cache work for proxy-references
- // we have to use AutonomousValue<T> instead of std::decay_t<T>
- using Coefficient = Dune::AutonomousValue<decltype(std::declval<Vector>()[std::declval<typename Basis::MultiIndex>()])>;
+ // In order to make the cache work for proxy-references
+ // we have to use AutonomousValue<T> instead of std::decay_t<T>
+ using Coefficient = Dune::AutonomousValue<decltype(std::declval<Vector>()[std::declval<typename Basis::MultiIndex>()])>;
- using GridView = typename Basis::GridView;
- using EntitySet = Functions::GridViewEntitySet<GridView, 0>;
- using Tree = typename Basis::LocalView::Tree;
+ using GridView = typename Basis::GridView;
+ using EntitySet = Functions::GridViewEntitySet<GridView, 0>;
+ using Tree = typename Basis::LocalView::Tree;
- using Domain = typename EntitySet::GlobalCoordinate;
+ using Domain = typename EntitySet::GlobalCoordinate;
- using LocalDomain = typename EntitySet::LocalCoordinate;
- using Element = typename EntitySet::Element;
+ using LocalDomain = typename EntitySet::LocalCoordinate;
+ using Element = typename EntitySet::Element;
-protected:
+ protected:
#if DUNE_VERSION_GT(DUNE_FUFEM, 2, 9)
- // This collects all data that is shared by all related
- // global and local functions. This way we don't need to
- // keep track of it individually.
- struct Data
- {
- EntitySet entitySet;
- std::shared_ptr<const Basis> basis;
- std::shared_ptr<const Vector> coefficients;
- };
+ // This collects all data that is shared by all related
+ // global and local functions. This way we don't need to
+ // keep track of it individually.
+ struct Data
+ {
+ EntitySet entitySet;
+ std::shared_ptr<const Basis> basis;
+ std::shared_ptr<const Vector> coefficients;
+ };
#endif
-public:
- class LocalFunctionBase
- {
- using LocalView = typename Basis::LocalView;
- using size_type = typename Tree::size_type;
+ public:
+ class LocalFunctionBase
+ {
+ using LocalView = typename Basis::LocalView;
+ using size_type = typename Tree::size_type;
- public:
- using Domain = LocalDomain;
- using Element = typename EntitySet::Element;
+ public:
+ using Domain = LocalDomain;
+ using Element = typename EntitySet::Element;
- protected:
+ protected:
#if DUNE_VERSION_LTE(DUNE_FUFEM, 2, 9)
- LocalFunctionBase(const std::shared_ptr<const Data<Basis,Vector>>& data)
+ LocalFunctionBase(const std::shared_ptr<const Data<Basis,Vector> >& data)
#else
- LocalFunctionBase(const std::shared_ptr<const Data>& data)
+ LocalFunctionBase(const std::shared_ptr<const Data>& data)
#endif
- : data_(data)
- , localView_(data_->basis->localView())
- {
- localDoFs_.reserve(localView_.maxSize());
- }
-
- /**
- * \brief Copy-construct the local-function.
- *
- * This copy-constructor copies the cached local DOFs only
- * if the `other` local-function is bound to an element.
- **/
- LocalFunctionBase(const LocalFunctionBase& other)
- : data_(other.data_)
- , localView_(other.localView_)
- {
- localDoFs_.reserve(localView_.maxSize());
- if (bound())
- localDoFs_ = other.localDoFs_;
- }
-
- /**
- * \brief Copy-assignment of the local-function.
- *
- * Assign all members from `other` to `this`, except the
- * local DOFs. Those are copied only if the `other`
- * local-function is bound to an element.
- **/
- LocalFunctionBase& operator=(const LocalFunctionBase& other)
- {
- data_ = other.data_;
- localView_ = other.localView_;
- if (bound())
- localDoFs_ = other.localDoFs_;
- return *this;
- }
-
- public:
- /**
- * \brief Bind LocalFunction to grid element.
- *
- * You must call this method before `operator()`
- * and after changes to the coefficient vector.
- */
- void bind(const Element& element)
- {
- localView_.bind(element);
-
- localDoFs_.resize(localView_.size());
- const auto& dofs = *data_->coefficients;
- for (size_type i = 0; i < localView_.tree().size(); ++i)
- {
- // For a subspace basis the index-within-tree i
- // is not the same as the localIndex within the
- // full local view.
- size_t localIndex = localView_.tree().localIndex(i);
- localDoFs_[localIndex] = dofs[localView_.index(localIndex)];
- }
-
- // create local GFE function
- // TODO Store this object by value
- localInterpolationRule_ = std::make_unique<LocalInterpolationRule>(this->localView_.tree().finiteElement(),localDoFs_);
- }
-
- //! Unbind the local-function.
- void unbind()
- {
- localView_.unbind();
- }
-
- //! Check if LocalFunction is already bound to an element.
- bool bound() const
- {
- return localView_.bound();
- }
-
- //! Return the element the local-function is bound to.
- const Element& localContext() const
- {
- return localView_.element();
- }
-
- protected:
+ : data_(data)
+ , localView_(data_->basis->localView())
+ {
+ localDoFs_.reserve(localView_.maxSize());
+ }
+
+ /**
+ * \brief Copy-construct the local-function.
+ *
+ * This copy-constructor copies the cached local DOFs only
+ * if the `other` local-function is bound to an element.
+ **/
+ LocalFunctionBase(const LocalFunctionBase& other)
+ : data_(other.data_)
+ , localView_(other.localView_)
+ {
+ localDoFs_.reserve(localView_.maxSize());
+ if (bound())
+ localDoFs_ = other.localDoFs_;
+ }
+
+ /**
+ * \brief Copy-assignment of the local-function.
+ *
+ * Assign all members from `other` to `this`, except the
+ * local DOFs. Those are copied only if the `other`
+ * local-function is bound to an element.
+ **/
+ LocalFunctionBase& operator=(const LocalFunctionBase& other)
+ {
+ data_ = other.data_;
+ localView_ = other.localView_;
+ if (bound())
+ localDoFs_ = other.localDoFs_;
+ return *this;
+ }
+
+ public:
+ /**
+ * \brief Bind LocalFunction to grid element.
+ *
+ * You must call this method before `operator()`
+ * and after changes to the coefficient vector.
+ */
+ void bind(const Element& element)
+ {
+ localView_.bind(element);
+
+ localDoFs_.resize(localView_.size());
+ const auto& dofs = *data_->coefficients;
+ for (size_type i = 0; i < localView_.tree().size(); ++i)
+ {
+ // For a subspace basis the index-within-tree i
+ // is not the same as the localIndex within the
+ // full local view.
+ size_t localIndex = localView_.tree().localIndex(i);
+ localDoFs_[localIndex] = dofs[localView_.index(localIndex)];
+ }
+
+ // create local GFE function
+ // TODO Store this object by value
+ localInterpolationRule_ = std::make_unique<LocalInterpolationRule>(this->localView_.tree().finiteElement(),localDoFs_);
+ }
+
+ //! Unbind the local-function.
+ void unbind()
+ {
+ localView_.unbind();
+ }
+
+ //! Check if LocalFunction is already bound to an element.
+ bool bound() const
+ {
+ return localView_.bound();
+ }
+
+ //! Return the element the local-function is bound to.
+ const Element& localContext() const
+ {
+ return localView_.element();
+ }
+
+ protected:
#if DUNE_VERSION_LTE(DUNE_FUFEM, 2, 9)
- std::shared_ptr<const Data<Basis,Vector> > data_;
+ std::shared_ptr<const Data<Basis,Vector> > data_;
#else
- std::shared_ptr<const Data> data_;
+ std::shared_ptr<const Data> data_;
#endif
- LocalView localView_;
- std::vector<Coefficient> localDoFs_;
- std::unique_ptr<LocalInterpolationRule> localInterpolationRule_;
- };
+ LocalView localView_;
+ std::vector<Coefficient> localDoFs_;
+ std::unique_ptr<LocalInterpolationRule> localInterpolationRule_;
+ };
-protected:
+ protected:
#if DUNE_VERSION_LTE(DUNE_FUFEM, 2, 9)
- GlobalGFEFunctionBase(const std::shared_ptr<const Data<Basis,Vector>>& data)
- : VirtualGridViewFunction<typename B::GridView, Range>(data->basis->gridView())
- , data_(data)
+ GlobalGFEFunctionBase(const std::shared_ptr<const Data<Basis,Vector> >& data)
+ : VirtualGridViewFunction<typename B::GridView, Range>(data->basis->gridView())
+ , data_(data)
#else
- GlobalGFEFunctionBase(const std::shared_ptr<const Data>& data)
- : data_(data)
+ GlobalGFEFunctionBase(const std::shared_ptr<const Data>& data)
+ : data_(data)
#endif
- {
- /* Nothing. */
- }
+ {
+ /* Nothing. */
+ }
-public:
+ public:
- //! Return a const reference to the stored basis.
- const Basis& basis() const
- {
- return *data_->basis;
- }
+ //! Return a const reference to the stored basis.
+ const Basis& basis() const
+ {
+ return *data_->basis;
+ }
- //! Return the coefficients of this discrete function by reference.
- const Vector& dofs() const
- {
- return *data_->coefficients;
- }
+ //! Return the coefficients of this discrete function by reference.
+ const Vector& dofs() const
+ {
+ return *data_->coefficients;
+ }
- //! Get associated set of entities the local-function can be bound to.
- const EntitySet& entitySet() const
- {
- return data_->entitySet;
- }
+ //! Get associated set of entities the local-function can be bound to.
+ const EntitySet& entitySet() const
+ {
+ return data_->entitySet;
+ }
-protected:
+ protected:
#if DUNE_VERSION_LTE(DUNE_FUFEM, 2, 9)
- std::shared_ptr<const Data<Basis, Vector> > data_;
+ std::shared_ptr<const Data<Basis, Vector> > data_;
#else
- std::shared_ptr<const Data> data_;
+ std::shared_ptr<const Data> data_;
#endif
-};
+ };
-} // namespace Impl
+ } // namespace Impl
-template<typename GGF>
-class GlobalGFEFunctionDerivative;
+ template<typename GGF>
+ class GlobalGFEFunctionDerivative;
-/**
- * \brief A global geometric finite element function
- *
- * \tparam B Type of global basis
- * \tparam LIR Local interpolation rule for manifold-valued data
- * \tparam TargetSpace Range type of this function
- */
-template<typename B, typename LIR, typename TargetSpace>
-class GlobalGFEFunction
+ /**
+ * \brief A global geometric finite element function
+ *
+ * \tparam B Type of global basis
+ * \tparam LIR Local interpolation rule for manifold-valued data
+ * \tparam TargetSpace Range type of this function
+ */
+ template<typename B, typename LIR, typename TargetSpace>
+ class GlobalGFEFunction
#if DUNE_VERSION_LTE(DUNE_FUFEM, 2, 9)
- : public Impl::GlobalGFEFunctionBase<B, std::vector<TargetSpace>, LIR, typename TargetSpace::CoordinateType>
+ : public Impl::GlobalGFEFunctionBase<B, std::vector<TargetSpace>, LIR, typename TargetSpace::CoordinateType>
#else
- : public Impl::GlobalGFEFunctionBase<B, std::vector<TargetSpace>, LIR>
+ : public Impl::GlobalGFEFunctionBase<B, std::vector<TargetSpace>, LIR>
#endif
-{
+ {
#if DUNE_VERSION_LTE(DUNE_FUFEM, 2, 9)
- using Base = Impl::GlobalGFEFunctionBase<B, std::vector<TargetSpace>, LIR, typename TargetSpace::CoordinateType>;
+ using Base = Impl::GlobalGFEFunctionBase<B, std::vector<TargetSpace>, LIR, typename TargetSpace::CoordinateType>;
#else
- using Base = Impl::GlobalGFEFunctionBase<B, std::vector<TargetSpace>, LIR>;
- using Data = typename Base::Data;
+ using Base = Impl::GlobalGFEFunctionBase<B, std::vector<TargetSpace>, LIR>;
+ using Data = typename Base::Data;
#endif
-public:
- using Basis = typename Base::Basis;
- using Vector = typename Base::Vector;
+ public:
+ using Basis = typename Base::Basis;
+ using Vector = typename Base::Vector;
#if DUNE_VERSION_LTE(DUNE_FUFEM, 2, 9)
- using Data = typename Impl::Data<Basis,Vector>;
+ using Data = typename Impl::Data<Basis,Vector>;
#endif
- using LocalInterpolationRule = LIR;
+ using LocalInterpolationRule = LIR;
- using Domain = typename Base::Domain;
- using Range = typename TargetSpace::CoordinateType;
+ using Domain = typename Base::Domain;
+ using Range = typename TargetSpace::CoordinateType;
- using Traits = Functions::Imp::GridFunctionTraits<Range(Domain), typename Base::EntitySet, Functions::DefaultDerivativeTraits, 16>;
+ using Traits = Functions::Imp::GridFunctionTraits<Range(Domain), typename Base::EntitySet, Functions::DefaultDerivativeTraits, 16>;
- class LocalFunction
- : public Base::LocalFunctionBase
- {
- using LocalBase = typename Base::LocalFunctionBase;
- using size_type = typename Base::Tree::size_type;
+ class LocalFunction
+ : public Base::LocalFunctionBase
+ {
+ using LocalBase = typename Base::LocalFunctionBase;
+ using size_type = typename Base::Tree::size_type;
- public:
+ public:
- using GlobalFunction = GlobalGFEFunction;
- using Domain = typename LocalBase::Domain;
- using Range = GlobalFunction::Range;
- using Element = typename LocalBase::Element;
+ using GlobalFunction = GlobalGFEFunction;
+ using Domain = typename LocalBase::Domain;
+ using Range = GlobalFunction::Range;
+ using Element = typename LocalBase::Element;
+
+ //! Create a local-function from the associated grid-function
+ LocalFunction(const GlobalGFEFunction& globalFunction)
+ : LocalBase(globalFunction.data_)
+ {
+ /* Nothing. */
+ }
- //! Create a local-function from the associated grid-function
- LocalFunction(const GlobalGFEFunction& globalFunction)
- : LocalBase(globalFunction.data_)
+ /**
+ * \brief Evaluate this local-function in coordinates `x` in the bound element.
+ *
+ * The result of this method is undefined if you did
+ * not call bind() beforehand or changed the coefficient
+ * vector after the last call to bind(). In the latter case
+ * you have to call bind() again in order to make operator()
+ * usable.
+ */
+ Range operator()(const Domain& x) const
+ {
+ return this->localInterpolationRule_->evaluate(x).globalCoordinates();
+ }
+
+ //! Local function of the derivative
+ friend typename GlobalGFEFunctionDerivative<GlobalGFEFunction>::LocalFunction derivative(const LocalFunction& lf)
+ {
+ auto dlf = localFunction(GlobalGFEFunctionDerivative<GlobalGFEFunction>(lf.data_));
+ if (lf.bound())
+ dlf.bind(lf.localContext());
+ return dlf;
+ }
+ };
+
+ //! Create a grid-function, by wrapping the arguments in `std::shared_ptr`.
+ template<class B_T, class V_T>
+ GlobalGFEFunction(B_T && basis, V_T && coefficients)
+ : Base(std::make_shared<Data>(Data{{basis.gridView()}, wrap_or_move(std::forward<B_T>(basis)), wrap_or_move(std::forward<V_T>(coefficients))}))
+ {}
+
+ //! Create a grid-function, by moving the arguments in `std::shared_ptr`.
+ GlobalGFEFunction(std::shared_ptr<const Basis> basis, std::shared_ptr<const Vector> coefficients)
+ : Base(std::make_shared<Data>(Data{{basis->gridView()}, basis, coefficients}))
+ {}
+
+ /** \brief Evaluate at a point given in world coordinates
+ *
+ * \warning This has to find the element that the evaluation point is in.
+ * It is therefore very slow.
+ */
+ Range operator() (const Domain& x) const
{
- /* Nothing. */
+ HierarchicSearch search(this->data_->basis->gridView().grid(), this->data_->basis->gridView().indexSet());
+
+ const auto e = search.findEntity(x);
+ auto localThis = localFunction(*this);
+ localThis.bind(e);
+ return localThis(e.geometry().local(x));
+ }
+
+ //! Derivative of the `GlobalGFEFunction`
+ friend GlobalGFEFunctionDerivative<GlobalGFEFunction> derivative(const GlobalGFEFunction& f)
+ {
+ return GlobalGFEFunctionDerivative<GlobalGFEFunction>(f.data_);
}
/**
- * \brief Evaluate this local-function in coordinates `x` in the bound element.
+ * \brief Construct local function from a GlobalGFEFunction.
*
- * The result of this method is undefined if you did
- * not call bind() beforehand or changed the coefficient
- * vector after the last call to bind(). In the latter case
- * you have to call bind() again in order to make operator()
- * usable.
+ * The obtained local function satisfies the concept
+ * `Dune::Functions::Concept::LocalFunction`. It must be bound
+ * to an entity from the entity set of the GlobalGFEFunction
+ * before it can be used.
*/
- Range operator()(const Domain& x) const
+ friend LocalFunction localFunction(const GlobalGFEFunction& t)
{
- return this->localInterpolationRule_->evaluate(x).globalCoordinates();
+ return LocalFunction(t);
}
- //! Local function of the derivative
- friend typename GlobalGFEFunctionDerivative<GlobalGFEFunction>::LocalFunction derivative(const LocalFunction& lf)
+#if DUNE_VERSION_LTE(DUNE_FUFEM, 2, 9)
+ using Element = typename Basis::GridView::template Codim<0>::Entity;
+ /** \brief Evaluate the function at local coordinates. */
+ void evaluateLocal(const Element& element, const Domain& local, typename TargetSpace::CoordinateType& out) const
{
- auto dlf = localFunction(GlobalGFEFunctionDerivative<GlobalGFEFunction>(lf.data_));
- if (lf.bound())
- dlf.bind(lf.localContext());
- return dlf;
+ DUNE_THROW(NotImplemented, "!");
}
+#endif
};
- //! Create a grid-function, by wrapping the arguments in `std::shared_ptr`.
- template<class B_T, class V_T>
- GlobalGFEFunction(B_T && basis, V_T && coefficients)
- : Base(std::make_shared<Data>(Data{{basis.gridView()}, wrap_or_move(std::forward<B_T>(basis)), wrap_or_move(std::forward<V_T>(coefficients))}))
- {}
-
- //! Create a grid-function, by moving the arguments in `std::shared_ptr`.
- GlobalGFEFunction(std::shared_ptr<const Basis> basis, std::shared_ptr<const Vector> coefficients)
- : Base(std::make_shared<Data>(Data{{basis->gridView()}, basis, coefficients}))
- {}
-
- /** \brief Evaluate at a point given in world coordinates
- *
- * \warning This has to find the element that the evaluation point is in.
- * It is therefore very slow.
- */
- Range operator() (const Domain& x) const
- {
- HierarchicSearch search(this->data_->basis->gridView().grid(), this->data_->basis->gridView().indexSet());
-
- const auto e = search.findEntity(x);
- auto localThis = localFunction(*this);
- localThis.bind(e);
- return localThis(e.geometry().local(x));
- }
-
- //! Derivative of the `GlobalGFEFunction`
- friend GlobalGFEFunctionDerivative<GlobalGFEFunction> derivative(const GlobalGFEFunction& f)
- {
- return GlobalGFEFunctionDerivative<GlobalGFEFunction>(f.data_);
- }
/**
- * \brief Construct local function from a GlobalGFEFunction.
+ * \brief Derivative of a `GlobalGFEFunction`
*
- * The obtained local function satisfies the concept
- * `Dune::Functions::Concept::LocalFunction`. It must be bound
- * to an entity from the entity set of the GlobalGFEFunction
- * before it can be used.
+ * Function returning the derivative of the given `GlobalGFEFunction`
+ * with respect to global coordinates.
+ *
+ * \tparam GGF instance of the `GlobalGFEFunction` this is a derivative of
*/
- friend LocalFunction localFunction(const GlobalGFEFunction& t)
- {
- return LocalFunction(t);
- }
-
-#if DUNE_VERSION_LTE(DUNE_FUFEM, 2, 9)
- using Element = typename Basis::GridView::template Codim<0>::Entity;
- /** \brief Evaluate the function at local coordinates. */
- void evaluateLocal(const Element& element, const Domain& local, typename TargetSpace::CoordinateType& out) const
- {
- DUNE_THROW(NotImplemented, "!");
- }
-#endif
-};
-
-
-/**
- * \brief Derivative of a `GlobalGFEFunction`
- *
- * Function returning the derivative of the given `GlobalGFEFunction`
- * with respect to global coordinates.
- *
- * \tparam GGF instance of the `GlobalGFEFunction` this is a derivative of
- */
-template<typename GGF>
-class GlobalGFEFunctionDerivative
+ template<typename GGF>
+ class GlobalGFEFunctionDerivative
#if DUNE_VERSION_LTE(DUNE_FUFEM, 2, 9)
- : public Impl::GlobalGFEFunctionBase<typename GGF::Basis, typename GGF::Vector, typename GGF::LocalInterpolationRule,
- Dune::FieldMatrix<double, GGF::Vector::value_type::EmbeddedTangentVector::dimension, GGF::Basis::GridView::dimensionworld> >
+ : public Impl::GlobalGFEFunctionBase<typename GGF::Basis, typename GGF::Vector, typename GGF::LocalInterpolationRule,
+ Dune::FieldMatrix<double, GGF::Vector::value_type::EmbeddedTangentVector::dimension, GGF::Basis::GridView::dimensionworld> >
#else
- : public Impl::GlobalGFEFunctionBase<typename GGF::Basis, typename GGF::Vector, typename GGF::LocalInterpolationRule>
+ : public Impl::GlobalGFEFunctionBase<typename GGF::Basis, typename GGF::Vector, typename GGF::LocalInterpolationRule>
#endif
-{
+ {
#if DUNE_VERSION_LTE(DUNE_FUFEM, 2, 9)
- using Base = Impl::GlobalGFEFunctionBase<typename GGF::Basis, typename GGF::Vector, typename GGF::LocalInterpolationRule,
- Dune::FieldMatrix<double, GGF::Vector::value_type::EmbeddedTangentVector::dimension, GGF::Basis::GridView::dimensionworld> >;
+ using Base = Impl::GlobalGFEFunctionBase<typename GGF::Basis, typename GGF::Vector, typename GGF::LocalInterpolationRule,
+ Dune::FieldMatrix<double, GGF::Vector::value_type::EmbeddedTangentVector::dimension, GGF::Basis::GridView::dimensionworld> >;
#else
- using Base = Impl::GlobalGFEFunctionBase<typename GGF::Basis, typename GGF::Vector, typename GGF::LocalInterpolationRule>;
- using Data = typename Base::Data;
+ using Base = Impl::GlobalGFEFunctionBase<typename GGF::Basis, typename GGF::Vector, typename GGF::LocalInterpolationRule>;
+ using Data = typename Base::Data;
#endif
-public:
- using GlobalGFEFunction = GGF;
+ public:
+ using GlobalGFEFunction = GGF;
- using Basis = typename Base::Basis;
- using Vector = typename Base::Vector;
+ using Basis = typename Base::Basis;
+ using Vector = typename Base::Vector;
#if DUNE_VERSION_LTE(DUNE_FUFEM, 2, 9)
- using Data = typename Impl::Data<Basis,Vector>;
+ using Data = typename Impl::Data<Basis,Vector>;
#endif
- using Domain = typename Base::Domain;
- using Range = typename Functions::SignatureTraits<typename GlobalGFEFunction::Traits::DerivativeInterface>::Range;
-
- using Traits = Functions::Imp::GridFunctionTraits<Range(Domain), typename Base::EntitySet, Functions::DefaultDerivativeTraits, 16>;
-
- /**
- * \brief local function evaluating the derivative in reference coordinates
- *
- * Note that the function returns the derivative with respect to global
- * coordinates even when the point is given in reference coordinates on
- * an element.
- */
- class LocalFunction
- : public Base::LocalFunctionBase
- {
- using LocalBase = typename Base::LocalFunctionBase;
- using size_type = typename Base::Tree::size_type;
+ using Domain = typename Base::Domain;
+ using Range = typename Functions::SignatureTraits<typename GlobalGFEFunction::Traits::DerivativeInterface>::Range;
- public:
- using GlobalFunction = GlobalGFEFunctionDerivative;
- using Domain = typename LocalBase::Domain;
- using Range = GlobalFunction::Range;
- using Element = typename LocalBase::Element;
-
- //! Create a local function from the associated grid function
- LocalFunction(const GlobalFunction& globalFunction)
- : LocalBase(globalFunction.data_)
- {
- /* Nothing. */
- }
+ using Traits = Functions::Imp::GridFunctionTraits<Range(Domain), typename Base::EntitySet, Functions::DefaultDerivativeTraits, 16>;
/**
- * \brief Bind LocalFunction to grid element.
+ * \brief local function evaluating the derivative in reference coordinates
*
- * You must call this method before `operator()`
- * and after changes to the coefficient vector.
+ * Note that the function returns the derivative with respect to global
+ * coordinates even when the point is given in reference coordinates on
+ * an element.
*/
- void bind(const Element& element)
+ class LocalFunction
+ : public Base::LocalFunctionBase
{
- LocalBase::bind(element);
- geometry_.emplace(element.geometry());
- }
+ using LocalBase = typename Base::LocalFunctionBase;
+ using size_type = typename Base::Tree::size_type;
+
+ public:
+ using GlobalFunction = GlobalGFEFunctionDerivative;
+ using Domain = typename LocalBase::Domain;
+ using Range = GlobalFunction::Range;
+ using Element = typename LocalBase::Element;
+
+ //! Create a local function from the associated grid function
+ LocalFunction(const GlobalFunction& globalFunction)
+ : LocalBase(globalFunction.data_)
+ {
+ /* Nothing. */
+ }
- //! Unbind the local-function.
- void unbind()
- {
- geometry_.reset();
- LocalBase::unbind();
- }
+ /**
+ * \brief Bind LocalFunction to grid element.
+ *
+ * You must call this method before `operator()`
+ * and after changes to the coefficient vector.
+ */
+ void bind(const Element& element)
+ {
+ LocalBase::bind(element);
+ geometry_.emplace(element.geometry());
+ }
+
+ //! Unbind the local-function.
+ void unbind()
+ {
+ geometry_.reset();
+ LocalBase::unbind();
+ }
+
+ /**
+ * \brief Evaluate this local-function in coordinates `x` in the bound element.
+ *
+ * The result of this method is undefined if you did
+ * not call bind() beforehand or changed the coefficient
+ * vector after the last call to bind(). In the latter case
+ * you have to call bind() again in order to make operator()
+ * usable.
+ *
+ * Note that the function returns the derivative with respect to global
+ * coordinates even though the evaluation point is given in reference coordinates
+ * on the current element.
+ */
+ Range operator()(const Domain& x) const
+ {
+ // Jacobian with respect to local coordinates
+ auto refJac = this->localInterpolationRule_->evaluateDerivative(x);
+
+ // Transform to world coordinates
+ return refJac * geometry_->jacobianInverse(x);
+ }
+
+ //! Not implemented
+ friend typename Traits::LocalFunctionTraits::DerivativeInterface derivative(const LocalFunction&)
+ {
+ DUNE_THROW(NotImplemented, "derivative of derivative is not implemented");
+ }
+
+ private:
+ std::optional<typename Element::Geometry> geometry_;
+ };
/**
- * \brief Evaluate this local-function in coordinates `x` in the bound element.
+ * \brief create object from `GlobalGFEFunction` data
*
- * The result of this method is undefined if you did
- * not call bind() beforehand or changed the coefficient
- * vector after the last call to bind(). In the latter case
- * you have to call bind() again in order to make operator()
- * usable.
+ * Please call `derivative(globalGFEFunction)` to create an instance
+ * of this class.
+ */
+ GlobalGFEFunctionDerivative(const std::shared_ptr<const Data>& data)
+ : Base(data)
+ {
+ /* Nothing. */
+ }
+
+ /** \brief Evaluate the discrete grid-function derivative in global coordinates
*
- * Note that the function returns the derivative with respect to global
- * coordinates even though the evaluation point is given in reference coordinates
- * on the current element.
+ * \warning This has to find the element that the evaluation point is in.
+ * It is therefore very slow.
*/
Range operator()(const Domain& x) const
{
- // Jacobian with respect to local coordinates
- auto refJac = this->localInterpolationRule_->evaluateDerivative(x);
+ HierarchicSearch search(this->data_->basis->gridView().grid(), this->data_->basis->gridView().indexSet());
- // Transform to world coordinates
- return refJac * geometry_->jacobianInverse(x);
+ const auto e = search.findEntity(x);
+ auto localThis = localFunction(*this);
+ localThis.bind(e);
+ return localThis(e.geometry().local(x));
}
- //! Not implemented
- friend typename Traits::LocalFunctionTraits::DerivativeInterface derivative(const LocalFunction&)
+ friend typename Traits::DerivativeInterface derivative(const GlobalGFEFunctionDerivative& f)
{
DUNE_THROW(NotImplemented, "derivative of derivative is not implemented");
}
- private:
- std::optional<typename Element::Geometry> geometry_;
- };
-
- /**
- * \brief create object from `GlobalGFEFunction` data
- *
- * Please call `derivative(globalGFEFunction)` to create an instance
- * of this class.
- */
- GlobalGFEFunctionDerivative(const std::shared_ptr<const Data>& data)
- : Base(data)
- {
- /* Nothing. */
- }
-
- /** \brief Evaluate the discrete grid-function derivative in global coordinates
- *
- * \warning This has to find the element that the evaluation point is in.
- * It is therefore very slow.
- */
- Range operator()(const Domain& x) const
- {
- HierarchicSearch search(this->data_->basis->gridView().grid(), this->data_->basis->gridView().indexSet());
-
- const auto e = search.findEntity(x);
- auto localThis = localFunction(*this);
- localThis.bind(e);
- return localThis(e.geometry().local(x));
- }
-
- friend typename Traits::DerivativeInterface derivative(const GlobalGFEFunctionDerivative& f)
- {
- DUNE_THROW(NotImplemented, "derivative of derivative is not implemented");
- }
-
- //! Construct local function from a `GlobalGFEFunctionDerivative`
- friend LocalFunction localFunction(const GlobalGFEFunctionDerivative& f)
- {
- return LocalFunction(f);
- }
+ //! Construct local function from a `GlobalGFEFunctionDerivative`
+ friend LocalFunction localFunction(const GlobalGFEFunctionDerivative& f)
+ {
+ return LocalFunction(f);
+ }
#if DUNE_VERSION_LTE(DUNE_FUFEM, 2, 9)
- using Element = typename Basis::GridView::template Codim<0>::Entity;
- /** \brief Evaluate the function at local coordinates. */
- void evaluateLocal(const Element& element, const Domain& local, Range& out) const override
- {
- // This method will never be called.
- }
+ using Element = typename Basis::GridView::template Codim<0>::Entity;
+ /** \brief Evaluate the function at local coordinates. */
+ void evaluateLocal(const Element& element, const Domain& local, Range& out) const override
+ {
+ // This method will never be called.
+ }
#endif
-};
+ };
} // namespace Dune::GFE
diff --git a/dune/gfe/gramschmidtsolver.hh b/dune/gfe/gramschmidtsolver.hh
index 202fd21b..69104265 100644
--- a/dune/gfe/gramschmidtsolver.hh
+++ b/dune/gfe/gramschmidtsolver.hh
@@ -61,7 +61,7 @@ public:
*/
GramSchmidtSolver(const Dune::SymmetricMatrix<field_type,embeddedDim>& matrix,
const Dune::FieldMatrix<field_type,rank,embeddedDim>& basis)
- : orthonormalBasis_(basis)
+ : orthonormalBasis_(basis)
{
// Use the Gram-Schmidt algorithm to compute a basis that is orthonormal
// with respect to the given matrix.
diff --git a/dune/gfe/linearalgebra.hh b/dune/gfe/linearalgebra.hh
index 2d6f7433..a7a6ea7e 100644
--- a/dune/gfe/linearalgebra.hh
+++ b/dune/gfe/linearalgebra.hh
@@ -17,13 +17,13 @@ namespace Dune {
namespace GFE {
#if ADOLC_ADOUBLE_H
- /** \brief Calculates ret = s*A, where A has as field_type of adouble.
- *
- * The function template is disabled if s isn't a scalar or adolc type.
- */
- template<typename T1,int m, int n,class = typename std::enable_if< std::is_scalar_v<T1> || std::is_base_of_v<badouble,T1> >::type >
- auto operator* ( const T1& s, const Dune::FieldMatrix<adouble, m, n> &A)
- {
+ /** \brief Calculates ret = s*A, where A has as field_type of adouble.
+ *
+ * The function template is disabled if s isn't a scalar or adolc type.
+ */
+ template<typename T1,int m, int n,class = typename std::enable_if< std::is_scalar_v<T1> || std::is_base_of_v<badouble,T1> >::type >
+ auto operator* ( const T1& s, const Dune::FieldMatrix<adouble, m, n> &A)
+ {
typedef typename Dune::FieldMatrix<adouble,m,n> :: size_type size_type;
Dune::FieldMatrix<adouble,m,n> ret;
@@ -32,43 +32,43 @@ namespace Dune {
ret[i][j] = s * A[i][j];
return ret;
- }
+ }
- /** \brief Calculates ret = A*v, where A has as field_type of adouble.
- *
- * The function template is disabled if the field_type of v is no an adolc type
- */
- template<typename T1,int m, int n,class = typename std::enable_if< std::is_base_of_v<badouble,T1> >::type >
- auto operator* (const Dune::FieldMatrix<double, m, n> &A, const Dune::FieldVector<T1,n>& v )
- {
- typedef typename Dune::FieldMatrix<adouble,m,n> :: size_type size_type;
- Dune::FieldVector<adouble,m> ret(0.0);
-
- for( size_type i = 0; i < m; ++i )
- for( size_type j = 0; j < n; ++j )
- ret[i] += A[i][j]*v[j];
-
- return ret;
- }
+ /** \brief Calculates ret = A*v, where A has as field_type of adouble.
+ *
+ * The function template is disabled if the field_type of v is no an adolc type
+ */
+ template<typename T1,int m, int n,class = typename std::enable_if< std::is_base_of_v<badouble,T1> >::type >
+ auto operator* (const Dune::FieldMatrix<double, m, n> &A, const Dune::FieldVector<T1,n>& v )
+ {
+ typedef typename Dune::FieldMatrix<adouble,m,n> :: size_type size_type;
+ Dune::FieldVector<adouble,m> ret(0.0);
+
+ for( size_type i = 0; i < m; ++i )
+ for( size_type j = 0; j < n; ++j )
+ ret[i] += A[i][j]*v[j];
+ return ret;
+ }
- /** \brief Calculates ret = A*s, where A has as field_type of adouble.
- *
- * The function template is disabled if s isn't a scalar or adolc type.
- */
- template<typename T1,int m, int n,class = typename std::enable_if< std::is_scalar_v<T1> || std::is_base_of_v<badouble,T1> >::type >
- auto operator* (const Dune::FieldMatrix<adouble, m, n> &A, const T1& s )
- {
- return s*A;
- }
+
+ /** \brief Calculates ret = A*s, where A has as field_type of adouble.
+ *
+ * The function template is disabled if s isn't a scalar or adolc type.
+ */
+ template<typename T1,int m, int n,class = typename std::enable_if< std::is_scalar_v<T1> || std::is_base_of_v<badouble,T1> >::type >
+ auto operator* (const Dune::FieldMatrix<adouble, m, n> &A, const T1& s )
+ {
+ return s*A;
+ }
#endif
#if !DUNE_VERSION_NEWER(DUNE_COMMON, 2, 8)
- /** \brief Multiplication of a ScaledIdentityMatrix with another FieldMatrix */
- template <class T, int N, int otherCols>
- Dune::FieldMatrix<T,N,otherCols> operator* ( const Dune::ScaledIdentityMatrix<T, N>& diagonalMatrix,
- const Dune::FieldMatrix<T, N, otherCols>& matrix)
- {
+ /** \brief Multiplication of a ScaledIdentityMatrix with another FieldMatrix */
+ template <class T, int N, int otherCols>
+ Dune::FieldMatrix<T,N,otherCols> operator* ( const Dune::ScaledIdentityMatrix<T, N>& diagonalMatrix,
+ const Dune::FieldMatrix<T, N, otherCols>& matrix)
+ {
Dune::FieldMatrix<T,N,otherCols> result(0);
for (size_t i = 0; i < N; ++i)
@@ -76,114 +76,114 @@ namespace Dune {
result[i][j] = diagonalMatrix[i][i]*matrix[i][j];
return result;
- }
+ }
#endif
- /** \brief Return the trace of a matrix */
- template <class T, int n>
- static T trace(const FieldMatrix<T,n,n>& A)
- {
- T trace = 0;
- for (int i=0; i<n; i++)
- trace += A[i][i];
- return trace;
- }
+ /** \brief Return the trace of a matrix */
+ template <class T, int n>
+ static T trace(const FieldMatrix<T,n,n>& A)
+ {
+ T trace = 0;
+ for (int i=0; i<n; i++)
+ trace += A[i][i];
+ return trace;
+ }
- /** \brief Return the square of the trace of a matrix */
- template <class T, int n>
- static T traceSquared(const FieldMatrix<T,n,n>& A)
- {
- T trace = 0;
- for (int i=0; i<n; i++)
- trace += A[i][i];
- return trace*trace;
- }
+ /** \brief Return the square of the trace of a matrix */
+ template <class T, int n>
+ static T traceSquared(const FieldMatrix<T,n,n>& A)
+ {
+ T trace = 0;
+ for (int i=0; i<n; i++)
+ trace += A[i][i];
+ return trace*trace;
+ }
- /** \brief Compute the symmetric part of a matrix A, i.e. \f$ \frac 12 (A + A^T) \f$ */
- template <class T, int n>
- static FieldMatrix<T,n,n> sym(const FieldMatrix<T,n,n>& A)
- {
- FieldMatrix<T,n,n> result;
- for (int i=0; i<n; i++)
- for (int j=0; j<n; j++)
- result[i][j] = 0.5 * (A[i][j] + A[j][i]);
- return result;
- }
+ /** \brief Compute the symmetric part of a matrix A, i.e. \f$ \frac 12 (A + A^T) \f$ */
+ template <class T, int n>
+ static FieldMatrix<T,n,n> sym(const FieldMatrix<T,n,n>& A)
+ {
+ FieldMatrix<T,n,n> result;
+ for (int i=0; i<n; i++)
+ for (int j=0; j<n; j++)
+ result[i][j] = 0.5 * (A[i][j] + A[j][i]);
+ return result;
+ }
- /** \brief Compute the antisymmetric part of a matrix A, i.e. \f$ \frac 12 (A - A^T) \f$ */
- template <class T, int n>
- static FieldMatrix<T,n,n> skew(const FieldMatrix<T,n,n>& A)
- {
- FieldMatrix<T,n,n> result;
- for (int i=0; i<n; i++)
- for (int j=0; j<n; j++)
- result[i][j] = 0.5 * (A[i][j] - A[j][i]);
- return result;
- }
+ /** \brief Compute the antisymmetric part of a matrix A, i.e. \f$ \frac 12 (A - A^T) \f$ */
+ template <class T, int n>
+ static FieldMatrix<T,n,n> skew(const FieldMatrix<T,n,n>& A)
+ {
+ FieldMatrix<T,n,n> result;
+ for (int i=0; i<n; i++)
+ for (int j=0; j<n; j++)
+ result[i][j] = 0.5 * (A[i][j] - A[j][i]);
+ return result;
+ }
- /** \brief Compute the deviator of a matrix A */
- template <class T, int n>
- static FieldMatrix<T,n,n> dev(const FieldMatrix<T,n,n>& A)
- {
- FieldMatrix<T,n,n> result = A;
- auto t = trace(A);
- for (int i=0; i<n; i++)
- result[i][i] -= t / n;
- return result;
- }
+ /** \brief Compute the deviator of a matrix A */
+ template <class T, int n>
+ static FieldMatrix<T,n,n> dev(const FieldMatrix<T,n,n>& A)
+ {
+ FieldMatrix<T,n,n> result = A;
+ auto t = trace(A);
+ for (int i=0; i<n; i++)
+ result[i][i] -= t / n;
+ return result;
+ }
- /** \brief Return the transposed matrix */
- template <class T, int n, int m>
- static FieldMatrix<T,m,n> transpose(const FieldMatrix<T,n,m>& A)
- {
- FieldMatrix<T,m,n> result;
+ /** \brief Return the transposed matrix */
+ template <class T, int n, int m>
+ static FieldMatrix<T,m,n> transpose(const FieldMatrix<T,n,m>& A)
+ {
+ FieldMatrix<T,m,n> result;
- for (int i=0; i<m; i++)
- for (int j=0; j<n; j++)
- result[i][j] = A[j][i];
+ for (int i=0; i<m; i++)
+ for (int j=0; j<n; j++)
+ result[i][j] = A[j][i];
- return result;
- }
+ return result;
+ }
- /** \brief The Frobenius (i.e., componentwise) product of two matrices */
- template <class T, int n>
- static T frobeniusProduct(const FieldMatrix<T,n,n>& A, const FieldMatrix<T,n,n>& B)
- {
- T result(0.0);
+ /** \brief The Frobenius (i.e., componentwise) product of two matrices */
+ template <class T, int n>
+ static T frobeniusProduct(const FieldMatrix<T,n,n>& A, const FieldMatrix<T,n,n>& B)
+ {
+ T result(0.0);
- for (int i=0; i<n; i++)
- for (int j=0; j<n; j++)
- result += A[i][j] * B[i][j];
+ for (int i=0; i<n; i++)
+ for (int j=0; j<n; j++)
+ result += A[i][j] * B[i][j];
- return result;
- }
+ return result;
+ }
- /** \brief Return a*b^T */
- template <class T1,class T2, int n, int m>
- static auto dyadicProduct(const FieldVector<T1,n>& a, const FieldVector<T2,m>& b)
- {
- using ScalarResultType = typename Dune::PromotionTraits<T1,T2>::PromotedType;
- FieldMatrix<ScalarResultType,n,m> result;
- for (int i=0; i<n; i++)
- for (int j=0; j<m; j++)
- result[i][j] = a[i]*b[j];
+ /** \brief Return a*b^T */
+ template <class T1,class T2, int n, int m>
+ static auto dyadicProduct(const FieldVector<T1,n>& a, const FieldVector<T2,m>& b)
+ {
+ using ScalarResultType = typename Dune::PromotionTraits<T1,T2>::PromotedType;
+ FieldMatrix<ScalarResultType,n,m> result;
+ for (int i=0; i<n; i++)
+ for (int j=0; j<m; j++)
+ result[i][j] = a[i]*b[j];
- return result;
- }
+ return result;
+ }
- /** \brief Get the requested column of fieldmatrix */
- template<typename field_type, int cols, int rows>
- auto col(const Dune::FieldMatrix<field_type, rows, cols> &mat, const int requestedCol)
- {
- Dune::FieldVector<field_type, rows> col;
+ /** \brief Get the requested column of fieldmatrix */
+ template<typename field_type, int cols, int rows>
+ auto col(const Dune::FieldMatrix<field_type, rows, cols> &mat, const int requestedCol)
+ {
+ Dune::FieldVector<field_type, rows> col;
- for (int i = 0; i < rows; ++i)
- col[i] = mat[i][requestedCol];
+ for (int i = 0; i < rows; ++i)
+ col[i] = mat[i][requestedCol];
- return col;
- }
+ return col;
+ }
/** \brief Return a segment of a FieldVector from lower up to lower+size-1 */
template< int lower, int size,typename field_type,int n>
@@ -217,19 +217,19 @@ namespace Dune {
return res;
}
- /** \brief Return a block of a FieldMatrix (lower1...lower1+size1-1,lower2...lower2+size2-1
- * * lower1 and lower2 are unknown at compile time*/
- template< int size1,int size2,typename field_type,int n,int m>
- static auto blockAt(const FieldMatrix<field_type,n,m>& v, const size_t& lower1, const size_t& lower2)
- {
- assert(lower1+size1<=n && lower2+size2<=m);
- FieldMatrix<field_type,size1,size2> res;
+ /** \brief Return a block of a FieldMatrix (lower1...lower1+size1-1,lower2...lower2+size2-1
+ * * lower1 and lower2 are unknown at compile time*/
+ template< int size1,int size2,typename field_type,int n,int m>
+ static auto blockAt(const FieldMatrix<field_type,n,m>& v, const size_t& lower1, const size_t& lower2)
+ {
+ assert(lower1+size1<=n && lower2+size2<=m);
+ FieldMatrix<field_type,size1,size2> res;
- for(size_t i=lower1; i<lower1+size1; ++i)
- for(size_t j=lower2; j<lower2+size2; ++j)
- res[i-lower1][j-lower2] = v[i][j];
- return res;
- }
+ for(size_t i=lower1; i<lower1+size1; ++i)
+ for(size_t j=lower2; j<lower2+size2; ++j)
+ res[i-lower1][j-lower2] = v[i][j];
+ return res;
+ }
/** \brief Generates FieldVector with random entries in the range -1..1 */
template<typename field_type,int n>
diff --git a/dune/gfe/localgeodesicfefunction.hh b/dune/gfe/localgeodesicfefunction.hh
index 8318f9d6..76e0d864 100644
--- a/dune/gfe/localgeodesicfefunction.hh
+++ b/dune/gfe/localgeodesicfefunction.hh
@@ -23,161 +23,161 @@ class LocalGfeTestFunctionBasis;
/** \brief A function defined by simplicial geodesic interpolation
from the reference element to a Riemannian manifold.
-\tparam dim Dimension of the reference element
-\tparam ctype Type used for coordinates on the reference element
-\tparam LocalFiniteElement A Lagrangian finite element whose shape functions define the interpolation weights
-\tparam TargetSpace The manifold that the function takes its values in
-*/
+ \tparam dim Dimension of the reference element
+ \tparam ctype Type used for coordinates on the reference element
+ \tparam LocalFiniteElement A Lagrangian finite element whose shape functions define the interpolation weights
+ \tparam TargetSpace The manifold that the function takes its values in
+ */
template <int dim, class ctype, class LocalFiniteElement, class TargetSpace>
class LocalGeodesicFEFunction
{
- typedef typename TargetSpace::ctype RT;
+ typedef typename TargetSpace::ctype RT;
- typedef typename TargetSpace::EmbeddedTangentVector EmbeddedTangentVector;
- static const int embeddedDim = EmbeddedTangentVector::dimension;
+ typedef typename TargetSpace::EmbeddedTangentVector EmbeddedTangentVector;
+ static const int embeddedDim = EmbeddedTangentVector::dimension;
- static const int spaceDim = TargetSpace::TangentVector::dimension;
+ static const int spaceDim = TargetSpace::TangentVector::dimension;
- friend class LocalGfeTestFunctionBasis<LocalFiniteElement,TargetSpace>;
+ friend class LocalGfeTestFunctionBasis<LocalFiniteElement,TargetSpace>;
public:
- /** \brief The type used for derivatives */
- typedef Dune::FieldMatrix<RT, embeddedDim, dim> DerivativeType;
-
- /** \brief The type used for derivatives of the gradient with respect to coefficients */
- typedef Tensor3<RT,embeddedDim,embeddedDim,dim> DerivativeOfGradientWRTCoefficientType;
-
- /** \brief Constructor
- * \param localFiniteElement A Lagrangian finite element that provides the interpolation points
- * \param coefficients Values of the function at the Lagrange points
- */
- LocalGeodesicFEFunction(const LocalFiniteElement& localFiniteElement,
- const std::vector<TargetSpace>& coefficients)
- : localFiniteElement_(localFiniteElement),
- coefficients_(coefficients)
- {
- assert(localFiniteElement_.localBasis().size() == coefficients_.size());
- }
-
- /** \brief Rebind the FEFunction to another TargetSpace */
- template<class U>
- struct rebind
- {
- using other = LocalGeodesicFEFunction<dim,ctype,LocalFiniteElement,U>;
- };
-
- /** \brief The number of Lagrange points */
- unsigned int size() const
- {
- return localFiniteElement_.localBasis().size();
- }
-
- /** \brief The type of the reference element */
- Dune::GeometryType type() const
- {
- return localFiniteElement_.type();
- }
-
- /** \brief Evaluate the function */
- TargetSpace evaluate(const Dune::FieldVector<ctype, dim>& local) const;
-
- /** \brief Evaluate the derivative of the function */
- DerivativeType evaluateDerivative(const Dune::FieldVector<ctype, dim>& local) const;
+ /** \brief The type used for derivatives */
+ typedef Dune::FieldMatrix<RT, embeddedDim, dim> DerivativeType;
- /** \brief Evaluate the derivative of the function, if you happen to know the function value (much faster!)
- \param local Local coordinates in the reference element where to evaluate the derivative
- \param q Value of the local gfe function at 'local'. If you provide something wrong here the result will be wrong, too!
- */
- DerivativeType evaluateDerivative(const Dune::FieldVector<ctype, dim>& local,
- const TargetSpace& q) const;
+ /** \brief The type used for derivatives of the gradient with respect to coefficients */
+ typedef Tensor3<RT,embeddedDim,embeddedDim,dim> DerivativeOfGradientWRTCoefficientType;
- /** \brief Evaluate the derivative of the function value with respect to a coefficient */
- void evaluateDerivativeOfValueWRTCoefficient(const Dune::FieldVector<ctype, dim>& local,
+ /** \brief Constructor
+ * \param localFiniteElement A Lagrangian finite element that provides the interpolation points
+ * \param coefficients Values of the function at the Lagrange points
+ */
+ LocalGeodesicFEFunction(const LocalFiniteElement& localFiniteElement,
+ const std::vector<TargetSpace>& coefficients)
+ : localFiniteElement_(localFiniteElement),
+ coefficients_(coefficients)
+ {
+ assert(localFiniteElement_.localBasis().size() == coefficients_.size());
+ }
+
+ /** \brief Rebind the FEFunction to another TargetSpace */
+ template<class U>
+ struct rebind
+ {
+ using other = LocalGeodesicFEFunction<dim,ctype,LocalFiniteElement,U>;
+ };
+
+ /** \brief The number of Lagrange points */
+ unsigned int size() const
+ {
+ return localFiniteElement_.localBasis().size();
+ }
+
+ /** \brief The type of the reference element */
+ Dune::GeometryType type() const
+ {
+ return localFiniteElement_.type();
+ }
+
+ /** \brief Evaluate the function */
+ TargetSpace evaluate(const Dune::FieldVector<ctype, dim>& local) const;
+
+ /** \brief Evaluate the derivative of the function */
+ DerivativeType evaluateDerivative(const Dune::FieldVector<ctype, dim>& local) const;
+
+ /** \brief Evaluate the derivative of the function, if you happen to know the function value (much faster!)
+ \param local Local coordinates in the reference element where to evaluate the derivative
+ \param q Value of the local gfe function at 'local'. If you provide something wrong here the result will be wrong, too!
+ */
+ DerivativeType evaluateDerivative(const Dune::FieldVector<ctype, dim>& local,
+ const TargetSpace& q) const;
+
+ /** \brief Evaluate the derivative of the function value with respect to a coefficient */
+ void evaluateDerivativeOfValueWRTCoefficient(const Dune::FieldVector<ctype, dim>& local,
+ int coefficient,
+ Dune::FieldMatrix<RT,embeddedDim,embeddedDim>& derivative) const;
+
+ /** \brief Evaluate the derivative of the function value with respect to a coefficient */
+ void evaluateFDDerivativeOfValueWRTCoefficient(const Dune::FieldVector<ctype, dim>& local,
int coefficient,
Dune::FieldMatrix<RT,embeddedDim,embeddedDim>& derivative) const;
- /** \brief Evaluate the derivative of the function value with respect to a coefficient */
- void evaluateFDDerivativeOfValueWRTCoefficient(const Dune::FieldVector<ctype, dim>& local,
- int coefficient,
- Dune::FieldMatrix<RT,embeddedDim,embeddedDim>& derivative) const;
+ /** \brief Evaluate the derivative of the gradient of the function with respect to a coefficient */
+ void evaluateDerivativeOfGradientWRTCoefficient(const Dune::FieldVector<ctype, dim>& local,
+ int coefficient,
+ DerivativeOfGradientWRTCoefficientType& result) const;
- /** \brief Evaluate the derivative of the gradient of the function with respect to a coefficient */
- void evaluateDerivativeOfGradientWRTCoefficient(const Dune::FieldVector<ctype, dim>& local,
+ /** \brief Evaluate the derivative of the gradient of the function with respect to a coefficient */
+ void evaluateFDDerivativeOfGradientWRTCoefficient(const Dune::FieldVector<ctype, dim>& local,
int coefficient,
DerivativeOfGradientWRTCoefficientType& result) const;
- /** \brief Evaluate the derivative of the gradient of the function with respect to a coefficient */
- void evaluateFDDerivativeOfGradientWRTCoefficient(const Dune::FieldVector<ctype, dim>& local,
- int coefficient,
- DerivativeOfGradientWRTCoefficientType& result) const;
-
- /** \brief Get the i'th base coefficient. */
- TargetSpace coefficient(int i) const
- {
- return coefficients_[i];
- }
+ /** \brief Get the i'th base coefficient. */
+ TargetSpace coefficient(int i) const
+ {
+ return coefficients_[i];
+ }
private:
- static Dune::SymmetricMatrix<RT,embeddedDim> pseudoInverse(const Dune::SymmetricMatrix<RT,embeddedDim>& dFdq,
- const TargetSpace& q)
- {
- const int shortDim = TargetSpace::TangentVector::dimension;
-
- // the orthonormal frame
- Dune::FieldMatrix<RT,shortDim,embeddedDim> O = q.orthonormalFrame();
-
- // compute A = O dFDq O^T
- // TODO A really is symmetric, too
- Dune::FieldMatrix<RT,shortDim,shortDim> A;
- for (int i=0; i<shortDim; i++)
- for (int j=0; j<shortDim; j++) {
- A[i][j] = 0;
- for (int k=0; k<embeddedDim; k++)
- for (int l=0; l<embeddedDim; l++)
- A[i][j] += O[i][k] * ((k>=l) ? dFdq(k,l) : dFdq(l,k)) *O[j][l];
- }
-
- A.invert();
-
- Dune::SymmetricMatrix<RT,embeddedDim> result;
- result = 0.0;
- for (int i=0; i<embeddedDim; i++)
- for (int j=0; j<=i; j++)
- for (int k=0; k<shortDim; k++)
- for (int l=0; l<shortDim; l++)
- result(i,j) += O[k][i]*A[k][l]*O[l][j];
-
- return result;
- }
+ static Dune::SymmetricMatrix<RT,embeddedDim> pseudoInverse(const Dune::SymmetricMatrix<RT,embeddedDim>& dFdq,
+ const TargetSpace& q)
+ {
+ const int shortDim = TargetSpace::TangentVector::dimension;
- /** \brief Compute derivate of F(w,q) (the derivative of the weighted distance fctl) wrt to w */
- Dune::Matrix<RT> computeDFdw(const TargetSpace& q) const
- {
- Dune::Matrix<RT> dFdw(embeddedDim,localFiniteElement_.localBasis().size());
- for (size_t i=0; i<localFiniteElement_.localBasis().size(); i++) {
- Dune::FieldVector<RT,embeddedDim> tmp = TargetSpace::derivativeOfDistanceSquaredWRTSecondArgument(coefficients_[i], q);
- for (int j=0; j<embeddedDim; j++)
- dFdw[j][i] = tmp[j];
- }
- return dFdw;
- }
+ // the orthonormal frame
+ Dune::FieldMatrix<RT,shortDim,embeddedDim> O = q.orthonormalFrame();
+
+ // compute A = O dFDq O^T
+ // TODO A really is symmetric, too
+ Dune::FieldMatrix<RT,shortDim,shortDim> A;
+ for (int i=0; i<shortDim; i++)
+ for (int j=0; j<shortDim; j++) {
+ A[i][j] = 0;
+ for (int k=0; k<embeddedDim; k++)
+ for (int l=0; l<embeddedDim; l++)
+ A[i][j] += O[i][k] * ((k>=l) ? dFdq(k,l) : dFdq(l,k)) *O[j][l];
+ }
+
+ A.invert();
- Tensor3<RT,embeddedDim,embeddedDim,embeddedDim> computeDqDqF(const std::vector<Dune::FieldVector<ctype,1> >& w, const TargetSpace& q) const
- {
- Tensor3<RT,embeddedDim,embeddedDim,embeddedDim> result;
- result = Tensor3<RT,embeddedDim,embeddedDim,embeddedDim>(RT(0));
- for (size_t i=0; i<w.size(); i++)
- result.axpy(w[i][0], TargetSpace::thirdDerivativeOfDistanceSquaredWRTSecondArgument(coefficients_[i],q));
- return result;
+ Dune::SymmetricMatrix<RT,embeddedDim> result;
+ result = 0.0;
+ for (int i=0; i<embeddedDim; i++)
+ for (int j=0; j<=i; j++)
+ for (int k=0; k<shortDim; k++)
+ for (int l=0; l<shortDim; l++)
+ result(i,j) += O[k][i]*A[k][l]*O[l][j];
+
+ return result;
+ }
+
+ /** \brief Compute derivate of F(w,q) (the derivative of the weighted distance fctl) wrt to w */
+ Dune::Matrix<RT> computeDFdw(const TargetSpace& q) const
+ {
+ Dune::Matrix<RT> dFdw(embeddedDim,localFiniteElement_.localBasis().size());
+ for (size_t i=0; i<localFiniteElement_.localBasis().size(); i++) {
+ Dune::FieldVector<RT,embeddedDim> tmp = TargetSpace::derivativeOfDistanceSquaredWRTSecondArgument(coefficients_[i], q);
+ for (int j=0; j<embeddedDim; j++)
+ dFdw[j][i] = tmp[j];
}
+ return dFdw;
+ }
+
+ Tensor3<RT,embeddedDim,embeddedDim,embeddedDim> computeDqDqF(const std::vector<Dune::FieldVector<ctype,1> >& w, const TargetSpace& q) const
+ {
+ Tensor3<RT,embeddedDim,embeddedDim,embeddedDim> result;
+ result = Tensor3<RT,embeddedDim,embeddedDim,embeddedDim>(RT(0));
+ for (size_t i=0; i<w.size(); i++)
+ result.axpy(w[i][0], TargetSpace::thirdDerivativeOfDistanceSquaredWRTSecondArgument(coefficients_[i],q));
+ return result;
+ }
- /** \brief The scalar local finite element, which provides the weighting factors
- \todo We really only need the local basis
- */
- const LocalFiniteElement& localFiniteElement_;
+ /** \brief The scalar local finite element, which provides the weighting factors
+ \todo We really only need the local basis
+ */
+ const LocalFiniteElement& localFiniteElement_;
- /** \brief The coefficient vector */
- std::vector<TargetSpace> coefficients_;
+ /** \brief The coefficient vector */
+ std::vector<TargetSpace> coefficients_;
};
@@ -185,29 +185,29 @@ template <int dim, class ctype, class LocalFiniteElement, class TargetSpace>
TargetSpace LocalGeodesicFEFunction<dim,ctype,LocalFiniteElement,TargetSpace>::
evaluate(const Dune::FieldVector<ctype, dim>& local) const
{
- // Evaluate the weighting factors---these are the Lagrangian shape function values at 'local'
- std::vector<Dune::FieldVector<ctype,1> > w;
- localFiniteElement_.localBasis().evaluateFunction(local,w);
+ // Evaluate the weighting factors---these are the Lagrangian shape function values at 'local'
+ std::vector<Dune::FieldVector<ctype,1> > w;
+ localFiniteElement_.localBasis().evaluateFunction(local,w);
- // The energy functional whose mimimizer is the value of the geodesic interpolation
- AverageDistanceAssembler<TargetSpace> assembler(coefficients_, w);
+ // The energy functional whose mimimizer is the value of the geodesic interpolation
+ AverageDistanceAssembler<TargetSpace> assembler(coefficients_, w);
- // Create a reasonable initial iterate for the iterative solver
- Dune::GFE::LocalQuickAndDirtyFEFunction<dim,ctype,LocalFiniteElement,TargetSpace> localProjectedFEFunction(localFiniteElement_, coefficients_);
- TargetSpace initialIterate = localProjectedFEFunction.evaluate(local);
+ // Create a reasonable initial iterate for the iterative solver
+ Dune::GFE::LocalQuickAndDirtyFEFunction<dim,ctype,LocalFiniteElement,TargetSpace> localProjectedFEFunction(localFiniteElement_, coefficients_);
+ TargetSpace initialIterate = localProjectedFEFunction.evaluate(local);
- // Iteratively solve the GFE minimization problem
- TargetSpaceRiemannianTRSolver<TargetSpace> solver;
+ // Iteratively solve the GFE minimization problem
+ TargetSpaceRiemannianTRSolver<TargetSpace> solver;
- solver.setup(&assembler,
- initialIterate,
- 1e-14, // tolerance
- 100 // maxNewtonSteps
- );
+ solver.setup(&assembler,
+ initialIterate,
+ 1e-14, // tolerance
+ 100 // maxNewtonSteps
+ );
- solver.solve();
+ solver.solve();
- return solver.getSol();
+ return solver.getSol();
}
template <int dim, class ctype, class LocalFiniteElement, class TargetSpace>
@@ -215,11 +215,11 @@ typename LocalGeodesicFEFunction<dim,ctype,LocalFiniteElement,TargetSpace>::Deri
LocalGeodesicFEFunction<dim,ctype,LocalFiniteElement,TargetSpace>::
evaluateDerivative(const Dune::FieldVector<ctype, dim>& local) const
{
- // the function value at the point where we are evaluating the derivative
- TargetSpace q = evaluate(local);
+ // the function value at the point where we are evaluating the derivative
+ TargetSpace q = evaluate(local);
- // Actually compute the derivative
- return evaluateDerivative(local,q);
+ // Actually compute the derivative
+ return evaluateDerivative(local,q);
}
template <int dim, class ctype, class LocalFiniteElement, class TargetSpace>
@@ -227,79 +227,79 @@ typename LocalGeodesicFEFunction<dim,ctype,LocalFiniteElement,TargetSpace>::Deri
LocalGeodesicFEFunction<dim,ctype,LocalFiniteElement,TargetSpace>::
evaluateDerivative(const Dune::FieldVector<ctype, dim>& local, const TargetSpace& q) const
{
- Dune::FieldMatrix<RT, embeddedDim, dim> result;
+ Dune::FieldMatrix<RT, embeddedDim, dim> result;
#if 0 // this is probably faster than the general implementation, but we leave it out for testing purposes
- if (dim==1) {
+ if (dim==1) {
- EmbeddedTangentVector tmp = TargetSpace::interpolateDerivative(coefficients_[0], coefficients_[1], local[0]);
+ EmbeddedTangentVector tmp = TargetSpace::interpolateDerivative(coefficients_[0], coefficients_[1], local[0]);
- for (int i=0; i<embeddedDim; i++)
- result[i][0] = tmp[i];
+ for (int i=0; i<embeddedDim; i++)
+ result[i][0] = tmp[i];
- }
+ }
#endif
- // ////////////////////////////////////////////////////////////////////////
- // The derivative is evaluated using the implicit function theorem.
- // Hence we need to solve a small system of linear equations.
- // ////////////////////////////////////////////////////////////////////////
-
- // the matrix that turns coordinates on the reference simplex into coordinates on the standard simplex
- std::vector<Dune::FieldMatrix<ctype,1,dim> > B(coefficients_.size());
- localFiniteElement_.localBasis().evaluateJacobian(local, B);
-
- // compute negative derivative of F(w,q) (the derivative of the weighted distance fctl) wrt to w
- Dune::Matrix<RT> dFdw = computeDFdw(q);
- dFdw *= -1;
-
- // multiply the two previous matrices: the result is the right hand side
- // RHS = dFdw * B;
- // We need to write this multiplication by hand, because B is actually an (#coefficients) times 1 times dim matrix,
- // and we need to ignore the middle index.
- Dune::Matrix<RT> RHS(dFdw.N(), dim);
-
- for (size_t i=0; i<RHS.N(); i++)
- for (size_t j=0; j<RHS.M(); j++) {
- RHS[i][j] = 0;
- for (size_t k=0; k<dFdw.M(); k++)
- RHS[i][j] += dFdw[i][k]*B[k][0][j];
- }
+ // ////////////////////////////////////////////////////////////////////////
+ // The derivative is evaluated using the implicit function theorem.
+ // Hence we need to solve a small system of linear equations.
+ // ////////////////////////////////////////////////////////////////////////
+
+ // the matrix that turns coordinates on the reference simplex into coordinates on the standard simplex
+ std::vector<Dune::FieldMatrix<ctype,1,dim> > B(coefficients_.size());
+ localFiniteElement_.localBasis().evaluateJacobian(local, B);
+
+ // compute negative derivative of F(w,q) (the derivative of the weighted distance fctl) wrt to w
+ Dune::Matrix<RT> dFdw = computeDFdw(q);
+ dFdw *= -1;
+
+ // multiply the two previous matrices: the result is the right hand side
+ // RHS = dFdw * B;
+ // We need to write this multiplication by hand, because B is actually an (#coefficients) times 1 times dim matrix,
+ // and we need to ignore the middle index.
+ Dune::Matrix<RT> RHS(dFdw.N(), dim);
+
+ for (size_t i=0; i<RHS.N(); i++)
+ for (size_t j=0; j<RHS.M(); j++) {
+ RHS[i][j] = 0;
+ for (size_t k=0; k<dFdw.M(); k++)
+ RHS[i][j] += dFdw[i][k]*B[k][0][j];
+ }
- // the actual system matrix
- std::vector<Dune::FieldVector<ctype,1> > w;
- localFiniteElement_.localBasis().evaluateFunction(local, w);
+ // the actual system matrix
+ std::vector<Dune::FieldVector<ctype,1> > w;
+ localFiniteElement_.localBasis().evaluateFunction(local, w);
- AverageDistanceAssembler<TargetSpace> assembler(coefficients_, w);
+ AverageDistanceAssembler<TargetSpace> assembler(coefficients_, w);
- Dune::SymmetricMatrix<RT,embeddedDim> dFdq;
- assembler.assembleEmbeddedHessian(q,dFdq);
+ Dune::SymmetricMatrix<RT,embeddedDim> dFdq;
+ assembler.assembleEmbeddedHessian(q,dFdq);
- // We want to solve
- // dFdq * x = rhs
- // We use the Gram-Schmidt solver because we know that dFdq is rank-deficient.
+ // We want to solve
+ // dFdq * x = rhs
+ // We use the Gram-Schmidt solver because we know that dFdq is rank-deficient.
- const int shortDim = TargetSpace::TangentVector::dimension;
+ const int shortDim = TargetSpace::TangentVector::dimension;
- // the orthonormal frame
- Dune::FieldMatrix<RT,shortDim,embeddedDim> basis = q.orthonormalFrame();
- GramSchmidtSolver<RT,shortDim,embeddedDim> gramSchmidtSolver(dFdq, basis);
+ // the orthonormal frame
+ Dune::FieldMatrix<RT,shortDim,embeddedDim> basis = q.orthonormalFrame();
+ GramSchmidtSolver<RT,shortDim,embeddedDim> gramSchmidtSolver(dFdq, basis);
- for (int i=0; i<dim; i++) {
+ for (int i=0; i<dim; i++) {
- Dune::FieldVector<RT,embeddedDim> rhs;
- for (int j=0; j<embeddedDim; j++)
- rhs[j] = RHS[j][i];
+ Dune::FieldVector<RT,embeddedDim> rhs;
+ for (int j=0; j<embeddedDim; j++)
+ rhs[j] = RHS[j][i];
- Dune::FieldVector<RT,embeddedDim> x;
- gramSchmidtSolver.solve(x, rhs);
+ Dune::FieldVector<RT,embeddedDim> x;
+ gramSchmidtSolver.solve(x, rhs);
- for (int j=0; j<embeddedDim; j++)
- result[j][i] = x[j];
+ for (int j=0; j<embeddedDim; j++)
+ result[j][i] = x[j];
- }
+ }
- return result;
+ return result;
}
template <int dim, class ctype, class LocalFiniteElement, class TargetSpace>
@@ -308,48 +308,48 @@ evaluateDerivativeOfValueWRTCoefficient(const Dune::FieldVector<ctype, dim>& loc
int coefficient,
Dune::FieldMatrix<RT,embeddedDim,embeddedDim>& result) const
{
- // the function value at the point where we are evaluating the derivative
- TargetSpace q = evaluate(local);
+ // the function value at the point where we are evaluating the derivative
+ TargetSpace q = evaluate(local);
- // dFdq
- std::vector<Dune::FieldVector<ctype,1> > w;
- localFiniteElement_.localBasis().evaluateFunction(local,w);
+ // dFdq
+ std::vector<Dune::FieldVector<ctype,1> > w;
+ localFiniteElement_.localBasis().evaluateFunction(local,w);
- AverageDistanceAssembler<TargetSpace> assembler(coefficients_, w);
+ AverageDistanceAssembler<TargetSpace> assembler(coefficients_, w);
- Dune::SymmetricMatrix<RT,embeddedDim> dFdq;
- assembler.assembleEmbeddedHessian(q,dFdq);
+ Dune::SymmetricMatrix<RT,embeddedDim> dFdq;
+ assembler.assembleEmbeddedHessian(q,dFdq);
- const int shortDim = TargetSpace::TangentVector::dimension;
+ const int shortDim = TargetSpace::TangentVector::dimension;
- // the orthonormal frame
- Dune::FieldMatrix<RT,shortDim,embeddedDim> O = q.orthonormalFrame();
+ // the orthonormal frame
+ Dune::FieldMatrix<RT,shortDim,embeddedDim> O = q.orthonormalFrame();
- // compute A = O dFDq O^T
- Dune::FieldMatrix<RT,shortDim,shortDim> A;
- for (int i=0; i<shortDim; i++)
- for (int j=0; j<shortDim; j++) {
- A[i][j] = 0;
- for (int k=0; k<embeddedDim; k++)
- for (int l=0; l<embeddedDim; l++)
- A[i][j] += O[i][k] * ((k>=l) ? dFdq(k,l) : dFdq(l,k)) * O[j][l];
- }
+ // compute A = O dFDq O^T
+ Dune::FieldMatrix<RT,shortDim,shortDim> A;
+ for (int i=0; i<shortDim; i++)
+ for (int j=0; j<shortDim; j++) {
+ A[i][j] = 0;
+ for (int k=0; k<embeddedDim; k++)
+ for (int l=0; l<embeddedDim; l++)
+ A[i][j] += O[i][k] * ((k>=l) ? dFdq(k,l) : dFdq(l,k)) * O[j][l];
+ }
- //
- Dune::FieldMatrix<RT,embeddedDim,embeddedDim> rhs = TargetSpace::secondDerivativeOfDistanceSquaredWRTFirstAndSecondArgument(coefficients_[coefficient], q);
- rhs *= -w[coefficient];
+ //
+ Dune::FieldMatrix<RT,embeddedDim,embeddedDim> rhs = TargetSpace::secondDerivativeOfDistanceSquaredWRTFirstAndSecondArgument(coefficients_[coefficient], q);
+ rhs *= -w[coefficient];
- for (int i=0; i<embeddedDim; i++) {
+ for (int i=0; i<embeddedDim; i++) {
- Dune::FieldVector<RT,shortDim> shortRhs;
- O.mv(rhs[i],shortRhs);
+ Dune::FieldVector<RT,shortDim> shortRhs;
+ O.mv(rhs[i],shortRhs);
- Dune::FieldVector<RT,shortDim> shortX;
- A.solve(shortX,shortRhs);
+ Dune::FieldVector<RT,shortDim> shortX;
+ A.solve(shortX,shortRhs);
- O.mtv(shortX,result[i]);
+ O.mtv(shortX,result[i]);
- }
+ }
}
@@ -359,44 +359,44 @@ evaluateFDDerivativeOfValueWRTCoefficient(const Dune::FieldVector<ctype, dim>& l
int coefficient,
Dune::FieldMatrix<RT,embeddedDim,embeddedDim>& result) const
{
- double eps = 1e-6;
+ double eps = 1e-6;
- // the function value at the point where we are evaluating the derivative
- const Dune::FieldMatrix<RT,spaceDim,embeddedDim> B = coefficients_[coefficient].orthonormalFrame();
+ // the function value at the point where we are evaluating the derivative
+ const Dune::FieldMatrix<RT,spaceDim,embeddedDim> B = coefficients_[coefficient].orthonormalFrame();
- Dune::FieldMatrix<RT,spaceDim,embeddedDim> interimResult;
+ Dune::FieldMatrix<RT,spaceDim,embeddedDim> interimResult;
- std::vector<TargetSpace> cornersPlus = coefficients_;
- std::vector<TargetSpace> cornersMinus = coefficients_;
+ std::vector<TargetSpace> cornersPlus = coefficients_;
+ std::vector<TargetSpace> cornersMinus = coefficients_;
- for (int j=0; j<spaceDim; j++) {
+ for (int j=0; j<spaceDim; j++) {
- typename TargetSpace::EmbeddedTangentVector forwardVariation = B[j];
- forwardVariation *= eps;
- typename TargetSpace::EmbeddedTangentVector backwardVariation = B[j];
- backwardVariation *= -eps;
+ typename TargetSpace::EmbeddedTangentVector forwardVariation = B[j];
+ forwardVariation *= eps;
+ typename TargetSpace::EmbeddedTangentVector backwardVariation = B[j];
+ backwardVariation *= -eps;
- cornersPlus [coefficient] = TargetSpace::exp(coefficients_[coefficient], forwardVariation);
- cornersMinus[coefficient] = TargetSpace::exp(coefficients_[coefficient], backwardVariation);
+ cornersPlus [coefficient] = TargetSpace::exp(coefficients_[coefficient], forwardVariation);
+ cornersMinus[coefficient] = TargetSpace::exp(coefficients_[coefficient], backwardVariation);
- LocalGeodesicFEFunction<dim,ctype,LocalFiniteElement,TargetSpace> fPlus(localFiniteElement_,cornersPlus);
- LocalGeodesicFEFunction<dim,ctype,LocalFiniteElement,TargetSpace> fMinus(localFiniteElement_,cornersMinus);
+ LocalGeodesicFEFunction<dim,ctype,LocalFiniteElement,TargetSpace> fPlus(localFiniteElement_,cornersPlus);
+ LocalGeodesicFEFunction<dim,ctype,LocalFiniteElement,TargetSpace> fMinus(localFiniteElement_,cornersMinus);
- TargetSpace hPlus = fPlus.evaluate(local);
- TargetSpace hMinus = fMinus.evaluate(local);
+ TargetSpace hPlus = fPlus.evaluate(local);
+ TargetSpace hMinus = fMinus.evaluate(local);
- interimResult[j] = hPlus.globalCoordinates();
- interimResult[j] -= hMinus.globalCoordinates();
- interimResult[j] /= 2*eps;
+ interimResult[j] = hPlus.globalCoordinates();
+ interimResult[j] -= hMinus.globalCoordinates();
+ interimResult[j] /= 2*eps;
- }
+ }
- for (int i=0; i<embeddedDim; i++)
- for (int j=0; j<embeddedDim; j++) {
- result[i][j] = 0;
- for (int k=0; k<spaceDim; k++)
- result[i][j] += B[k][i]*interimResult[k][j];
- }
+ for (int i=0; i<embeddedDim; i++)
+ for (int j=0; j<embeddedDim; j++) {
+ result[i][j] = 0;
+ for (int k=0; k<spaceDim; k++)
+ result[i][j] += B[k][i]*interimResult[k][j];
+ }
}
@@ -407,93 +407,93 @@ evaluateDerivativeOfGradientWRTCoefficient(const Dune::FieldVector<ctype, dim>&
int coefficient,
DerivativeOfGradientWRTCoefficientType& result) const
{
- // the function value at the point where we are evaluating the derivative
- TargetSpace q = evaluate(local);
-
- // the matrix that turns coordinates on the reference simplex into coordinates on the standard simplex
- std::vector<Dune::FieldMatrix<ctype,1,dim> > BNested(coefficients_.size());
- localFiniteElement_.localBasis().evaluateJacobian(local, BNested);
- Dune::Matrix<RT> B(coefficients_.size(), dim);
- for (size_t i=0; i<coefficients_.size(); i++)
- for (size_t j=0; j<dim; j++)
- B[i][j] = BNested[i][0][j];
-
- // the actual system matrix
- std::vector<Dune::FieldVector<ctype,1> > w;
- localFiniteElement_.localBasis().evaluateFunction(local,w);
+ // the function value at the point where we are evaluating the derivative
+ TargetSpace q = evaluate(local);
- AverageDistanceAssembler<TargetSpace> assembler(coefficients_, w);
+ // the matrix that turns coordinates on the reference simplex into coordinates on the standard simplex
+ std::vector<Dune::FieldMatrix<ctype,1,dim> > BNested(coefficients_.size());
+ localFiniteElement_.localBasis().evaluateJacobian(local, BNested);
+ Dune::Matrix<RT> B(coefficients_.size(), dim);
+ for (size_t i=0; i<coefficients_.size(); i++)
+ for (size_t j=0; j<dim; j++)
+ B[i][j] = BNested[i][0][j];
- /** \todo Use a symmetric matrix here */
- Dune::SymmetricMatrix<RT,embeddedDim> dFdq;
- assembler.assembleEmbeddedHessian(q,dFdq);
+ // the actual system matrix
+ std::vector<Dune::FieldVector<ctype,1> > w;
+ localFiniteElement_.localBasis().evaluateFunction(local,w);
+ AverageDistanceAssembler<TargetSpace> assembler(coefficients_, w);
- Dune::FieldMatrix<RT,embeddedDim,embeddedDim> mixedDerivative = TargetSpace::secondDerivativeOfDistanceSquaredWRTFirstAndSecondArgument(coefficients_[coefficient], q);
- TensorSSD<RT,embeddedDim,embeddedDim> dvDwF(coefficients_.size());
- dvDwF = 0;
- for (int i=0; i<embeddedDim; i++)
- for (int j=0; j<embeddedDim; j++)
- dvDwF(i, j, coefficient) = mixedDerivative[i][j];
+ /** \todo Use a symmetric matrix here */
+ Dune::SymmetricMatrix<RT,embeddedDim> dFdq;
+ assembler.assembleEmbeddedHessian(q,dFdq);
- // dFDq is not invertible, if the target space is embedded into a higher-dimensional
- // Euclidean space. Therefore we use its pseudo inverse. I don't think that is the
- // best way, though.
- Dune::SymmetricMatrix<RT,embeddedDim> dFdqPseudoInv = pseudoInverse(dFdq,q);
+ Dune::FieldMatrix<RT,embeddedDim,embeddedDim> mixedDerivative = TargetSpace::secondDerivativeOfDistanceSquaredWRTFirstAndSecondArgument(coefficients_[coefficient], q);
+ TensorSSD<RT,embeddedDim,embeddedDim> dvDwF(coefficients_.size());
+ dvDwF = 0;
+ for (int i=0; i<embeddedDim; i++)
+ for (int j=0; j<embeddedDim; j++)
+ dvDwF(i, j, coefficient) = mixedDerivative[i][j];
- //
- Tensor3<RT,embeddedDim,embeddedDim,embeddedDim> dvDqF
- = TargetSpace::thirdDerivativeOfDistanceSquaredWRTFirst1AndSecond2Argument(coefficients_[coefficient], q);
- dvDqF = RT(w[coefficient]) * dvDqF;
+ // dFDq is not invertible, if the target space is embedded into a higher-dimensional
+ // Euclidean space. Therefore we use its pseudo inverse. I don't think that is the
+ // best way, though.
+ Dune::SymmetricMatrix<RT,embeddedDim> dFdqPseudoInv = pseudoInverse(dFdq,q);
- // Put it all together
- // dvq[i][j] = \partial q_j / \partial v_i
- Dune::FieldMatrix<RT,embeddedDim,embeddedDim> dvq;
- evaluateDerivativeOfValueWRTCoefficient(local,coefficient,dvq);
+ //
+ Tensor3<RT,embeddedDim,embeddedDim,embeddedDim> dvDqF
+ = TargetSpace::thirdDerivativeOfDistanceSquaredWRTFirst1AndSecond2Argument(coefficients_[coefficient], q);
- Dune::FieldMatrix<RT, embeddedDim, dim> derivative = evaluateDerivative(local);
+ dvDqF = RT(w[coefficient]) * dvDqF;
- Tensor3<RT, embeddedDim,embeddedDim,embeddedDim> dqdqF;
- dqdqF = computeDqDqF(w,q);
+ // Put it all together
+ // dvq[i][j] = \partial q_j / \partial v_i
+ Dune::FieldMatrix<RT,embeddedDim,embeddedDim> dvq;
+ evaluateDerivativeOfValueWRTCoefficient(local,coefficient,dvq);
- TensorSSD<RT, embeddedDim,embeddedDim> dqdwF(coefficients_.size());
+ Dune::FieldMatrix<RT, embeddedDim, dim> derivative = evaluateDerivative(local);
- for (size_t k=0; k<coefficients_.size(); k++) {
- Dune::SymmetricMatrix<RT,embeddedDim> hesse = TargetSpace::secondDerivativeOfDistanceSquaredWRTSecondArgument(coefficients_[k], q);
- for (int i=0; i<embeddedDim; i++)
- for (int j=0; j<=i; j++)
- dqdwF(i, j, k) = dqdwF(j, i, k) = hesse(i,j);
+ Tensor3<RT, embeddedDim,embeddedDim,embeddedDim> dqdqF;
+ dqdqF = computeDqDqF(w,q);
- }
+ TensorSSD<RT, embeddedDim,embeddedDim> dqdwF(coefficients_.size());
- TensorSSD<RT, embeddedDim,embeddedDim> dqdwF_times_dvq(coefficients_.size());
+ for (size_t k=0; k<coefficients_.size(); k++) {
+ Dune::SymmetricMatrix<RT,embeddedDim> hesse = TargetSpace::secondDerivativeOfDistanceSquaredWRTSecondArgument(coefficients_[k], q);
for (int i=0; i<embeddedDim; i++)
- for (int j=0; j<embeddedDim; j++)
- for (size_t k=0; k<coefficients_.size(); k++) {
- dqdwF_times_dvq(i, j, k) = 0;
- for (int l=0; l<embeddedDim; l++)
- dqdwF_times_dvq(i, j, k) += dqdwF(l, j, k) * dvq[i][l];
- }
-
- Tensor3<RT,embeddedDim,embeddedDim,dim> foo;
- foo = -1 * dvDqF*derivative - (dvq*dqdqF)*derivative;
- TensorSSD<RT,embeddedDim,embeddedDim> bar(dim);
- bar = dvDwF * B + dqdwF_times_dvq*B;
+ for (int j=0; j<=i; j++)
+ dqdwF(i, j, k) = dqdwF(j, i, k) = hesse(i,j);
+
+ }
+
+ TensorSSD<RT, embeddedDim,embeddedDim> dqdwF_times_dvq(coefficients_.size());
+ for (int i=0; i<embeddedDim; i++)
+ for (int j=0; j<embeddedDim; j++)
+ for (size_t k=0; k<coefficients_.size(); k++) {
+ dqdwF_times_dvq(i, j, k) = 0;
+ for (int l=0; l<embeddedDim; l++)
+ dqdwF_times_dvq(i, j, k) += dqdwF(l, j, k) * dvq[i][l];
+ }
- for (int i=0; i<embeddedDim; i++)
- for (int j=0; j<embeddedDim; j++)
- for (int k=0; k<dim; k++)
- foo[i][j][k] -= bar(i, j, k);
+ Tensor3<RT,embeddedDim,embeddedDim,dim> foo;
+ foo = -1 * dvDqF*derivative - (dvq*dqdqF)*derivative;
+ TensorSSD<RT,embeddedDim,embeddedDim> bar(dim);
+ bar = dvDwF * B + dqdwF_times_dvq*B;
- result = RT(0);
- for (int i=0; i<embeddedDim; i++)
- for (int j=0; j<embeddedDim; j++)
- for (int k=0; k<dim; k++)
- for (int l=0; l<embeddedDim; l++)
- // TODO Smarter implementation of the product with a symmetric matrix
- result[i][j][k] += ((j>=l) ? dFdqPseudoInv(j,l) : dFdqPseudoInv(l,j)) * foo[i][l][k];
+ for (int i=0; i<embeddedDim; i++)
+ for (int j=0; j<embeddedDim; j++)
+ for (int k=0; k<dim; k++)
+ foo[i][j][k] -= bar(i, j, k);
+
+ result = RT(0);
+ for (int i=0; i<embeddedDim; i++)
+ for (int j=0; j<embeddedDim; j++)
+ for (int k=0; k<dim; k++)
+ for (int l=0; l<embeddedDim; l++)
+ // TODO Smarter implementation of the product with a symmetric matrix
+ result[i][j][k] += ((j>=l) ? dFdqPseudoInv(j,l) : dFdqPseudoInv(l,j)) * foo[i][l][k];
}
@@ -501,52 +501,52 @@ evaluateDerivativeOfGradientWRTCoefficient(const Dune::FieldVector<ctype, dim>&
template <int dim, class ctype, class LocalFiniteElement, class TargetSpace>
void LocalGeodesicFEFunction<dim,ctype,LocalFiniteElement,TargetSpace>::
evaluateFDDerivativeOfGradientWRTCoefficient(const Dune::FieldVector<ctype, dim>& local,
- int coefficient,
- DerivativeOfGradientWRTCoefficientType& result) const
+ int coefficient,
+ DerivativeOfGradientWRTCoefficientType& result) const
{
- double eps = 1e-6;
+ double eps = 1e-6;
- // loop over the different partial derivatives
- for (int j=0; j<embeddedDim; j++) {
+ // loop over the different partial derivatives
+ for (int j=0; j<embeddedDim; j++) {
- std::vector<TargetSpace> cornersPlus = coefficients_;
- std::vector<TargetSpace> cornersMinus = coefficients_;
- typename TargetSpace::CoordinateType aPlus = coefficients_[coefficient].globalCoordinates();
- typename TargetSpace::CoordinateType aMinus = coefficients_[coefficient].globalCoordinates();
- aPlus[j] += eps;
- aMinus[j] -= eps;
- cornersPlus[coefficient] = TargetSpace(aPlus);
- cornersMinus[coefficient] = TargetSpace(aMinus);
- LocalGeodesicFEFunction<dim,ctype,LocalFiniteElement,TargetSpace> fPlus(localFiniteElement_,cornersPlus);
- LocalGeodesicFEFunction<dim,ctype,LocalFiniteElement,TargetSpace> fMinus(localFiniteElement_,cornersMinus);
+ std::vector<TargetSpace> cornersPlus = coefficients_;
+ std::vector<TargetSpace> cornersMinus = coefficients_;
+ typename TargetSpace::CoordinateType aPlus = coefficients_[coefficient].globalCoordinates();
+ typename TargetSpace::CoordinateType aMinus = coefficients_[coefficient].globalCoordinates();
+ aPlus[j] += eps;
+ aMinus[j] -= eps;
+ cornersPlus[coefficient] = TargetSpace(aPlus);
+ cornersMinus[coefficient] = TargetSpace(aMinus);
+ LocalGeodesicFEFunction<dim,ctype,LocalFiniteElement,TargetSpace> fPlus(localFiniteElement_,cornersPlus);
+ LocalGeodesicFEFunction<dim,ctype,LocalFiniteElement,TargetSpace> fMinus(localFiniteElement_,cornersMinus);
- Dune::FieldMatrix<RT,embeddedDim,dim> hPlus = fPlus.evaluateDerivative(local);
- Dune::FieldMatrix<RT,embeddedDim,dim> hMinus = fMinus.evaluateDerivative(local);
+ Dune::FieldMatrix<RT,embeddedDim,dim> hPlus = fPlus.evaluateDerivative(local);
+ Dune::FieldMatrix<RT,embeddedDim,dim> hMinus = fMinus.evaluateDerivative(local);
- result[j] = hPlus;
- result[j] -= hMinus;
- result[j] /= 2*eps;
+ result[j] = hPlus;
+ result[j] -= hMinus;
+ result[j] /= 2*eps;
- }
+ }
- for (int j=0; j<embeddedDim; j++) {
-
- TargetSpace q = evaluate(local);
- Dune::FieldVector<RT,embeddedDim> foo;
- for (int l=0; l<dim; l++) {
+ for (int j=0; j<embeddedDim; j++) {
- for (int k=0; k<embeddedDim; k++)
- foo[k] = result[j][k][l];
+ TargetSpace q = evaluate(local);
+ Dune::FieldVector<RT,embeddedDim> foo;
+ for (int l=0; l<dim; l++) {
- foo = q.projectOntoTangentSpace(foo);
+ for (int k=0; k<embeddedDim; k++)
+ foo[k] = result[j][k][l];
- for (int k=0; k<embeddedDim; k++)
- result[j][k][l] = foo[k];
+ foo = q.projectOntoTangentSpace(foo);
- }
+ for (int k=0; k<embeddedDim; k++)
+ result[j][k][l] = foo[k];
}
+ }
+
}
@@ -556,233 +556,233 @@ evaluateFDDerivativeOfGradientWRTCoefficient(const Dune::FieldVector<ctype, dim>
This is a specialization for speeding up the code.
We use that a RigidBodyMotion is a product manifold.
-\tparam dim Dimension of the reference element
-\tparam ctype Type used for coordinates on the reference element
-*/
+ \tparam dim Dimension of the reference element
+ \tparam ctype Type used for coordinates on the reference element
+ */
template <int dim, class ctype, class LocalFiniteElement, class field_type>
class LocalGeodesicFEFunction<dim,ctype,LocalFiniteElement,RigidBodyMotion<field_type,3> >
{
- typedef RigidBodyMotion<field_type,3> TargetSpace;
+ typedef RigidBodyMotion<field_type,3> TargetSpace;
- typedef typename TargetSpace::EmbeddedTangentVector EmbeddedTangentVector;
- static const int embeddedDim = EmbeddedTangentVector::dimension;
+ typedef typename TargetSpace::EmbeddedTangentVector EmbeddedTangentVector;
+ static const int embeddedDim = EmbeddedTangentVector::dimension;
- static const int spaceDim = TargetSpace::TangentVector::dimension;
+ static const int spaceDim = TargetSpace::TangentVector::dimension;
public:
- /** \brief The type used for derivatives */
- typedef Dune::FieldMatrix<field_type, embeddedDim, dim> DerivativeType;
+ /** \brief The type used for derivatives */
+ typedef Dune::FieldMatrix<field_type, embeddedDim, dim> DerivativeType;
- /** \brief The type used for derivatives of the gradient with respect to coefficients */
- typedef Tensor3<field_type,embeddedDim,embeddedDim,dim> DerivativeOfGradientWRTCoefficientType;
+ /** \brief The type used for derivatives of the gradient with respect to coefficients */
+ typedef Tensor3<field_type,embeddedDim,embeddedDim,dim> DerivativeOfGradientWRTCoefficientType;
- /** \brief Constructor */
- LocalGeodesicFEFunction(const LocalFiniteElement& localFiniteElement,
- const std::vector<TargetSpace>& coefficients)
+ /** \brief Constructor */
+ LocalGeodesicFEFunction(const LocalFiniteElement& localFiniteElement,
+ const std::vector<TargetSpace>& coefficients)
: localFiniteElement_(localFiniteElement),
- translationCoefficients_(coefficients.size())
- {
- assert(localFiniteElement.localBasis().size() == coefficients.size());
+ translationCoefficients_(coefficients.size())
+ {
+ assert(localFiniteElement.localBasis().size() == coefficients.size());
- for (size_t i=0; i<coefficients.size(); i++)
- translationCoefficients_[i] = coefficients[i].r;
+ for (size_t i=0; i<coefficients.size(); i++)
+ translationCoefficients_[i] = coefficients[i].r;
- std::vector<Rotation<field_type,3> > orientationCoefficients(coefficients.size());
- for (size_t i=0; i<coefficients.size(); i++)
- orientationCoefficients[i] = coefficients[i].q;
+ std::vector<Rotation<field_type,3> > orientationCoefficients(coefficients.size());
+ for (size_t i=0; i<coefficients.size(); i++)
+ orientationCoefficients[i] = coefficients[i].q;
- orientationFEFunction_ = std::unique_ptr<LocalGeodesicFEFunction<dim,ctype,LocalFiniteElement,Rotation<field_type,3> > > (new LocalGeodesicFEFunction<dim,ctype,LocalFiniteElement,Rotation<field_type,3> >(localFiniteElement,orientationCoefficients));
+ orientationFEFunction_ = std::unique_ptr<LocalGeodesicFEFunction<dim,ctype,LocalFiniteElement,Rotation<field_type,3> > > (new LocalGeodesicFEFunction<dim,ctype,LocalFiniteElement,Rotation<field_type,3> >(localFiniteElement,orientationCoefficients));
- }
+ }
- /** \brief Rebind the FEFunction to another TargetSpace */
- template<class U>
- struct rebind
- {
- using other = LocalGeodesicFEFunction<dim,ctype,LocalFiniteElement,U>;
- };
-
- /** \brief The number of Lagrange points */
- unsigned int size() const
- {
- return localFiniteElement_.localBasis().size();
- }
+ /** \brief Rebind the FEFunction to another TargetSpace */
+ template<class U>
+ struct rebind
+ {
+ using other = LocalGeodesicFEFunction<dim,ctype,LocalFiniteElement,U>;
+ };
- /** \brief The type of the reference element */
- Dune::GeometryType type() const
- {
- return localFiniteElement_.type();
- }
+ /** \brief The number of Lagrange points */
+ unsigned int size() const
+ {
+ return localFiniteElement_.localBasis().size();
+ }
- /** \brief Evaluate the function */
- TargetSpace evaluate(const Dune::FieldVector<ctype, dim>& local) const
- {
- TargetSpace result;
+ /** \brief The type of the reference element */
+ Dune::GeometryType type() const
+ {
+ return localFiniteElement_.type();
+ }
- // Evaluate the weighting factors---these are the Lagrangian shape function values at 'local'
- std::vector<Dune::FieldVector<ctype,1> > w;
- localFiniteElement_.localBasis().evaluateFunction(local,w);
+ /** \brief Evaluate the function */
+ TargetSpace evaluate(const Dune::FieldVector<ctype, dim>& local) const
+ {
+ TargetSpace result;
- result.r = 0;
- for (size_t i=0; i<w.size(); i++)
- result.r.axpy(w[i][0], translationCoefficients_[i]);
+ // Evaluate the weighting factors---these are the Lagrangian shape function values at 'local'
+ std::vector<Dune::FieldVector<ctype,1> > w;
+ localFiniteElement_.localBasis().evaluateFunction(local,w);
- result.q = orientationFEFunction_->evaluate(local);
- return result;
- }
+ result.r = 0;
+ for (size_t i=0; i<w.size(); i++)
+ result.r.axpy(w[i][0], translationCoefficients_[i]);
- /** \brief Evaluate the derivative of the function */
- DerivativeType evaluateDerivative(const Dune::FieldVector<ctype, dim>& local) const
- {
- DerivativeType result(0);
+ result.q = orientationFEFunction_->evaluate(local);
+ return result;
+ }
- // get translation part
- std::vector<Dune::FieldMatrix<ctype,1,dim> > sfDer(translationCoefficients_.size());
- localFiniteElement_.localBasis().evaluateJacobian(local, sfDer);
+ /** \brief Evaluate the derivative of the function */
+ DerivativeType evaluateDerivative(const Dune::FieldVector<ctype, dim>& local) const
+ {
+ DerivativeType result(0);
- for (size_t i=0; i<translationCoefficients_.size(); i++)
- for (int j=0; j<3; j++)
- result[j].axpy(translationCoefficients_[i][j], sfDer[i][0]);
+ // get translation part
+ std::vector<Dune::FieldMatrix<ctype,1,dim> > sfDer(translationCoefficients_.size());
+ localFiniteElement_.localBasis().evaluateJacobian(local, sfDer);
- // get orientation part
- Dune::FieldMatrix<field_type,4,dim> qResult = orientationFEFunction_->evaluateDerivative(local);
- for (int i=0; i<4; i++)
- for (int j=0; j<dim; j++)
- result[3+i][j] = qResult[i][j];
+ for (size_t i=0; i<translationCoefficients_.size(); i++)
+ for (int j=0; j<3; j++)
+ result[j].axpy(translationCoefficients_[i][j], sfDer[i][0]);
- return result;
- }
+ // get orientation part
+ Dune::FieldMatrix<field_type,4,dim> qResult = orientationFEFunction_->evaluateDerivative(local);
+ for (int i=0; i<4; i++)
+ for (int j=0; j<dim; j++)
+ result[3+i][j] = qResult[i][j];
- /** \brief Evaluate the derivative of the function, if you happen to know the function value (much faster!)
- \param local Local coordinates in the reference element where to evaluate the derivative
- \param q Value of the local gfe function at 'local'. If you provide something wrong here the result will be wrong, too!
- */
- DerivativeType evaluateDerivative(const Dune::FieldVector<ctype, dim>& local,
- const TargetSpace& q) const
- {
- DerivativeType result(0);
-
- // get translation part
- std::vector<Dune::FieldMatrix<ctype,1,dim> > sfDer(translationCoefficients_.size());
- localFiniteElement_.localBasis().evaluateJacobian(local, sfDer);
-
- for (size_t i=0; i<translationCoefficients_.size(); i++)
- for (int j=0; j<3; j++)
- result[j].axpy(translationCoefficients_[i][j], sfDer[i][0]);
-
- // get orientation part
- Dune::FieldMatrix<field_type,4,dim> qResult = orientationFEFunction_->evaluateDerivative(local,q.q);
- for (int i=0; i<4; i++)
- for (int j=0; j<dim; j++)
- result[3+i][j] = qResult[i][j];
-
- return result;
- }
+ return result;
+ }
+
+ /** \brief Evaluate the derivative of the function, if you happen to know the function value (much faster!)
+ \param local Local coordinates in the reference element where to evaluate the derivative
+ \param q Value of the local gfe function at 'local'. If you provide something wrong here the result will be wrong, too!
+ */
+ DerivativeType evaluateDerivative(const Dune::FieldVector<ctype, dim>& local,
+ const TargetSpace& q) const
+ {
+ DerivativeType result(0);
+
+ // get translation part
+ std::vector<Dune::FieldMatrix<ctype,1,dim> > sfDer(translationCoefficients_.size());
+ localFiniteElement_.localBasis().evaluateJacobian(local, sfDer);
+
+ for (size_t i=0; i<translationCoefficients_.size(); i++)
+ for (int j=0; j<3; j++)
+ result[j].axpy(translationCoefficients_[i][j], sfDer[i][0]);
+
+ // get orientation part
+ Dune::FieldMatrix<field_type,4,dim> qResult = orientationFEFunction_->evaluateDerivative(local,q.q);
+ for (int i=0; i<4; i++)
+ for (int j=0; j<dim; j++)
+ result[3+i][j] = qResult[i][j];
- /** \brief Evaluate the derivative of the function value with respect to a coefficient */
- void evaluateDerivativeOfValueWRTCoefficient(const Dune::FieldVector<ctype, dim>& local,
- int coefficient,
- Dune::FieldMatrix<field_type,embeddedDim,embeddedDim>& derivative) const
- {
- derivative = 0;
-
- // Translation part
- std::vector<Dune::FieldVector<ctype,1> > w;
- localFiniteElement_.localBasis().evaluateFunction(local,w);
- for (int i=0; i<3; i++)
- derivative[i][i] = w[coefficient];
-
- // Rotation part
- Dune::FieldMatrix<field_type,4,4> qDerivative;
- orientationFEFunction_->evaluateDerivativeOfValueWRTCoefficient(local,coefficient,qDerivative);
- for (int i=0; i<4; i++)
- for (int j=0; j<4; j++)
- derivative[3+i][3+j] = qDerivative[i][j];
- }
+ return result;
+ }
+
+ /** \brief Evaluate the derivative of the function value with respect to a coefficient */
+ void evaluateDerivativeOfValueWRTCoefficient(const Dune::FieldVector<ctype, dim>& local,
+ int coefficient,
+ Dune::FieldMatrix<field_type,embeddedDim,embeddedDim>& derivative) const
+ {
+ derivative = 0;
- /** \brief Evaluate the derivative of the function value with respect to a coefficient */
- void evaluateFDDerivativeOfValueWRTCoefficient(const Dune::FieldVector<ctype, dim>& local,
+ // Translation part
+ std::vector<Dune::FieldVector<ctype,1> > w;
+ localFiniteElement_.localBasis().evaluateFunction(local,w);
+ for (int i=0; i<3; i++)
+ derivative[i][i] = w[coefficient];
+
+ // Rotation part
+ Dune::FieldMatrix<field_type,4,4> qDerivative;
+ orientationFEFunction_->evaluateDerivativeOfValueWRTCoefficient(local,coefficient,qDerivative);
+ for (int i=0; i<4; i++)
+ for (int j=0; j<4; j++)
+ derivative[3+i][3+j] = qDerivative[i][j];
+ }
+
+ /** \brief Evaluate the derivative of the function value with respect to a coefficient */
+ void evaluateFDDerivativeOfValueWRTCoefficient(const Dune::FieldVector<ctype, dim>& local,
int coefficient,
Dune::FieldMatrix<field_type,embeddedDim,embeddedDim>& derivative) const
- {
- derivative = 0;
-
- // Translation part
- std::vector<Dune::FieldVector<ctype,1> > w;
- localFiniteElement_.localBasis().evaluateFunction(local,w);
- for (int i=0; i<3; i++)
- derivative[i][i] = w[coefficient];
-
- // Rotation part
- Dune::FieldMatrix<ctype,4,4> qDerivative;
- orientationFEFunction_->evaluateFDDerivativeOfValueWRTCoefficient(local,coefficient,qDerivative);
- for (int i=0; i<4; i++)
- for (int j=0; j<4; j++)
- derivative[3+i][3+j] = qDerivative[i][j];
- }
-
- /** \brief Evaluate the derivative of the gradient of the function with respect to a coefficient */
- void evaluateDerivativeOfGradientWRTCoefficient(const Dune::FieldVector<ctype, dim>& local,
- int coefficient,
- DerivativeOfGradientWRTCoefficientType& derivative) const
- {
- derivative = field_type(0);
-
- // Translation part
- std::vector<Dune::FieldMatrix<ctype,1,dim> > w;
- localFiniteElement_.localBasis().evaluateJacobian(local,w);
- for (int i=0; i<3; i++)
- derivative[i][i] = w[coefficient][0];
-
- // Rotation part
- Tensor3<field_type,4,4,dim> qDerivative;
- orientationFEFunction_->evaluateDerivativeOfGradientWRTCoefficient(local,coefficient,qDerivative);
- for (int i=0; i<4; i++)
- for (int j=0; j<4; j++)
- for (int k=0; k<dim; k++)
- derivative[3+i][3+j][k] = qDerivative[i][j][k];
- }
+ {
+ derivative = 0;
- /** \brief Evaluate the derivative of the gradient of the function with respect to a coefficient */
- void evaluateFDDerivativeOfGradientWRTCoefficient(const Dune::FieldVector<ctype, dim>& local,
+ // Translation part
+ std::vector<Dune::FieldVector<ctype,1> > w;
+ localFiniteElement_.localBasis().evaluateFunction(local,w);
+ for (int i=0; i<3; i++)
+ derivative[i][i] = w[coefficient];
+
+ // Rotation part
+ Dune::FieldMatrix<ctype,4,4> qDerivative;
+ orientationFEFunction_->evaluateFDDerivativeOfValueWRTCoefficient(local,coefficient,qDerivative);
+ for (int i=0; i<4; i++)
+ for (int j=0; j<4; j++)
+ derivative[3+i][3+j] = qDerivative[i][j];
+ }
+
+ /** \brief Evaluate the derivative of the gradient of the function with respect to a coefficient */
+ void evaluateDerivativeOfGradientWRTCoefficient(const Dune::FieldVector<ctype, dim>& local,
+ int coefficient,
+ DerivativeOfGradientWRTCoefficientType& derivative) const
+ {
+ derivative = field_type(0);
+
+ // Translation part
+ std::vector<Dune::FieldMatrix<ctype,1,dim> > w;
+ localFiniteElement_.localBasis().evaluateJacobian(local,w);
+ for (int i=0; i<3; i++)
+ derivative[i][i] = w[coefficient][0];
+
+ // Rotation part
+ Tensor3<field_type,4,4,dim> qDerivative;
+ orientationFEFunction_->evaluateDerivativeOfGradientWRTCoefficient(local,coefficient,qDerivative);
+ for (int i=0; i<4; i++)
+ for (int j=0; j<4; j++)
+ for (int k=0; k<dim; k++)
+ derivative[3+i][3+j][k] = qDerivative[i][j][k];
+ }
+
+ /** \brief Evaluate the derivative of the gradient of the function with respect to a coefficient */
+ void evaluateFDDerivativeOfGradientWRTCoefficient(const Dune::FieldVector<ctype, dim>& local,
int coefficient,
DerivativeOfGradientWRTCoefficientType& derivative) const
- {
- derivative = 0;
-
- // Translation part
- std::vector<Dune::FieldMatrix<ctype,1,dim> > w;
- localFiniteElement_.localBasis().evaluateJacobian(local,w);
- for (int i=0; i<3; i++)
- derivative[i][i] = w[coefficient][0];
-
- // Rotation part
- Tensor3<ctype,4,4,dim> qDerivative;
- orientationFEFunction_->evaluateFDDerivativeOfGradientWRTCoefficient(local,coefficient,qDerivative);
- for (int i=0; i<4; i++)
- for (int j=0; j<4; j++)
- for (int k=0; k<dim; k++)
- derivative[3+i][3+j][k] = qDerivative[i][j][k];
- }
-
- TargetSpace coefficient(int i) const {
- return TargetSpace(translationCoefficients_[i],orientationFEFunction_->coefficient(i));
-
- }
+ {
+ derivative = 0;
+
+ // Translation part
+ std::vector<Dune::FieldMatrix<ctype,1,dim> > w;
+ localFiniteElement_.localBasis().evaluateJacobian(local,w);
+ for (int i=0; i<3; i++)
+ derivative[i][i] = w[coefficient][0];
+
+ // Rotation part
+ Tensor3<ctype,4,4,dim> qDerivative;
+ orientationFEFunction_->evaluateFDDerivativeOfGradientWRTCoefficient(local,coefficient,qDerivative);
+ for (int i=0; i<4; i++)
+ for (int j=0; j<4; j++)
+ for (int k=0; k<dim; k++)
+ derivative[3+i][3+j][k] = qDerivative[i][j][k];
+ }
+
+ TargetSpace coefficient(int i) const {
+ return TargetSpace(translationCoefficients_[i],orientationFEFunction_->coefficient(i));
+
+ }
private:
- /** \brief The scalar local finite element, which provides the weighting factors
- \todo We really only need the local basis
- */
- const LocalFiniteElement& localFiniteElement_;
+ /** \brief The scalar local finite element, which provides the weighting factors
+ \todo We really only need the local basis
+ */
+ const LocalFiniteElement& localFiniteElement_;
- // The two factors of a RigidBodyMotion
- //LocalGeodesicFEFunction<dim,ctype,RealTuple<3> > translationFEFunction_;
+ // The two factors of a RigidBodyMotion
+ //LocalGeodesicFEFunction<dim,ctype,RealTuple<3> > translationFEFunction_;
- std::vector<Dune::FieldVector<field_type,3> > translationCoefficients_;
+ std::vector<Dune::FieldVector<field_type,3> > translationCoefficients_;
- std::unique_ptr<LocalGeodesicFEFunction<dim,ctype,LocalFiniteElement,Rotation<field_type,3> > > orientationFEFunction_;
+ std::unique_ptr<LocalGeodesicFEFunction<dim,ctype,LocalFiniteElement,Rotation<field_type,3> > > orientationFEFunction_;
};
diff --git a/dune/gfe/localgfetestfunctionbasis.hh b/dune/gfe/localgfetestfunctionbasis.hh
index b1968e0e..947f445e 100644
--- a/dune/gfe/localgfetestfunctionbasis.hh
+++ b/dune/gfe/localgfetestfunctionbasis.hh
@@ -29,64 +29,64 @@ class LocalGfeTestFunctionInterpolation;
template <class LagrangeLfe, class TargetSpace>
class LocalGfeTestFunctionFiniteElement
{
- typedef typename LagrangeLfe::Traits::LocalBasisType::Traits LagrangeBasisTraits;
- typedef LocalGfeTestFunctionBasis<LagrangeLfe, TargetSpace> LocalBasis;
- typedef LocalGfeTestFunctionInterpolation<LagrangeLfe, TargetSpace> LocalInterpolation;
+ typedef typename LagrangeLfe::Traits::LocalBasisType::Traits LagrangeBasisTraits;
+ typedef LocalGfeTestFunctionBasis<LagrangeLfe, TargetSpace> LocalBasis;
+ typedef LocalGfeTestFunctionInterpolation<LagrangeLfe, TargetSpace> LocalInterpolation;
public:
- //! Traits
- typedef Dune::LocalFiniteElementTraits<LocalBasis,typename LagrangeLfe::Traits::LocalCoefficientsType, LocalInterpolation> Traits;
-
- /** Construct local finite element from the base coefficients and Lagrange local finite element.
- *
- * \param lfe - The Lagrange local finite element.
- * \param baseCoeff - The coefficients of the base points the tangent spaces live at.
- */
- LocalGfeTestFunctionFiniteElement(const LagrangeLfe& lfe, const std::vector<TargetSpace> baseCoeff) :
- baseCoeff_(baseCoeff),
- basis_(lfe, baseCoeff_),
- coefficients_(lfe.localCoefficients()),
- gt_(lfe.type())
- {}
-
- /** \brief Get reference to the local basis.*/
- const typename Traits::LocalBasisType& localBasis () const
- {
- return basis_;
- }
-
- /** \brief Get reference to the local coefficients. */
- const typename Traits::LocalCoefficientsType& localCoefficients () const
- {
- return coefficients_;
- }
-
- /** \brief Get reference to the local interpolation handler. */
- const typename Traits::LocalInterpolationType& localInterpolation () const
- {
- return interpolation_;
- }
-
- /** \brief Get the element type this finite element lives on. */
- Dune::GeometryType type () const
- {
- return gt_;
- }
-
- /** \brief Get base coefficients. */
- const std::vector<TargetSpace>& getBaseCoefficients() const {return baseCoeff_;}
+ //! Traits
+ typedef Dune::LocalFiniteElementTraits<LocalBasis,typename LagrangeLfe::Traits::LocalCoefficientsType, LocalInterpolation> Traits;
+
+ /** Construct local finite element from the base coefficients and Lagrange local finite element.
+ *
+ * \param lfe - The Lagrange local finite element.
+ * \param baseCoeff - The coefficients of the base points the tangent spaces live at.
+ */
+ LocalGfeTestFunctionFiniteElement(const LagrangeLfe& lfe, const std::vector<TargetSpace> baseCoeff) :
+ baseCoeff_(baseCoeff),
+ basis_(lfe, baseCoeff_),
+ coefficients_(lfe.localCoefficients()),
+ gt_(lfe.type())
+ {}
+
+ /** \brief Get reference to the local basis.*/
+ const typename Traits::LocalBasisType& localBasis () const
+ {
+ return basis_;
+ }
+
+ /** \brief Get reference to the local coefficients. */
+ const typename Traits::LocalCoefficientsType& localCoefficients () const
+ {
+ return coefficients_;
+ }
+
+ /** \brief Get reference to the local interpolation handler. */
+ const typename Traits::LocalInterpolationType& localInterpolation () const
+ {
+ return interpolation_;
+ }
+
+ /** \brief Get the element type this finite element lives on. */
+ Dune::GeometryType type () const
+ {
+ return gt_;
+ }
+
+ /** \brief Get base coefficients. */
+ const std::vector<TargetSpace>& getBaseCoefficients() const {return baseCoeff_;}
private:
- const std::vector<TargetSpace> baseCoeff_;
- LocalBasis basis_;
- const typename Traits::LocalCoefficientsType coefficients_;
- LocalInterpolation interpolation_;
- Dune::GeometryType gt_;
+ const std::vector<TargetSpace> baseCoeff_;
+ LocalBasis basis_;
+ const typename Traits::LocalCoefficientsType coefficients_;
+ LocalInterpolation interpolation_;
+ Dune::GeometryType gt_;
};
-/** \brief A local basis of the first variations of a given geodesic finite element function.
+/** \brief A local basis of the first variations of a given geodesic finite element function.
*
* \tparam LocalFiniteElement A Lagrangian finite element whose shape functions define the interpolation weights
* \tparam TargetSpace The manifold that the function takes its values in
@@ -97,109 +97,109 @@ private:
template <class LocalFiniteElement, class TargetSpace>
class LocalGfeTestFunctionBasis
{
- typedef typename LocalFiniteElement::Traits::LocalBasisType::Traits LagrangeBasisTraits;
- static const int dim = LagrangeBasisTraits::dimDomain;
- typedef typename LagrangeBasisTraits::DomainFieldType ctype;
- typedef typename TargetSpace::EmbeddedTangentVector EmbeddedTangentVector;
- static const int embeddedDim = EmbeddedTangentVector::dimension;
-
- static const int spaceDim = TargetSpace::TangentVector::dimension;
-
-public :
- //! The local basis traits
- typedef Dune::LocalBasisTraits<ctype, dim, Dune::FieldVector<ctype,dim>,
- typename EmbeddedTangentVector::value_type, embeddedDim, std::array<EmbeddedTangentVector,spaceDim>,
- std::array<Dune::FieldMatrix<ctype, embeddedDim, dim>,spaceDim>> Traits;
-
- /** \brief Constructor
- */
- LocalGfeTestFunctionBasis(const LocalFiniteElement& localFiniteElement,
- const std::vector<TargetSpace>& baseCoefficients)
- : localGFEFunction_(localFiniteElement, baseCoefficients)
- {}
-
- /** \brief The number of Lagrange points, NOT the number of basis functions */
- unsigned int size() const
- {
- return localGFEFunction_.size();
- }
-
- /** \brief Evaluate all shape functions at the given point */
- void evaluateFunction(const typename Traits::DomainType& local,
- std::vector<typename Traits::RangeType>& out) const;
+ typedef typename LocalFiniteElement::Traits::LocalBasisType::Traits LagrangeBasisTraits;
+ static const int dim = LagrangeBasisTraits::dimDomain;
+ typedef typename LagrangeBasisTraits::DomainFieldType ctype;
+ typedef typename TargetSpace::EmbeddedTangentVector EmbeddedTangentVector;
+ static const int embeddedDim = EmbeddedTangentVector::dimension;
- /** \brief Evaluate the derivatives of all shape functions function */
- void evaluateJacobian(const typename Traits::DomainType& local,
- std::vector<typename Traits::JacobianType>& out) const;
+ static const int spaceDim = TargetSpace::TangentVector::dimension;
- /** \brief Polynomial order */
- unsigned int order() const
- {
- return localGFEFunction_.localFiniteElement_.order();
- }
+public:
+ //! The local basis traits
+ typedef Dune::LocalBasisTraits<ctype, dim, Dune::FieldVector<ctype,dim>,
+ typename EmbeddedTangentVector::value_type, embeddedDim, std::array<EmbeddedTangentVector,spaceDim>,
+ std::array<Dune::FieldMatrix<ctype, embeddedDim, dim>,spaceDim> > Traits;
+
+ /** \brief Constructor
+ */
+ LocalGfeTestFunctionBasis(const LocalFiniteElement& localFiniteElement,
+ const std::vector<TargetSpace>& baseCoefficients)
+ : localGFEFunction_(localFiniteElement, baseCoefficients)
+ {}
+
+ /** \brief The number of Lagrange points, NOT the number of basis functions */
+ unsigned int size() const
+ {
+ return localGFEFunction_.size();
+ }
+
+ /** \brief Evaluate all shape functions at the given point */
+ void evaluateFunction(const typename Traits::DomainType& local,
+ std::vector<typename Traits::RangeType>& out) const;
+
+ /** \brief Evaluate the derivatives of all shape functions function */
+ void evaluateJacobian(const typename Traits::DomainType& local,
+ std::vector<typename Traits::JacobianType>& out) const;
+
+ /** \brief Polynomial order */
+ unsigned int order() const
+ {
+ return localGFEFunction_.localFiniteElement_.order();
+ }
private:
- /** \brief The scalar local finite element, which provides the weighting factors
- */
- const LocalGeodesicFEFunction<dim,ctype,LocalFiniteElement,TargetSpace> localGFEFunction_;
+ /** \brief The scalar local finite element, which provides the weighting factors
+ */
+ const LocalGeodesicFEFunction<dim,ctype,LocalFiniteElement,TargetSpace> localGFEFunction_;
};
template <class LocalFiniteElement, class TargetSpace>
void LocalGfeTestFunctionBasis<LocalFiniteElement,TargetSpace>::evaluateFunction(const typename Traits::DomainType& local,
- std::vector<typename Traits::RangeType>& out) const
+ std::vector<typename Traits::RangeType>& out) const
{
- out.resize(size());
-
- for (size_t i=0; i<size(); i++) {
-
- Dune::FieldMatrix< double, embeddedDim, embeddedDim > derivative;
-
- /** \todo This call internally keeps computing the value of the gfe function at 'local'.
- * This is expensive. Eventually we should precompute it once and reused the result. */
- localGFEFunction_.evaluateDerivativeOfValueWRTCoefficient (local, i, derivative);
- Dune::FieldMatrix<ctype,spaceDim,embeddedDim> basisVectors = localGFEFunction_.coefficient(i).orthonormalFrame();
-
- for (int j=0; j<spaceDim; j++)
- derivative.mv(basisVectors[j], out[i][j]);
-
- }
-
+ out.resize(size());
+
+ for (size_t i=0; i<size(); i++) {
+
+ Dune::FieldMatrix< double, embeddedDim, embeddedDim > derivative;
+
+ /** \todo This call internally keeps computing the value of the gfe function at 'local'.
+ * This is expensive. Eventually we should precompute it once and reused the result. */
+ localGFEFunction_.evaluateDerivativeOfValueWRTCoefficient (local, i, derivative);
+ Dune::FieldMatrix<ctype,spaceDim,embeddedDim> basisVectors = localGFEFunction_.coefficient(i).orthonormalFrame();
+
+ for (int j=0; j<spaceDim; j++)
+ derivative.mv(basisVectors[j], out[i][j]);
+
+ }
+
}
template <class LocalFiniteElement, class TargetSpace>
void LocalGfeTestFunctionBasis<LocalFiniteElement,TargetSpace>::evaluateJacobian(const typename Traits::DomainType& local,
- std::vector<typename Traits::JacobianType>& out) const
+ std::vector<typename Traits::JacobianType>& out) const
{
- out.resize(size());
-
- for (size_t i=0; i<size(); i++) {
-
- /** \todo This call internally keeps computing the value of the gfe function at 'local'.
- * This is expensive. Eventually we should precompute it once and reused the result. */
- Tensor3< double, embeddedDim, embeddedDim, dim > derivative;
- localGFEFunction_.evaluateDerivativeOfGradientWRTCoefficient (local, i, derivative);
-
- Dune::FieldMatrix<ctype,spaceDim,embeddedDim> basisVectors = localGFEFunction_.coefficient(i).orthonormalFrame();
-
- for (int j=0; j<spaceDim; j++) {
-
- out[i][j] = 0;
-
- // Contract the second index of the derivative with the tangent vector at the i-th Lagrange point.
- // Add that to the result.
- for (int k=0; k<embeddedDim; k++)
- for (int l=0; l<embeddedDim; l++)
- for (int m=0; m<dim; m++)
- out[i][j][k][m] += derivative[k][l][m] * basisVectors[j][l];
- }
+ out.resize(size());
+
+ for (size_t i=0; i<size(); i++) {
+
+ /** \todo This call internally keeps computing the value of the gfe function at 'local'.
+ * This is expensive. Eventually we should precompute it once and reused the result. */
+ Tensor3< double, embeddedDim, embeddedDim, dim > derivative;
+ localGFEFunction_.evaluateDerivativeOfGradientWRTCoefficient (local, i, derivative);
+
+ Dune::FieldMatrix<ctype,spaceDim,embeddedDim> basisVectors = localGFEFunction_.coefficient(i).orthonormalFrame();
+
+ for (int j=0; j<spaceDim; j++) {
+
+ out[i][j] = 0;
+
+ // Contract the second index of the derivative with the tangent vector at the i-th Lagrange point.
+ // Add that to the result.
+ for (int k=0; k<embeddedDim; k++)
+ for (int l=0; l<embeddedDim; l++)
+ for (int m=0; m<dim; m++)
+ out[i][j][k][m] += derivative[k][l][m] * basisVectors[j][l];
}
-
+ }
+
}
template <class LocalFiniteElement, class TargetSpace>
-class LocalGfeTestFunctionInterpolation
+class LocalGfeTestFunctionInterpolation
{};
#endif
diff --git a/dune/gfe/localprojectedfefunction.hh b/dune/gfe/localprojectedfefunction.hh
index 7551fbb9..46acb95a 100644
--- a/dune/gfe/localprojectedfefunction.hh
+++ b/dune/gfe/localprojectedfefunction.hh
@@ -52,8 +52,8 @@ namespace Dune {
*/
LocalProjectedFEFunction(const LocalFiniteElement& localFiniteElement,
const std::vector<TargetSpace>& coefficients)
- : localFiniteElement_(localFiniteElement),
- coefficients_(coefficients)
+ : localFiniteElement_(localFiniteElement),
+ coefficients_(coefficients)
{
assert(localFiniteElement_.localBasis().size() == coefficients_.size());
}
@@ -132,7 +132,7 @@ namespace Dune {
evaluateDerivative(const Dune::FieldVector<ctype, dim>& local) const
{
if constexpr(conformingFlag)
- {
+ {
// the function value at the point where we are evaluating the derivative
TargetSpace q = evaluate(local);
@@ -140,7 +140,7 @@ namespace Dune {
return evaluateDerivative(local, q);
}
else {
- std::vector<Dune::FieldMatrix<ctype, 1, dim>> wDer;
+ std::vector<Dune::FieldMatrix<ctype, 1, dim> > wDer;
localFiniteElement_.localBasis().evaluateJacobian(local, wDer);
Dune::FieldMatrix<RT, embeddedDim, dim> derivative(0);
@@ -209,7 +209,7 @@ namespace Dune {
* \param polar The image of the projection, i.e., the polar factor of A
*/
static std::array<std::array<FieldMatrix<field_type,3,3>, 3>, 3> derivativeOfProjection(const FieldMatrix<field_type,3,3>& A,
- FieldMatrix<field_type,3,3>& polar)
+ FieldMatrix<field_type,3,3>& polar)
{
std::array<std::array<FieldMatrix<field_type,3,3>, 3>, 3> result;
@@ -279,8 +279,8 @@ namespace Dune {
*/
LocalProjectedFEFunction(const LocalFiniteElement& localFiniteElement,
const std::vector<TargetSpace>& coefficients)
- : localFiniteElement_(localFiniteElement),
- coefficients_(coefficients)
+ : localFiniteElement_(localFiniteElement),
+ coefficients_(coefficients)
{
assert(localFiniteElement_.localBasis().size() == coefficients_.size());
}
@@ -437,17 +437,17 @@ namespace Dune {
*/
LocalProjectedFEFunction(const LocalFiniteElement& localFiniteElement,
const std::vector<TargetSpace>& coefficients)
- : localFiniteElement_(localFiniteElement),
+ : localFiniteElement_(localFiniteElement),
translationCoefficients_(coefficients.size())
{
assert(localFiniteElement.localBasis().size() == coefficients.size());
for (size_t i=0; i<coefficients.size(); i++)
- translationCoefficients_[i] = coefficients[i].r;
+ translationCoefficients_[i] = coefficients[i].r;
std::vector<Rotation<field_type,3> > orientationCoefficients(coefficients.size());
for (size_t i=0; i<coefficients.size(); i++)
- orientationCoefficients[i] = coefficients[i].q;
+ orientationCoefficients[i] = coefficients[i].q;
orientationFunction_ = std::make_unique<LocalProjectedFEFunction<dim,ctype,LocalFiniteElement,Rotation<field_type,3> > > (localFiniteElement,orientationCoefficients);
}
@@ -482,7 +482,7 @@ namespace Dune {
result.r = 0;
for (size_t i=0; i<w.size(); i++)
- result.r.axpy(w[i][0], translationCoefficients_[i]);
+ result.r.axpy(w[i][0], translationCoefficients_[i]);
result.q = orientationFunction_->evaluate(local);
@@ -513,15 +513,15 @@ namespace Dune {
localFiniteElement_.localBasis().evaluateJacobian(local, sfDer);
for (size_t i=0; i<translationCoefficients_.size(); i++)
- for (int j=0; j<3; j++)
- result[j].axpy(translationCoefficients_[i][j], sfDer[i][0]);
+ for (int j=0; j<3; j++)
+ result[j].axpy(translationCoefficients_[i][j], sfDer[i][0]);
// get orientation part
Dune::FieldMatrix<field_type,4,dim> qResult = orientationFunction_->evaluateDerivative(local,q.q);
for (int i=0; i<4; i++)
- for (int j=0; j<dim; j++)
- result[3+i][j] = qResult[i][j];
+ for (int j=0; j<dim; j++)
+ result[3+i][j] = qResult[i][j];
return result;
}
diff --git a/dune/gfe/localquickanddirtyfefunction.hh b/dune/gfe/localquickanddirtyfefunction.hh
index 34603132..76a8f105 100644
--- a/dune/gfe/localquickanddirtyfefunction.hh
+++ b/dune/gfe/localquickanddirtyfefunction.hh
@@ -53,9 +53,9 @@ namespace Dune {
* \param coefficients Values of the function at the Lagrange points
*/
LocalQuickAndDirtyFEFunction(const LocalFiniteElement& localFiniteElement,
- const std::vector<TargetSpace>& coefficients)
- : localFiniteElement_(localFiniteElement),
- coefficients_(coefficients)
+ const std::vector<TargetSpace>& coefficients)
+ : localFiniteElement_(localFiniteElement),
+ coefficients_(coefficients)
{
assert(localFiniteElement_.localBasis().size() == coefficients_.size());
}
diff --git a/dune/gfe/localtangentfefunction.hh b/dune/gfe/localtangentfefunction.hh
index 349a4644..ea8a86d4 100644
--- a/dune/gfe/localtangentfefunction.hh
+++ b/dune/gfe/localtangentfefunction.hh
@@ -38,9 +38,9 @@ namespace Dune {
* \param coefficients Values of the function at the Lagrange points
*/
LocalTangentFEFunction(const LocalFiniteElement& localFiniteElement,
- const std::vector<TargetSpace>& coefficients)
- : localFiniteElement_(localFiniteElement),
- coefficients_(coefficients)
+ const std::vector<TargetSpace>& coefficients)
+ : localFiniteElement_(localFiniteElement),
+ coefficients_(coefficients)
{
assert(localFiniteElement_.localBasis().size() == coefficients_.size());
}
diff --git a/dune/gfe/maxnormtrustregion.hh b/dune/gfe/maxnormtrustregion.hh
index 9bb4a301..50d649da 100644
--- a/dune/gfe/maxnormtrustregion.hh
+++ b/dune/gfe/maxnormtrustregion.hh
@@ -10,89 +10,89 @@ class MaxNormTrustRegion
{
public:
- MaxNormTrustRegion(size_t size, field_type initialRadius)
- : obstacles_(size)
- {
- set(initialRadius);
- }
-
- void set(field_type radius) {
+ MaxNormTrustRegion(size_t size, field_type initialRadius)
+ : obstacles_(size)
+ {
+ set(initialRadius);
+ }
- radius_ = radius;
+ void set(field_type radius) {
- for (size_t i=0; i<obstacles_.size(); i++) {
+ radius_ = radius;
- for (int k=0; k<blocksize; k++) {
+ for (size_t i=0; i<obstacles_.size(); i++) {
- obstacles_[i].lower(k) = -radius;
- obstacles_[i].upper(k) = radius;
+ for (int k=0; k<blocksize; k++) {
- }
+ obstacles_[i].lower(k) = -radius;
+ obstacles_[i].upper(k) = radius;
- }
+ }
}
- /** \brief Set trust region radius with a separate scaling for each vector block component
- */
- void set(field_type radius, const Dune::FieldVector<field_type, blocksize>& scaling) {
+ }
- radius_ = radius;
+ /** \brief Set trust region radius with a separate scaling for each vector block component
+ */
+ void set(field_type radius, const Dune::FieldVector<field_type, blocksize>& scaling) {
- for (size_t i=0; i<obstacles_.size(); i++) {
+ radius_ = radius;
- for (int k=0; k<blocksize; k++) {
+ for (size_t i=0; i<obstacles_.size(); i++) {
- obstacles_[i].lower(k) = -radius*scaling[k];
- obstacles_[i].upper(k) = radius*scaling[k];
+ for (int k=0; k<blocksize; k++) {
- }
- }
+ obstacles_[i].lower(k) = -radius*scaling[k];
+ obstacles_[i].upper(k) = radius*scaling[k];
+ }
}
- /** \brief Return true if the given vector is not contained in the trust region */
- bool violates(const Dune::BlockVector<Dune::FieldVector<double,blocksize> >& v) const
- {
- assert(v.size() == obstacles_.size());
- for (size_t i=0; i<v.size(); i++)
- for (size_t j=0; j<blocksize; j++)
- if (v[i][j] < obstacles_[i].lower(j) or v[i][j] > obstacles_[i].upper(j))
- return true;
+ }
- return false;
- }
+ /** \brief Return true if the given vector is not contained in the trust region */
+ bool violates(const Dune::BlockVector<Dune::FieldVector<double,blocksize> >& v) const
+ {
+ assert(v.size() == obstacles_.size());
+ for (size_t i=0; i<v.size(); i++)
+ for (size_t j=0; j<blocksize; j++)
+ if (v[i][j] < obstacles_[i].lower(j) or v[i][j] > obstacles_[i].upper(j))
+ return true;
- field_type radius() const {
- return radius_;
- }
+ return false;
+ }
- void scale(field_type factor) {
+ field_type radius() const {
+ return radius_;
+ }
- radius_ *= factor;
+ void scale(field_type factor) {
- for (size_t i=0; i<obstacles_.size(); i++) {
+ radius_ *= factor;
- for (int k=0; k<blocksize; k++) {
+ for (size_t i=0; i<obstacles_.size(); i++) {
- obstacles_[i].lower(k) *= factor;
- obstacles_[i].upper(k) *= factor;
+ for (int k=0; k<blocksize; k++) {
- }
+ obstacles_[i].lower(k) *= factor;
+ obstacles_[i].upper(k) *= factor;
- }
+ }
}
- const std::vector<BoxConstraint<field_type,blocksize> >& obstacles() const {
- return obstacles_;
- }
+ }
+
+ const std::vector<BoxConstraint<field_type,blocksize> >& obstacles() const {
+ return obstacles_;
+ }
private:
- std::vector<BoxConstraint<field_type,blocksize> > obstacles_;
+ std::vector<BoxConstraint<field_type,blocksize> > obstacles_;
- field_type radius_;
+ field_type radius_;
};
diff --git a/dune/gfe/mixedriemanniantrsolver.cc b/dune/gfe/mixedriemanniantrsolver.cc
index ea340161..b93229e7 100644
--- a/dune/gfe/mixedriemanniantrsolver.cc
+++ b/dune/gfe/mixedriemanniantrsolver.cc
@@ -24,556 +24,556 @@
#include <dune/gfe/cosseratvtkwriter.hh>
template <class GridType,
- class Basis,
- class Basis0, class TargetSpace0,
- class Basis1, class TargetSpace1>
+ class Basis,
+ class Basis0, class TargetSpace0,
+ class Basis1, class TargetSpace1>
void MixedRiemannianTrustRegionSolver<GridType,Basis,Basis0,TargetSpace0,Basis1,TargetSpace1>::
setup(const GridType& grid,
const MixedGFEAssembler<Basis, TargetSpace0, TargetSpace1>* assembler,
const Basis0& tmpBasis0,
const Basis1& tmpBasis1,
- const SolutionType& x,
- const Dune::BitSetVector<blocksize0>& dirichletNodes0,
- const Dune::BitSetVector<blocksize1>& dirichletNodes1,
- double tolerance,
- int maxTrustRegionSteps,
- double initialTrustRegionRadius,
- int multigridIterations,
- double mgTolerance,
- int mu,
- int nu1,
- int nu2,
- int baseIterations,
- double baseTolerance,
- bool instrumented)
+ const SolutionType& x,
+ const Dune::BitSetVector<blocksize0>& dirichletNodes0,
+ const Dune::BitSetVector<blocksize1>& dirichletNodes1,
+ double tolerance,
+ int maxTrustRegionSteps,
+ double initialTrustRegionRadius,
+ int multigridIterations,
+ double mgTolerance,
+ int mu,
+ int nu1,
+ int nu2,
+ int baseIterations,
+ double baseTolerance,
+ bool instrumented)
{
- int rank = grid.comm().rank();
-
- grid_ = &grid;
- assembler_ = assembler;
- basis0_ = std::unique_ptr<Basis0>(new Basis0(tmpBasis0));
- basis1_ = std::unique_ptr<Basis1>(new Basis1(tmpBasis1));
- x_ = x;
- tolerance_ = tolerance;
- maxTrustRegionSteps_ = maxTrustRegionSteps;
- initialTrustRegionRadius_ = initialTrustRegionRadius;
- innerIterations_ = multigridIterations;
- innerTolerance_ = mgTolerance;
- ignoreNodes0_ = &dirichletNodes0;
- ignoreNodes1_ = &dirichletNodes1;
-
- int numLevels = grid_->maxLevel()+1;
-
- //////////////////////////////////////////////////////////////////
- // Create global numbering for matrix and vector transfer
- //////////////////////////////////////////////////////////////////
+ int rank = grid.comm().rank();
+
+ grid_ = &grid;
+ assembler_ = assembler;
+ basis0_ = std::unique_ptr<Basis0>(new Basis0(tmpBasis0));
+ basis1_ = std::unique_ptr<Basis1>(new Basis1(tmpBasis1));
+ x_ = x;
+ tolerance_ = tolerance;
+ maxTrustRegionSteps_ = maxTrustRegionSteps;
+ initialTrustRegionRadius_ = initialTrustRegionRadius;
+ innerIterations_ = multigridIterations;
+ innerTolerance_ = mgTolerance;
+ ignoreNodes0_ = &dirichletNodes0;
+ ignoreNodes1_ = &dirichletNodes1;
+
+ int numLevels = grid_->maxLevel()+1;
+
+ //////////////////////////////////////////////////////////////////
+ // Create global numbering for matrix and vector transfer
+ //////////////////////////////////////////////////////////////////
#if 0
- guIndex_ = std::unique_ptr<GUIndex>(new GUIndex(grid_->leafGridView()));
+ guIndex_ = std::unique_ptr<GUIndex>(new GUIndex(grid_->leafGridView()));
#endif
- // ////////////////////////////////
- // Create a multigrid solver
- // ////////////////////////////////
+ // ////////////////////////////////
+ // Create a multigrid solver
+ // ////////////////////////////////
#ifdef HAVE_IPOPT
- // First create an IPOpt base solver
- auto baseSolver0 = std::make_shared<QuadraticIPOptSolver<MatrixType00,CorrectionType0>>();
- baseSolver0->setVerbosity(NumProc::QUIET);
- baseSolver0->setTolerance(baseTolerance);
- auto baseSolver1 = std::make_shared<QuadraticIPOptSolver<MatrixType11,CorrectionType1>>();
- baseSolver1->setVerbosity(NumProc::QUIET);
- baseSolver1->setTolerance(baseTolerance);
+ // First create an IPOpt base solver
+ auto baseSolver0 = std::make_shared<QuadraticIPOptSolver<MatrixType00,CorrectionType0> >();
+ baseSolver0->setVerbosity(NumProc::QUIET);
+ baseSolver0->setTolerance(baseTolerance);
+ auto baseSolver1 = std::make_shared<QuadraticIPOptSolver<MatrixType11,CorrectionType1> >();
+ baseSolver1->setVerbosity(NumProc::QUIET);
+ baseSolver1->setTolerance(baseTolerance);
#else
- // First create a Gauss-seidel base solver
- auto baseSolverStep0 = std::make_shared< TrustRegionGSStep<MatrixType00, CorrectionType0> >();
- auto baseSolverStep1 = std::make_shared< TrustRegionGSStep<MatrixType11, CorrectionType1> >();
-
- // Hack: the two-norm may not scale all that well, but it is fast!
- auto baseNorm0 = std::make_shared< TwoNorm<CorrectionType0> >();
- auto baseNorm1 = std::make_shared< TwoNorm<CorrectionType1> >();
-
- auto baseSolver0 = std::make_shared< ::LoopSolver<CorrectionType0> >(baseSolverStep0,
- baseIterations,
- baseTolerance,
- baseNorm0,
- Solver::QUIET);
-
- auto baseSolver1 = std::make_shared< ::LoopSolver<CorrectionType1> >(baseSolverStep1,
- baseIterations,
- baseTolerance,
- baseNorm1,
- Solver::QUIET);
+ // First create a Gauss-seidel base solver
+ auto baseSolverStep0 = std::make_shared< TrustRegionGSStep<MatrixType00, CorrectionType0> >();
+ auto baseSolverStep1 = std::make_shared< TrustRegionGSStep<MatrixType11, CorrectionType1> >();
+
+ // Hack: the two-norm may not scale all that well, but it is fast!
+ auto baseNorm0 = std::make_shared< TwoNorm<CorrectionType0> >();
+ auto baseNorm1 = std::make_shared< TwoNorm<CorrectionType1> >();
+
+ auto baseSolver0 = std::make_shared< ::LoopSolver<CorrectionType0> >(baseSolverStep0,
+ baseIterations,
+ baseTolerance,
+ baseNorm0,
+ Solver::QUIET);
+
+ auto baseSolver1 = std::make_shared< ::LoopSolver<CorrectionType1> >(baseSolverStep1,
+ baseIterations,
+ baseTolerance,
+ baseNorm1,
+ Solver::QUIET);
#endif
- // Transfer all Dirichlet data to the master processor
+ // Transfer all Dirichlet data to the master processor
#if 0
- VectorCommunicator<GUIndex, Dune::BitSetVector<blocksize> > vectorComm(*guIndex_, 0);
- Dune::BitSetVector<blocksize>* globalDirichletNodes = NULL;
- globalDirichletNodes = new Dune::BitSetVector<blocksize>(vectorComm.reduceCopy(dirichletNodes));
+ VectorCommunicator<GUIndex, Dune::BitSetVector<blocksize> > vectorComm(*guIndex_, 0);
+ Dune::BitSetVector<blocksize>* globalDirichletNodes = NULL;
+ globalDirichletNodes = new Dune::BitSetVector<blocksize>(vectorComm.reduceCopy(dirichletNodes));
#endif
- Dune::BitSetVector<blocksize0>* globalDirichletNodes0 = NULL;
- globalDirichletNodes0 = new Dune::BitSetVector<blocksize0>(dirichletNodes0);
- Dune::BitSetVector<blocksize1>* globalDirichletNodes1 = NULL;
- globalDirichletNodes1 = new Dune::BitSetVector<blocksize1>(dirichletNodes1);
+ Dune::BitSetVector<blocksize0>* globalDirichletNodes0 = NULL;
+ globalDirichletNodes0 = new Dune::BitSetVector<blocksize0>(dirichletNodes0);
+ Dune::BitSetVector<blocksize1>* globalDirichletNodes1 = NULL;
+ globalDirichletNodes1 = new Dune::BitSetVector<blocksize1>(dirichletNodes1);
- // Make pre and postsmoothers
- auto presmoother0 = std::make_shared<TrustRegionGSStep<MatrixType00, CorrectionType0> >();
- auto postsmoother0 = std::make_shared<TrustRegionGSStep<MatrixType00, CorrectionType0> >();
+ // Make pre and postsmoothers
+ auto presmoother0 = std::make_shared<TrustRegionGSStep<MatrixType00, CorrectionType0> >();
+ auto postsmoother0 = std::make_shared<TrustRegionGSStep<MatrixType00, CorrectionType0> >();
- mmgStep0 = new MonotoneMGStep<MatrixType00, CorrectionType0>;
+ mmgStep0 = new MonotoneMGStep<MatrixType00, CorrectionType0>;
- mmgStep0->setMGType(mu, nu1, nu2);
- mmgStep0->ignoreNodes_ = globalDirichletNodes0;
- mmgStep0->setBaseSolver(baseSolver0);
- mmgStep0->setSmoother(presmoother0, postsmoother0);
- mmgStep0->setObstacleRestrictor(std::make_shared<MandelObstacleRestrictor<CorrectionType0>>());
- mmgStep0->setVerbosity(Solver::QUIET);
+ mmgStep0->setMGType(mu, nu1, nu2);
+ mmgStep0->ignoreNodes_ = globalDirichletNodes0;
+ mmgStep0->setBaseSolver(baseSolver0);
+ mmgStep0->setSmoother(presmoother0, postsmoother0);
+ mmgStep0->setObstacleRestrictor(std::make_shared<MandelObstacleRestrictor<CorrectionType0> >());
+ mmgStep0->setVerbosity(Solver::QUIET);
- auto presmoother1 = std::make_shared<TrustRegionGSStep<MatrixType11, CorrectionType1> >();
- auto postsmoother1 = std::make_shared<TrustRegionGSStep<MatrixType11, CorrectionType1> >();
+ auto presmoother1 = std::make_shared<TrustRegionGSStep<MatrixType11, CorrectionType1> >();
+ auto postsmoother1 = std::make_shared<TrustRegionGSStep<MatrixType11, CorrectionType1> >();
- mmgStep1 = new MonotoneMGStep<MatrixType11, CorrectionType1>;
+ mmgStep1 = new MonotoneMGStep<MatrixType11, CorrectionType1>;
- mmgStep1->setMGType(mu, nu1, nu2);
- mmgStep1->ignoreNodes_ = globalDirichletNodes1;
- mmgStep1->setBaseSolver(baseSolver1);
- mmgStep1->setSmoother(presmoother1, postsmoother1);
- mmgStep1->setObstacleRestrictor(std::make_shared<MandelObstacleRestrictor<CorrectionType1>>());
- mmgStep1->setVerbosity(Solver::QUIET);
+ mmgStep1->setMGType(mu, nu1, nu2);
+ mmgStep1->ignoreNodes_ = globalDirichletNodes1;
+ mmgStep1->setBaseSolver(baseSolver1);
+ mmgStep1->setSmoother(presmoother1, postsmoother1);
+ mmgStep1->setObstacleRestrictor(std::make_shared<MandelObstacleRestrictor<CorrectionType1> >());
+ mmgStep1->setVerbosity(Solver::QUIET);
- // //////////////////////////////////////////////////////////////////////////////////////
- // Assemble a Laplace matrix to create a norm that's equivalent to the H1-norm
- // //////////////////////////////////////////////////////////////////////////////////////
- Basis0 basis0(grid.leafGridView());
- Basis1 basis1(grid.leafGridView());
+ // //////////////////////////////////////////////////////////////////////////////////////
+ // Assemble a Laplace matrix to create a norm that's equivalent to the H1-norm
+ // //////////////////////////////////////////////////////////////////////////////////////
+ Basis0 basis0(grid.leafGridView());
+ Basis1 basis1(grid.leafGridView());
- // ////////////////////////////////////////////////////////////
- // Create Hessian matrix and its occupation structure
- // ////////////////////////////////////////////////////////////
+ // ////////////////////////////////////////////////////////////
+ // Create Hessian matrix and its occupation structure
+ // ////////////////////////////////////////////////////////////
- // \todo Why are the hessianMatrix objects class members at all, and not local to 'solve'?
+ // \todo Why are the hessianMatrix objects class members at all, and not local to 'solve'?
- hessianMatrix_ = std::make_unique<MatrixType>();
+ hessianMatrix_ = std::make_unique<MatrixType>();
- // ////////////////////////////////////
- // Create the transfer operators
- // ////////////////////////////////////
+ // ////////////////////////////////////
+ // Create the transfer operators
+ // ////////////////////////////////////
- mmgStep0->mgTransfer_.resize(numLevels-1);
- mmgStep1->mgTransfer_.resize(numLevels-1);
+ mmgStep0->mgTransfer_.resize(numLevels-1);
+ mmgStep1->mgTransfer_.resize(numLevels-1);
- // Get bind to some element to be able to query the FE space order
- auto localView0 = basis0.localView();
- localView0.bind(*grid.leafGridView().template begin<0>());
+ // Get bind to some element to be able to query the FE space order
+ auto localView0 = basis0.localView();
+ localView0.bind(*grid.leafGridView().template begin<0>());
- if (localView0.tree().finiteElement().localBasis().order() > 1)
- {
- if (numLevels>1) {
- typedef typename TruncatedCompressedMGTransfer<CorrectionType0>::TransferOperatorType TransferOperatorType;
- Dune::Functions::LagrangeBasis<typename GridType::LeafGridView,1> p1Basis(grid_->leafGridView());
-
- TransferOperatorType pkToP1TransferMatrix;
- assembleGlobalBasisTransferMatrix(pkToP1TransferMatrix,p1Basis,*basis0_);
+ if (localView0.tree().finiteElement().localBasis().order() > 1)
+ {
+ if (numLevels>1) {
+ typedef typename TruncatedCompressedMGTransfer<CorrectionType0>::TransferOperatorType TransferOperatorType;
+ Dune::Functions::LagrangeBasis<typename GridType::LeafGridView,1> p1Basis(grid_->leafGridView());
- mmgStep0->mgTransfer_.back() = std::make_shared<TruncatedCompressedMGTransfer<CorrectionType0>>();
- std::shared_ptr<TransferOperatorType> topTransferOperator = std::make_shared<TransferOperatorType>(pkToP1TransferMatrix);
- std::dynamic_pointer_cast<TruncatedCompressedMGTransfer<CorrectionType0>>(mmgStep0->mgTransfer_.back())->setMatrix(topTransferOperator);
+ TransferOperatorType pkToP1TransferMatrix;
+ assembleGlobalBasisTransferMatrix(pkToP1TransferMatrix,p1Basis,*basis0_);
- for (size_t i=0; i<mmgStep0->mgTransfer_.size()-1; i++){
- // Construct the local multigrid transfer matrix
- auto newTransferOp0 = std::make_shared<TruncatedCompressedMGTransfer<CorrectionType0>>();
- newTransferOp0->setup(*grid_,i+1,i+2);
+ mmgStep0->mgTransfer_.back() = std::make_shared<TruncatedCompressedMGTransfer<CorrectionType0> >();
+ std::shared_ptr<TransferOperatorType> topTransferOperator = std::make_shared<TransferOperatorType>(pkToP1TransferMatrix);
+ std::dynamic_pointer_cast<TruncatedCompressedMGTransfer<CorrectionType0> >(mmgStep0->mgTransfer_.back())->setMatrix(topTransferOperator);
- mmgStep0->mgTransfer_[i] = newTransferOp0;
- }
+ for (size_t i=0; i<mmgStep0->mgTransfer_.size()-1; i++) {
+ // Construct the local multigrid transfer matrix
+ auto newTransferOp0 = std::make_shared<TruncatedCompressedMGTransfer<CorrectionType0> >();
+ newTransferOp0->setup(*grid_,i+1,i+2);
+ mmgStep0->mgTransfer_[i] = newTransferOp0;
}
}
- else // order == 1
- {
- for (size_t i=0; i<mmgStep0->mgTransfer_.size(); i++){
+ }
+ else // order == 1
+ {
- // Construct the local multigrid transfer matrix
- auto newTransferOp0 = std::make_shared<TruncatedCompressedMGTransfer<CorrectionType0>>();
- newTransferOp0->setup(*grid_,i,i+1);
+ for (size_t i=0; i<mmgStep0->mgTransfer_.size(); i++) {
- mmgStep0->mgTransfer_[i] = newTransferOp0;
- }
+ // Construct the local multigrid transfer matrix
+ auto newTransferOp0 = std::make_shared<TruncatedCompressedMGTransfer<CorrectionType0> >();
+ newTransferOp0->setup(*grid_,i,i+1);
+ mmgStep0->mgTransfer_[i] = newTransferOp0;
}
- auto localView1 = basis1.localView();
- localView1.bind(*grid.leafGridView().template begin<0>());
+ }
- if (localView1.tree().finiteElement().localBasis().order() > 1)
- {
- if (numLevels>1) {
- typedef typename TruncatedCompressedMGTransfer<CorrectionType1>::TransferOperatorType TransferOperatorType;
- Dune::Functions::LagrangeBasis<typename GridType::LeafGridView,1> p1Basis(grid_->leafGridView());
-
- TransferOperatorType pkToP1TransferMatrix;
- assembleGlobalBasisTransferMatrix(pkToP1TransferMatrix,p1Basis,*basis1_);
-
- mmgStep1->mgTransfer_.back() = std::make_shared<TruncatedCompressedMGTransfer<CorrectionType1>>();
- std::shared_ptr<TransferOperatorType> topTransferOperator = std::make_shared<TransferOperatorType>(pkToP1TransferMatrix);
- std::dynamic_pointer_cast<TruncatedCompressedMGTransfer<CorrectionType1>>(mmgStep1->mgTransfer_.back())->setMatrix(topTransferOperator);
-
- for (size_t i=0; i<mmgStep1->mgTransfer_.size()-1; i++){
- // Construct the local multigrid transfer matrix
- auto newTransferOp1 = std::make_shared<TruncatedCompressedMGTransfer<CorrectionType1>>();
- newTransferOp1->setup(*grid_,i+1,i+2);
- mmgStep1->mgTransfer_[i] = newTransferOp1;
- }
+ auto localView1 = basis1.localView();
+ localView1.bind(*grid.leafGridView().template begin<0>());
- }
+ if (localView1.tree().finiteElement().localBasis().order() > 1)
+ {
+ if (numLevels>1) {
+ typedef typename TruncatedCompressedMGTransfer<CorrectionType1>::TransferOperatorType TransferOperatorType;
+ Dune::Functions::LagrangeBasis<typename GridType::LeafGridView,1> p1Basis(grid_->leafGridView());
- }
- else // order == 1
- {
+ TransferOperatorType pkToP1TransferMatrix;
+ assembleGlobalBasisTransferMatrix(pkToP1TransferMatrix,p1Basis,*basis1_);
- for (size_t i=0; i<mmgStep1->mgTransfer_.size(); i++){
+ mmgStep1->mgTransfer_.back() = std::make_shared<TruncatedCompressedMGTransfer<CorrectionType1> >();
+ std::shared_ptr<TransferOperatorType> topTransferOperator = std::make_shared<TransferOperatorType>(pkToP1TransferMatrix);
+ std::dynamic_pointer_cast<TruncatedCompressedMGTransfer<CorrectionType1> >(mmgStep1->mgTransfer_.back())->setMatrix(topTransferOperator);
+ for (size_t i=0; i<mmgStep1->mgTransfer_.size()-1; i++) {
// Construct the local multigrid transfer matrix
- auto newTransferOp = std::make_shared<TruncatedCompressedMGTransfer<CorrectionType1>>();
- newTransferOp->setup(*grid_,i,i+1);
- mmgStep1->mgTransfer_[i] = newTransferOp;
+ auto newTransferOp1 = std::make_shared<TruncatedCompressedMGTransfer<CorrectionType1> >();
+ newTransferOp1->setup(*grid_,i+1,i+2);
+ mmgStep1->mgTransfer_[i] = newTransferOp1;
}
+
}
- // //////////////////////////////////////////////////////////
- // Create obstacles
- // //////////////////////////////////////////////////////////
+ }
+ else // order == 1
+ {
- if (rank==0)
- {
+ for (size_t i=0; i<mmgStep1->mgTransfer_.size(); i++) {
+
+ // Construct the local multigrid transfer matrix
+ auto newTransferOp = std::make_shared<TruncatedCompressedMGTransfer<CorrectionType1> >();
+ newTransferOp->setup(*grid_,i,i+1);
+ mmgStep1->mgTransfer_[i] = newTransferOp;
+ }
+ }
+
+ // //////////////////////////////////////////////////////////
+ // Create obstacles
+ // //////////////////////////////////////////////////////////
+
+ if (rank==0)
+ {
#if 0
- hasObstacle0_.resize(guIndex_->nGlobalEntity(), true);
+ hasObstacle0_.resize(guIndex_->nGlobalEntity(), true);
#else
- hasObstacle0_.resize(assembler->basis_.size({0}), true);
- hasObstacle1_.resize(assembler->basis_.size({1}), true);
+ hasObstacle0_.resize(assembler->basis_.size({0}), true);
+ hasObstacle1_.resize(assembler->basis_.size({1}), true);
#endif
- mmgStep0->setHasObstacles(hasObstacle0_);
- mmgStep1->setHasObstacles(hasObstacle1_);
- }
-
+ mmgStep0->setHasObstacles(hasObstacle0_);
+ mmgStep1->setHasObstacles(hasObstacle1_);
}
+}
+
template <class GridType,
- class Basis,
- class Basis0, class TargetSpace0,
- class Basis1, class TargetSpace1>
+ class Basis,
+ class Basis0, class TargetSpace0,
+ class Basis1, class TargetSpace1>
void MixedRiemannianTrustRegionSolver<GridType,Basis,Basis0,TargetSpace0,Basis1,TargetSpace1>::solve()
{
- int argc = 0;
- char** argv;
- Dune::MPIHelper& mpiHelper = Dune::MPIHelper::instance(argc,argv);
- int rank = grid_->comm().rank();
-
- // \todo Use global index set instead of basis for parallel computations
- MaxNormTrustRegion<blocksize0> trustRegion0(assembler_->basis_.size({0}), initialTrustRegionRadius_);
- MaxNormTrustRegion<blocksize1> trustRegion1(assembler_->basis_.size({1}), initialTrustRegionRadius_);
- trustRegion0.set(initialTrustRegionRadius_, std::get<0>(scaling_));
- trustRegion1.set(initialTrustRegionRadius_, std::get<1>(scaling_));
- auto smallestScalingParameter0 = *std::min_element(std::begin(std::get<0>(scaling_)), std::end(std::get<0>(scaling_)));
- auto smallestScalingParameter1 = *std::min_element(std::begin(std::get<1>(scaling_)), std::end(std::get<1>(scaling_)));
- auto smallestScalingParameter = std::min(smallestScalingParameter0,smallestScalingParameter1);
-
- std::vector<BoxConstraint<field_type,blocksize0> > trustRegionObstacles0;
- std::vector<BoxConstraint<field_type,blocksize1> > trustRegionObstacles1;
-
- // /////////////////////////////////////////////////////
- // Trust-Region Solver
- // /////////////////////////////////////////////////////
-
- using namespace Dune::TypeTree::Indices;
-
- double oldEnergy = assembler_->computeEnergy(x_[_0], x_[_1]);
- oldEnergy = mpiHelper.getCommunication().sum(oldEnergy);
-
- bool recomputeGradientHessian = true;
- CorrectionType rhs;
- MatrixType stiffnessMatrix;
- CorrectionType rhs_global;
- double totalAssemblyTime = 0.0;
- double totalSolverTime = 0.0;
+ int argc = 0;
+ char** argv;
+ Dune::MPIHelper& mpiHelper = Dune::MPIHelper::instance(argc,argv);
+ int rank = grid_->comm().rank();
+
+ // \todo Use global index set instead of basis for parallel computations
+ MaxNormTrustRegion<blocksize0> trustRegion0(assembler_->basis_.size({0}), initialTrustRegionRadius_);
+ MaxNormTrustRegion<blocksize1> trustRegion1(assembler_->basis_.size({1}), initialTrustRegionRadius_);
+ trustRegion0.set(initialTrustRegionRadius_, std::get<0>(scaling_));
+ trustRegion1.set(initialTrustRegionRadius_, std::get<1>(scaling_));
+ auto smallestScalingParameter0 = *std::min_element(std::begin(std::get<0>(scaling_)), std::end(std::get<0>(scaling_)));
+ auto smallestScalingParameter1 = *std::min_element(std::begin(std::get<1>(scaling_)), std::end(std::get<1>(scaling_)));
+ auto smallestScalingParameter = std::min(smallestScalingParameter0,smallestScalingParameter1);
+
+ std::vector<BoxConstraint<field_type,blocksize0> > trustRegionObstacles0;
+ std::vector<BoxConstraint<field_type,blocksize1> > trustRegionObstacles1;
+
+ // /////////////////////////////////////////////////////
+ // Trust-Region Solver
+ // /////////////////////////////////////////////////////
+
+ using namespace Dune::TypeTree::Indices;
+
+ double oldEnergy = assembler_->computeEnergy(x_[_0], x_[_1]);
+ oldEnergy = mpiHelper.getCommunication().sum(oldEnergy);
+
+ bool recomputeGradientHessian = true;
+ CorrectionType rhs;
+ MatrixType stiffnessMatrix;
+ CorrectionType rhs_global;
+ double totalAssemblyTime = 0.0;
+ double totalSolverTime = 0.0;
#if 0
- VectorCommunicator<GUIndex, CorrectionType> vectorComm(*guIndex_, 0);
- MatrixCommunicator<GUIndex, MatrixType> matrixComm(*guIndex_, 0);
+ VectorCommunicator<GUIndex, CorrectionType> vectorComm(*guIndex_, 0);
+ MatrixCommunicator<GUIndex, MatrixType> matrixComm(*guIndex_, 0);
#endif
- for (int i=0; i<maxTrustRegionSteps_; i++) {
+ for (int i=0; i<maxTrustRegionSteps_; i++) {
- statistics_.finalIteration = i;
- Dune::Timer totalTimer;
- if (this->verbosity_ == Solver::FULL and rank==0) {
- std::cout << "----------------------------------------------------" << std::endl;
- std::cout << " Trust-Region Step Number: " << i
- << ", radius: " << trustRegion0.radius()
- << ", energy: " << oldEnergy << std::endl;
- std::cout << "----------------------------------------------------" << std::endl;
- }
+ statistics_.finalIteration = i;
+ Dune::Timer totalTimer;
+ if (this->verbosity_ == Solver::FULL and rank==0) {
+ std::cout << "----------------------------------------------------" << std::endl;
+ std::cout << " Trust-Region Step Number: " << i
+ << ", radius: " << trustRegion0.radius()
+ << ", energy: " << oldEnergy << std::endl;
+ std::cout << "----------------------------------------------------" << std::endl;
+ }
- CorrectionType corr;
- corr[_0].resize(x_[_0].size());
- corr[_1].resize(x_[_1].size());
- corr = 0;
+ CorrectionType corr;
+ corr[_0].resize(x_[_0].size());
+ corr[_1].resize(x_[_1].size());
+ corr = 0;
- Dune::Timer assemblyTimer;
+ Dune::Timer assemblyTimer;
- if (recomputeGradientHessian) {
+ if (recomputeGradientHessian) {
- assembler_->assembleGradientAndHessian(x_[_0],
- x_[_1],
- rhs[_0],
- rhs[_1],
- *hessianMatrix_,
- i==0 // assemble occupation pattern only for the first call
- );
+ assembler_->assembleGradientAndHessian(x_[_0],
+ x_[_1],
+ rhs[_0],
+ rhs[_1],
+ *hessianMatrix_,
+ i==0 // assemble occupation pattern only for the first call
+ );
- rhs *= -1; // The right hand side is the _negative_ gradient
+ rhs *= -1; // The right hand side is the _negative_ gradient
- if (this->verbosity_ == Solver::FULL)
- std::cout << "Assembly took " << assemblyTimer.elapsed() << " sec." << std::endl;
- totalAssemblyTime += assemblyTimer.elapsed();
+ if (this->verbosity_ == Solver::FULL)
+ std::cout << "Assembly took " << assemblyTimer.elapsed() << " sec." << std::endl;
+ totalAssemblyTime += assemblyTimer.elapsed();
- // Transfer matrix data
+ // Transfer matrix data
#if 0
- stiffnessMatrix00 = matrixComm.reduceAdd(*hessianMatrix00_);
- stiffnessMatrix01 = matrixComm.reduceAdd(*hessianMatrix01_);
- stiffnessMatrix10 = matrixComm.reduceAdd(*hessianMatrix10_);
- stiffnessMatrix11 = matrixComm.reduceAdd(*hessianMatrix11_);
+ stiffnessMatrix00 = matrixComm.reduceAdd(*hessianMatrix00_);
+ stiffnessMatrix01 = matrixComm.reduceAdd(*hessianMatrix01_);
+ stiffnessMatrix10 = matrixComm.reduceAdd(*hessianMatrix10_);
+ stiffnessMatrix11 = matrixComm.reduceAdd(*hessianMatrix11_);
#endif
- stiffnessMatrix = *hessianMatrix_;
+ stiffnessMatrix = *hessianMatrix_;
- // Transfer vector data
+ // Transfer vector data
#if 0
- rhs_global0 = vectorComm.reduceAdd(rhs0);
- rhs_global1 = vectorComm.reduceAdd(rhs1);
+ rhs_global0 = vectorComm.reduceAdd(rhs0);
+ rhs_global1 = vectorComm.reduceAdd(rhs1);
#endif
- rhs_global = rhs;
+ rhs_global = rhs;
- recomputeGradientHessian = false;
+ recomputeGradientHessian = false;
- }
+ }
- CorrectionType corr_global;
- corr_global[_0].resize(rhs_global[_0].size());
- corr_global[_1].resize(rhs_global[_1].size());
- corr_global = 0;
- bool solvedByInnerSolver = true;
-
- if (rank==0)
- {
- ///////////////////////////////
- // Solve !
- ///////////////////////////////
- CorrectionType residual = rhs_global;
-
- mmgStep0->setProblem(stiffnessMatrix[_0][_0], corr_global[_0], residual[_0]);
- trustRegionObstacles0 = trustRegion0.obstacles();
- mmgStep0->setObstacles(trustRegionObstacles0);
-
- mmgStep0->preprocess();
-
- mmgStep1->setProblem(stiffnessMatrix[_1][_1], corr_global[_1], residual[_1]);
- trustRegionObstacles1 = trustRegion1.obstacles();
- mmgStep1->setObstacles(trustRegionObstacles1);
-
- mmgStep1->preprocess();
-
- ///////////////////////////////
- // Solve !
- ///////////////////////////////
-
- std::cout << "Solve quadratic problem..." << std::endl;
- double oldEnergy = 0;
- Dune::Timer solutionTimer;
- int ii = 0;
- CorrectionType diff{corr_global};
- try {
- for (; ii<innerIterations_; ii++) {
- diff=corr_global;
- residual[_0] = rhs_global[_0];
- stiffnessMatrix[_0][_1].mmv(corr_global[_1], residual[_0]);
- mmgStep0->setRhs(residual[_0]);
- mmgStep0->iterate();
-
- residual[_1] = rhs_global[_1];
- stiffnessMatrix[_1][_0].mmv(corr_global[_0], residual[_1]);
- mmgStep1->setRhs(residual[_1]);
- mmgStep1->iterate();
-
- // Compute energy
- CorrectionType tmp(corr_global);
- stiffnessMatrix.mv(corr_global,tmp);
- double energy = 0.5 * (tmp*corr_global) - (rhs_global*corr_global);
-
- if (energy > oldEnergy)
- //DUNE_THROW(Dune::Exception, "energy increase!");
- std::cout << "Warning: energy increase!" << std::endl;
-
- oldEnergy = energy;
- diff -= corr_global;
- if (diff.infinity_norm() < innerTolerance_)
- break;
- }
- } catch (Dune::Exception &e) {
- std::cerr << "Error while solving: " << e << std::endl;
- solvedByInnerSolver = false;
- corr_global = 0;
- }
-
- std::cout << "Solving the quadratic problem took " << solutionTimer.elapsed() << " seconds and " << ii << " steps." << std::endl;
- totalSolverTime += solutionTimer.elapsed();
- //std::cout << "Correction: " << std::endl << corr_global << std::endl;
+ CorrectionType corr_global;
+ corr_global[_0].resize(rhs_global[_0].size());
+ corr_global[_1].resize(rhs_global[_1].size());
+ corr_global = 0;
+ bool solvedByInnerSolver = true;
+ if (rank==0)
+ {
+ ///////////////////////////////
+ // Solve !
+ ///////////////////////////////
+ CorrectionType residual = rhs_global;
+
+ mmgStep0->setProblem(stiffnessMatrix[_0][_0], corr_global[_0], residual[_0]);
+ trustRegionObstacles0 = trustRegion0.obstacles();
+ mmgStep0->setObstacles(trustRegionObstacles0);
+
+ mmgStep0->preprocess();
+
+ mmgStep1->setProblem(stiffnessMatrix[_1][_1], corr_global[_1], residual[_1]);
+ trustRegionObstacles1 = trustRegion1.obstacles();
+ mmgStep1->setObstacles(trustRegionObstacles1);
+
+ mmgStep1->preprocess();
+
+ ///////////////////////////////
+ // Solve !
+ ///////////////////////////////
+
+ std::cout << "Solve quadratic problem..." << std::endl;
+ double oldEnergy = 0;
+ Dune::Timer solutionTimer;
+ int ii = 0;
+ CorrectionType diff{corr_global};
+ try {
+ for (; ii<innerIterations_; ii++) {
+ diff=corr_global;
+ residual[_0] = rhs_global[_0];
+ stiffnessMatrix[_0][_1].mmv(corr_global[_1], residual[_0]);
+ mmgStep0->setRhs(residual[_0]);
+ mmgStep0->iterate();
+
+ residual[_1] = rhs_global[_1];
+ stiffnessMatrix[_1][_0].mmv(corr_global[_0], residual[_1]);
+ mmgStep1->setRhs(residual[_1]);
+ mmgStep1->iterate();
+
+ // Compute energy
+ CorrectionType tmp(corr_global);
+ stiffnessMatrix.mv(corr_global,tmp);
+ double energy = 0.5 * (tmp*corr_global) - (rhs_global*corr_global);
+
+ if (energy > oldEnergy)
+ //DUNE_THROW(Dune::Exception, "energy increase!");
+ std::cout << "Warning: energy increase!" << std::endl;
+
+ oldEnergy = energy;
+ diff -= corr_global;
+ if (diff.infinity_norm() < innerTolerance_)
+ break;
}
+ } catch (Dune::Exception &e) {
+ std::cerr << "Error while solving: " << e << std::endl;
+ solvedByInnerSolver = false;
+ corr_global = 0;
+ }
+
+ std::cout << "Solving the quadratic problem took " << solutionTimer.elapsed() << " seconds and " << ii << " steps." << std::endl;
+ totalSolverTime += solutionTimer.elapsed();
+ //std::cout << "Correction: " << std::endl << corr_global << std::endl;
+
+ }
+
+ // Distribute solution
+ if (mpiHelper.size()>1 and rank==0)
+ std::cout << "Transfer solution back to root process ..." << std::endl;
+
+ //corr = vectorComm.scatter(corr_global);
+ corr = corr_global;
+ double energy = 0;
+ double modelDecrease = 0;
+ SolutionType newIterate = x_;
+ if (solvedByInnerSolver) {
+
+ if (this->verbosity_ == NumProc::FULL)
+ std::cout << "Infinity norm of the correction: " << corr.infinity_norm() << std::endl;
+
+ if (corr_global.infinity_norm() < tolerance_ && corr_global.infinity_norm() < trustRegion0.radius()*smallestScalingParameter) {
+ if (verbosity_ == NumProc::FULL and rank==0)
+ std::cout << "CORRECTION IS SMALL ENOUGH" << std::endl;
+
+ if (verbosity_ != NumProc::QUIET and rank==0)
+ std::cout << i+1 << " trust-region steps were taken" << std::endl << "Total solver time: " << totalSolverTime << " sec., total assembly time: " << totalAssemblyTime << " sec." << std::endl;
+ break;
+ }
+
+ // ////////////////////////////////////////////////////
+ // Check whether trust-region step can be accepted
+ // ////////////////////////////////////////////////////
+
+ for (size_t j=0; j<newIterate[_0].size(); j++)
+ newIterate[_0][j] = TargetSpace0::exp(newIterate[_0][j], corr[_0][j]);
+
+ for (size_t j=0; j<newIterate[_1].size(); j++)
+ newIterate[_1][j] = TargetSpace1::exp(newIterate[_1][j], corr[_1][j]);
+
+ try {
+ energy = assembler_->computeEnergy(newIterate[_0],newIterate[_1]);
+ } catch (Dune::Exception &e) {
+ std::cerr << "Error while computing the energy of the new iterate: " << e << std::endl;
+ std::cerr << "Redoing trust region step with smaller radius..." << std::endl;
+ newIterate = x_;
+ solvedByInnerSolver = false;
+ energy = oldEnergy;
+ }
- // Distribute solution
- if (mpiHelper.size()>1 and rank==0)
- std::cout << "Transfer solution back to root process ..." << std::endl;
+ if (solvedByInnerSolver) {
+ energy = mpiHelper.getCommunication().sum(energy);
- //corr = vectorComm.scatter(corr_global);
- corr = corr_global;
- double energy = 0;
- double modelDecrease = 0;
- SolutionType newIterate = x_;
- if (solvedByInnerSolver) {
+ // compute the model decrease
+ // It is $ m(x) - m(x+s) = -<g,s> - 0.5 <s, Hs>
+ // Note that rhs = -g
+ CorrectionType tmp(corr);
+ hessianMatrix_->mv(corr,tmp);
+ modelDecrease = rhs*corr - 0.5 * (corr*tmp);
+ modelDecrease = mpiHelper.getCommunication().sum(modelDecrease);
+ double relativeModelDecrease = modelDecrease / std::fabs(energy);
+
+ if (verbosity_ == NumProc::FULL and rank==0) {
+ std::cout << "Absolute model decrease: " << modelDecrease
+ << ", functional decrease: " << oldEnergy - energy << std::endl;
+ std::cout << "Relative model decrease: " << relativeModelDecrease
+ << ", functional decrease: " << (oldEnergy - energy)/energy << std::endl;
+ }
+
+ assert(modelDecrease >= 0);
+
+ if (energy >= oldEnergy and rank==0) {
if (this->verbosity_ == NumProc::FULL)
- std::cout << "Infinity norm of the correction: " << corr.infinity_norm() << std::endl;
-
- if (corr_global.infinity_norm() < tolerance_ && corr_global.infinity_norm() < trustRegion0.radius()*smallestScalingParameter) {
- if (verbosity_ == NumProc::FULL and rank==0)
- std::cout << "CORRECTION IS SMALL ENOUGH" << std::endl;
-
- if (verbosity_ != NumProc::QUIET and rank==0)
- std::cout << i+1 << " trust-region steps were taken" << std::endl << "Total solver time: " << totalSolverTime << " sec., total assembly time: " << totalAssemblyTime << " sec." << std::endl;
- break;
- }
-
- // ////////////////////////////////////////////////////
- // Check whether trust-region step can be accepted
- // ////////////////////////////////////////////////////
-
- for (size_t j=0; j<newIterate[_0].size(); j++)
- newIterate[_0][j] = TargetSpace0::exp(newIterate[_0][j], corr[_0][j]);
-
- for (size_t j=0; j<newIterate[_1].size(); j++)
- newIterate[_1][j] = TargetSpace1::exp(newIterate[_1][j], corr[_1][j]);
-
- try {
- energy = assembler_->computeEnergy(newIterate[_0],newIterate[_1]);
- } catch (Dune::Exception &e) {
- std::cerr << "Error while computing the energy of the new iterate: " << e << std::endl;
- std::cerr << "Redoing trust region step with smaller radius..." << std::endl;
- newIterate = x_;
- solvedByInnerSolver = false;
- energy = oldEnergy;
- }
-
- if (solvedByInnerSolver) {
- energy = mpiHelper.getCommunication().sum(energy);
-
- // compute the model decrease
- // It is $ m(x) - m(x+s) = -<g,s> - 0.5 <s, Hs>
- // Note that rhs = -g
- CorrectionType tmp(corr);
- hessianMatrix_->mv(corr,tmp);
- modelDecrease = rhs*corr - 0.5 * (corr*tmp);
- modelDecrease = mpiHelper.getCommunication().sum(modelDecrease);
-
- double relativeModelDecrease = modelDecrease / std::fabs(energy);
-
- if (verbosity_ == NumProc::FULL and rank==0) {
- std::cout << "Absolute model decrease: " << modelDecrease
- << ", functional decrease: " << oldEnergy - energy << std::endl;
- std::cout << "Relative model decrease: " << relativeModelDecrease
- << ", functional decrease: " << (oldEnergy - energy)/energy << std::endl;
- }
-
- assert(modelDecrease >= 0);
-
- if (energy >= oldEnergy and rank==0) {
- if (this->verbosity_ == NumProc::FULL)
- std::cout << "Direction is not a descent direction!" << std::endl;
- }
-
- if (energy >= oldEnergy &&
- (std::abs((oldEnergy-energy)/energy) < 1e-9 || relativeModelDecrease < 1e-9)) {
- if (this->verbosity_ == NumProc::FULL and rank==0)
- std::cout << "Suspecting rounding problems" << std::endl;
-
- if (this->verbosity_ != NumProc::QUIET and rank==0)
- std::cout << i+1 << " trust-region steps were taken." << std::endl;
-
- x_ = newIterate;
- break;
- }
-
- }
+ std::cout << "Direction is not a descent direction!" << std::endl;
}
- // //////////////////////////////////////////////
- // Check for acceptance of the step
- // //////////////////////////////////////////////
- if ( solvedByInnerSolver && (oldEnergy-energy) / modelDecrease > 0.9) {
- // very successful iteration
- x_ = newIterate;
- trustRegion0.scale(2);
- trustRegion1.scale(2);
+ if (energy >= oldEnergy &&
+ (std::abs((oldEnergy-energy)/energy) < 1e-9 || relativeModelDecrease < 1e-9)) {
+ if (this->verbosity_ == NumProc::FULL and rank==0)
+ std::cout << "Suspecting rounding problems" << std::endl;
- // current energy becomes 'oldEnergy' for the next iteration
- oldEnergy = energy;
+ if (this->verbosity_ != NumProc::QUIET and rank==0)
+ std::cout << i+1 << " trust-region steps were taken." << std::endl;
- recomputeGradientHessian = true;
+ x_ = newIterate;
+ break;
+ }
- } else if (solvedByInnerSolver && (oldEnergy-energy) / modelDecrease > 0.01
- || std::abs(oldEnergy-energy) < 1e-12) {
- // successful iteration
- x_ = newIterate;
+ }
+ }
+ // //////////////////////////////////////////////
+ // Check for acceptance of the step
+ // //////////////////////////////////////////////
+ if ( solvedByInnerSolver && (oldEnergy-energy) / modelDecrease > 0.9) {
+ // very successful iteration
- // current energy becomes 'oldEnergy' for the next iteration
- oldEnergy = energy;
+ x_ = newIterate;
+ trustRegion0.scale(2);
+ trustRegion1.scale(2);
- recomputeGradientHessian = true;
+ // current energy becomes 'oldEnergy' for the next iteration
+ oldEnergy = energy;
- } else {
+ recomputeGradientHessian = true;
- // unsuccessful iteration
+ } else if (solvedByInnerSolver && (oldEnergy-energy) / modelDecrease > 0.01
+ || std::abs(oldEnergy-energy) < 1e-12) {
+ // successful iteration
+ x_ = newIterate;
- // Decrease the trust-region radius
- trustRegion0.scale(0.5);
- trustRegion1.scale(0.5);
+ // current energy becomes 'oldEnergy' for the next iteration
+ oldEnergy = energy;
- if (this->verbosity_ == NumProc::FULL and rank==0)
- std::cout << "Unsuccessful iteration!" << std::endl;
+ recomputeGradientHessian = true;
- if (trustRegion0.radius() < 1e-9) {
- if (this->verbosity_ == NumProc::FULL and rank==0)
- std::cout << "The radius is too small to continue with a meaningful calculation!" << std::endl;
+ } else {
- if (this->verbosity_ != NumProc::QUIET and rank==0)
- std::cout << i+1 << " trust-region steps were taken" << std::endl << "Total solver time: " << totalSolverTime << " sec., total assembly time: " << totalAssemblyTime << " sec." << std::endl;
- break;
- }
- }
+ // unsuccessful iteration
+
+ // Decrease the trust-region radius
+ trustRegion0.scale(0.5);
+ trustRegion1.scale(0.5);
+
+ if (this->verbosity_ == NumProc::FULL and rank==0)
+ std::cout << "Unsuccessful iteration!" << std::endl;
+
+ if (trustRegion0.radius() < 1e-9) {
+ if (this->verbosity_ == NumProc::FULL and rank==0)
+ std::cout << "The radius is too small to continue with a meaningful calculation!" << std::endl;
+
+ if (this->verbosity_ != NumProc::QUIET and rank==0)
+ std::cout << i+1 << " trust-region steps were taken" << std::endl << "Total solver time: " << totalSolverTime << " sec., total assembly time: " << totalAssemblyTime << " sec." << std::endl;
+ break;
+ }
+ }
#if 0
- // Output each iterate, to better understand what the algorithm does
- DuneFunctionsBasis<Basis0> fufemBasis0(assembler_->basis0_);
- DuneFunctionsBasis<Basis1> fufemBasis1(assembler_->basis1_);
- std::stringstream iAsAscii;
- iAsAscii << i+1;
- CosseratVTKWriter<GridType>::template writeMixed<DuneFunctionsBasis<Basis0>, DuneFunctionsBasis<Basis1> >(fufemBasis0,x_[_0],
- fufemBasis1,x_[_1],
- "mixed-cosserat_iterate_" + iAsAscii.str());
+ // Output each iterate, to better understand what the algorithm does
+ DuneFunctionsBasis<Basis0> fufemBasis0(assembler_->basis0_);
+ DuneFunctionsBasis<Basis1> fufemBasis1(assembler_->basis1_);
+ std::stringstream iAsAscii;
+ iAsAscii << i+1;
+ CosseratVTKWriter<GridType>::template writeMixed<DuneFunctionsBasis<Basis0>, DuneFunctionsBasis<Basis1> >(fufemBasis0,x_[_0],
+ fufemBasis1,x_[_1],
+ "mixed-cosserat_iterate_" + iAsAscii.str());
#endif
- if (rank==0)
- std::cout << "iteration took " << totalTimer.elapsed() << " sec." << std::endl;
+ if (rank==0)
+ std::cout << "iteration took " << totalTimer.elapsed() << " sec." << std::endl;
- }
+ }
- statistics_.finalEnergy = oldEnergy;
+ statistics_.finalEnergy = oldEnergy;
}
diff --git a/dune/gfe/mixedriemanniantrsolver.hh b/dune/gfe/mixedriemanniantrsolver.hh
index 202bf4c2..9740d09a 100644
--- a/dune/gfe/mixedriemanniantrsolver.hh
+++ b/dune/gfe/mixedriemanniantrsolver.hh
@@ -23,163 +23,163 @@
/** \brief Riemannian trust-region solver for geodesic finite-element problems */
template <class GridType,
- class Basis,
- class Basis0, class TargetSpace0,
- class Basis1, class TargetSpace1>
+ class Basis,
+ class Basis0, class TargetSpace0,
+ class Basis1, class TargetSpace1>
class MixedRiemannianTrustRegionSolver
- : public NumProc
+ : public NumProc
{
- const static int blocksize0 = TargetSpace0::TangentVector::dimension;
- const static int blocksize1 = TargetSpace1::TangentVector::dimension;
-
- const static int gridDim = GridType::dimension;
-
- // Centralize the field type here
- typedef double field_type;
-
- // Some types that I need
- typedef Dune::BCRSMatrix<Dune::FieldMatrix<field_type, blocksize0, blocksize0> > MatrixType00;
- typedef Dune::BCRSMatrix<Dune::FieldMatrix<field_type, blocksize0, blocksize1> > MatrixType01;
- typedef Dune::BCRSMatrix<Dune::FieldMatrix<field_type, blocksize1, blocksize0> > MatrixType10;
- typedef Dune::BCRSMatrix<Dune::FieldMatrix<field_type, blocksize1, blocksize1> > MatrixType11;
- typedef Dune::MultiTypeBlockMatrix<Dune::MultiTypeBlockVector<MatrixType00,MatrixType01>,
- Dune::MultiTypeBlockVector<MatrixType10,MatrixType11> > MatrixType;
- typedef Dune::BlockVector<Dune::FieldVector<field_type, blocksize0> > CorrectionType0;
- typedef Dune::BlockVector<Dune::FieldVector<field_type, blocksize1> > CorrectionType1;
- typedef Dune::MultiTypeBlockVector<CorrectionType0, CorrectionType1> CorrectionType;
- typedef Dune::TupleVector<std::vector<TargetSpace0>, std::vector<TargetSpace1> > SolutionType;
-
- /** \brief Records information about the last run of the RiemannianTrustRegionSolver
- *
- * This is used primarily for unit testing.
- */
- struct Statistics
- {
- std::size_t finalIteration;
-
- field_type finalEnergy;
- };
+ const static int blocksize0 = TargetSpace0::TangentVector::dimension;
+ const static int blocksize1 = TargetSpace1::TangentVector::dimension;
+
+ const static int gridDim = GridType::dimension;
+
+ // Centralize the field type here
+ typedef double field_type;
+
+ // Some types that I need
+ typedef Dune::BCRSMatrix<Dune::FieldMatrix<field_type, blocksize0, blocksize0> > MatrixType00;
+ typedef Dune::BCRSMatrix<Dune::FieldMatrix<field_type, blocksize0, blocksize1> > MatrixType01;
+ typedef Dune::BCRSMatrix<Dune::FieldMatrix<field_type, blocksize1, blocksize0> > MatrixType10;
+ typedef Dune::BCRSMatrix<Dune::FieldMatrix<field_type, blocksize1, blocksize1> > MatrixType11;
+ typedef Dune::MultiTypeBlockMatrix<Dune::MultiTypeBlockVector<MatrixType00,MatrixType01>,
+ Dune::MultiTypeBlockVector<MatrixType10,MatrixType11> > MatrixType;
+ typedef Dune::BlockVector<Dune::FieldVector<field_type, blocksize0> > CorrectionType0;
+ typedef Dune::BlockVector<Dune::FieldVector<field_type, blocksize1> > CorrectionType1;
+ typedef Dune::MultiTypeBlockVector<CorrectionType0, CorrectionType1> CorrectionType;
+ typedef Dune::TupleVector<std::vector<TargetSpace0>, std::vector<TargetSpace1> > SolutionType;
+
+ /** \brief Records information about the last run of the RiemannianTrustRegionSolver
+ *
+ * This is used primarily for unit testing.
+ */
+ struct Statistics
+ {
+ std::size_t finalIteration;
+
+ field_type finalEnergy;
+ };
public:
- MixedRiemannianTrustRegionSolver()
- : NumProc(NumProc::FULL),
-
- h1SemiNorm0_(nullptr), h1SemiNorm1_(nullptr)
- {
- std::fill(std::get<0>(scaling_).begin(), std::get<0>(scaling_).end(), 1.0);
- std::fill(std::get<1>(scaling_).begin(), std::get<1>(scaling_).end(), 1.0);
- }
-
- /** \brief Set up the solver using a monotone multigrid method as the inner solver */
- void setup(const GridType& grid,
- const MixedGFEAssembler<Basis, TargetSpace0, TargetSpace1>* assembler,
- const Basis0& basis0,
- const Basis1& basis1,
- const SolutionType& x,
- const Dune::BitSetVector<blocksize0>& dirichletNodes0,
- const Dune::BitSetVector<blocksize1>& dirichletNodes1,
- double tolerance,
- int maxTrustRegionSteps,
- double initialTrustRegionRadius,
- int multigridIterations,
- double mgTolerance,
- int mu,
- int nu1,
- int nu2,
- int baseIterations,
- double baseTolerance,
- bool instrumented);
-
- void setScaling(const Dune::FieldVector<double,blocksize0+blocksize1>& scaling)
- {
- for (int i=0; i<blocksize0; i++)
- std::get<0>(scaling_)[i] = scaling[i];
-
- for (int i=0; i<blocksize1; i++)
- std::get<1>(scaling_)[i] = scaling[i+blocksize0];
- }
+ MixedRiemannianTrustRegionSolver()
+ : NumProc(NumProc::FULL),
+
+ h1SemiNorm0_(nullptr), h1SemiNorm1_(nullptr)
+ {
+ std::fill(std::get<0>(scaling_).begin(), std::get<0>(scaling_).end(), 1.0);
+ std::fill(std::get<1>(scaling_).begin(), std::get<1>(scaling_).end(), 1.0);
+ }
+
+ /** \brief Set up the solver using a monotone multigrid method as the inner solver */
+ void setup(const GridType& grid,
+ const MixedGFEAssembler<Basis, TargetSpace0, TargetSpace1>* assembler,
+ const Basis0& basis0,
+ const Basis1& basis1,
+ const SolutionType& x,
+ const Dune::BitSetVector<blocksize0>& dirichletNodes0,
+ const Dune::BitSetVector<blocksize1>& dirichletNodes1,
+ double tolerance,
+ int maxTrustRegionSteps,
+ double initialTrustRegionRadius,
+ int multigridIterations,
+ double mgTolerance,
+ int mu,
+ int nu1,
+ int nu2,
+ int baseIterations,
+ double baseTolerance,
+ bool instrumented);
+
+ void setScaling(const Dune::FieldVector<double,blocksize0+blocksize1>& scaling)
+ {
+ for (int i=0; i<blocksize0; i++)
+ std::get<0>(scaling_)[i] = scaling[i];
+
+ for (int i=0; i<blocksize1; i++)
+ std::get<1>(scaling_)[i] = scaling[i+blocksize0];
+ }
#if 0
- void setIgnoreNodes(const Dune::BitSetVector<blocksize0>& ignoreNodes)
- {
- ignoreNodes_ = &ignoreNodes;
- Dune::shared_ptr<LoopSolver<CorrectionType> > loopSolver = std::dynamic_pointer_cast<LoopSolver<CorrectionType> >(innerSolver_);
- assert(loopSolver);
- loopSolver->iterationStep_->ignoreNodes_ = ignoreNodes_;
- }
+ void setIgnoreNodes(const Dune::BitSetVector<blocksize0>& ignoreNodes)
+ {
+ ignoreNodes_ = &ignoreNodes;
+ Dune::shared_ptr<LoopSolver<CorrectionType> > loopSolver = std::dynamic_pointer_cast<LoopSolver<CorrectionType> >(innerSolver_);
+ assert(loopSolver);
+ loopSolver->iterationStep_->ignoreNodes_ = ignoreNodes_;
+ }
#endif
- void solve();
+ void solve();
- void setInitialIterate(const SolutionType& x)
- {
- x_ = x;
- }
+ void setInitialIterate(const SolutionType& x)
+ {
+ x_ = x;
+ }
- SolutionType getSol() const
- {
- return x_;
- }
+ SolutionType getSol() const
+ {
+ return x_;
+ }
- const Statistics& getStatistics() const {return statistics_;}
+ const Statistics& getStatistics() const {return statistics_;}
protected:
#if 0
- std::unique_ptr<GUIndex> guIndex_;
+ std::unique_ptr<GUIndex> guIndex_;
#endif
- /** \brief The grid */
- const GridType* grid_;
+ /** \brief The grid */
+ const GridType* grid_;
- /** \brief The solution vectors */
- SolutionType x_;
+ /** \brief The solution vectors */
+ SolutionType x_;
- /** \brief The initial trust-region radius in the maximum-norm */
- double initialTrustRegionRadius_;
+ /** \brief The initial trust-region radius in the maximum-norm */
+ double initialTrustRegionRadius_;
- /** \brief Trust-region norm scaling */
- std::tuple<Dune::FieldVector<double,blocksize0>, Dune::FieldVector<double,blocksize1> > scaling_;
+ /** \brief Trust-region norm scaling */
+ std::tuple<Dune::FieldVector<double,blocksize0>, Dune::FieldVector<double,blocksize1> > scaling_;
- /** \brief Maximum number of trust-region steps */
- int maxTrustRegionSteps_;
+ /** \brief Maximum number of trust-region steps */
+ int maxTrustRegionSteps_;
- /** \brief Maximum number of multigrid iterations */
- int innerIterations_;
+ /** \brief Maximum number of multigrid iterations */
+ int innerIterations_;
- /** \brief Error tolerance of the multigrid QP solver */
- double innerTolerance_;
+ /** \brief Error tolerance of the multigrid QP solver */
+ double innerTolerance_;
- /** \brief Hessian matrix */
- std::unique_ptr<MatrixType> hessianMatrix_;
+ /** \brief Hessian matrix */
+ std::unique_ptr<MatrixType> hessianMatrix_;
- /** \brief The assembler for the material law */
- const MixedGFEAssembler<Basis, TargetSpace0, TargetSpace1>* assembler_;
+ /** \brief The assembler for the material law */
+ const MixedGFEAssembler<Basis, TargetSpace0, TargetSpace1>* assembler_;
- /** \brief TEMPORARY: The two separate matrices */
- std::unique_ptr<Basis0> basis0_;
- std::unique_ptr<Basis1> basis1_;
+ /** \brief TEMPORARY: The two separate matrices */
+ std::unique_ptr<Basis0> basis0_;
+ std::unique_ptr<Basis1> basis1_;
- /** \brief The solver for the quadratic inner problems */
- std::shared_ptr<Solver> innerSolver_;
+ /** \brief The solver for the quadratic inner problems */
+ std::shared_ptr<Solver> innerSolver_;
- MonotoneMGStep<MatrixType00, CorrectionType0>* mmgStep0;
- MonotoneMGStep<MatrixType11, CorrectionType1>* mmgStep1;
+ MonotoneMGStep<MatrixType00, CorrectionType0>* mmgStep0;
+ MonotoneMGStep<MatrixType11, CorrectionType1>* mmgStep1;
- double tolerance_;
+ double tolerance_;
- /** \brief Contains 'true' everywhere -- the trust-region is bounded */
- Dune::BitSetVector<blocksize0> hasObstacle0_;
- Dune::BitSetVector<blocksize1> hasObstacle1_;
+ /** \brief Contains 'true' everywhere -- the trust-region is bounded */
+ Dune::BitSetVector<blocksize0> hasObstacle0_;
+ Dune::BitSetVector<blocksize1> hasObstacle1_;
- /** \brief The Dirichlet nodes */
- const Dune::BitSetVector<blocksize0>* ignoreNodes0_;
- const Dune::BitSetVector<blocksize1>* ignoreNodes1_;
+ /** \brief The Dirichlet nodes */
+ const Dune::BitSetVector<blocksize0>* ignoreNodes0_;
+ const Dune::BitSetVector<blocksize1>* ignoreNodes1_;
- /** \brief The norm used to measure multigrid convergence */
- H1SemiNorm<CorrectionType0>* h1SemiNorm0_;
- H1SemiNorm<CorrectionType1>* h1SemiNorm1_;
+ /** \brief The norm used to measure multigrid convergence */
+ H1SemiNorm<CorrectionType0>* h1SemiNorm0_;
+ H1SemiNorm<CorrectionType1>* h1SemiNorm1_;
- /** \brief Store information about solver runs for testing */
- Statistics statistics_;
+ /** \brief Store information about solver runs for testing */
+ Statistics statistics_;
};
#include "mixedriemanniantrsolver.cc"
diff --git a/dune/gfe/neumannenergy.hh b/dune/gfe/neumannenergy.hh
index 2af52ba7..34a96f9e 100644
--- a/dune/gfe/neumannenergy.hh
+++ b/dune/gfe/neumannenergy.hh
@@ -10,95 +10,95 @@
namespace Dune::GFE {
/**
- \brief Assembles the Neumann energy for a single element on the Neumann Boundary using the Neumann Function.
-
+ \brief Assembles the Neumann energy for a single element on the Neumann Boundary using the Neumann Function.
+
This class works similarly to the class Dune::Elasticity::NeumannEnergy, where Dune::Elasticity::NeumannEnergy extends
Dune::Elasticity::LocalEnergy and Dune::GFE::NeumannEnergy extends Dune::GFE::LocalEnergy.
- */
-template<class Basis, class... TargetSpaces>
-class NeumannEnergy
- : public Dune::GFE::LocalEnergy<Basis,TargetSpaces...>
-{
- using LocalView = typename Basis::LocalView;
- using GridView = typename LocalView::GridView;
- using DT = typename GridView::Grid::ctype;
- using RT = typename Dune::GFE::LocalEnergy<Basis,TargetSpaces...>::RT;
-
- constexpr static int dim = GridView::dimension;
-
-public:
-
- /** \brief Constructor with a set of material parameters
- * \param parameters The material parameters
*/
- NeumannEnergy(const std::shared_ptr<BoundaryPatch<GridView>>& neumannBoundary,
- std::function<Dune::FieldVector<double,dim>(Dune::FieldVector<DT,dim>)> neumannFunction)
- : neumannBoundary_(neumannBoundary),
- neumannFunction_(neumannFunction)
- {}
+ template<class Basis, class ... TargetSpaces>
+ class NeumannEnergy
+ : public Dune::GFE::LocalEnergy<Basis,TargetSpaces...>
+ {
+ using LocalView = typename Basis::LocalView;
+ using GridView = typename LocalView::GridView;
+ using DT = typename GridView::Grid::ctype;
+ using RT = typename Dune::GFE::LocalEnergy<Basis,TargetSpaces...>::RT;
+
+ constexpr static int dim = GridView::dimension;
+
+ public:
- /** \brief Assemble the energy for a single element */
- RT energy(const typename Basis::LocalView& localView,
- const std::vector<TargetSpaces>&... localSolutions) const
- {
- static_assert(sizeof...(TargetSpaces) > 0, "NeumannEnergy needs at least one TargetSpace!");
+ /** \brief Constructor with a set of material parameters
+ * \param parameters The material parameters
+ */
+ NeumannEnergy(const std::shared_ptr<BoundaryPatch<GridView> >& neumannBoundary,
+ std::function<Dune::FieldVector<double,dim>(Dune::FieldVector<DT,dim>)> neumannFunction)
+ : neumannBoundary_(neumannBoundary),
+ neumannFunction_(neumannFunction)
+ {}
- using namespace Dune::Indices;
- using TargetSpace = typename std::tuple_element<0, std::tuple<TargetSpaces...> >::type;
- const std::vector<TargetSpace>& localSolution = std::get<0>(std::forward_as_tuple(localSolutions...));
+ /** \brief Assemble the energy for a single element */
+ RT energy(const typename Basis::LocalView& localView,
+ const std::vector<TargetSpaces>& ... localSolutions) const
+ {
+ static_assert(sizeof...(TargetSpaces) > 0, "NeumannEnergy needs at least one TargetSpace!");
- const auto& localFiniteElement = localView.tree().child(_0,0).finiteElement();
- const auto& element = localView.element();
+ using namespace Dune::Indices;
+ using TargetSpace = typename std::tuple_element<0, std::tuple<TargetSpaces...> >::type;
+ const std::vector<TargetSpace>& localSolution = std::get<0>(std::forward_as_tuple(localSolutions ...));
- RT energy = 0;
+ const auto& localFiniteElement = localView.tree().child(_0,0).finiteElement();
+ const auto& element = localView.element();
- for (auto&& intersection : intersections(neumannBoundary_->gridView(), element)) {
+ RT energy = 0;
- if (not neumannBoundary_ or not neumannBoundary_->contains(intersection))
- continue;
+ for (auto&& intersection : intersections(neumannBoundary_->gridView(), element)) {
- int quadOrder = (element.type().isSimplex()) ? localFiniteElement.localBasis().order()
+ if (not neumannBoundary_ or not neumannBoundary_->contains(intersection))
+ continue;
+
+ int quadOrder = (element.type().isSimplex()) ? localFiniteElement.localBasis().order()
: localFiniteElement.localBasis().order() * dim;
- const auto& quad = Dune::QuadratureRules<DT, dim-1>::rule(intersection.type(), quadOrder);
+ const auto& quad = Dune::QuadratureRules<DT, dim-1>::rule(intersection.type(), quadOrder);
+
+ for (size_t pt=0; pt<quad.size(); pt++) {
- for (size_t pt=0; pt<quad.size(); pt++) {
+ // Local position of the quadrature point
+ const Dune::FieldVector<DT,dim>& quadPos = intersection.geometryInInside().global(quad[pt].position());
- // Local position of the quadrature point
- const Dune::FieldVector<DT,dim>& quadPos = intersection.geometryInInside().global(quad[pt].position());
+ const auto integrationElement = intersection.geometry().integrationElement(quad[pt].position());
- const auto integrationElement = intersection.geometry().integrationElement(quad[pt].position());
+ // The value of the local function
+ std::vector<Dune::FieldVector<DT,1> > shapeFunctionValues;
+ localFiniteElement.localBasis().evaluateFunction(quadPos, shapeFunctionValues);
- // The value of the local function
- std::vector<Dune::FieldVector<DT,1> > shapeFunctionValues;
- localFiniteElement.localBasis().evaluateFunction(quadPos, shapeFunctionValues);
+ Dune::FieldVector<RT,dim> value(0);
+ for (size_t i=0; i<localFiniteElement.size(); i++)
+ for (int j=0; j<dim; j++)
+ value[j] += shapeFunctionValues[i] * localSolution[i][j];
- Dune::FieldVector<RT,dim> value(0);
- for (size_t i=0; i<localFiniteElement.size(); i++)
- for (int j=0; j<dim; j++)
- value[j] += shapeFunctionValues[i] * localSolution[i][j];
+ // Value of the Neumann data at the current position
+ auto neumannValue = neumannFunction_( intersection.geometry().global(quad[pt].position()) );
- // Value of the Neumann data at the current position
- auto neumannValue = neumannFunction_( intersection.geometry().global(quad[pt].position()) );
+ // Only translational dofs are affected by the Neumann force
+ for (size_t i=0; i<neumannValue.size(); i++)
+ energy += (neumannValue[i] * value[i]) * quad[pt].weight() * integrationElement;
- // Only translational dofs are affected by the Neumann force
- for (size_t i=0; i<neumannValue.size(); i++)
- energy += (neumannValue[i] * value[i]) * quad[pt].weight() * integrationElement;
+ }
}
+ return energy;
}
- return energy;
- }
-
-private:
- /** \brief The Neumann boundary */
- const std::shared_ptr<BoundaryPatch<GridView>> neumannBoundary_;
+ private:
+ /** \brief The Neumann boundary */
+ const std::shared_ptr<BoundaryPatch<GridView> > neumannBoundary_;
- /** \brief The function implementing the Neumann data */
- std::function<Dune::FieldVector<double,dim>(Dune::FieldVector<DT,dim>)> neumannFunction_;
-};
+ /** \brief The function implementing the Neumann data */
+ std::function<Dune::FieldVector<double,dim>(Dune::FieldVector<DT,dim>)> neumannFunction_;
+ };
} // namespace Dune::GFE
#endif //#ifndef DUNE_GFE_NEUMANNENERGY_HH
diff --git a/dune/gfe/parallel/globalmapper.hh b/dune/gfe/parallel/globalmapper.hh
index 4cf617dd..9aad9c30 100644
--- a/dune/gfe/parallel/globalmapper.hh
+++ b/dune/gfe/parallel/globalmapper.hh
@@ -26,8 +26,8 @@ namespace Dune {
{
DofMap dofmap = Dune::ParMG::entitiesToDofsMap(&basis);
Master m = Dune::ParMG::entityMasterRank(basis.gridView(), [&](int, int codim) -> bool {
- return dofmap.codimSet().test(codim);
- });
+ return dofmap.codimSet().test(codim);
+ });
globalDof_ = globalDof(basis,m, dofmap);
diff --git a/dune/gfe/parallel/globalp1mapper.hh b/dune/gfe/parallel/globalp1mapper.hh
index 3b2fa730..90efa155 100644
--- a/dune/gfe/parallel/globalp1mapper.hh
+++ b/dune/gfe/parallel/globalp1mapper.hh
@@ -14,12 +14,12 @@ namespace Dune {
using GridView = typename Basis::GridView;
using P1BasisMapper = MultipleCodimMultipleGeomTypeMapper<GridView>;
- public:
+ public:
/** \brief The integer number type used for indices */
using typename GlobalMapper<Basis>::Index;
GlobalP1Mapper(const typename Basis::GridView& gridView)
- : GlobalMapper<Basis>(gridView),
+ : GlobalMapper<Basis>(gridView),
p1Mapper_(gridView,mcmgVertexLayout())
{
#if !HAVE_DUNE_PARMG
diff --git a/dune/gfe/parallel/globalp2mapper.hh b/dune/gfe/parallel/globalp2mapper.hh
index fad3181d..fbecb00b 100644
--- a/dune/gfe/parallel/globalp2mapper.hh
+++ b/dune/gfe/parallel/globalp2mapper.hh
@@ -52,17 +52,17 @@ namespace Dune {
int globalIndex;
switch (codim)
{
- case 1: // vertex dofs
- globalIndex = globalVertexIndex.index(element.template subEntity<1>(entity));
- break;
+ case 1 : // vertex dofs
+ globalIndex = globalVertexIndex.index(element.template subEntity<1>(entity));
+ break;
- case 0: // element dofs
- globalIndex = globalElementIndex.index(element.template subEntity<0>(entity))
- + globalVertexIndex.size(1);
- break;
+ case 0 : // element dofs
+ globalIndex = globalElementIndex.index(element.template subEntity<0>(entity))
+ + globalVertexIndex.size(1);
+ break;
- default:
- DUNE_THROW(Dune::Exception, "Impossible codimension!");
+ default :
+ DUNE_THROW(Dune::Exception, "Impossible codimension!");
}
localGlobalMap_[localIndex] = globalIndex;
@@ -92,22 +92,22 @@ namespace Dune {
int globalIndex;
switch (codim)
{
- case 2: // vertex dofs
- globalIndex = globalVertexIndex.index(element.template subEntity<GridView::dimension>(entity));
- break;
-
- case 1: // edge dofs
- globalIndex = globalEdgeIndex.index(element.template subEntity<1>(entity)) + globalVertexIndex.size(2);
- break;
-
- case 0: // element dofs
- globalIndex = globalElementIndex.index(element.template subEntity<0>(entity))
- + globalEdgeIndex.size(1)
- + globalVertexIndex.size(2);
- break;
-
- default:
- DUNE_THROW(Dune::Exception, "Impossible codimension!");
+ case 2 : // vertex dofs
+ globalIndex = globalVertexIndex.index(element.template subEntity<GridView::dimension>(entity));
+ break;
+
+ case 1 : // edge dofs
+ globalIndex = globalEdgeIndex.index(element.template subEntity<1>(entity)) + globalVertexIndex.size(2);
+ break;
+
+ case 0 : // element dofs
+ globalIndex = globalElementIndex.index(element.template subEntity<0>(entity))
+ + globalEdgeIndex.size(1)
+ + globalVertexIndex.size(2);
+ break;
+
+ default :
+ DUNE_THROW(Dune::Exception, "Impossible codimension!");
}
localGlobalMap_[localIndex] = globalIndex;
@@ -139,7 +139,7 @@ namespace Dune {
for (size_t i=0; i<localView.size(); i++)
{
if (localView.tree().finiteElement().localCoefficients().localKey(i).subEntity() == subEntity
- and localView.tree().finiteElement().localCoefficients().localKey(i).codim() == codim)
+ and localView.tree().finiteElement().localCoefficients().localKey(i).codim() == codim)
{
dofFound = true;
localIndex = localView.index(i);
diff --git a/dune/gfe/parallel/matrixcommunicator.hh b/dune/gfe/parallel/matrixcommunicator.hh
index 6387dd76..1f4e53d1 100644
--- a/dune/gfe/parallel/matrixcommunicator.hh
+++ b/dune/gfe/parallel/matrixcommunicator.hh
@@ -46,7 +46,7 @@ class MatrixCommunicator {
public:
MatrixCommunicator(const RowGlobalMapper& rowGlobalMapper, const GridView1& gridView, const LocalMapper1& localMapper1, const LocalMapper2& localMapper2, const int& root)
- : rowGlobalMapper_(rowGlobalMapper),
+ : rowGlobalMapper_(rowGlobalMapper),
columnGlobalMapper_(rowGlobalMapper),
localMapper1_(localMapper1),
localMapper2_(localMapper2),
@@ -60,7 +60,7 @@ public:
MatrixCommunicator(const RowGlobalMapper& rowGlobalMapper, const ColumnGlobalMapper& columnGlobalMapper,
const GridView1& gridView1, const GridView2& gridView2,
const LocalMapper1& localMapper1, const LocalMapper2& localMapper2, const int& root)
- : rowGlobalMapper_(rowGlobalMapper),
+ : rowGlobalMapper_(rowGlobalMapper),
columnGlobalMapper_(columnGlobalMapper),
localMapper1_(localMapper1),
localMapper2_(localMapper2),
diff --git a/dune/gfe/parallel/p2mapper.hh b/dune/gfe/parallel/p2mapper.hh
index aa1b62cc..5dcf6969 100644
--- a/dune/gfe/parallel/p2mapper.hh
+++ b/dune/gfe/parallel/p2mapper.hh
@@ -19,7 +19,7 @@ public:
typedef typename Dune::Functions::LagrangeBasis<GridView,2>::MultiIndex::value_type Index;
P2BasisMapper(const GridView& gridView)
- : p2Basis_(gridView)
+ : p2Basis_(gridView)
{}
std::size_t size() const
@@ -50,4 +50,3 @@ public:
};
#endif
-
diff --git a/dune/gfe/parallel/vectorcommunicator.hh b/dune/gfe/parallel/vectorcommunicator.hh
index 88d29fc2..d83cc649 100644
--- a/dune/gfe/parallel/vectorcommunicator.hh
+++ b/dune/gfe/parallel/vectorcommunicator.hh
@@ -18,7 +18,7 @@ class VectorCommunicator {
TransferVectorTuple() {}
TransferVectorTuple(const size_t& r, const EntryType& e)
- : globalIndex_(r),
+ : globalIndex_(r),
value_(e) {}
};
@@ -29,7 +29,7 @@ private:
// Translate vector entries
for (size_t k=0; k<localVector.size(); k++)
- localVectorEntries.push_back(TransferVectorTuple(guIndex.index(k), localVector[k]));
+ localVectorEntries.push_back(TransferVectorTuple(guIndex.index(k), localVector[k]));
// Get number of vector entries on each process
localVectorEntriesSizes = MPIFunctions::shareSizes(communicator_, localVectorEntries.size());
@@ -42,7 +42,7 @@ public:
VectorCommunicator(const GUIndex& gi,
const Communicator& communicator,
const int& root)
- : guIndex(gi), communicator_(communicator), root_rank(root)
+ : guIndex(gi), communicator_(communicator), root_rank(root)
{}
VectorType reduceAdd(const VectorType& localVector)
diff --git a/dune/gfe/polardecomposition.hh b/dune/gfe/polardecomposition.hh
index 5b73a5cd..b25e5416 100644
--- a/dune/gfe/polardecomposition.hh
+++ b/dune/gfe/polardecomposition.hh
@@ -15,312 +15,312 @@
namespace Dune::GFE {
- class PolarDecomposition
+ class PolarDecomposition
+ {
+ public:
+
+ /** \brief Compute the polar factor of a matrix iteratively
+ Attention: For matrices that are quite far away from an orthogonal matrix,
+ this might return a matrix with determinant = -1 ! */
+ template <class field_type>
+ FieldMatrix<field_type,3,3> operator() (const FieldMatrix<field_type,3,3>& matrix, double tol = 0.001) const
{
- public:
-
- /** \brief Compute the polar factor of a matrix iteratively
- Attention: For matrices that are quite far away from an orthogonal matrix,
- this might return a matrix with determinant = -1 ! */
- template <class field_type>
- FieldMatrix<field_type,3,3> operator() (const FieldMatrix<field_type,3,3>& matrix, double tol = 0.001) const
- {
- size_t maxIterations = 100;
- // Use Higham's method
- auto polar = matrix;
- for (size_t i=0; i<maxIterations; i++)
- {
- auto oldPolar = polar;
- auto polarInvert = polar;
- polarInvert.invert();
- for (size_t j=0; j<polar.N(); j++)
- for (size_t k=0; k<polar.M(); k++)
- polar[j][k] = 0.5 * (polar[j][k] + polarInvert[k][j]);
- oldPolar -= polar;
- if (oldPolar.frobenius_norm() < tol) {
- break;
- }
- }
- return polar;
+ size_t maxIterations = 100;
+ // Use Higham's method
+ auto polar = matrix;
+ for (size_t i=0; i<maxIterations; i++)
+ {
+ auto oldPolar = polar;
+ auto polarInvert = polar;
+ polarInvert.invert();
+ for (size_t j=0; j<polar.N(); j++)
+ for (size_t k=0; k<polar.M(); k++)
+ polar[j][k] = 0.5 * (polar[j][k] + polarInvert[k][j]);
+ oldPolar -= polar;
+ if (oldPolar.frobenius_norm() < tol) {
+ break;
}
- };
-
- class HighamNoferiniPolarDecomposition
+ }
+ return polar;
+ }
+ };
+
+ class HighamNoferiniPolarDecomposition
+ {
+ public:
+ /** \brief Compute the polar factor part of a matrix using the paper
+ "An algorithm to compute the polar decomposition of a 3 × 3 matrix" from Higham and Noferini (2015)
+ * \param matrix Compute the polar factor part of this matrix
+ * \param tau1 tolerance, default value taken from Higham and Noferini
+ * \param tau2 tolerance, default value taken from Higham and Noferini
+ */
+ template <class field_type>
+ FieldMatrix<field_type, 3, 3> operator() (const FieldMatrix<field_type, 3, 3>& matrix, double tau1 = 0.0001, double tau2 = 0.0001) const
{
- public:
- /** \brief Compute the polar factor part of a matrix using the paper
- "An algorithm to compute the polar decomposition of a 3 × 3 matrix" from Higham and Noferini (2015)
- * \param matrix Compute the polar factor part of this matrix
- * \param tau1 tolerance, default value taken from Higham and Noferini
- * \param tau2 tolerance, default value taken from Higham and Noferini
- */
- template <class field_type>
- FieldMatrix<field_type, 3, 3> operator() (const FieldMatrix<field_type, 3, 3>& matrix, double tau1 = 0.0001, double tau2 = 0.0001) const
- {
- auto normedMatrix = matrix;
- normedMatrix /= normedMatrix.frobenius_norm();
- FieldMatrix<field_type,4,4> bilinearmatrix = bilinearMatrix(normedMatrix);
- auto detB = determinantLaplace(bilinearmatrix);
- auto detM = normedMatrix.determinant();
- field_type domEV = 0;
- if (detM < 0) {
- detM = -detM;
- bilinearmatrix = -bilinearmatrix;
- }
-
- if ( detB + 1./3 > tau1) { // estimate dominant eigenvalue if well separated => use formula
- domEV = dominantEV( detB, detM );
- } else { // eignevalue nearly a double root => use newtons method
- auto coefficients = characteristicCoefficients(bilinearmatrix);
- domEV = dominantEVNewton(coefficients,detB);
- }
- // compute iterationmatrix B_S
- FieldMatrix<field_type,4,4> BS = {{domEV,0,0,0},{0,domEV,0,0},{0,0,domEV,0},{0,0,0,domEV}};
- BS -= bilinearmatrix;
- if (detB < 1 - tau2) {
- Rotation<field_type,3> v(obtainQuaternion(BS));
- FieldMatrix<field_type,3,3> mat;
- v.matrix(mat);
- return mat;
- } else {
- DUNE_THROW(NotImplemented, "The eigenvalues are not wellseparated => inverse iteration won't converge!");
- }
- }
-
- protected:
-
- /** \brief Compute the bilinear matrix for a given 3x3 matrix*/
- template <class field_type>
- static FieldMatrix<field_type,4,4> bilinearMatrix(const FieldMatrix<field_type,3,3> matrix)
- {
- FieldMatrix<field_type,4,4> bilinearmatrix;
- bilinearmatrix[0][0] = matrix[0][0] + matrix[1][1] + matrix[2][2];
- bilinearmatrix[0][1] = matrix[1][2] - matrix[2][1];
- bilinearmatrix[0][2] = matrix[2][0] - matrix[0][2];
- bilinearmatrix[0][3] = matrix[0][1] - matrix[1][0];
- bilinearmatrix[1][0] = bilinearmatrix[0][1];
- bilinearmatrix[1][1] = matrix[0][0] - matrix[1][1] - matrix[2][2];
- bilinearmatrix[1][2] = matrix[0][1] + matrix[1][0];
- bilinearmatrix[1][3] = matrix[2][0] + matrix[0][2];
- bilinearmatrix[2][0] = bilinearmatrix[0][2];
- bilinearmatrix[2][1] = bilinearmatrix[1][2];
- bilinearmatrix[2][2] = matrix[1][1] - matrix[0][0] - matrix[2][2];
- bilinearmatrix[2][3] = matrix[1][2] + matrix[2][1];
- bilinearmatrix[3][0] = bilinearmatrix[0][3];
- bilinearmatrix[3][1] = bilinearmatrix[1][3];
- bilinearmatrix[3][2] = bilinearmatrix[2][3];
- bilinearmatrix[3][3] = matrix[2][2] - matrix[0][0] - matrix[1][1];
- return bilinearmatrix;
- }
-
- /** \brief Compute the determinant of a 4x4 matrix using the Laplace method
- The implementation is faster than calling matrix.determinant()*/
- template <class field_type>
- static field_type determinantLaplace( const FieldMatrix<field_type,4,4>& matrix)
- {
- field_type T2233 = matrix[2][2] * matrix[3][3];
- field_type T3223 = matrix[3][2] * matrix[2][3];
- field_type T1 = T2233 - T3223;
-
- field_type T1233 = matrix[1][2] * matrix[3][3];
- field_type T3213 = matrix[3][2] * matrix[1][3];
- field_type T2 = T1233 - T3213;
-
- field_type T1223 = matrix[1][2] * matrix[2][3];
- field_type T2213 = matrix[2][2] * matrix[1][3];
- field_type T3 = T1223 - T2213;
-
- field_type T0233 = matrix[0][2] * matrix[3][3];
- field_type T3203 = matrix[3][2] * matrix[0][3];
- field_type T4 = T3203 - T0233;
-
- field_type T0223 = matrix[0][2] * matrix[2][3];
- field_type T2203 = matrix[2][2] * matrix[0][3];
- field_type T5 = T0223- T2203;
-
- field_type T0213 = matrix[0][2] * matrix[1][3];
- field_type T1203 = matrix[1][2] * matrix[0][3];
- field_type T6 = T0213-T1203;
-
- return matrix[0][0] * (matrix[1][1] * T1 - matrix[2][1] * T3 + matrix[3][1] * T3)
- - matrix[1][0] * (matrix[0][1] * T1 + matrix[2][1] * T4 + matrix[3][1] * T5)
- + matrix[2][0] * (matrix[0][1] * T2 + matrix[1][1] * T4 + matrix[3][1] * T6)
- - matrix[3][0] * (matrix[0][1] * T2 - matrix[1][1] * T5 + matrix[2][1] * T6);
- }
-
- /** \brief Return the factors a,b,c of the characteristic polynomial x^4+a*x^3+b*x^2+c*x + detB */
- template <class field_type>
- static FieldVector<field_type,3> characteristicCoefficients(const FieldMatrix<field_type,4,4>& matrix)
- {
- field_type a = - Dune::GFE::trace(matrix);
- field_type b = matrix[0][0] * (matrix[1][1] + matrix[2][2] + matrix[3][3])
- + matrix[3][3] * (matrix[1][1] + matrix[2][2])
- - (matrix[1][0] * matrix[0][1] + matrix[2][0] * matrix[0][2] +
- matrix[3][0] * matrix[0][3] + matrix[1][2] * matrix[2][1] +
- matrix[1][3] * matrix[3][1] + matrix[3][2] * matrix[2][3]);
-
- field_type c = matrix[0][0] * (matrix[1][2] * matrix[2][1] + matrix[1][3] * matrix[3][1] + matrix[2][3] * matrix[3][2] -(matrix[2][2] * matrix[3][3] + matrix[1][1] * (matrix[2][2] + matrix[3][3])))
- + matrix[0][1] * (matrix[1][0] * (matrix[2][2] + matrix[3][3]) -(matrix[1][2] * matrix[2][0] + matrix[1][3] * matrix[3][0]))
- + matrix[0][2] * (matrix[2][0] * (matrix[1][1] + matrix[3][3]) -(matrix[1][0] * matrix[2][1] + matrix[2][3] * matrix[3][0]))
- + matrix[0][3] * (matrix[3][0] * (matrix[1][1] + matrix[2][2]) -(matrix[1][0] * matrix[3][1] + matrix[2][0] * matrix[3][2]))
- + matrix[1][1] * (matrix[2][3] * matrix[3][2] - matrix[2][2] * matrix[3][3])
- + matrix[1][2] * (matrix[2][1] * matrix[3][3] - matrix[2][3] * matrix[3][1])
- + matrix[1][3] * (matrix[2][2] * matrix[3][1] - matrix[2][1] * matrix[3][2]);
- return {a, b, c};
- }
-
- /** \brief Return the dominant Eigenvalue of the matrix B */
- template <class field_type>
- static field_type dominantEV(field_type detB, field_type detM )
- {
- auto c = 8 * detM;
- auto sigma0 = 1 + 3 * detB;
- auto sigma1 = 27/16*c*c + 9 * detB - 1;
- auto alpha = sigma1/std::pow(sigma0, 1.5 );
- auto z = 4/3 * (1 + std::sqrt(sigma0) * std::cos(std::acos(alpha)/3));
- auto s = std::sqrt(z)/ 2;
- auto x = 4-z+c/s;
- if (x > 0)
- return s + std::sqrt(x)/2;
- else
- return s;
- }
-
- /** \brief Return the dominant Eigenvalue of the matrix B.
- This algorithm corresponds to Algorithm 3.4 in
- "An algorithm to compute the polar decomposition
- of a 3 × 3 matrix" from Higham and Noferini (2015)
- * \param coefficients Coefficients of the characteristic polynomial for the matrix b
- * \param detB Determinant of the matrix B
- * \param tol Tolerance for the Newton method, the value is taken from the paper by Higham and Noferini
- */
- template <class field_type>
- static field_type dominantEVNewton(const FieldVector<field_type,3>& coefficients, field_type detB, double tol = 10e-5)
- {
- field_type charPol = 0;
- field_type charPolDeriv = 0;
- field_type lambdaOld = 3;
- field_type domEV = std::sqrt(3);
- while ((lambdaOld - domEV)/domEV > tol) {
- lambdaOld = domEV;
- charPol = detB + domEV*( coefficients[2] + domEV*( coefficients[1] + domEV*( coefficients[0]+ domEV ) ) );
- charPolDeriv= coefficients[2] + domEV * ( 2*coefficients[1]+ domEV * ( 3*coefficients[0] + 4*domEV) );
- domEV = domEV- charPol / charPolDeriv;
+ auto normedMatrix = matrix;
+ normedMatrix /= normedMatrix.frobenius_norm();
+ FieldMatrix<field_type,4,4> bilinearmatrix = bilinearMatrix(normedMatrix);
+ auto detB = determinantLaplace(bilinearmatrix);
+ auto detM = normedMatrix.determinant();
+ field_type domEV = 0;
+ if (detM < 0) {
+ detM = -detM;
+ bilinearmatrix = -bilinearmatrix;
+ }
+
+ if ( detB + 1./3 > tau1) { // estimate dominant eigenvalue if well separated => use formula
+ domEV = dominantEV( detB, detM );
+ } else { // eignevalue nearly a double root => use newtons method
+ auto coefficients = characteristicCoefficients(bilinearmatrix);
+ domEV = dominantEVNewton(coefficients,detB);
+ }
+ // compute iterationmatrix B_S
+ FieldMatrix<field_type,4,4> BS = {{domEV,0,0,0},{0,domEV,0,0},{0,0,domEV,0},{0,0,0,domEV}};
+ BS -= bilinearmatrix;
+ if (detB < 1 - tau2) {
+ Rotation<field_type,3> v(obtainQuaternion(BS));
+ FieldMatrix<field_type,3,3> mat;
+ v.matrix(mat);
+ return mat;
+ } else {
+ DUNE_THROW(NotImplemented, "The eigenvalues are not wellseparated => inverse iteration won't converge!");
+ }
+ }
+
+ protected:
+
+ /** \brief Compute the bilinear matrix for a given 3x3 matrix*/
+ template <class field_type>
+ static FieldMatrix<field_type,4,4> bilinearMatrix(const FieldMatrix<field_type,3,3> matrix)
+ {
+ FieldMatrix<field_type,4,4> bilinearmatrix;
+ bilinearmatrix[0][0] = matrix[0][0] + matrix[1][1] + matrix[2][2];
+ bilinearmatrix[0][1] = matrix[1][2] - matrix[2][1];
+ bilinearmatrix[0][2] = matrix[2][0] - matrix[0][2];
+ bilinearmatrix[0][3] = matrix[0][1] - matrix[1][0];
+ bilinearmatrix[1][0] = bilinearmatrix[0][1];
+ bilinearmatrix[1][1] = matrix[0][0] - matrix[1][1] - matrix[2][2];
+ bilinearmatrix[1][2] = matrix[0][1] + matrix[1][0];
+ bilinearmatrix[1][3] = matrix[2][0] + matrix[0][2];
+ bilinearmatrix[2][0] = bilinearmatrix[0][2];
+ bilinearmatrix[2][1] = bilinearmatrix[1][2];
+ bilinearmatrix[2][2] = matrix[1][1] - matrix[0][0] - matrix[2][2];
+ bilinearmatrix[2][3] = matrix[1][2] + matrix[2][1];
+ bilinearmatrix[3][0] = bilinearmatrix[0][3];
+ bilinearmatrix[3][1] = bilinearmatrix[1][3];
+ bilinearmatrix[3][2] = bilinearmatrix[2][3];
+ bilinearmatrix[3][3] = matrix[2][2] - matrix[0][0] - matrix[1][1];
+ return bilinearmatrix;
+ }
+
+ /** \brief Compute the determinant of a 4x4 matrix using the Laplace method
+ The implementation is faster than calling matrix.determinant()*/
+ template <class field_type>
+ static field_type determinantLaplace( const FieldMatrix<field_type,4,4>& matrix)
+ {
+ field_type T2233 = matrix[2][2] * matrix[3][3];
+ field_type T3223 = matrix[3][2] * matrix[2][3];
+ field_type T1 = T2233 - T3223;
+
+ field_type T1233 = matrix[1][2] * matrix[3][3];
+ field_type T3213 = matrix[3][2] * matrix[1][3];
+ field_type T2 = T1233 - T3213;
+
+ field_type T1223 = matrix[1][2] * matrix[2][3];
+ field_type T2213 = matrix[2][2] * matrix[1][3];
+ field_type T3 = T1223 - T2213;
+
+ field_type T0233 = matrix[0][2] * matrix[3][3];
+ field_type T3203 = matrix[3][2] * matrix[0][3];
+ field_type T4 = T3203 - T0233;
+
+ field_type T0223 = matrix[0][2] * matrix[2][3];
+ field_type T2203 = matrix[2][2] * matrix[0][3];
+ field_type T5 = T0223- T2203;
+
+ field_type T0213 = matrix[0][2] * matrix[1][3];
+ field_type T1203 = matrix[1][2] * matrix[0][3];
+ field_type T6 = T0213-T1203;
+
+ return matrix[0][0] * (matrix[1][1] * T1 - matrix[2][1] * T3 + matrix[3][1] * T3)
+ - matrix[1][0] * (matrix[0][1] * T1 + matrix[2][1] * T4 + matrix[3][1] * T5)
+ + matrix[2][0] * (matrix[0][1] * T2 + matrix[1][1] * T4 + matrix[3][1] * T6)
+ - matrix[3][0] * (matrix[0][1] * T2 - matrix[1][1] * T5 + matrix[2][1] * T6);
+ }
+
+ /** \brief Return the factors a,b,c of the characteristic polynomial x^4+a*x^3+b*x^2+c*x + detB */
+ template <class field_type>
+ static FieldVector<field_type,3> characteristicCoefficients(const FieldMatrix<field_type,4,4>& matrix)
+ {
+ field_type a = - Dune::GFE::trace(matrix);
+ field_type b = matrix[0][0] * (matrix[1][1] + matrix[2][2] + matrix[3][3])
+ + matrix[3][3] * (matrix[1][1] + matrix[2][2])
+ - (matrix[1][0] * matrix[0][1] + matrix[2][0] * matrix[0][2] +
+ matrix[3][0] * matrix[0][3] + matrix[1][2] * matrix[2][1] +
+ matrix[1][3] * matrix[3][1] + matrix[3][2] * matrix[2][3]);
+
+ field_type c = matrix[0][0] * (matrix[1][2] * matrix[2][1] + matrix[1][3] * matrix[3][1] + matrix[2][3] * matrix[3][2] -(matrix[2][2] * matrix[3][3] + matrix[1][1] * (matrix[2][2] + matrix[3][3])))
+ + matrix[0][1] * (matrix[1][0] * (matrix[2][2] + matrix[3][3]) -(matrix[1][2] * matrix[2][0] + matrix[1][3] * matrix[3][0]))
+ + matrix[0][2] * (matrix[2][0] * (matrix[1][1] + matrix[3][3]) -(matrix[1][0] * matrix[2][1] + matrix[2][3] * matrix[3][0]))
+ + matrix[0][3] * (matrix[3][0] * (matrix[1][1] + matrix[2][2]) -(matrix[1][0] * matrix[3][1] + matrix[2][0] * matrix[3][2]))
+ + matrix[1][1] * (matrix[2][3] * matrix[3][2] - matrix[2][2] * matrix[3][3])
+ + matrix[1][2] * (matrix[2][1] * matrix[3][3] - matrix[2][3] * matrix[3][1])
+ + matrix[1][3] * (matrix[2][2] * matrix[3][1] - matrix[2][1] * matrix[3][2]);
+ return {a, b, c};
+ }
+
+ /** \brief Return the dominant Eigenvalue of the matrix B */
+ template <class field_type>
+ static field_type dominantEV(field_type detB, field_type detM )
+ {
+ auto c = 8 * detM;
+ auto sigma0 = 1 + 3 * detB;
+ auto sigma1 = 27/16*c*c + 9 * detB - 1;
+ auto alpha = sigma1/std::pow(sigma0, 1.5 );
+ auto z = 4/3 * (1 + std::sqrt(sigma0) * std::cos(std::acos(alpha)/3));
+ auto s = std::sqrt(z)/ 2;
+ auto x = 4-z+c/s;
+ if (x > 0)
+ return s + std::sqrt(x)/2;
+ else
+ return s;
+ }
+
+ /** \brief Return the dominant Eigenvalue of the matrix B.
+ This algorithm corresponds to Algorithm 3.4 in
+ "An algorithm to compute the polar decomposition
+ of a 3 × 3 matrix" from Higham and Noferini (2015)
+ * \param coefficients Coefficients of the characteristic polynomial for the matrix b
+ * \param detB Determinant of the matrix B
+ * \param tol Tolerance for the Newton method, the value is taken from the paper by Higham and Noferini
+ */
+ template <class field_type>
+ static field_type dominantEVNewton(const FieldVector<field_type,3>& coefficients, field_type detB, double tol = 10e-5)
+ {
+ field_type charPol = 0;
+ field_type charPolDeriv = 0;
+ field_type lambdaOld = 3;
+ field_type domEV = std::sqrt(3);
+ while ((lambdaOld - domEV)/domEV > tol) {
+ lambdaOld = domEV;
+ charPol = detB + domEV*( coefficients[2] + domEV*( coefficients[1] + domEV*( coefficients[0]+ domEV ) ) );
+ charPolDeriv= coefficients[2] + domEV * ( 2*coefficients[1]+ domEV * ( 3*coefficients[0] + 4*domEV) );
+ domEV = domEV- charPol / charPolDeriv;
+ }
+ return domEV;
+ }
+
+ /** \brief Return quaternion vector resulting from step 7 and 8 in Algorithm 3.2 from Higham and Noferini (2015)
+ Step 7: Calculate the LDLT factorization of the given matrix with diagonal pivoting
+ Step 8: Using L and the pivotmatix, calculate the vector v
+ * \param shiftedB shifted matrix B as given in chapter 3 of Higham an Noferini: shiftedB = lambda * Id - B, where lambda is the dominant eigenvalue of B
+ \returns v the respective polar factor in quaternion form
+ *\
+ */
+ template <class field_type>
+ static FieldVector<field_type,4> obtainQuaternion(const FieldMatrix<field_type,4,4> shiftedB)
+ {
+ FieldMatrix<field_type,4,4> P = 0;
+ FieldMatrix<field_type,4,4> Pleft = 0;
+ FieldMatrix<field_type,4,4> Pright = 0;
+ FieldMatrix<field_type,4,4> L = {{1,0,0,0},{0,1,0,0},{0,0,1,0},{0,0,0,1}};
+ FieldVector<field_type,4> D = {0,0,0,0};
+ FieldVector<field_type,4> Bdiag = {shiftedB[0][0], shiftedB[1][1], shiftedB[2][2], shiftedB[3][3]};
+ int maxi = 0; // Index of the maximal element
+ int secmax = 0;
+ int secmin = 0;
+ int mini = 0; // Index of the minimal element
+
+ // Find Pivotmatrix
+ for (int i = 0; i < 4; ++i) // going through the diagonal searching for the maximum
+ if ( Bdiag[maxi] < Bdiag[i] ) // found a bigger one but smaller than the older ones
+ maxi = i;
+
+ Pleft[0][maxi] = 1;
+ Pright[maxi][0] = 1; // Largest element to the first position
+
+ for (int i = 0; i < 4; ++i) // going through the diagonal searching for the minimum
+ if ( Bdiag[mini] > Bdiag[i] ) // found a smaller one but smaller than the older ones
+ mini = i;
+
+ Pleft[3][mini] = 1;
+ Pright[mini][3] = 1; // Smallest element to the last position
+
+
+ for (int i = 0; i < 4; ++i) {
+ if ( i != maxi && i != mini ) {
+ for (int j = 0; j < 4; ++j) {
+ if ( j != maxi && j != mini && j != i ) {
+ if ( Bdiag[i] < Bdiag[j] ) {
+ Pleft[1][j] = 1; // Second largest element at the second position
+ Pright[j][1] = 1;
+ Pleft[2][i] = 1; // Third largest element at the third position
+ Pright[i][2] = 1;
+ secmin = i;
+ secmax = j;
+ } else {
+ Pleft[2][j] = 1;
+ Pright[j][2] = 1;
+ Pleft[1][i] = 1;
+ Pright[i][1] = 1;
+ secmin = j;
+ secmax = i;
+ }
}
- return domEV;
+ }
}
-
- /** \brief Return quaternion vector resulting from step 7 and 8 in Algorithm 3.2 from Higham and Noferini (2015)
- Step 7: Calculate the LDLT factorization of the given matrix with diagonal pivoting
- Step 8: Using L and the pivotmatix, calculate the vector v
- * \param shiftedB shifted matrix B as given in chapter 3 of Higham an Noferini: shiftedB = lambda * Id - B, where lambda is the dominant eigenvalue of B
- \returns v the respective polar factor in quaternion form
- *\
- */
- template <class field_type>
- static FieldVector<field_type,4> obtainQuaternion(const FieldMatrix<field_type,4,4> shiftedB)
- {
- FieldMatrix<field_type,4,4> P = 0;
- FieldMatrix<field_type,4,4> Pleft = 0;
- FieldMatrix<field_type,4,4> Pright = 0;
- FieldMatrix<field_type,4,4> L = {{1,0,0,0},{0,1,0,0},{0,0,1,0},{0,0,0,1}};
- FieldVector<field_type,4> D = {0,0,0,0};
- FieldVector<field_type,4> Bdiag = {shiftedB[0][0], shiftedB[1][1], shiftedB[2][2], shiftedB[3][3]};
- int maxi = 0; // Index of the maximal element
- int secmax = 0;
- int secmin = 0;
- int mini = 0; // Index of the minimal element
-
- // Find Pivotmatrix
- for (int i = 0; i < 4; ++i) // going through the diagonal searching for the maximum
- if ( Bdiag[maxi] < Bdiag[i] ) // found a bigger one but smaller than the older ones
- maxi = i;
-
- Pleft[0][maxi] = 1;
- Pright[maxi][0] = 1; // Largest element to the first position
-
- for (int i = 0; i < 4; ++i) // going through the diagonal searching for the minimum
- if ( Bdiag[mini] > Bdiag[i] ) // found a smaller one but smaller than the older ones
- mini = i;
-
- Pleft[3][mini] = 1;
- Pright[mini][3] = 1; // Smallest element to the last position
-
-
- for (int i = 0; i < 4; ++i) {
- if ( i != maxi && i != mini ) {
- for (int j = 0; j < 4; ++j) {
- if ( j != maxi && j != mini && j != i ) {
- if ( Bdiag[i] < Bdiag[j] ) {
- Pleft[1][j] = 1; // Second largest element at the second position
- Pright[j][1] = 1;
- Pleft[2][i] = 1; // Third largest element at the third position
- Pright[i][2] = 1;
- secmin = i;
- secmax = j;
- } else {
- Pleft[2][j] = 1;
- Pright[j][2] = 1;
- Pleft[1][i] = 1;
- Pright[i][1] = 1;
- secmin = j;
- secmax = i;
- }
- }
- }
- }
- }
-
- //P = Pleft*shiftedB*Pright;
- P[maxi][maxi] = shiftedB[0][0];
- P[maxi][secmax] = shiftedB[0][1];
- P[maxi][secmin] = shiftedB[0][2];
- P[maxi][mini] = shiftedB[0][3];
-
- P[secmax][maxi] = shiftedB[1][0];
- P[secmax][secmax] = shiftedB[1][1];
- P[secmax][secmin] = shiftedB[1][2];
- P[secmax][mini] = shiftedB[1][3];
-
- P[secmin][maxi] = shiftedB[2][0];
- P[secmin][secmax] = shiftedB[2][1];
- P[secmin][secmin] = shiftedB[2][2];
- P[secmin][mini] = shiftedB[2][3];
-
- P[mini][maxi] = shiftedB[3][0];
- P[mini][secmax] = shiftedB[3][1];
- P[mini][secmin] = shiftedB[3][2];
- P[mini][mini] = shiftedB[3][3];
-
- // Choleskydecomposition
-
- for (int k = 0; k < 4; ++k) { //columns
- D[k] = P[k][k];
- for (int j = 0; j < k; ++j)//sum
- D[k] -= L[k][j]*L[k][j] * D[j];
-
- for (int i = k+1; i < 4; ++i) { //rows
- L[i][k] = P[i][k];
- for (int j = 0; j < k; ++j)//sum
- L[i][k] -= L[i][j]*L[k][j] * D[j];
- L[i][k] /= D[k];
- }
- }
-
- FieldVector<field_type,4> v = {0,0,0,0};
- FieldVector<field_type,4> unnormed = {0,0,0,1};
- auto neg = -L[3][2];
- unnormed[0] = L[1][0] * ( L[3][1] + L[2][1]*neg ) + L[2][0] * L[3][2] - L[3][0];
- unnormed[1] = L[2][1] * L[3][2] - L[3][1];
- unnormed[2] = neg;
- unnormed /= unnormed.two_norm();
- v[0] = unnormed[maxi];
- v[1] = unnormed[secmax];
- v[2] = unnormed[secmin];
- v[3] = unnormed[mini];
- return v;
+ }
+
+ //P = Pleft*shiftedB*Pright;
+ P[maxi][maxi] = shiftedB[0][0];
+ P[maxi][secmax] = shiftedB[0][1];
+ P[maxi][secmin] = shiftedB[0][2];
+ P[maxi][mini] = shiftedB[0][3];
+
+ P[secmax][maxi] = shiftedB[1][0];
+ P[secmax][secmax] = shiftedB[1][1];
+ P[secmax][secmin] = shiftedB[1][2];
+ P[secmax][mini] = shiftedB[1][3];
+
+ P[secmin][maxi] = shiftedB[2][0];
+ P[secmin][secmax] = shiftedB[2][1];
+ P[secmin][secmin] = shiftedB[2][2];
+ P[secmin][mini] = shiftedB[2][3];
+
+ P[mini][maxi] = shiftedB[3][0];
+ P[mini][secmax] = shiftedB[3][1];
+ P[mini][secmin] = shiftedB[3][2];
+ P[mini][mini] = shiftedB[3][3];
+
+ // Choleskydecomposition
+
+ for (int k = 0; k < 4; ++k) { //columns
+ D[k] = P[k][k];
+ for (int j = 0; j < k; ++j) //sum
+ D[k] -= L[k][j]*L[k][j] * D[j];
+
+ for (int i = k+1; i < 4; ++i) { //rows
+ L[i][k] = P[i][k];
+ for (int j = 0; j < k; ++j) //sum
+ L[i][k] -= L[i][j]*L[k][j] * D[j];
+ L[i][k] /= D[k];
}
- };
+ }
+
+ FieldVector<field_type,4> v = {0,0,0,0};
+ FieldVector<field_type,4> unnormed = {0,0,0,1};
+ auto neg = -L[3][2];
+ unnormed[0] = L[1][0] * ( L[3][1] + L[2][1]*neg ) + L[2][0] * L[3][2] - L[3][0];
+ unnormed[1] = L[2][1] * L[3][2] - L[3][1];
+ unnormed[2] = neg;
+ unnormed /= unnormed.two_norm();
+ v[0] = unnormed[maxi];
+ v[1] = unnormed[secmax];
+ v[2] = unnormed[secmin];
+ v[3] = unnormed[mini];
+ return v;
+ }
+ };
}
#endif
diff --git a/dune/gfe/riemannianpnsolver.cc b/dune/gfe/riemannianpnsolver.cc
index a12f4745..70452c05 100644
--- a/dune/gfe/riemannianpnsolver.cc
+++ b/dune/gfe/riemannianpnsolver.cc
@@ -22,34 +22,34 @@
#include <dune/solvers/norms/h1seminorm.hh>
// The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
-#if HAVE_MPI && (!defined(GRID_DIM) or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM) or (defined(WORLD_DIM) && WORLD_DIM < 3))
+#if HAVE_MPI && (!defined(GRID_DIM)or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM)or (defined(WORLD_DIM) && WORLD_DIM < 3))
#include <dune/gfe/parallel/matrixcommunicator.hh>
#include <dune/gfe/parallel/vectorcommunicator.hh>
#endif
template <class Basis, class TargetSpace, class Assembler>
void RiemannianProximalNewtonSolver<Basis, TargetSpace, Assembler>::
- setup(const GridType& grid,
- const Assembler* assembler,
- const SolutionType& x,
- const Dune::BitSetVector<blocksize>& dirichletNodes,
- const Dune::ParameterTree& parameterSet)
+setup(const GridType& grid,
+ const Assembler* assembler,
+ const SolutionType& x,
+ const Dune::BitSetVector<blocksize>& dirichletNodes,
+ const Dune::ParameterTree& parameterSet)
{
- if(parameterSet.get("norm", "infinity") == "infinity")
- normType_ = ErrorNormType::infinity;
- else if(parameterSet.get("norm", "infinity") == "H1-Semi")
- normType_ = ErrorNormType::H1semi;
- else
- DUNE_THROW(Dune::Exception, "Unknown norm type for stopping criterion!");
-
- setup(grid,
- assembler,
- x,
- dirichletNodes,
- parameterSet.get<double>("tolerance"),
- parameterSet.get<int>("maxProximalNewtonSteps "),
- parameterSet.get<double>("initialRegularization"),
- parameterSet.get<bool>("instrumented", 0));
+ if(parameterSet.get("norm", "infinity") == "infinity")
+ normType_ = ErrorNormType::infinity;
+ else if(parameterSet.get("norm", "infinity") == "H1-Semi")
+ normType_ = ErrorNormType::H1semi;
+ else
+ DUNE_THROW(Dune::Exception, "Unknown norm type for stopping criterion!");
+
+ setup(grid,
+ assembler,
+ x,
+ dirichletNodes,
+ parameterSet.get<double>("tolerance"),
+ parameterSet.get<int>("maxProximalNewtonSteps "),
+ parameterSet.get<double>("initialRegularization"),
+ parameterSet.get<bool>("instrumented", 0));
}
template <class Basis, class TargetSpace, class Assembler>
@@ -63,492 +63,492 @@ setup(const GridType& grid,
double initialRegularization,
bool instrumented)
{
- grid_ = &grid;
- assembler_ = assembler;
- x_ = x;
- this->tolerance_ = tolerance;
- maxProximalNewtonSteps_ = maxProximalNewtonSteps;
- initialRegularization_ = initialRegularization;
- instrumented_ = instrumented;
- ignoreNodes_ = &dirichletNodes;
-
-// The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
-#if HAVE_MPI && (!defined(GRID_DIM) or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM) or (defined(WORLD_DIM) && WORLD_DIM < 3))
- //////////////////////////////////////////////////////////////////
- // Create global numbering for matrix and vector transfer
- //////////////////////////////////////////////////////////////////
-
- globalMapper_ = std::make_unique<GlobalMapper>(grid_->leafGridView());
- // Transfer all Dirichlet data to the master processor
- VectorCommunicator<GlobalMapper, typename GridType::LeafGridView::CollectiveCommunication, Dune::BitSetVector<blocksize> > vectorComm(*globalMapper_,
- grid_->leafGridView().comm(),
- 0);
- auto globalDirichletNodes = new Dune::BitSetVector<blocksize>(vectorComm.reduceCopy(dirichletNodes));
+ grid_ = &grid;
+ assembler_ = assembler;
+ x_ = x;
+ this->tolerance_ = tolerance;
+ maxProximalNewtonSteps_ = maxProximalNewtonSteps;
+ initialRegularization_ = initialRegularization;
+ instrumented_ = instrumented;
+ ignoreNodes_ = &dirichletNodes;
+
+ // The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
+#if HAVE_MPI && (!defined(GRID_DIM)or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM)or (defined(WORLD_DIM) && WORLD_DIM < 3))
+ //////////////////////////////////////////////////////////////////
+ // Create global numbering for matrix and vector transfer
+ //////////////////////////////////////////////////////////////////
+
+ globalMapper_ = std::make_unique<GlobalMapper>(grid_->leafGridView());
+ // Transfer all Dirichlet data to the master processor
+ VectorCommunicator<GlobalMapper, typename GridType::LeafGridView::CollectiveCommunication, Dune::BitSetVector<blocksize> > vectorComm(*globalMapper_,
+ grid_->leafGridView().comm(),
+ 0);
+ auto globalDirichletNodes = new Dune::BitSetVector<blocksize>(vectorComm.reduceCopy(dirichletNodes));
#else
- auto globalDirichletNodes = new Dune::BitSetVector<blocksize>(dirichletNodes);
+ auto globalDirichletNodes = new Dune::BitSetVector<blocksize>(dirichletNodes);
#endif
- // //////////////////////////////////////////////////////////////////////////////////////
- // Assemble a Laplace matrix to create a norm that's equivalent to the H1-norm
- // //////////////////////////////////////////////////////////////////////////////////////
+ // //////////////////////////////////////////////////////////////////////////////////////
+ // Assemble a Laplace matrix to create a norm that's equivalent to the H1-norm
+ // //////////////////////////////////////////////////////////////////////////////////////
- const Basis& basis = assembler_->getBasis();
- Dune::Fufem::DuneFunctionsOperatorAssembler<Basis,Basis> operatorAssembler(basis, basis);
+ const Basis& basis = assembler_->getBasis();
+ Dune::Fufem::DuneFunctionsOperatorAssembler<Basis,Basis> operatorAssembler(basis, basis);
- Dune::Fufem::LaplaceAssembler laplaceStiffness;
- typedef Dune::BCRSMatrix<Dune::FieldMatrix<double,1,1> > ScalarMatrixType;
- ScalarMatrixType localA;
+ Dune::Fufem::LaplaceAssembler laplaceStiffness;
+ typedef Dune::BCRSMatrix<Dune::FieldMatrix<double,1,1> > ScalarMatrixType;
+ ScalarMatrixType localA;
- operatorAssembler.assembleBulk(Dune::Fufem::istlMatrixBackend(localA), laplaceStiffness);
+ operatorAssembler.assembleBulk(Dune::Fufem::istlMatrixBackend(localA), laplaceStiffness);
-// The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
-#if HAVE_MPI && (!defined(GRID_DIM) or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM) or (defined(WORLD_DIM) && WORLD_DIM < 3))
- LocalMapper localMapper = MapperFactory<Basis>::createLocalMapper(grid_->leafGridView());
-
- MatrixCommunicator<GlobalMapper,
- typename GridType::LeafGridView,
- typename GridType::LeafGridView,
- ScalarMatrixType,
- LocalMapper,
- LocalMapper> matrixComm(*globalMapper_, grid_->leafGridView(), localMapper, localMapper, 0);
- if (instrumented_) {
- auto A = std::make_shared<ScalarMatrixType>(matrixComm.reduceAdd(localA));
+ // The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
+#if HAVE_MPI && (!defined(GRID_DIM)or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM)or (defined(WORLD_DIM) && WORLD_DIM < 3))
+ LocalMapper localMapper = MapperFactory<Basis>::createLocalMapper(grid_->leafGridView());
+
+ MatrixCommunicator<GlobalMapper,
+ typename GridType::LeafGridView,
+ typename GridType::LeafGridView,
+ ScalarMatrixType,
+ LocalMapper,
+ LocalMapper> matrixComm(*globalMapper_, grid_->leafGridView(), localMapper, localMapper, 0);
+ if (instrumented_) {
+ auto A = std::make_shared<ScalarMatrixType>(matrixComm.reduceAdd(localA));
#else
- if (instrumented_) {
- auto A = std::make_shared<ScalarMatrixType>(localA);
+ if (instrumented_) {
+ auto A = std::make_shared<ScalarMatrixType>(localA);
#endif
- h1SemiNorm_ = std::make_shared<H1SemiNorm<CorrectionType> >(A);
- }
- //////////////////////////////////////////////////////////////////
- // Create the inner solver using a cholmod solver
- //////////////////////////////////////////////////////////////////
+ h1SemiNorm_ = std::make_shared<H1SemiNorm<CorrectionType> >(A);
+ }
+ //////////////////////////////////////////////////////////////////
+ // Create the inner solver using a cholmod solver
+ //////////////////////////////////////////////////////////////////
#if DUNE_VERSION_GTE(DUNE_SOLVERS, 2, 8)
- innerSolver_ = std::make_shared<Dune::Solvers::CholmodSolver<MatrixType,CorrectionType> >();
+ innerSolver_ = std::make_shared<Dune::Solvers::CholmodSolver<MatrixType,CorrectionType> >();
#else
- std::cout << "using umfpacksolver" << std::endl;
- innerSolver_ = std::make_shared<Dune::Solvers::UMFPackSolver<MatrixType,CorrectionType> >();
+ std::cout << "using umfpacksolver" << std::endl;
+ innerSolver_ = std::make_shared<Dune::Solvers::UMFPackSolver<MatrixType,CorrectionType> >();
#endif
- innerSolver_->setIgnore(*globalDirichletNodes);
+ innerSolver_->setIgnore(*globalDirichletNodes);
- // //////////////////////////////////////////////////////////////////////////////////////
- // Assemble a mass matrix to create a norm that's equivalent to the L2-norm
- // This will be used to monitor the gradient
- // //////////////////////////////////////////////////////////////////////////////////////
+ // //////////////////////////////////////////////////////////////////////////////////////
+ // Assemble a mass matrix to create a norm that's equivalent to the L2-norm
+ // This will be used to monitor the gradient
+ // //////////////////////////////////////////////////////////////////////////////////////
- Dune::Fufem::MassAssembler massStiffness;
- ScalarMatrixType localMassMatrix;
+ Dune::Fufem::MassAssembler massStiffness;
+ ScalarMatrixType localMassMatrix;
- operatorAssembler.assembleBulk(Dune::Fufem::istlMatrixBackend(localMassMatrix), massStiffness);
+ operatorAssembler.assembleBulk(Dune::Fufem::istlMatrixBackend(localMassMatrix), massStiffness);
-// The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
-#if HAVE_MPI && (!defined(GRID_DIM) or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM) or (defined(WORLD_DIM) && WORLD_DIM < 3))
- auto massMatrix = std::make_shared<ScalarMatrixType>(matrixComm.reduceAdd(localMassMatrix));
+ // The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
+#if HAVE_MPI && (!defined(GRID_DIM)or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM)or (defined(WORLD_DIM) && WORLD_DIM < 3))
+ auto massMatrix = std::make_shared<ScalarMatrixType>(matrixComm.reduceAdd(localMassMatrix));
#else
- auto massMatrix = std::make_shared<ScalarMatrixType>(localMassMatrix);
+ auto massMatrix = std::make_shared<ScalarMatrixType>(localMassMatrix);
#endif
- l2Norm_ = std::make_shared<H1SemiNorm<CorrectionType> >(massMatrix);
+ l2Norm_ = std::make_shared<H1SemiNorm<CorrectionType> >(massMatrix);
- // Write all intermediate solutions, if requested
- if (instrumented_
- && dynamic_cast<IterativeSolver<CorrectionType>*>(innerSolver_.get()))
- dynamic_cast<IterativeSolver<CorrectionType>*>(innerSolver_.get())->historyBuffer_ = "tmp/mgHistory";
+ // Write all intermediate solutions, if requested
+ if (instrumented_
+ && dynamic_cast<IterativeSolver<CorrectionType>*>(innerSolver_.get()))
+ dynamic_cast<IterativeSolver<CorrectionType>*>(innerSolver_.get())->historyBuffer_ = "tmp/mgHistory";
- // ////////////////////////////////////////////////////////////
- // Create Hessian matrix and its occupation structure
- // ////////////////////////////////////////////////////////////
+ // ////////////////////////////////////////////////////////////
+ // Create Hessian matrix and its occupation structure
+ // ////////////////////////////////////////////////////////////
- hessianMatrix_ = std::make_unique<MatrixType>();
- Dune::MatrixIndexSet indices(grid_->size(1), grid_->size(1));
- assembler_->getNeighborsPerVertex(indices);
- indices.exportIdx(*hessianMatrix_);
+ hessianMatrix_ = std::make_unique<MatrixType>();
+ Dune::MatrixIndexSet indices(grid_->size(1), grid_->size(1));
+ assembler_->getNeighborsPerVertex(indices);
+ indices.exportIdx(*hessianMatrix_);
}
template <class Basis, class TargetSpace, class Assembler>
void RiemannianProximalNewtonSolver<Basis,TargetSpace,Assembler>::solve()
{
- int rank = grid_->comm().rank();
-
- // /////////////////////////////////////////////////////
- // Set up the log file, if requested
- // /////////////////////////////////////////////////////
- FILE* fp = nullptr;
- if (instrumented_) {
-
- fp = fopen("statistics", "w");
- if (!fp)
- DUNE_THROW(Dune::IOError, "Couldn't open statistics file for writing!");
-
+ int rank = grid_->comm().rank();
+
+ // /////////////////////////////////////////////////////
+ // Set up the log file, if requested
+ // /////////////////////////////////////////////////////
+ FILE* fp = nullptr;
+ if (instrumented_) {
+
+ fp = fopen("statistics", "w");
+ if (!fp)
+ DUNE_THROW(Dune::IOError, "Couldn't open statistics file for writing!");
+
+ }
+
+ // /////////////////////////////////////////////////////
+ // Proximal Newton Solver
+ // /////////////////////////////////////////////////////
+
+ Dune::Timer energyTimer;
+ double oldEnergy = assembler_->computeEnergy(x_);
+ if (this->verbosity_ == Solver::FULL)
+ std::cout << "Energy computation took " << energyTimer.elapsed() << " sec." << std::endl;
+
+
+ oldEnergy = grid_->comm().sum(oldEnergy);
+
+ bool recomputeGradientHessian = true;
+ CorrectionType rhs, rhs_global;
+ MatrixType stiffnessMatrix;
+ // The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
+#if HAVE_MPI && (!defined(GRID_DIM)or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM)or (defined(WORLD_DIM) && WORLD_DIM < 3))
+ VectorCommunicator<GlobalMapper, typename GridType::LeafGridView::CollectiveCommunication, CorrectionType> vectorComm(*globalMapper_,
+ grid_->leafGridView().comm(),
+ 0);
+ LocalMapper localMapper = MapperFactory<Basis>::createLocalMapper(grid_->leafGridView());
+ MatrixCommunicator<GlobalMapper,
+ typename GridType::LeafGridView,
+ typename GridType::LeafGridView,
+ MatrixType,
+ LocalMapper,
+ LocalMapper> matrixComm(*globalMapper_,
+ grid_->leafGridView(),
+ localMapper,
+ localMapper,
+ 0);
+#endif
+ auto& i = statistics_.finalIteration;
+ double totalAssemblyTime = 0.0;
+ double totalSolverTime = 0.0;
+ double regularization = initialRegularization_;
+ for (i=0; i<maxProximalNewtonSteps_; i++) {
+
+ Dune::Timer totalTimer;
+ if (this->verbosity_ == Solver::FULL and rank==0) {
+ std::cout << "----------------------------------------------------" << std::endl;
+ std::cout << " Proximal Newton Step Number: " << i
+ << ", regularization parameter: " << regularization
+ << ", energy: " << oldEnergy << std::endl;
+ std::cout << "----------------------------------------------------" << std::endl;
}
- // /////////////////////////////////////////////////////
- // Proximal Newton Solver
- // /////////////////////////////////////////////////////
+ CorrectionType corr(x_.size());
+ corr = 0;
- Dune::Timer energyTimer;
- double oldEnergy = assembler_->computeEnergy(x_);
- if (this->verbosity_ == Solver::FULL)
- std::cout << "Energy computation took " << energyTimer.elapsed() << " sec." << std::endl;
+ if (recomputeGradientHessian) {
+ Dune::Timer gradientTimer;
+ assembler_->assembleGradientAndHessian(x_,
+ rhs,
+ *hessianMatrix_,
+ i==0 // assemble occupation pattern only for the first call
+ );
+ std::cout << "Assembly took " << gradientTimer.elapsed() << " sec." << std::endl;
+ rhs *= -1; // The right hand side is the _negative_ gradient
- oldEnergy = grid_->comm().sum(oldEnergy);
-
- bool recomputeGradientHessian = true;
- CorrectionType rhs, rhs_global;
- MatrixType stiffnessMatrix;
-// The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
-#if HAVE_MPI && (!defined(GRID_DIM) or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM) or (defined(WORLD_DIM) && WORLD_DIM < 3))
- VectorCommunicator<GlobalMapper, typename GridType::LeafGridView::CollectiveCommunication, CorrectionType> vectorComm(*globalMapper_,
- grid_->leafGridView().comm(),
- 0);
- LocalMapper localMapper = MapperFactory<Basis>::createLocalMapper(grid_->leafGridView());
- MatrixCommunicator<GlobalMapper,
- typename GridType::LeafGridView,
- typename GridType::LeafGridView,
- MatrixType,
- LocalMapper,
- LocalMapper> matrixComm(*globalMapper_,
- grid_->leafGridView(),
- localMapper,
- localMapper,
- 0);
+ // Transfer vector data
+ // The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
+#if HAVE_MPI && (!defined(GRID_DIM)or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM)or (defined(WORLD_DIM) && WORLD_DIM < 3))
+ rhs_global = vectorComm.reduceAdd(rhs);
+#else
+ rhs_global = rhs;
#endif
- auto& i = statistics_.finalIteration;
- double totalAssemblyTime = 0.0;
- double totalSolverTime = 0.0;
- double regularization = initialRegularization_;
- for (i=0; i<maxProximalNewtonSteps_; i++) {
-
- Dune::Timer totalTimer;
- if (this->verbosity_ == Solver::FULL and rank==0) {
- std::cout << "----------------------------------------------------" << std::endl;
- std::cout << " Proximal Newton Step Number: " << i
- << ", regularization parameter: " << regularization
- << ", energy: " << oldEnergy << std::endl;
- std::cout << "----------------------------------------------------" << std::endl;
- }
-
- CorrectionType corr(x_.size());
- corr = 0;
-
- if (recomputeGradientHessian) {
- Dune::Timer gradientTimer;
- assembler_->assembleGradientAndHessian(x_,
- rhs,
- *hessianMatrix_,
- i==0 // assemble occupation pattern only for the first call
- );
- std::cout << "Assembly took " << gradientTimer.elapsed() << " sec." << std::endl;
-
- rhs *= -1; // The right hand side is the _negative_ gradient
-
- // Transfer vector data
-// The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
-#if HAVE_MPI && (!defined(GRID_DIM) or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM) or (defined(WORLD_DIM) && WORLD_DIM < 3))
- rhs_global = vectorComm.reduceAdd(rhs);
+ CorrectionType gradient = rhs_global;
+ for (size_t j=0; j<gradient.size(); j++)
+ for (size_t k=0; k<gradient[j].size(); k++)
+ if ((innerSolver_->ignore())[j][k]) // global Dirichlet nodes set
+ gradient[j][k] = 0;
+
+ if (this->verbosity_ == Solver::FULL and rank==0)
+ std::cout << "Gradient norm: " << l2Norm_->operator()(gradient) << std::endl;
+
+ if (this->verbosity_ == Solver::FULL and rank==0)
+ std::cout << "Overall assembly took " << gradientTimer.elapsed() << " sec." << std::endl;
+ totalAssemblyTime += gradientTimer.elapsed();
+
+ // The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
+#if HAVE_MPI && (!defined(GRID_DIM)or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM)or (defined(WORLD_DIM) && WORLD_DIM < 3))
+ stiffnessMatrix = matrixComm.reduceAdd(*hessianMatrix_);
#else
- rhs_global = rhs;
+ stiffnessMatrix = *hessianMatrix_;
#endif
- CorrectionType gradient = rhs_global;
- for (size_t j=0; j<gradient.size(); j++)
- for (size_t k=0; k<gradient[j].size(); k++)
- if ((innerSolver_->ignore())[j][k]) // global Dirichlet nodes set
- gradient[j][k] = 0;
+ recomputeGradientHessian = false;
- if (this->verbosity_ == Solver::FULL and rank==0)
- std::cout << "Gradient norm: " << l2Norm_->operator()(gradient) << std::endl;
+ }
- if (this->verbosity_ == Solver::FULL and rank==0)
- std::cout << "Overall assembly took " << gradientTimer.elapsed() << " sec." << std::endl;
- totalAssemblyTime += gradientTimer.elapsed();
+ CorrectionType corr_global(rhs_global.size());
+ corr_global = 0;
+ bool solved = true;
-// The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
-#if HAVE_MPI && (!defined(GRID_DIM) or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM) or (defined(WORLD_DIM) && WORLD_DIM < 3))
- stiffnessMatrix = matrixComm.reduceAdd(*hessianMatrix_);
-#else
- stiffnessMatrix = *hessianMatrix_;
-#endif
- recomputeGradientHessian = false;
+ if (rank==0)
+ {
+ // Add the regularization - Identity Matrix for now
+ for (std::size_t i=0; i<stiffnessMatrix.N(); i++)
+ for(int j=0; j<blocksize; j++)
+ stiffnessMatrix[i][i][j][j] += regularization/scaling_[j];
- }
+ innerSolver_->setProblem(stiffnessMatrix,corr_global,rhs_global);
+ innerSolver_->preprocess();
- CorrectionType corr_global(rhs_global.size());
- corr_global = 0;
- bool solved = true;
-
- if (rank==0)
- {
- // Add the regularization - Identity Matrix for now
- for (std::size_t i=0; i<stiffnessMatrix.N(); i++)
- for(int j=0; j<blocksize; j++)
- stiffnessMatrix[i][i][j][j] += regularization/scaling_[j];
-
- innerSolver_->setProblem(stiffnessMatrix,corr_global,rhs_global);
- innerSolver_->preprocess();
-
- ///////////////////////////////
- // Solve !
- ///////////////////////////////
-
- std::cout << "Solve quadratic problem using cholmod solver..." << std::endl;
-
- Dune::Timer solutionTimer;
- try {
- innerSolver_->solve();
- } catch (Dune::Exception &e) {
- std::cerr << "Error while solving: " << e << std::endl;
- solved = false;
- corr_global = 0;
- }
- std::cout << "Solving the quadratic problem took " << solutionTimer.elapsed() << " seconds." << std::endl;
- totalSolverTime += solutionTimer.elapsed();
- }
+ ///////////////////////////////
+ // Solve !
+ ///////////////////////////////
- // Distribute solution
- if (grid_->comm().size()>1 and rank==0)
- std::cout << "Transfer solution back to root process ..." << std::endl;
+ std::cout << "Solve quadratic problem using cholmod solver..." << std::endl;
-// The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
-#if HAVE_MPI && (!defined(GRID_DIM) or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM) or (defined(WORLD_DIM) && WORLD_DIM < 3))
- solved = grid_->comm().min(solved);
- if (solved) {
- corr = vectorComm.scatter(corr_global);
- } else {
- corr_global = 0;
- corr = 0;
- }
+ Dune::Timer solutionTimer;
+ try {
+ innerSolver_->solve();
+ } catch (Dune::Exception &e) {
+ std::cerr << "Error while solving: " << e << std::endl;
+ solved = false;
+ corr_global = 0;
+ }
+ std::cout << "Solving the quadratic problem took " << solutionTimer.elapsed() << " seconds." << std::endl;
+ totalSolverTime += solutionTimer.elapsed();
+ }
+
+ // Distribute solution
+ if (grid_->comm().size()>1 and rank==0)
+ std::cout << "Transfer solution back to root process ..." << std::endl;
+
+ // The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
+#if HAVE_MPI && (!defined(GRID_DIM)or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM)or (defined(WORLD_DIM) && WORLD_DIM < 3))
+ solved = grid_->comm().min(solved);
+ if (solved) {
+ corr = vectorComm.scatter(corr_global);
+ } else {
+ corr_global = 0;
+ corr = 0;
+ }
#else
- corr = corr_global;
+ corr = corr_global;
#endif
- double corrNorm;
- if (normType_ == ErrorNormType::infinity)
- corrNorm = corr.infinity_norm();
- else if (normType_ == ErrorNormType::H1semi)
- corrNorm = h1SemiNorm_->operator()(corr);
- else
- DUNE_THROW(Dune::Exception, "Unknown norm type for stopping criterion!");
+ double corrNorm;
+ if (normType_ == ErrorNormType::infinity)
+ corrNorm = corr.infinity_norm();
+ else if (normType_ == ErrorNormType::H1semi)
+ corrNorm = h1SemiNorm_->operator()(corr);
+ else
+ DUNE_THROW(Dune::Exception, "Unknown norm type for stopping criterion!");
- // Make norm of corr_global known on all processors
- double corrGlobalNorm = grid_->comm().max(corrNorm);
+ // Make norm of corr_global known on all processors
+ double corrGlobalNorm = grid_->comm().max(corrNorm);
- if (std::isnan(corrGlobalNorm))
- solved = false;
+ if (std::isnan(corrGlobalNorm))
+ solved = false;
- if (instrumented_) {
+ if (instrumented_) {
#if 0
- fprintf(fp, "Proximal newton step: %ld, regularization parameter: %g\n",
- i, regularization);
+ fprintf(fp, "Proximal newton step: %ld, regularization parameter: %g\n",
+ i, regularization);
- // ///////////////////////////////////////////////////////////////
- // Compute and measure progress against the exact solution
- // for each proximal newton step
- // ///////////////////////////////////////////////////////////////
+ // ///////////////////////////////////////////////////////////////
+ // Compute and measure progress against the exact solution
+ // for each proximal newton step
+ // ///////////////////////////////////////////////////////////////
- CorrectionType exactSolution = corr;
+ CorrectionType exactSolution = corr;
- // Start from 0
- double oldError = 0;
- double totalConvRate = 1;
- double convRate = 1;
+ // Start from 0
+ double oldError = 0;
+ double totalConvRate = 1;
+ double convRate = 1;
- // Write statistics of the initial solution
- // Compute the energy norm
- oldError = h1SemiNorm_->operator()(exactSolution);
+ // Write statistics of the initial solution
+ // Compute the energy norm
+ oldError = h1SemiNorm_->operator()(exactSolution);
- for (int j=0; j<innerIterations_; j++) {
+ for (int j=0; j<innerIterations_; j++) {
- // read iteration from file
- CorrectionType intermediateSol(grid_->size(gridDim));
- intermediateSol = 0;
- char iSolFilename[100];
- sprintf(iSolFilename, "tmp/mgHistory/intermediatesolution_%04d", j);
+ // read iteration from file
+ CorrectionType intermediateSol(grid_->size(gridDim));
+ intermediateSol = 0;
+ char iSolFilename[100];
+ sprintf(iSolFilename, "tmp/mgHistory/intermediatesolution_%04d", j);
- FILE* fpInt = fopen(iSolFilename, "rb");
- if (!fpInt)
- DUNE_THROW(Dune::IOError, "Couldn't open intermediate solution");
- for (size_t k=0; k<intermediateSol.size(); k++)
- for (int l=0; l<blocksize; l++)
- fread(&intermediateSol[k][l], sizeof(double), 1, fpInt);
+ FILE* fpInt = fopen(iSolFilename, "rb");
+ if (!fpInt)
+ DUNE_THROW(Dune::IOError, "Couldn't open intermediate solution");
+ for (size_t k=0; k<intermediateSol.size(); k++)
+ for (int l=0; l<blocksize; l++)
+ fread(&intermediateSol[k][l], sizeof(double), 1, fpInt);
- fclose(fpInt);
- //std::cout << "intermediateSol\n" << intermediateSol << std::endl;
+ fclose(fpInt);
+ //std::cout << "intermediateSol\n" << intermediateSol << std::endl;
- // Compute errors
- intermediateSol -= exactSolution;
+ // Compute errors
+ intermediateSol -= exactSolution;
- //std::cout << "error\n" << intermediateSol << std::endl;
+ //std::cout << "error\n" << intermediateSol << std::endl;
- // Compute the H1 norm
- double error = h1SemiNorm_->operator()(intermediateSol);
+ // Compute the H1 norm
+ double error = h1SemiNorm_->operator()(intermediateSol);
- convRate = error / oldError;
- totalConvRate *= convRate;
+ convRate = error / oldError;
+ totalConvRate *= convRate;
- if (error < 1e-12)
- break;
+ if (error < 1e-12)
+ break;
- std::cout << "Iteration: " << j << " ";
- std::cout << "Errors: error " << error << ", convergence rate: " << convRate
- << ", total conv rate " << pow(totalConvRate, 1/((double)j+1)) << std::endl;
+ std::cout << "Iteration: " << j << " ";
+ std::cout << "Errors: error " << error << ", convergence rate: " << convRate
+ << ", total conv rate " << pow(totalConvRate, 1/((double)j+1)) << std::endl;
- fprintf(fp, "%d %g %g %g\n", j+1, error, convRate, pow(totalConvRate, 1/((double)j+1)));
+ fprintf(fp, "%d %g %g %g\n", j+1, error, convRate, pow(totalConvRate, 1/((double)j+1)));
- oldError = error;
+ oldError = error;
- }
+ }
#endif
+ }
+ double energy = 0;
+ double modelDecrease = 0;
+ SolutionType newIterate = x_;
+ if (i == maxProximalNewtonSteps_ - 1)
+ std::cout << i+1 << " proximal newton steps were taken, the maximum was reached." << std::endl << "Total solver time: " << totalSolverTime << " sec., total assembly time: " << totalAssemblyTime << " sec." << std::endl;
+
+ if (solved) {
+ if (this->verbosity_ == NumProc::FULL && rank==0)
+ if (normType_ == ErrorNormType::infinity)
+ std::cout << "infinity norm of the correction: " << corrGlobalNorm << std::endl;
+ else if (normType_ == ErrorNormType::H1semi)
+ std::cout << "H1-semi norm of the correction: " << corrGlobalNorm << std::endl;
+ else
+ DUNE_THROW(Dune::Exception, "Unknown norm type for stopping criterion!");
+
+ if (corrGlobalNorm < this->tolerance_ && corrGlobalNorm < 1/regularization) {
+ if (this->verbosity_ == NumProc::FULL and rank==0)
+ std::cout << "CORRECTION IS SMALL ENOUGH" << std::endl;
+
+ if (this->verbosity_ != NumProc::QUIET and rank==0)
+ std::cout << i+1 << " proximal newton steps were taken" << std::endl << "Total solver time: " << totalSolverTime << " sec., total assembly time: " << totalAssemblyTime << " sec." << std::endl;
+ break;
+ }
+
+ // ////////////////////////////////////////////////////
+ // Check whether proximal newton step can be accepted
+ // ////////////////////////////////////////////////////
+
+ for (size_t j=0; j<newIterate.size(); j++)
+ newIterate[j] = TargetSpace::exp(newIterate[j], corr[j]);
+ try {
+ energy = assembler_->computeEnergy(newIterate);
+ } catch (Dune::Exception &e) {
+ std::cerr << "Error while computing the energy of the new Iterate: " << e << std::endl;
+ std::cerr << "Redoing proximal newton step with higher regularization parameter ..." << std::endl;
+ solved = false;
+ }
+ solved = grid_->comm().min(solved);
+
+ if (!solved) {
+ energy = oldEnergy;
+ newIterate = x_;
+ } else {
+ energy = grid_->comm().sum(energy);
+
+ // compute the model decrease
+ // It is $ m(x) - m(x+s) = -<g,s> - 0.5 <s, Hs>
+ // Note that rhs = -g
+ CorrectionType tmp(corr.size());
+ tmp = 0;
+ hessianMatrix_->umv(corr, tmp);
+ modelDecrease = (rhs*corr) - 0.5 * (corr*tmp);
+ modelDecrease = grid_->comm().sum(modelDecrease);
+
+ double relativeModelDecrease = modelDecrease / std::fabs(energy);
+
+ if (this->verbosity_ == NumProc::FULL and rank==0) {
+ std::cout << "Absolute model decrease: " << modelDecrease
+ << ", functional decrease: " << oldEnergy - energy << std::endl;
+ std::cout << "Relative model decrease: " << relativeModelDecrease
+ << ", functional decrease: " << (oldEnergy - energy)/energy << std::endl;
}
- double energy = 0;
- double modelDecrease = 0;
- SolutionType newIterate = x_;
- if (i == maxProximalNewtonSteps_ - 1)
- std::cout << i+1 << " proximal newton steps were taken, the maximum was reached." << std::endl << "Total solver time: " << totalSolverTime << " sec., total assembly time: " << totalAssemblyTime << " sec." << std::endl;
-
- if (solved) {
- if (this->verbosity_ == NumProc::FULL && rank==0)
- if (normType_ == ErrorNormType::infinity)
- std::cout << "infinity norm of the correction: " << corrGlobalNorm << std::endl;
- else if (normType_ == ErrorNormType::H1semi)
- std::cout << "H1-semi norm of the correction: " << corrGlobalNorm << std::endl;
- else
- DUNE_THROW(Dune::Exception, "Unknown norm type for stopping criterion!");
-
- if (corrGlobalNorm < this->tolerance_ && corrGlobalNorm < 1/regularization) {
- if (this->verbosity_ == NumProc::FULL and rank==0)
- std::cout << "CORRECTION IS SMALL ENOUGH" << std::endl;
-
- if (this->verbosity_ != NumProc::QUIET and rank==0)
- std::cout << i+1 << " proximal newton steps were taken" << std::endl << "Total solver time: " << totalSolverTime << " sec., total assembly time: " << totalAssemblyTime << " sec." << std::endl;
- break;
- }
-
- // ////////////////////////////////////////////////////
- // Check whether proximal newton step can be accepted
- // ////////////////////////////////////////////////////
-
- for (size_t j=0; j<newIterate.size(); j++)
- newIterate[j] = TargetSpace::exp(newIterate[j], corr[j]);
- try {
- energy = assembler_->computeEnergy(newIterate);
- } catch (Dune::Exception &e) {
- std::cerr << "Error while computing the energy of the new Iterate: " << e << std::endl;
- std::cerr << "Redoing proximal newton step with higher regularization parameter ..." << std::endl;
- solved = false;
- }
- solved = grid_->comm().min(solved);
-
- if (!solved) {
- energy = oldEnergy;
- newIterate = x_;
- } else {
- energy = grid_->comm().sum(energy);
-
- // compute the model decrease
- // It is $ m(x) - m(x+s) = -<g,s> - 0.5 <s, Hs>
- // Note that rhs = -g
- CorrectionType tmp(corr.size());
- tmp = 0;
- hessianMatrix_->umv(corr, tmp);
- modelDecrease = (rhs*corr) - 0.5 * (corr*tmp);
- modelDecrease = grid_->comm().sum(modelDecrease);
-
- double relativeModelDecrease = modelDecrease / std::fabs(energy);
-
- if (this->verbosity_ == NumProc::FULL and rank==0) {
- std::cout << "Absolute model decrease: " << modelDecrease
- << ", functional decrease: " << oldEnergy - energy << std::endl;
- std::cout << "Relative model decrease: " << relativeModelDecrease
- << ", functional decrease: " << (oldEnergy - energy)/energy << std::endl;
- }
- assert(modelDecrease >= 0);
-
-
- if (energy >= oldEnergy and rank==0) {
- if (this->verbosity_ == NumProc::FULL)
- std::cout << "Direction is not a descent direction!" << std::endl;
- }
-
- if (energy >= oldEnergy &&
- (std::abs((oldEnergy-energy)/energy) < 1e-9 || relativeModelDecrease < 1e-9)) {
- if (this->verbosity_ == NumProc::FULL and rank==0)
- std::cout << "Suspecting rounding problems" << std::endl;
-
- if (this->verbosity_ != NumProc::QUIET and rank==0)
- std::cout << i+1 << " proximal newton steps were taken." << std::endl;
-
- x_ = newIterate;
- break;
- }
- }
+ assert(modelDecrease >= 0);
+
+
+ if (energy >= oldEnergy and rank==0) {
+ if (this->verbosity_ == NumProc::FULL)
+ std::cout << "Direction is not a descent direction!" << std::endl;
}
- // //////////////////////////////////////////////
- // Check for acceptance of the step
- // //////////////////////////////////////////////
- if (solved && (oldEnergy-energy) / modelDecrease > 0.9) {
- // very successful iteration
+ if (energy >= oldEnergy &&
+ (std::abs((oldEnergy-energy)/energy) < 1e-9 || relativeModelDecrease < 1e-9)) {
+ if (this->verbosity_ == NumProc::FULL and rank==0)
+ std::cout << "Suspecting rounding problems" << std::endl;
- x_ = newIterate;
- regularization *= 0.5;
+ if (this->verbosity_ != NumProc::QUIET and rank==0)
+ std::cout << i+1 << " proximal newton steps were taken." << std::endl;
- // current energy becomes 'oldEnergy' for the next iteration
- oldEnergy = energy;
+ x_ = newIterate;
+ break;
+ }
+ }
+ }
- recomputeGradientHessian = true;
+ // //////////////////////////////////////////////
+ // Check for acceptance of the step
+ // //////////////////////////////////////////////
+ if (solved && (oldEnergy-energy) / modelDecrease > 0.9) {
+ // very successful iteration
- } else if (solved && ((oldEnergy-energy) / modelDecrease > 0.01
- || std::abs(oldEnergy-energy) < 1e-12)) {
- // successful iteration
- x_ = newIterate;
+ x_ = newIterate;
+ regularization *= 0.5;
- // current energy becomes 'oldEnergy' for the next iteration
- oldEnergy = energy;
+ // current energy becomes 'oldEnergy' for the next iteration
+ oldEnergy = energy;
- recomputeGradientHessian = true;
+ recomputeGradientHessian = true;
- } else {
+ } else if (solved && ((oldEnergy-energy) / modelDecrease > 0.01
+ || std::abs(oldEnergy-energy) < 1e-12)) {
+ // successful iteration
+ x_ = newIterate;
- // unsuccessful iteration
+ // current energy becomes 'oldEnergy' for the next iteration
+ oldEnergy = energy;
- // Increase the regularization parameter
- regularization *= 2;
+ recomputeGradientHessian = true;
- if (this->verbosity_ == NumProc::FULL and rank==0)
- std::cout << "Unsuccessful iteration!" << std::endl;
- }
+ } else {
- // /////////////////////////////////////////////////////////////////////
- // Write the iterate to disk for later convergence rate measurement
- // /////////////////////////////////////////////////////////////////////
+ // unsuccessful iteration
- if (instrumented_) {
+ // Increase the regularization parameter
+ regularization *= 2;
- char iFilename[100];
- sprintf(iFilename, "tmp/intermediateSolution_%04ld", i);
+ if (this->verbosity_ == NumProc::FULL and rank==0)
+ std::cout << "Unsuccessful iteration!" << std::endl;
+ }
+
+ // /////////////////////////////////////////////////////////////////////
+ // Write the iterate to disk for later convergence rate measurement
+ // /////////////////////////////////////////////////////////////////////
- FILE* fpIterate = fopen(iFilename, "wb");
- if (!fpIterate)
- DUNE_THROW(SolverError, "Couldn't open file " << iFilename << " for writing");
+ if (instrumented_) {
- for (size_t j=0; j<x_.size(); j++)
- fwrite(&x_[j], sizeof(TargetSpace), 1, fpIterate);
+ char iFilename[100];
+ sprintf(iFilename, "tmp/intermediateSolution_%04ld", i);
- fclose(fpIterate);
+ FILE* fpIterate = fopen(iFilename, "wb");
+ if (!fpIterate)
+ DUNE_THROW(SolverError, "Couldn't open file " << iFilename << " for writing");
- }
+ for (size_t j=0; j<x_.size(); j++)
+ fwrite(&x_[j], sizeof(TargetSpace), 1, fpIterate);
+
+ fclose(fpIterate);
- if (rank==0)
- std::cout << "iteration took " << totalTimer.elapsed() << " sec." << std::endl;
}
- // //////////////////////////////////////////////
- // Close logfile
- // //////////////////////////////////////////////
- if (instrumented_)
- fclose(fp);
+ if (rank==0)
+ std::cout << "iteration took " << totalTimer.elapsed() << " sec." << std::endl;
+ }
+
+ // //////////////////////////////////////////////
+ // Close logfile
+ // //////////////////////////////////////////////
+ if (instrumented_)
+ fclose(fp);
- statistics_.finalEnergy = oldEnergy;
+ statistics_.finalEnergy = oldEnergy;
}
diff --git a/dune/gfe/riemannianpnsolver.hh b/dune/gfe/riemannianpnsolver.hh
index 67aa29a0..26fd4f50 100644
--- a/dune/gfe/riemannianpnsolver.hh
+++ b/dune/gfe/riemannianpnsolver.hh
@@ -28,144 +28,144 @@
#include <dune/gfe/parallel/p2mapper.hh>
/** \brief Riemannian proximal-newton solver for geodesic finite-element problems */
-template <class Basis, class TargetSpace, class Assembler = GeodesicFEAssembler<Basis,TargetSpace>>
+template <class Basis, class TargetSpace, class Assembler = GeodesicFEAssembler<Basis,TargetSpace> >
class RiemannianProximalNewtonSolver
- : public IterativeSolver<std::vector<TargetSpace>,
- Dune::BitSetVector<TargetSpace::TangentVector::dimension> >
+ : public IterativeSolver<std::vector<TargetSpace>,
+ Dune::BitSetVector<TargetSpace::TangentVector::dimension> >
{
- typedef typename Basis::GridView::Grid GridType;
+ typedef typename Basis::GridView::Grid GridType;
- const static int blocksize = TargetSpace::TangentVector::dimension;
+ const static int blocksize = TargetSpace::TangentVector::dimension;
- const static int gridDim = GridType::dimension;
+ const static int gridDim = GridType::dimension;
- // Centralize the field type here
- typedef double field_type;
+ // Centralize the field type here
+ typedef double field_type;
- // Some types that I need
- typedef Dune::BCRSMatrix<Dune::FieldMatrix<field_type, blocksize, blocksize> > MatrixType;
- typedef Dune::BlockVector<Dune::FieldVector<field_type, blocksize> > CorrectionType;
- typedef std::vector<TargetSpace> SolutionType;
+ // Some types that I need
+ typedef Dune::BCRSMatrix<Dune::FieldMatrix<field_type, blocksize, blocksize> > MatrixType;
+ typedef Dune::BlockVector<Dune::FieldVector<field_type, blocksize> > CorrectionType;
+ typedef std::vector<TargetSpace> SolutionType;
#if HAVE_MPI
- typedef typename MapperFactory<Basis>::GlobalMapper GlobalMapper;
- typedef typename MapperFactory<Basis>::LocalMapper LocalMapper;
+ typedef typename MapperFactory<Basis>::GlobalMapper GlobalMapper;
+ typedef typename MapperFactory<Basis>::LocalMapper LocalMapper;
#endif
- /** \brief Records information about the last run of the RiemannianProximalNewtonSolver
- *
- * This is used primarily for unit testing.
- */
- struct Statistics
- {
- std::size_t finalIteration;
+ /** \brief Records information about the last run of the RiemannianProximalNewtonSolver
+ *
+ * This is used primarily for unit testing.
+ */
+ struct Statistics
+ {
+ std::size_t finalIteration;
- field_type finalEnergy;
- };
+ field_type finalEnergy;
+ };
public:
- RiemannianProximalNewtonSolver()
- : IterativeSolver<std::vector<TargetSpace>, Dune::BitSetVector<blocksize> >(0,100,NumProc::FULL),
- hessianMatrix_(nullptr), h1SemiNorm_(NULL)
- {
- std::fill(scaling_.begin(), scaling_.end(), 1.0);
- }
-
- /** \brief Set up the solver using a choldmod or umfpack solver as the inner solver */
- void setup(const GridType& grid,
- const Assembler* assembler,
- const SolutionType& x,
- const Dune::BitSetVector<blocksize>& dirichletNodes,
- double tolerance,
- int maxProximalNewtonSteps,
- double initialRegularization,
- bool instrumented);
-
- /** \brief Set up the solver using a monotone multigrid method as the inner solver */
- void setup(const GridType& grid,
- const Assembler* assembler,
- const SolutionType& x,
- const Dune::BitSetVector<blocksize>& dirichletNodes,
- const Dune::ParameterTree& parameterSet);
-
- void setScaling(const Dune::FieldVector<double,blocksize>& scaling)
- {
- scaling_ = scaling;
- }
-
- void setIgnoreNodes(const Dune::BitSetVector<blocksize>& ignoreNodes)
- {
- ignoreNodes_ = &ignoreNodes;
- innerSolver_->ignoreNodes_ = ignoreNodes_;
- }
-
- void solve();
-
- [[deprecated]]
- void setInitialSolution(const SolutionType& x) {
- x_ = x;
- }
-
- void setInitialIterate(const SolutionType& x) {
- x_ = x;
- }
-
- SolutionType getSol() const {return x_;}
-
- const Statistics& getStatistics() const {return statistics_;}
+ RiemannianProximalNewtonSolver()
+ : IterativeSolver<std::vector<TargetSpace>, Dune::BitSetVector<blocksize> >(0,100,NumProc::FULL),
+ hessianMatrix_(nullptr), h1SemiNorm_(NULL)
+ {
+ std::fill(scaling_.begin(), scaling_.end(), 1.0);
+ }
+
+ /** \brief Set up the solver using a choldmod or umfpack solver as the inner solver */
+ void setup(const GridType& grid,
+ const Assembler* assembler,
+ const SolutionType& x,
+ const Dune::BitSetVector<blocksize>& dirichletNodes,
+ double tolerance,
+ int maxProximalNewtonSteps,
+ double initialRegularization,
+ bool instrumented);
+
+ /** \brief Set up the solver using a monotone multigrid method as the inner solver */
+ void setup(const GridType& grid,
+ const Assembler* assembler,
+ const SolutionType& x,
+ const Dune::BitSetVector<blocksize>& dirichletNodes,
+ const Dune::ParameterTree& parameterSet);
+
+ void setScaling(const Dune::FieldVector<double,blocksize>& scaling)
+ {
+ scaling_ = scaling;
+ }
+
+ void setIgnoreNodes(const Dune::BitSetVector<blocksize>& ignoreNodes)
+ {
+ ignoreNodes_ = &ignoreNodes;
+ innerSolver_->ignoreNodes_ = ignoreNodes_;
+ }
+
+ void solve();
+
+ [[deprecated]]
+ void setInitialSolution(const SolutionType& x) {
+ x_ = x;
+ }
+
+ void setInitialIterate(const SolutionType& x) {
+ x_ = x;
+ }
+
+ SolutionType getSol() const {return x_;}
+
+ const Statistics& getStatistics() const {return statistics_;}
protected:
#if HAVE_MPI
- std::unique_ptr<GlobalMapper> globalMapper_;
+ std::unique_ptr<GlobalMapper> globalMapper_;
#endif
- /** \brief The grid */
- const GridType* grid_;
+ /** \brief The grid */
+ const GridType* grid_;
- /** \brief The solution vector */
- SolutionType x_;
+ /** \brief The solution vector */
+ SolutionType x_;
- /** \brief The initial regularization parameter for the proximal newton step */
- double initialRegularization_;
- double tolerance_;
+ /** \brief The initial regularization parameter for the proximal newton step */
+ double initialRegularization_;
+ double tolerance_;
- /** \brief Regularization scaling */
- Dune::FieldVector<double,blocksize> scaling_;
+ /** \brief Regularization scaling */
+ Dune::FieldVector<double,blocksize> scaling_;
- /** \brief Maximum number of proximal-newton steps */
- std::size_t maxProximalNewtonSteps_;
+ /** \brief Maximum number of proximal-newton steps */
+ std::size_t maxProximalNewtonSteps_;
- /** \brief Hessian matrix */
- std::unique_ptr<MatrixType> hessianMatrix_;
+ /** \brief Hessian matrix */
+ std::unique_ptr<MatrixType> hessianMatrix_;
- /** \brief The assembler for the material law */
- const Assembler* assembler_;
+ /** \brief The assembler for the material law */
+ const Assembler* assembler_;
- /** \brief The solver for the quadratic inner problems */
+ /** \brief The solver for the quadratic inner problems */
#if DUNE_VERSION_GTE(DUNE_SOLVERS, 2, 8)
- std::shared_ptr<typename Dune::Solvers::CholmodSolver<MatrixType,CorrectionType>> innerSolver_;
+ std::shared_ptr<typename Dune::Solvers::CholmodSolver<MatrixType,CorrectionType> > innerSolver_;
#else
- std::shared_ptr<typename Dune::Solvers::UMFPackSolver<MatrixType,CorrectionType>> innerSolver_;
+ std::shared_ptr<typename Dune::Solvers::UMFPackSolver<MatrixType,CorrectionType> > innerSolver_;
#endif
- /** \brief The Dirichlet nodes */
- const Dune::BitSetVector<blocksize>* ignoreNodes_;
+ /** \brief The Dirichlet nodes */
+ const Dune::BitSetVector<blocksize>* ignoreNodes_;
- /** \brief The norm used to measure convergence for statistics*/
- std::shared_ptr<H1SemiNorm<CorrectionType> > h1SemiNorm_;
+ /** \brief The norm used to measure convergence for statistics*/
+ std::shared_ptr<H1SemiNorm<CorrectionType> > h1SemiNorm_;
- /** \brief An L2-norm, really. The H1SemiNorm class is badly named */
- std::shared_ptr<H1SemiNorm<CorrectionType> > l2Norm_;
+ /** \brief An L2-norm, really. The H1SemiNorm class is badly named */
+ std::shared_ptr<H1SemiNorm<CorrectionType> > l2Norm_;
- /** \brief If set to true we log convergence speed and other stuff */
- bool instrumented_;
+ /** \brief If set to true we log convergence speed and other stuff */
+ bool instrumented_;
- /** \brief Norm type used for stopping criterion (default is infinity norm) */
- enum class ErrorNormType {infinity, H1semi} normType_ = ErrorNormType::infinity;
+ /** \brief Norm type used for stopping criterion (default is infinity norm) */
+ enum class ErrorNormType {infinity, H1semi} normType_ = ErrorNormType::infinity;
- /** \brief Store information about solver runs for unit testing */
- Statistics statistics_;
+ /** \brief Store information about solver runs for unit testing */
+ Statistics statistics_;
};
diff --git a/dune/gfe/riemanniantrsolver.cc b/dune/gfe/riemanniantrsolver.cc
index 5285d01c..7fc00955 100644
--- a/dune/gfe/riemanniantrsolver.cc
+++ b/dune/gfe/riemanniantrsolver.cc
@@ -23,304 +23,304 @@
#include <dune/solvers/norms/h1seminorm.hh>
// The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
-#if HAVE_MPI && (!defined(GRID_DIM) or (defined(GRID_DIM) && GRID_DIM < 3))
+#if HAVE_MPI && (!defined(GRID_DIM)or (defined(GRID_DIM) && GRID_DIM < 3))
#include <dune/gfe/parallel/matrixcommunicator.hh>
#include <dune/gfe/parallel/vectorcommunicator.hh>
#endif
template <class Basis, class TargetSpace, class Assembler>
void RiemannianTrustRegionSolver<Basis, TargetSpace, Assembler>::
- setup(const GridType& grid,
- const Assembler* assembler,
- const SolutionType& x,
- const Dune::BitSetVector<blocksize>& dirichletNodes,
- const Dune::ParameterTree& parameterSet)
+setup(const GridType& grid,
+ const Assembler* assembler,
+ const SolutionType& x,
+ const Dune::BitSetVector<blocksize>& dirichletNodes,
+ const Dune::ParameterTree& parameterSet)
{
- if(parameterSet.get("norm", "infinity") == "infinity")
- normType_ = ErrorNormType::infinity;
- else if(parameterSet.get("norm", "infinity") == "H1-Semi")
- normType_ = ErrorNormType::H1semi;
- else
- DUNE_THROW(Dune::Exception, "Unknown norm type for stopping criterion!");
-
- setup(grid,
- assembler,
- x,
- dirichletNodes,
- parameterSet.get<double>("tolerance"),
- parameterSet.get<int>("maxTrustRegionSteps"),
- parameterSet.get<double>("initialTrustRegionRadius"),
- parameterSet.get<int>("numIt"),
- parameterSet.get<double>("mgTolerance"),
- parameterSet.get<int>("mu"), parameterSet.get<int>("nu1"), parameterSet.get<int>("nu2"),
- parameterSet.get<int>("baseIt"),
- parameterSet.get<double>("baseTolerance"),
- parameterSet.get<bool>("instrumented", 0));
+ if(parameterSet.get("norm", "infinity") == "infinity")
+ normType_ = ErrorNormType::infinity;
+ else if(parameterSet.get("norm", "infinity") == "H1-Semi")
+ normType_ = ErrorNormType::H1semi;
+ else
+ DUNE_THROW(Dune::Exception, "Unknown norm type for stopping criterion!");
+
+ setup(grid,
+ assembler,
+ x,
+ dirichletNodes,
+ parameterSet.get<double>("tolerance"),
+ parameterSet.get<int>("maxTrustRegionSteps"),
+ parameterSet.get<double>("initialTrustRegionRadius"),
+ parameterSet.get<int>("numIt"),
+ parameterSet.get<double>("mgTolerance"),
+ parameterSet.get<int>("mu"), parameterSet.get<int>("nu1"), parameterSet.get<int>("nu2"),
+ parameterSet.get<int>("baseIt"),
+ parameterSet.get<double>("baseTolerance"),
+ parameterSet.get<bool>("instrumented", 0));
}
template <class Basis, class TargetSpace, class Assembler>
void RiemannianTrustRegionSolver<Basis,TargetSpace,Assembler>::
setup(const GridType& grid,
const Assembler* assembler,
- const SolutionType& x,
- const Dune::BitSetVector<blocksize>& dirichletNodes,
- double tolerance,
- int maxTrustRegionSteps,
- double initialTrustRegionRadius,
- int multigridIterations,
- double mgTolerance,
- int mu,
- int nu1,
- int nu2,
- int baseIterations,
- double baseTolerance,
- bool instrumented)
+ const SolutionType& x,
+ const Dune::BitSetVector<blocksize>& dirichletNodes,
+ double tolerance,
+ int maxTrustRegionSteps,
+ double initialTrustRegionRadius,
+ int multigridIterations,
+ double mgTolerance,
+ int mu,
+ int nu1,
+ int nu2,
+ int baseIterations,
+ double baseTolerance,
+ bool instrumented)
{
- int rank = grid.comm().rank();
-
- grid_ = &grid;
- assembler_ = assembler;
- x_ = x;
- this->tolerance_ = tolerance;
- maxTrustRegionSteps_ = maxTrustRegionSteps;
- initialTrustRegionRadius_ = initialTrustRegionRadius;
- innerIterations_ = multigridIterations;
- innerTolerance_ = mgTolerance;
- instrumented_ = instrumented;
- ignoreNodes_ = &dirichletNodes;
-
- int numLevels = grid_->maxLevel()+1;
-
-// The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
-#if HAVE_MPI && (!defined(GRID_DIM) or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM) or (defined(WORLD_DIM) && WORLD_DIM < 3))
- //////////////////////////////////////////////////////////////////
- // Create global numbering for matrix and vector transfer
- //////////////////////////////////////////////////////////////////
-
- globalMapper_ = std::make_unique<GlobalMapper>(grid_->leafGridView());
+ int rank = grid.comm().rank();
+
+ grid_ = &grid;
+ assembler_ = assembler;
+ x_ = x;
+ this->tolerance_ = tolerance;
+ maxTrustRegionSteps_ = maxTrustRegionSteps;
+ initialTrustRegionRadius_ = initialTrustRegionRadius;
+ innerIterations_ = multigridIterations;
+ innerTolerance_ = mgTolerance;
+ instrumented_ = instrumented;
+ ignoreNodes_ = &dirichletNodes;
+
+ int numLevels = grid_->maxLevel()+1;
+
+ // The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
+#if HAVE_MPI && (!defined(GRID_DIM)or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM)or (defined(WORLD_DIM) && WORLD_DIM < 3))
+ //////////////////////////////////////////////////////////////////
+ // Create global numbering for matrix and vector transfer
+ //////////////////////////////////////////////////////////////////
+
+ globalMapper_ = std::make_unique<GlobalMapper>(grid_->leafGridView());
#endif
- // ////////////////////////////////
- // Create a multigrid solver
- // ////////////////////////////////
+ // ////////////////////////////////
+ // Create a multigrid solver
+ // ////////////////////////////////
#ifdef HAVE_IPOPT
- // First create an IPOpt base solver
- QuadraticIPOptSolver<MatrixType,CorrectionType> baseSolver;
- baseSolver.setSolverParameter(baseTolerance, 100, NumProc::QUIET);
+ // First create an IPOpt base solver
+ QuadraticIPOptSolver<MatrixType,CorrectionType> baseSolver;
+ baseSolver.setSolverParameter(baseTolerance, 100, NumProc::QUIET);
#else
- // First create a Gauss-seidel base solver
- auto baseSolverStep = std::make_shared<TrustRegionGSStep<MatrixType, CorrectionType>>();
+ // First create a Gauss-seidel base solver
+ auto baseSolverStep = std::make_shared<TrustRegionGSStep<MatrixType, CorrectionType> >();
- // Hack: the two-norm may not scale all that well, but it is fast!
- auto baseNorm = std::make_shared<TwoNorm<CorrectionType>>();
+ // Hack: the two-norm may not scale all that well, but it is fast!
+ auto baseNorm = std::make_shared<TwoNorm<CorrectionType> >();
- auto baseSolver = std::make_shared<::LoopSolver<CorrectionType>>(baseSolverStep,
- baseIterations,
- baseTolerance,
- baseNorm,
- Solver::QUIET);
+ auto baseSolver = std::make_shared<::LoopSolver<CorrectionType> >(baseSolverStep,
+ baseIterations,
+ baseTolerance,
+ baseNorm,
+ Solver::QUIET);
#endif
-// The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
-#if HAVE_MPI && (!defined(GRID_DIM) or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM) or (defined(WORLD_DIM) && WORLD_DIM < 3))
- // Transfer all Dirichlet data to the master processor
- VectorCommunicator<GlobalMapper, typename GridType::LeafGridView::CollectiveCommunication, Dune::BitSetVector<blocksize> > vectorComm(*globalMapper_,
- grid_->leafGridView().comm(),
- 0);
- auto globalDirichletNodes = new Dune::BitSetVector<blocksize>(vectorComm.reduceCopy(dirichletNodes));
+ // The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
+#if HAVE_MPI && (!defined(GRID_DIM)or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM)or (defined(WORLD_DIM) && WORLD_DIM < 3))
+ // Transfer all Dirichlet data to the master processor
+ VectorCommunicator<GlobalMapper, typename GridType::LeafGridView::CollectiveCommunication, Dune::BitSetVector<blocksize> > vectorComm(*globalMapper_,
+ grid_->leafGridView().comm(),
+ 0);
+ auto globalDirichletNodes = new Dune::BitSetVector<blocksize>(vectorComm.reduceCopy(dirichletNodes));
#else
- auto globalDirichletNodes = new Dune::BitSetVector<blocksize>(dirichletNodes);
+ auto globalDirichletNodes = new Dune::BitSetVector<blocksize>(dirichletNodes);
#endif
- // Make smoother (will be used for pre- and postsmoothing
- auto smoother = std::make_shared<TrustRegionGSStep<MatrixType, CorrectionType> >();
+ // Make smoother (will be used for pre- and postsmoothing
+ auto smoother = std::make_shared<TrustRegionGSStep<MatrixType, CorrectionType> >();
- auto mmgStep = std::make_shared<MonotoneMGStep<MatrixType, CorrectionType> >();
+ auto mmgStep = std::make_shared<MonotoneMGStep<MatrixType, CorrectionType> >();
- mmgStep->setMGType(mu, nu1, nu2);
- mmgStep->setIgnore(*globalDirichletNodes);
- mmgStep->setBaseSolver(std::move(baseSolver));
- mmgStep->setSmoother(smoother);
- mmgStep->setObstacleRestrictor(MandelObstacleRestrictor<CorrectionType>{});
- mmgStep->setVerbosity(Solver::QUIET);
+ mmgStep->setMGType(mu, nu1, nu2);
+ mmgStep->setIgnore(*globalDirichletNodes);
+ mmgStep->setBaseSolver(std::move(baseSolver));
+ mmgStep->setSmoother(smoother);
+ mmgStep->setObstacleRestrictor(MandelObstacleRestrictor<CorrectionType>{});
+ mmgStep->setVerbosity(Solver::QUIET);
- // //////////////////////////////////////////////////////////////////////////////////////
- // Assemble a Laplace matrix to create a norm that's equivalent to the H1-norm
- // //////////////////////////////////////////////////////////////////////////////////////
+ // //////////////////////////////////////////////////////////////////////////////////////
+ // Assemble a Laplace matrix to create a norm that's equivalent to the H1-norm
+ // //////////////////////////////////////////////////////////////////////////////////////
- const Basis& basis = assembler_->getBasis();
- Dune::Fufem::DuneFunctionsOperatorAssembler<Basis,Basis> operatorAssembler(basis, basis);
+ const Basis& basis = assembler_->getBasis();
+ Dune::Fufem::DuneFunctionsOperatorAssembler<Basis,Basis> operatorAssembler(basis, basis);
- Dune::Fufem::LaplaceAssembler laplaceStiffness;
- typedef Dune::BCRSMatrix<Dune::FieldMatrix<double,1,1> > ScalarMatrixType;
- ScalarMatrixType localA;
+ Dune::Fufem::LaplaceAssembler laplaceStiffness;
+ typedef Dune::BCRSMatrix<Dune::FieldMatrix<double,1,1> > ScalarMatrixType;
+ ScalarMatrixType localA;
- operatorAssembler.assembleBulk(Dune::Fufem::istlMatrixBackend(localA), laplaceStiffness);
+ operatorAssembler.assembleBulk(Dune::Fufem::istlMatrixBackend(localA), laplaceStiffness);
-// The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
-#if HAVE_MPI && (!defined(GRID_DIM) or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM) or (defined(WORLD_DIM) && WORLD_DIM < 3))
- LocalMapper localMapper = MapperFactory<Basis>::createLocalMapper(grid_->leafGridView());
+ // The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
+#if HAVE_MPI && (!defined(GRID_DIM)or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM)or (defined(WORLD_DIM) && WORLD_DIM < 3))
+ LocalMapper localMapper = MapperFactory<Basis>::createLocalMapper(grid_->leafGridView());
- MatrixCommunicator<GlobalMapper,
- typename GridType::LeafGridView,
- typename GridType::LeafGridView,
- ScalarMatrixType,
- LocalMapper,
- LocalMapper> matrixComm(*globalMapper_, grid_->leafGridView(), localMapper, localMapper, 0);
+ MatrixCommunicator<GlobalMapper,
+ typename GridType::LeafGridView,
+ typename GridType::LeafGridView,
+ ScalarMatrixType,
+ LocalMapper,
+ LocalMapper> matrixComm(*globalMapper_, grid_->leafGridView(), localMapper, localMapper, 0);
- auto A = std::make_shared<ScalarMatrixType>(matrixComm.reduceAdd(localA));
+ auto A = std::make_shared<ScalarMatrixType>(matrixComm.reduceAdd(localA));
#else
- auto A = std::make_shared<ScalarMatrixType>(localA);
+ auto A = std::make_shared<ScalarMatrixType>(localA);
#endif
- h1SemiNorm_ = std::make_shared<H1SemiNorm<CorrectionType> >(A);
+ h1SemiNorm_ = std::make_shared<H1SemiNorm<CorrectionType> >(A);
- innerSolver_ = std::make_shared<::LoopSolver<CorrectionType> >(mmgStep,
- innerIterations_,
- innerTolerance_,
- h1SemiNorm_,
- Solver::QUIET);
+ innerSolver_ = std::make_shared<::LoopSolver<CorrectionType> >(mmgStep,
+ innerIterations_,
+ innerTolerance_,
+ h1SemiNorm_,
+ Solver::QUIET);
- // //////////////////////////////////////////////////////////////////////////////////////
- // Assemble a mass matrix to create a norm that's equivalent to the L2-norm
- // This will be used to monitor the gradient
- // //////////////////////////////////////////////////////////////////////////////////////
+ // //////////////////////////////////////////////////////////////////////////////////////
+ // Assemble a mass matrix to create a norm that's equivalent to the L2-norm
+ // This will be used to monitor the gradient
+ // //////////////////////////////////////////////////////////////////////////////////////
- Dune::Fufem::MassAssembler massStiffness;
- ScalarMatrixType localMassMatrix;
+ Dune::Fufem::MassAssembler massStiffness;
+ ScalarMatrixType localMassMatrix;
- operatorAssembler.assembleBulk(Dune::Fufem::istlMatrixBackend(localMassMatrix), massStiffness);
+ operatorAssembler.assembleBulk(Dune::Fufem::istlMatrixBackend(localMassMatrix), massStiffness);
-// The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
-#if HAVE_MPI && (!defined(GRID_DIM) or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM) or (defined(WORLD_DIM) && WORLD_DIM < 3))
- auto massMatrix = std::make_shared<ScalarMatrixType>(matrixComm.reduceAdd(localMassMatrix));
+ // The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
+#if HAVE_MPI && (!defined(GRID_DIM)or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM)or (defined(WORLD_DIM) && WORLD_DIM < 3))
+ auto massMatrix = std::make_shared<ScalarMatrixType>(matrixComm.reduceAdd(localMassMatrix));
#else
- auto massMatrix = std::make_shared<ScalarMatrixType>(localMassMatrix);
+ auto massMatrix = std::make_shared<ScalarMatrixType>(localMassMatrix);
#endif
- l2Norm_ = std::make_shared<H1SemiNorm<CorrectionType> >(massMatrix);
-
- // Write all intermediate solutions, if requested
- if (instrumented_
- && dynamic_cast<IterativeSolver<CorrectionType>*>(innerSolver_.get()))
- dynamic_cast<IterativeSolver<CorrectionType>*>(innerSolver_.get())->historyBuffer_ = "tmp/mgHistory";
-
- // ////////////////////////////////////////////////////////////
- // Create Hessian matrix and its occupation structure
- // ////////////////////////////////////////////////////////////
-
- hessianMatrix_ = std::make_unique<MatrixType>();
- Dune::MatrixIndexSet indices(grid_->size(1), grid_->size(1));
- assembler_->getNeighborsPerVertex(indices);
- indices.exportIdx(*hessianMatrix_);
-
- // ////////////////////////////////////
- // Create the transfer operators
- // ////////////////////////////////////
-
- ////////////////////////////////////////////////////////////////////////
- // The P1 space (actually P1/Q1, depending on the grid) is special:
- // If we work in such a space, then the multigrid hierarchy of spaces
- // is constructed in the usual way. For all other space, there is
- // an additional restriction operator on the top of the hierarchy, which
- // restricts the FE space to the P1/Q1 space on the same grid.
- // On the lower grid levels a hierarchy of P1/Q1 spaces is used again.
- ////////////////////////////////////////////////////////////////////////
-
- bool isP1Basis = std::is_same<Basis,Dune::Functions::LagrangeBasis<typename Basis::GridView,1> >::value;
-
- if (isP1Basis)
- mmgStep->mgTransfer_.resize(numLevels-1);
- else
- mmgStep->mgTransfer_.resize(numLevels);
-
- // Here we set up the restriction of the leaf grid space into the leaf grid P1/Q1 space
- if (not isP1Basis)
- {
- typedef typename TruncatedCompressedMGTransfer<CorrectionType>::TransferOperatorType TransferOperatorType;
- Dune::Functions::LagrangeBasis<typename GridType::LeafGridView,1> p1Basis(grid_->leafGridView());
-
- TransferOperatorType pkToP1TransferMatrix;
- assembleGlobalBasisTransferMatrix(pkToP1TransferMatrix,p1Basis,basis);
+ l2Norm_ = std::make_shared<H1SemiNorm<CorrectionType> >(massMatrix);
+
+ // Write all intermediate solutions, if requested
+ if (instrumented_
+ && dynamic_cast<IterativeSolver<CorrectionType>*>(innerSolver_.get()))
+ dynamic_cast<IterativeSolver<CorrectionType>*>(innerSolver_.get())->historyBuffer_ = "tmp/mgHistory";
+
+ // ////////////////////////////////////////////////////////////
+ // Create Hessian matrix and its occupation structure
+ // ////////////////////////////////////////////////////////////
+
+ hessianMatrix_ = std::make_unique<MatrixType>();
+ Dune::MatrixIndexSet indices(grid_->size(1), grid_->size(1));
+ assembler_->getNeighborsPerVertex(indices);
+ indices.exportIdx(*hessianMatrix_);
+
+ // ////////////////////////////////////
+ // Create the transfer operators
+ // ////////////////////////////////////
+
+ ////////////////////////////////////////////////////////////////////////
+ // The P1 space (actually P1/Q1, depending on the grid) is special:
+ // If we work in such a space, then the multigrid hierarchy of spaces
+ // is constructed in the usual way. For all other space, there is
+ // an additional restriction operator on the top of the hierarchy, which
+ // restricts the FE space to the P1/Q1 space on the same grid.
+ // On the lower grid levels a hierarchy of P1/Q1 spaces is used again.
+ ////////////////////////////////////////////////////////////////////////
+
+ bool isP1Basis = std::is_same<Basis,Dune::Functions::LagrangeBasis<typename Basis::GridView,1> >::value;
+
+ if (isP1Basis)
+ mmgStep->mgTransfer_.resize(numLevels-1);
+ else
+ mmgStep->mgTransfer_.resize(numLevels);
+
+ // Here we set up the restriction of the leaf grid space into the leaf grid P1/Q1 space
+ if (not isP1Basis)
+ {
+ typedef typename TruncatedCompressedMGTransfer<CorrectionType>::TransferOperatorType TransferOperatorType;
+ Dune::Functions::LagrangeBasis<typename GridType::LeafGridView,1> p1Basis(grid_->leafGridView());
+
+ TransferOperatorType pkToP1TransferMatrix;
+ assembleGlobalBasisTransferMatrix(pkToP1TransferMatrix,p1Basis,basis);
+
+ // The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
+#if HAVE_MPI && (!defined(GRID_DIM)or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM)or (defined(WORLD_DIM) && WORLD_DIM < 3))
+ // If we are on more than 1 processors, join all local transfer matrices on rank 0,
+ // and construct a single global transfer operator there.
+ typedef Dune::GlobalP1Mapper<Dune::Functions::LagrangeBasis<typename Basis::GridView,1> > GlobalLeafP1Mapper;
+ GlobalLeafP1Mapper p1Index(grid_->leafGridView());
+
+ typedef Dune::MultipleCodimMultipleGeomTypeMapper<typename GridType::LeafGridView> LeafP1LocalMapper;
+ LeafP1LocalMapper leafP1LocalMapper(grid_->leafGridView(), Dune::mcmgVertexLayout());
-// The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
-#if HAVE_MPI && (!defined(GRID_DIM) or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM) or (defined(WORLD_DIM) && WORLD_DIM < 3))
- // If we are on more than 1 processors, join all local transfer matrices on rank 0,
- // and construct a single global transfer operator there.
- typedef Dune::GlobalP1Mapper<Dune::Functions::LagrangeBasis<typename Basis::GridView,1>> GlobalLeafP1Mapper;
- GlobalLeafP1Mapper p1Index(grid_->leafGridView());
-
- typedef Dune::MultipleCodimMultipleGeomTypeMapper<typename GridType::LeafGridView> LeafP1LocalMapper;
- LeafP1LocalMapper leafP1LocalMapper(grid_->leafGridView(), Dune::mcmgVertexLayout());
-
- MatrixCommunicator<GlobalMapper,
- typename GridType::LeafGridView,
- typename GridType::LeafGridView,
- TransferOperatorType,
- LocalMapper,
- LeafP1LocalMapper,
- GlobalLeafP1Mapper> matrixComm(*globalMapper_, p1Index, grid_->leafGridView(), grid_->leafGridView(), localMapper, leafP1LocalMapper, 0);
-
- mmgStep->mgTransfer_.back() = std::make_shared<TruncatedCompressedMGTransfer<CorrectionType> >();
- std::shared_ptr<TransferOperatorType> topTransferOperator = std::make_shared<TransferOperatorType>(matrixComm.reduceCopy(pkToP1TransferMatrix));
+ MatrixCommunicator<GlobalMapper,
+ typename GridType::LeafGridView,
+ typename GridType::LeafGridView,
+ TransferOperatorType,
+ LocalMapper,
+ LeafP1LocalMapper,
+ GlobalLeafP1Mapper> matrixComm(*globalMapper_, p1Index, grid_->leafGridView(), grid_->leafGridView(), localMapper, leafP1LocalMapper, 0);
+
+ mmgStep->mgTransfer_.back() = std::make_shared<TruncatedCompressedMGTransfer<CorrectionType> >();
+ std::shared_ptr<TransferOperatorType> topTransferOperator = std::make_shared<TransferOperatorType>(matrixComm.reduceCopy(pkToP1TransferMatrix));
#else
- mmgStep->mgTransfer_.back() = std::make_shared<TruncatedCompressedMGTransfer<CorrectionType> >();
- std::shared_ptr<TransferOperatorType> topTransferOperator = std::make_shared<TransferOperatorType>(pkToP1TransferMatrix);
+ mmgStep->mgTransfer_.back() = std::make_shared<TruncatedCompressedMGTransfer<CorrectionType> >();
+ std::shared_ptr<TransferOperatorType> topTransferOperator = std::make_shared<TransferOperatorType>(pkToP1TransferMatrix);
#endif
- std::dynamic_pointer_cast<TruncatedCompressedMGTransfer<CorrectionType> >(mmgStep->mgTransfer_.back())->setMatrix(topTransferOperator);
- }
-
- // Now the P1/Q1 restriction operators for the remaining levels
- for (int i=0; i<numLevels-1; i++) {
-
- // Construct the local multigrid transfer matrix
- auto newTransferOp = std::make_unique<TruncatedCompressedMGTransfer<CorrectionType>>();
- newTransferOp->setup(*grid_,i,i+1);
-// The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
-#if HAVE_MPI && (!defined(GRID_DIM) or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM) or (defined(WORLD_DIM) && WORLD_DIM < 3))
- // If we are on more than 1 processors, join all local transfer matrices on rank 0,
- // and construct a single global transfer operator there.
- typedef Dune::Functions::LagrangeBasis<typename GridType::LevelGridView, 1> FEBasis;
- typedef Dune::GlobalP1Mapper<FEBasis> GlobalLevelP1Mapper;
- GlobalLevelP1Mapper fineGUIndex(grid_->levelGridView(i+1));
- GlobalLevelP1Mapper coarseGUIndex(grid_->levelGridView(i));
-
- typedef Dune::MultipleCodimMultipleGeomTypeMapper<typename GridType::LevelGridView> LevelLocalMapper;
- LevelLocalMapper fineLevelLocalMapper(grid_->levelGridView(i+1), Dune::mcmgVertexLayout());
- LevelLocalMapper coarseLevelLocalMapper(grid_->levelGridView(i), Dune::mcmgVertexLayout());
+ std::dynamic_pointer_cast<TruncatedCompressedMGTransfer<CorrectionType> >(mmgStep->mgTransfer_.back())->setMatrix(topTransferOperator);
+ }
+
+ // Now the P1/Q1 restriction operators for the remaining levels
+ for (int i=0; i<numLevels-1; i++) {
+
+ // Construct the local multigrid transfer matrix
+ auto newTransferOp = std::make_unique<TruncatedCompressedMGTransfer<CorrectionType> >();
+ newTransferOp->setup(*grid_,i,i+1);
+ // The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
+#if HAVE_MPI && (!defined(GRID_DIM)or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM)or (defined(WORLD_DIM) && WORLD_DIM < 3))
+ // If we are on more than 1 processors, join all local transfer matrices on rank 0,
+ // and construct a single global transfer operator there.
+ typedef Dune::Functions::LagrangeBasis<typename GridType::LevelGridView, 1> FEBasis;
+ typedef Dune::GlobalP1Mapper<FEBasis> GlobalLevelP1Mapper;
+ GlobalLevelP1Mapper fineGUIndex(grid_->levelGridView(i+1));
+ GlobalLevelP1Mapper coarseGUIndex(grid_->levelGridView(i));
+
+ typedef Dune::MultipleCodimMultipleGeomTypeMapper<typename GridType::LevelGridView> LevelLocalMapper;
+ LevelLocalMapper fineLevelLocalMapper(grid_->levelGridView(i+1), Dune::mcmgVertexLayout());
+ LevelLocalMapper coarseLevelLocalMapper(grid_->levelGridView(i), Dune::mcmgVertexLayout());
#endif
- typedef typename TruncatedCompressedMGTransfer<CorrectionType>::TransferOperatorType TransferOperatorType;
-// The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
-#if HAVE_MPI && (!defined(GRID_DIM) or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM) or (defined(WORLD_DIM) && WORLD_DIM < 3))
- MatrixCommunicator<GlobalLevelP1Mapper,
- typename GridType::LevelGridView,
- typename GridType::LevelGridView,
- TransferOperatorType,
- LevelLocalMapper,
- LevelLocalMapper> matrixComm(fineGUIndex, coarseGUIndex, grid_->levelGridView(i+1), grid_->levelGridView(i), fineLevelLocalMapper, coarseLevelLocalMapper, 0);
-
- mmgStep->mgTransfer_[i] = std::make_shared<TruncatedCompressedMGTransfer<CorrectionType> >();
- std::shared_ptr<TransferOperatorType> transferOperatorMatrix = std::make_shared<TransferOperatorType>(matrixComm.reduceCopy(newTransferOp->getMatrix()));
+ typedef typename TruncatedCompressedMGTransfer<CorrectionType>::TransferOperatorType TransferOperatorType;
+ // The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
+#if HAVE_MPI && (!defined(GRID_DIM)or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM)or (defined(WORLD_DIM) && WORLD_DIM < 3))
+ MatrixCommunicator<GlobalLevelP1Mapper,
+ typename GridType::LevelGridView,
+ typename GridType::LevelGridView,
+ TransferOperatorType,
+ LevelLocalMapper,
+ LevelLocalMapper> matrixComm(fineGUIndex, coarseGUIndex, grid_->levelGridView(i+1), grid_->levelGridView(i), fineLevelLocalMapper, coarseLevelLocalMapper, 0);
+
+ mmgStep->mgTransfer_[i] = std::make_shared<TruncatedCompressedMGTransfer<CorrectionType> >();
+ std::shared_ptr<TransferOperatorType> transferOperatorMatrix = std::make_shared<TransferOperatorType>(matrixComm.reduceCopy(newTransferOp->getMatrix()));
#else
- mmgStep->mgTransfer_[i] = std::make_shared<TruncatedCompressedMGTransfer<CorrectionType> >();
- std::shared_ptr<TransferOperatorType> transferOperatorMatrix = std::make_shared<TransferOperatorType>(newTransferOp->getMatrix());
+ mmgStep->mgTransfer_[i] = std::make_shared<TruncatedCompressedMGTransfer<CorrectionType> >();
+ std::shared_ptr<TransferOperatorType> transferOperatorMatrix = std::make_shared<TransferOperatorType>(newTransferOp->getMatrix());
#endif
- std::dynamic_pointer_cast<TruncatedCompressedMGTransfer<CorrectionType> >(mmgStep->mgTransfer_[i])->setMatrix(transferOperatorMatrix);
- }
-
- // //////////////////////////////////////////////////////////
- // Create obstacles
- // //////////////////////////////////////////////////////////
-
- if (rank==0)
- {
-// The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
-#if HAVE_MPI && (!defined(GRID_DIM) or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM) or (defined(WORLD_DIM) && WORLD_DIM < 3))
- hasObstacle_.resize(globalMapper_->size(), true);
+ std::dynamic_pointer_cast<TruncatedCompressedMGTransfer<CorrectionType> >(mmgStep->mgTransfer_[i])->setMatrix(transferOperatorMatrix);
+ }
+
+ // //////////////////////////////////////////////////////////
+ // Create obstacles
+ // //////////////////////////////////////////////////////////
+
+ if (rank==0)
+ {
+ // The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
+#if HAVE_MPI && (!defined(GRID_DIM)or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM)or (defined(WORLD_DIM) && WORLD_DIM < 3))
+ hasObstacle_.resize(globalMapper_->size(), true);
#else
- hasObstacle_.resize(basis.size(), true);
+ hasObstacle_.resize(basis.size(), true);
#endif
- mmgStep->setHasObstacles(hasObstacle_);
- }
+ mmgStep->setHasObstacles(hasObstacle_);
+ }
}
@@ -328,424 +328,424 @@ setup(const GridType& grid,
template <class Basis, class TargetSpace, class Assembler>
void RiemannianTrustRegionSolver<Basis,TargetSpace,Assembler>::solve()
{
- int rank = grid_->comm().rank();
+ int rank = grid_->comm().rank();
- MonotoneMGStep<MatrixType,CorrectionType>* mgStep = nullptr; // Non-shared pointer -- the innerSolver keeps the ownership
+ MonotoneMGStep<MatrixType,CorrectionType>* mgStep = nullptr; // Non-shared pointer -- the innerSolver keeps the ownership
- // if the inner solver is a monotone multigrid set up a max-norm trust-region
- if (dynamic_cast<LoopSolver<CorrectionType>*>(innerSolver_.get())) {
- auto loopSolver = std::dynamic_pointer_cast<LoopSolver<CorrectionType> >(innerSolver_);
- mgStep = dynamic_cast<MonotoneMGStep<MatrixType,CorrectionType>*>(&loopSolver->getIterationStep());
- }
+ // if the inner solver is a monotone multigrid set up a max-norm trust-region
+ if (dynamic_cast<LoopSolver<CorrectionType>*>(innerSolver_.get())) {
+ auto loopSolver = std::dynamic_pointer_cast<LoopSolver<CorrectionType> >(innerSolver_);
+ mgStep = dynamic_cast<MonotoneMGStep<MatrixType,CorrectionType>*>(&loopSolver->getIterationStep());
+ }
-// The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
-#if HAVE_MPI && (!defined(GRID_DIM) or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM) or (defined(WORLD_DIM) && WORLD_DIM < 3))
- MaxNormTrustRegion<blocksize> trustRegion(globalMapper_->size(), initialTrustRegionRadius_);
+ // The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
+#if HAVE_MPI && (!defined(GRID_DIM)or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM)or (defined(WORLD_DIM) && WORLD_DIM < 3))
+ MaxNormTrustRegion<blocksize> trustRegion(globalMapper_->size(), initialTrustRegionRadius_);
#else
- const Basis& basis = assembler_->getBasis();
- MaxNormTrustRegion<blocksize> trustRegion(basis.size(), initialTrustRegionRadius_);
+ const Basis& basis = assembler_->getBasis();
+ MaxNormTrustRegion<blocksize> trustRegion(basis.size(), initialTrustRegionRadius_);
#endif
- trustRegion.set(initialTrustRegionRadius_, scaling_);
- auto smallestScalingParameter = *std::min_element(std::begin(scaling_), std::end(scaling_));
-
- std::vector<BoxConstraint<field_type,blocksize> > trustRegionObstacles;
-
- // /////////////////////////////////////////////////////
- // Set up the log file, if requested
- // /////////////////////////////////////////////////////
- FILE* fp = nullptr;
- if (instrumented_) {
-
- fp = fopen("statistics", "w");
- if (!fp)
- DUNE_THROW(Dune::IOError, "Couldn't open statistics file for writing!");
+ trustRegion.set(initialTrustRegionRadius_, scaling_);
+ auto smallestScalingParameter = *std::min_element(std::begin(scaling_), std::end(scaling_));
+
+ std::vector<BoxConstraint<field_type,blocksize> > trustRegionObstacles;
+
+ // /////////////////////////////////////////////////////
+ // Set up the log file, if requested
+ // /////////////////////////////////////////////////////
+ FILE* fp = nullptr;
+ if (instrumented_) {
+
+ fp = fopen("statistics", "w");
+ if (!fp)
+ DUNE_THROW(Dune::IOError, "Couldn't open statistics file for writing!");
+
+ }
+
+ // /////////////////////////////////////////////////////
+ // Trust-Region Solver
+ // /////////////////////////////////////////////////////
+
+ Dune::Timer energyTimer;
+ double oldEnergy = assembler_->computeEnergy(x_);
+ if (this->verbosity_ == Solver::FULL)
+ std::cout << "Energy computation took " << energyTimer.elapsed() << " sec." << ", final energy: " << oldEnergy << std::endl;
+
+
+ oldEnergy = grid_->comm().sum(oldEnergy);
+
+ bool recomputeGradientHessian = true;
+ CorrectionType rhs;
+ MatrixType stiffnessMatrix;
+ CorrectionType rhs_global;
+ // The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
+#if HAVE_MPI && (!defined(GRID_DIM)or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM)or (defined(WORLD_DIM) && WORLD_DIM < 3))
+ VectorCommunicator<GlobalMapper, typename GridType::LeafGridView::CollectiveCommunication, CorrectionType> vectorComm(*globalMapper_,
+ grid_->leafGridView().comm(),
+ 0);
+ LocalMapper localMapper = MapperFactory<Basis>::createLocalMapper(grid_->leafGridView());
+ MatrixCommunicator<GlobalMapper,
+ typename GridType::LeafGridView,
+ typename GridType::LeafGridView,
+ MatrixType,
+ LocalMapper,
+ LocalMapper> matrixComm(*globalMapper_,
+ grid_->leafGridView(),
+ localMapper,
+ localMapper,
+ 0);
+#endif
+ auto& i = statistics_.finalIteration;
+ double totalAssemblyTime = 0.0;
+ double totalSolverTime = 0.0;
+ for (i=0; i<maxTrustRegionSteps_; i++) {
+ /* std::cout << "current iterate:\n";
+ for (size_t j=0; j<x_.size(); j++)
+ std::cout << x_[j] << std::endl;*/
+
+ Dune::Timer totalTimer;
+ if (this->verbosity_ == Solver::FULL and rank==0) {
+ std::cout << "----------------------------------------------------" << std::endl;
+ std::cout << " Trust-Region Step Number: " << i
+ << ", radius: " << trustRegion.radius()
+ << ", energy: " << oldEnergy << std::endl;
+ std::cout << "----------------------------------------------------" << std::endl;
}
- // /////////////////////////////////////////////////////
- // Trust-Region Solver
- // /////////////////////////////////////////////////////
-
- Dune::Timer energyTimer;
- double oldEnergy = assembler_->computeEnergy(x_);
- if (this->verbosity_ == Solver::FULL)
- std::cout << "Energy computation took " << energyTimer.elapsed() << " sec." << ", final energy: " << oldEnergy << std::endl;
-
-
- oldEnergy = grid_->comm().sum(oldEnergy);
-
- bool recomputeGradientHessian = true;
- CorrectionType rhs;
- MatrixType stiffnessMatrix;
- CorrectionType rhs_global;
-// The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
-#if HAVE_MPI && (!defined(GRID_DIM) or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM) or (defined(WORLD_DIM) && WORLD_DIM < 3))
- VectorCommunicator<GlobalMapper, typename GridType::LeafGridView::CollectiveCommunication, CorrectionType> vectorComm(*globalMapper_,
- grid_->leafGridView().comm(),
- 0);
- LocalMapper localMapper = MapperFactory<Basis>::createLocalMapper(grid_->leafGridView());
- MatrixCommunicator<GlobalMapper,
- typename GridType::LeafGridView,
- typename GridType::LeafGridView,
- MatrixType,
- LocalMapper,
- LocalMapper> matrixComm(*globalMapper_,
- grid_->leafGridView(),
- localMapper,
- localMapper,
- 0);
-#endif
- auto& i = statistics_.finalIteration;
- double totalAssemblyTime = 0.0;
- double totalSolverTime = 0.0;
- for (i=0; i<maxTrustRegionSteps_; i++) {
-
-/* std::cout << "current iterate:\n";
- for (size_t j=0; j<x_.size(); j++)
- std::cout << x_[j] << std::endl;*/
-
- Dune::Timer totalTimer;
- if (this->verbosity_ == Solver::FULL and rank==0) {
- std::cout << "----------------------------------------------------" << std::endl;
- std::cout << " Trust-Region Step Number: " << i
- << ", radius: " << trustRegion.radius()
- << ", energy: " << oldEnergy << std::endl;
- std::cout << "----------------------------------------------------" << std::endl;
- }
-
- CorrectionType corr(x_.size());
- corr = 0;
+ CorrectionType corr(x_.size());
+ corr = 0;
- Dune::Timer gradientTimer;
+ Dune::Timer gradientTimer;
- if (recomputeGradientHessian) {
+ if (recomputeGradientHessian) {
- assembler_->assembleGradientAndHessian(x_,
- rhs,
- *hessianMatrix_,
- i==0 // assemble occupation pattern only for the first call
- );
- std::cout << "Assembly took " << gradientTimer.elapsed() << " sec." << std::endl;
+ assembler_->assembleGradientAndHessian(x_,
+ rhs,
+ *hessianMatrix_,
+ i==0 // assemble occupation pattern only for the first call
+ );
+ std::cout << "Assembly took " << gradientTimer.elapsed() << " sec." << std::endl;
- rhs *= -1; // The right hand side is the _negative_ gradient
+ rhs *= -1; // The right hand side is the _negative_ gradient
- // Transfer vector data
-// The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
-#if HAVE_MPI && (!defined(GRID_DIM) or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM) or (defined(WORLD_DIM) && WORLD_DIM < 3))
- rhs_global = vectorComm.reduceAdd(rhs);
+ // Transfer vector data
+ // The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
+#if HAVE_MPI && (!defined(GRID_DIM)or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM)or (defined(WORLD_DIM) && WORLD_DIM < 3))
+ rhs_global = vectorComm.reduceAdd(rhs);
#else
- rhs_global = rhs;
+ rhs_global = rhs;
#endif
- CorrectionType gradient = rhs_global;
- for (size_t j=0; j<gradient.size(); j++)
- for (size_t k=0; k<gradient[j].size(); k++)
- if ((*mgStep->ignoreNodes_)[j][k]) // global Dirichlet nodes set
- gradient[j][k] = 0;
-
- if (this->verbosity_ == Solver::FULL and rank==0) {
- std::cout << "Gradient operator norm: " << l2Norm_->operator()(gradient) << std::endl;
- std::cout << "Gradient norm: " << gradient.two_norm() << std::endl;
- }
- if (this->verbosity_ == Solver::FULL and rank==0)
- std::cout << "Overall assembly took " << gradientTimer.elapsed() << " sec." << std::endl;
- totalAssemblyTime += gradientTimer.elapsed();
-
-// The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
-#if HAVE_MPI && (!defined(GRID_DIM) or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM) or (defined(WORLD_DIM) && WORLD_DIM < 3))
- stiffnessMatrix = matrixComm.reduceAdd(*hessianMatrix_);
+ CorrectionType gradient = rhs_global;
+ for (size_t j=0; j<gradient.size(); j++)
+ for (size_t k=0; k<gradient[j].size(); k++)
+ if ((*mgStep->ignoreNodes_)[j][k]) // global Dirichlet nodes set
+ gradient[j][k] = 0;
+
+ if (this->verbosity_ == Solver::FULL and rank==0) {
+ std::cout << "Gradient operator norm: " << l2Norm_->operator()(gradient) << std::endl;
+ std::cout << "Gradient norm: " << gradient.two_norm() << std::endl;
+ }
+ if (this->verbosity_ == Solver::FULL and rank==0)
+ std::cout << "Overall assembly took " << gradientTimer.elapsed() << " sec." << std::endl;
+ totalAssemblyTime += gradientTimer.elapsed();
+
+ // The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
+#if HAVE_MPI && (!defined(GRID_DIM)or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM)or (defined(WORLD_DIM) && WORLD_DIM < 3))
+ stiffnessMatrix = matrixComm.reduceAdd(*hessianMatrix_);
#else
- stiffnessMatrix = *hessianMatrix_;
+ stiffnessMatrix = *hessianMatrix_;
#endif
- recomputeGradientHessian = false;
-
- }
+ recomputeGradientHessian = false;
- CorrectionType corr_global(rhs_global.size());
- corr_global = 0;
- bool solved = true;
+ }
- if (rank==0)
- {
- mgStep->setProblem(stiffnessMatrix, corr_global, rhs_global);
+ CorrectionType corr_global(rhs_global.size());
+ corr_global = 0;
+ bool solved = true;
- trustRegionObstacles = trustRegion.obstacles();
- mgStep->setObstacles(trustRegionObstacles);
+ if (rank==0)
+ {
+ mgStep->setProblem(stiffnessMatrix, corr_global, rhs_global);
- innerSolver_->preprocess();
+ trustRegionObstacles = trustRegion.obstacles();
+ mgStep->setObstacles(trustRegionObstacles);
- ///////////////////////////////
- // Solve !
- ///////////////////////////////
+ innerSolver_->preprocess();
- std::cout << "Solve quadratic problem..." << std::endl;
+ ///////////////////////////////
+ // Solve !
+ ///////////////////////////////
- Dune::Timer solutionTimer;
- try {
- innerSolver_->solve();
- } catch (Dune::Exception &e) {
- std::cerr << "Error while solving: " << e << std::endl;
- solved = false;
- }
- std::cout << "Solving the quadratic problem took " << solutionTimer.elapsed() << " seconds." << std::endl;
- totalSolverTime += solutionTimer.elapsed();
+ std::cout << "Solve quadratic problem..." << std::endl;
- if (mgStep && solved) {
- corr_global = mgStep->getSol();
- std::cout << "Two norm of the correction: " << corr_global.two_norm() << std::endl;
- }
- }
+ Dune::Timer solutionTimer;
+ try {
+ innerSolver_->solve();
+ } catch (Dune::Exception &e) {
+ std::cerr << "Error while solving: " << e << std::endl;
+ solved = false;
+ }
+ std::cout << "Solving the quadratic problem took " << solutionTimer.elapsed() << " seconds." << std::endl;
+ totalSolverTime += solutionTimer.elapsed();
- // Distribute solution
- if (grid_->comm().size()>1 and rank==0)
- std::cout << "Transfer solution back to root process ..." << std::endl;
+ if (mgStep && solved) {
+ corr_global = mgStep->getSol();
+ std::cout << "Two norm of the correction: " << corr_global.two_norm() << std::endl;
+ }
+ }
-// The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
-#if HAVE_MPI && (!defined(GRID_DIM) or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM) or (defined(WORLD_DIM) && WORLD_DIM < 3))
- solved = grid_->comm().min(solved);
- if (solved) {
- corr = vectorComm.scatter(corr_global);
- } else {
- corr_global = 0;
- corr = 0;
- }
+ // Distribute solution
+ if (grid_->comm().size()>1 and rank==0)
+ std::cout << "Transfer solution back to root process ..." << std::endl;
+
+ // The VectorCommunicator and MatrixCommunicator work only for GRID_DIM == WORLD_DIM == 2 or GRID_DIM == WORLD_DIM == 3
+#if HAVE_MPI && (!defined(GRID_DIM)or (defined(GRID_DIM) && GRID_DIM < 3)) && (!defined(WORLD_DIM)or (defined(WORLD_DIM) && WORLD_DIM < 3))
+ solved = grid_->comm().min(solved);
+ if (solved) {
+ corr = vectorComm.scatter(corr_global);
+ } else {
+ corr_global = 0;
+ corr = 0;
+ }
#else
- corr = corr_global;
+ corr = corr_global;
#endif
- double corrNorm;
- if (normType_ == ErrorNormType::infinity)
- corrNorm = corr.infinity_norm();
- else if (normType_ == ErrorNormType::H1semi)
- corrNorm = h1SemiNorm_->operator()(corr);
- else
- DUNE_THROW(Dune::Exception, "Unknown norm type for stopping criterion!");
+ double corrNorm;
+ if (normType_ == ErrorNormType::infinity)
+ corrNorm = corr.infinity_norm();
+ else if (normType_ == ErrorNormType::H1semi)
+ corrNorm = h1SemiNorm_->operator()(corr);
+ else
+ DUNE_THROW(Dune::Exception, "Unknown norm type for stopping criterion!");
+
+ // Make norm of corr_global known on all processors
+ double corrGlobalNorm = grid_->comm().max(corrNorm);
- // Make norm of corr_global known on all processors
- double corrGlobalNorm = grid_->comm().max(corrNorm);
+ if (instrumented_) {
- if (instrumented_) {
+ fprintf(fp, "Trust-region step: %ld, trust-region radius: %g\n",
+ i, trustRegion.radius());
- fprintf(fp, "Trust-region step: %ld, trust-region radius: %g\n",
- i, trustRegion.radius());
+ // ///////////////////////////////////////////////////////////////
+ // Compute and measure progress against the exact solution
+ // for each trust region step
+ // ///////////////////////////////////////////////////////////////
- // ///////////////////////////////////////////////////////////////
- // Compute and measure progress against the exact solution
- // for each trust region step
- // ///////////////////////////////////////////////////////////////
+ CorrectionType exactSolution = corr;
- CorrectionType exactSolution = corr;
+ // Start from 0
+ double oldError = 0;
+ double totalConvRate = 1;
+ double convRate = 1;
- // Start from 0
- double oldError = 0;
- double totalConvRate = 1;
- double convRate = 1;
+ // Write statistics of the initial solution
+ // Compute the energy norm
+ oldError = h1SemiNorm_->operator()(exactSolution);
- // Write statistics of the initial solution
- // Compute the energy norm
- oldError = h1SemiNorm_->operator()(exactSolution);
+ for (int j=0; j<innerIterations_; j++) {
- for (int j=0; j<innerIterations_; j++) {
+ // read iteration from file
+ CorrectionType intermediateSol(grid_->size(gridDim));
+ intermediateSol = 0;
+ char iSolFilename[100];
+ sprintf(iSolFilename, "tmp/mgHistory/intermediatesolution_%04d", j);
- // read iteration from file
- CorrectionType intermediateSol(grid_->size(gridDim));
- intermediateSol = 0;
- char iSolFilename[100];
- sprintf(iSolFilename, "tmp/mgHistory/intermediatesolution_%04d", j);
+ FILE* fpInt = fopen(iSolFilename, "rb");
+ if (!fpInt)
+ DUNE_THROW(Dune::IOError, "Couldn't open intermediate solution");
+ for (size_t k=0; k<intermediateSol.size(); k++)
+ for (int l=0; l<blocksize; l++)
+ fread(&intermediateSol[k][l], sizeof(double), 1, fpInt);
- FILE* fpInt = fopen(iSolFilename, "rb");
- if (!fpInt)
- DUNE_THROW(Dune::IOError, "Couldn't open intermediate solution");
- for (size_t k=0; k<intermediateSol.size(); k++)
- for (int l=0; l<blocksize; l++)
- fread(&intermediateSol[k][l], sizeof(double), 1, fpInt);
+ fclose(fpInt);
+ //std::cout << "intermediateSol\n" << intermediateSol << std::endl;
- fclose(fpInt);
- //std::cout << "intermediateSol\n" << intermediateSol << std::endl;
+ // Compute errors
+ intermediateSol -= exactSolution;
- // Compute errors
- intermediateSol -= exactSolution;
+ //std::cout << "error\n" << intermediateSol << std::endl;
- //std::cout << "error\n" << intermediateSol << std::endl;
+ // Compute the H1 norm
+ double error = h1SemiNorm_->operator()(intermediateSol);
- // Compute the H1 norm
- double error = h1SemiNorm_->operator()(intermediateSol);
+ convRate = error / oldError;
+ totalConvRate *= convRate;
- convRate = error / oldError;
- totalConvRate *= convRate;
+ if (error < 1e-12)
+ break;
- if (error < 1e-12)
- break;
+ std::cout << "Iteration: " << j << " ";
+ std::cout << "Errors: error " << error << ", convergence rate: " << convRate
+ << ", total conv rate " << pow(totalConvRate, 1/((double)j+1)) << std::endl;
- std::cout << "Iteration: " << j << " ";
- std::cout << "Errors: error " << error << ", convergence rate: " << convRate
- << ", total conv rate " << pow(totalConvRate, 1/((double)j+1)) << std::endl;
+ fprintf(fp, "%d %g %g %g\n", j+1, error, convRate, pow(totalConvRate, 1/((double)j+1)));
- fprintf(fp, "%d %g %g %g\n", j+1, error, convRate, pow(totalConvRate, 1/((double)j+1)));
+ oldError = error;
- oldError = error;
+ }
- }
+ }
+ double energy = 0;
+ double modelDecrease = 0;
+ SolutionType newIterate = x_;
+ if (i == maxTrustRegionSteps_ - 1)
+ std::cout << i+1 << " trust-region steps were taken, the maximum was reached." << std::endl << "Total solver time: " << totalSolverTime << " sec., total assembly time: " << totalAssemblyTime << " sec." << std::endl;
+
+ if (solved) {
+ if (this->verbosity_ == NumProc::FULL and rank==0)
+ if (normType_ == ErrorNormType::infinity)
+ std::cout << "infinity norm of the correction: " << corrGlobalNorm << std::endl;
+ else if (normType_ == ErrorNormType::H1semi)
+ std::cout << "H1-semi norm of the correction: " << corrGlobalNorm << std::endl;
+ else
+ DUNE_THROW(Dune::Exception, "Unknown norm type for stopping criterion!");
+
+ if (corrGlobalNorm < this->tolerance_ && corrGlobalNorm < trustRegion.radius()*smallestScalingParameter) {
+ if (this->verbosity_ == NumProc::FULL and rank==0)
+ std::cout << "CORRECTION IS SMALL ENOUGH" << std::endl;
+
+ if (this->verbosity_ != NumProc::QUIET and rank==0)
+ std::cout << i+1 << " trust-region steps were taken" << std::endl << "Total solver time: " << totalSolverTime << " sec., total assembly time: " << totalAssemblyTime << " sec." << std::endl;
+ break;
+ }
+
+ // ////////////////////////////////////////////////////
+ // Check whether trust-region step can be accepted
+ // ////////////////////////////////////////////////////
+
+ for (size_t j=0; j<newIterate.size(); j++)
+ newIterate[j] = TargetSpace::exp(newIterate[j], corr[j]);
+ try {
+ energy = assembler_->computeEnergy(newIterate);
+ } catch (Dune::Exception &e) {
+ std::cerr << "Error while computing the energy of the new iterate: " << e << std::endl;
+ std::cerr << "Redoing trust region step with smaller radius..." << std::endl;
+ solved = false;
+ }
+ solved = grid_->comm().min(solved);
+
+ if (!solved) {
+ newIterate = x_;
+ energy = oldEnergy;
+ } else {
+ energy = grid_->comm().sum(energy);
+
+ // compute the model decrease
+ // It is $ m(x) - m(x+s) = -<g,s> - 0.5 <s, Hs>
+ // Note that rhs = -g
+ CorrectionType tmp(corr.size());
+ tmp = 0;
+ hessianMatrix_->umv(corr, tmp);
+ modelDecrease = (rhs*corr) - 0.5 * (corr*tmp);
+ modelDecrease = grid_->comm().sum(modelDecrease);
+
+ double relativeModelDecrease = modelDecrease / std::fabs(energy);
+
+ if (this->verbosity_ == NumProc::FULL and rank==0) {
+ std::cout << "Absolute model decrease: " << modelDecrease
+ << ", functional decrease: " << oldEnergy - energy << std::endl;
+ std::cout << "Relative model decrease: " << relativeModelDecrease
+ << ", functional decrease: " << (oldEnergy - energy)/energy << std::endl;
+ }
+ assert(modelDecrease >= 0);
+
+ if (energy >= oldEnergy and rank==0) {
+ if (this->verbosity_ == NumProc::FULL)
+ std::cout << "Direction is not a descent direction!" << std::endl;
}
- double energy = 0;
- double modelDecrease = 0;
- SolutionType newIterate = x_;
- if (i == maxTrustRegionSteps_ - 1)
- std::cout << i+1 << " trust-region steps were taken, the maximum was reached." << std::endl << "Total solver time: " << totalSolverTime << " sec., total assembly time: " << totalAssemblyTime << " sec." << std::endl;
-
- if (solved) {
- if (this->verbosity_ == NumProc::FULL and rank==0)
- if (normType_ == ErrorNormType::infinity)
- std::cout << "infinity norm of the correction: " << corrGlobalNorm << std::endl;
- else if (normType_ == ErrorNormType::H1semi)
- std::cout << "H1-semi norm of the correction: " << corrGlobalNorm << std::endl;
- else
- DUNE_THROW(Dune::Exception, "Unknown norm type for stopping criterion!");
-
- if (corrGlobalNorm < this->tolerance_ && corrGlobalNorm < trustRegion.radius()*smallestScalingParameter) {
- if (this->verbosity_ == NumProc::FULL and rank==0)
- std::cout << "CORRECTION IS SMALL ENOUGH" << std::endl;
-
- if (this->verbosity_ != NumProc::QUIET and rank==0)
- std::cout << i+1 << " trust-region steps were taken" << std::endl << "Total solver time: " << totalSolverTime << " sec., total assembly time: " << totalAssemblyTime << " sec." << std::endl;
- break;
- }
-
- // ////////////////////////////////////////////////////
- // Check whether trust-region step can be accepted
- // ////////////////////////////////////////////////////
-
- for (size_t j=0; j<newIterate.size(); j++)
- newIterate[j] = TargetSpace::exp(newIterate[j], corr[j]);
- try {
- energy = assembler_->computeEnergy(newIterate);
- } catch (Dune::Exception &e) {
- std::cerr << "Error while computing the energy of the new iterate: " << e << std::endl;
- std::cerr << "Redoing trust region step with smaller radius..." << std::endl;
- solved = false;
- }
- solved = grid_->comm().min(solved);
-
- if (!solved) {
- newIterate = x_;
- energy = oldEnergy;
- } else {
- energy = grid_->comm().sum(energy);
-
- // compute the model decrease
- // It is $ m(x) - m(x+s) = -<g,s> - 0.5 <s, Hs>
- // Note that rhs = -g
- CorrectionType tmp(corr.size());
- tmp = 0;
- hessianMatrix_->umv(corr, tmp);
- modelDecrease = (rhs*corr) - 0.5 * (corr*tmp);
- modelDecrease = grid_->comm().sum(modelDecrease);
-
- double relativeModelDecrease = modelDecrease / std::fabs(energy);
-
- if (this->verbosity_ == NumProc::FULL and rank==0) {
- std::cout << "Absolute model decrease: " << modelDecrease
- << ", functional decrease: " << oldEnergy - energy << std::endl;
- std::cout << "Relative model decrease: " << relativeModelDecrease
- << ", functional decrease: " << (oldEnergy - energy)/energy << std::endl;
- }
- assert(modelDecrease >= 0);
-
-
- if (energy >= oldEnergy and rank==0) {
- if (this->verbosity_ == NumProc::FULL)
- std::cout << "Direction is not a descent direction!" << std::endl;
- }
-
- if (energy >= oldEnergy &&
- (std::abs((oldEnergy-energy)/energy) < 1e-9 || relativeModelDecrease < 1e-9)) {
- if (this->verbosity_ == NumProc::FULL and rank==0)
- std::cout << "Suspecting rounding problems" << std::endl;
-
- if (this->verbosity_ != NumProc::QUIET and rank==0)
- std::cout << i+1 << " trust-region steps were taken." << std::endl;
-
- x_ = newIterate;
- break;
- }
- }
+
+ if (energy >= oldEnergy &&
+ (std::abs((oldEnergy-energy)/energy) < 1e-9 || relativeModelDecrease < 1e-9)) {
+ if (this->verbosity_ == NumProc::FULL and rank==0)
+ std::cout << "Suspecting rounding problems" << std::endl;
+
+ if (this->verbosity_ != NumProc::QUIET and rank==0)
+ std::cout << i+1 << " trust-region steps were taken." << std::endl;
+
+ x_ = newIterate;
+ break;
}
+ }
+ }
- // //////////////////////////////////////////////
- // Check for acceptance of the step
- // //////////////////////////////////////////////
- if (solved && (oldEnergy-energy) / modelDecrease > 0.9) {
- // very successful iteration
+ // //////////////////////////////////////////////
+ // Check for acceptance of the step
+ // //////////////////////////////////////////////
+ if (solved && (oldEnergy-energy) / modelDecrease > 0.9) {
+ // very successful iteration
- x_ = newIterate;
- trustRegion.scale(2);
+ x_ = newIterate;
+ trustRegion.scale(2);
- // current energy becomes 'oldEnergy' for the next iteration
- oldEnergy = energy;
+ // current energy becomes 'oldEnergy' for the next iteration
+ oldEnergy = energy;
- recomputeGradientHessian = true;
+ recomputeGradientHessian = true;
- } else if (solved && ((oldEnergy-energy) / modelDecrease > 0.01
- || std::abs(oldEnergy-energy) < 1e-12)) {
- // successful iteration
- x_ = newIterate;
+ } else if (solved && ((oldEnergy-energy) / modelDecrease > 0.01
+ || std::abs(oldEnergy-energy) < 1e-12)) {
+ // successful iteration
+ x_ = newIterate;
- // current energy becomes 'oldEnergy' for the next iteration
- oldEnergy = energy;
+ // current energy becomes 'oldEnergy' for the next iteration
+ oldEnergy = energy;
- recomputeGradientHessian = true;
+ recomputeGradientHessian = true;
- } else {
+ } else {
- // unsuccessful iteration
+ // unsuccessful iteration
- // Decrease the trust-region radius
- trustRegion.scale(0.5);
+ // Decrease the trust-region radius
+ trustRegion.scale(0.5);
- if (this->verbosity_ == NumProc::FULL and rank==0)
- std::cout << "Unsuccessful iteration!" << std::endl;
- if (trustRegion.radius() < 1e-9) {
- if (this->verbosity_ == NumProc::FULL and rank==0)
- std::cout << "The radius is too small to continue with a meaningful calculation!" << std::endl;
+ if (this->verbosity_ == NumProc::FULL and rank==0)
+ std::cout << "Unsuccessful iteration!" << std::endl;
+ if (trustRegion.radius() < 1e-9) {
+ if (this->verbosity_ == NumProc::FULL and rank==0)
+ std::cout << "The radius is too small to continue with a meaningful calculation!" << std::endl;
- if (this->verbosity_ != NumProc::QUIET and rank==0)
- std::cout << i+1 << " trust-region steps were taken" << std::endl << "Total solver time: " << totalSolverTime << " sec., total assembly time: " << totalAssemblyTime << " sec." << std::endl;
- break;
- }
- }
+ if (this->verbosity_ != NumProc::QUIET and rank==0)
+ std::cout << i+1 << " trust-region steps were taken" << std::endl << "Total solver time: " << totalSolverTime << " sec., total assembly time: " << totalAssemblyTime << " sec." << std::endl;
+ break;
+ }
+ }
- // /////////////////////////////////////////////////////////////////////
- // Write the iterate to disk for later convergence rate measurement
- // /////////////////////////////////////////////////////////////////////
+ // /////////////////////////////////////////////////////////////////////
+ // Write the iterate to disk for later convergence rate measurement
+ // /////////////////////////////////////////////////////////////////////
- if (instrumented_) {
+ if (instrumented_) {
- char iFilename[100];
- sprintf(iFilename, "tmp/intermediateSolution_%04ld", i);
+ char iFilename[100];
+ sprintf(iFilename, "tmp/intermediateSolution_%04ld", i);
- FILE* fpIterate = fopen(iFilename, "wb");
- if (!fpIterate)
- DUNE_THROW(SolverError, "Couldn't open file " << iFilename << " for writing");
+ FILE* fpIterate = fopen(iFilename, "wb");
+ if (!fpIterate)
+ DUNE_THROW(SolverError, "Couldn't open file " << iFilename << " for writing");
- for (size_t j=0; j<x_.size(); j++)
- fwrite(&x_[j], sizeof(TargetSpace), 1, fpIterate);
+ for (size_t j=0; j<x_.size(); j++)
+ fwrite(&x_[j], sizeof(TargetSpace), 1, fpIterate);
- fclose(fpIterate);
-
- }
+ fclose(fpIterate);
- if (rank==0)
- std::cout << "iteration took " << totalTimer.elapsed() << " sec." << std::endl;
}
- // //////////////////////////////////////////////
- // Close logfile
- // //////////////////////////////////////////////
- if (instrumented_)
- fclose(fp);
+ if (rank==0)
+ std::cout << "iteration took " << totalTimer.elapsed() << " sec." << std::endl;
+ }
+
+ // //////////////////////////////////////////////
+ // Close logfile
+ // //////////////////////////////////////////////
+ if (instrumented_)
+ fclose(fp);
- statistics_.finalEnergy = oldEnergy;
+ statistics_.finalEnergy = oldEnergy;
}
diff --git a/dune/gfe/riemanniantrsolver.hh b/dune/gfe/riemanniantrsolver.hh
index 78eacc6f..1d892f33 100644
--- a/dune/gfe/riemanniantrsolver.hh
+++ b/dune/gfe/riemanniantrsolver.hh
@@ -32,185 +32,185 @@ struct MapperFactory
template <typename GridView>
struct MapperFactory<Dune::Functions::LagrangeBasis<GridView,1> >
{
- typedef Dune::GlobalP1Mapper<Dune::Functions::LagrangeBasis<GridView,1>> GlobalMapper;
- typedef Dune::MultipleCodimMultipleGeomTypeMapper<GridView> LocalMapper;
- static LocalMapper createLocalMapper(const GridView& gridView)
- {
- return LocalMapper(gridView, Dune::mcmgVertexLayout());
- }
+ typedef Dune::GlobalP1Mapper<Dune::Functions::LagrangeBasis<GridView,1> > GlobalMapper;
+ typedef Dune::MultipleCodimMultipleGeomTypeMapper<GridView> LocalMapper;
+ static LocalMapper createLocalMapper(const GridView& gridView)
+ {
+ return LocalMapper(gridView, Dune::mcmgVertexLayout());
+ }
};
template <typename GridView>
struct MapperFactory<Dune::Functions::LagrangeBasis<GridView,2> >
{
- typedef Dune::GlobalP2Mapper<Dune::Functions::LagrangeBasis<GridView,2>> GlobalMapper;
- typedef P2BasisMapper<GridView> LocalMapper;
- static LocalMapper createLocalMapper(const GridView& gridView)
- {
- return LocalMapper(gridView);
- }
+ typedef Dune::GlobalP2Mapper<Dune::Functions::LagrangeBasis<GridView,2> > GlobalMapper;
+ typedef P2BasisMapper<GridView> LocalMapper;
+ static LocalMapper createLocalMapper(const GridView& gridView)
+ {
+ return LocalMapper(gridView);
+ }
};
/** \brief Specialization for LagrangeBasis<3> */
template <typename GridView>
struct MapperFactory<Dune::Functions::LagrangeBasis<GridView,3> >
{
- // Error: we don't currently have a global P3 mapper
+ // Error: we don't currently have a global P3 mapper
};
/** \brief Riemannian trust-region solver for geodesic finite-element problems */
-template <class Basis, class TargetSpace, class Assembler = GeodesicFEAssembler<Basis,TargetSpace>>
+template <class Basis, class TargetSpace, class Assembler = GeodesicFEAssembler<Basis,TargetSpace> >
class RiemannianTrustRegionSolver
- : public IterativeSolver<std::vector<TargetSpace>,
- Dune::BitSetVector<TargetSpace::TangentVector::dimension> >
+ : public IterativeSolver<std::vector<TargetSpace>,
+ Dune::BitSetVector<TargetSpace::TangentVector::dimension> >
{
- typedef typename Basis::GridView::Grid GridType;
+ typedef typename Basis::GridView::Grid GridType;
- const static int blocksize = TargetSpace::TangentVector::dimension;
+ const static int blocksize = TargetSpace::TangentVector::dimension;
- const static int gridDim = GridType::dimension;
+ const static int gridDim = GridType::dimension;
- // Centralize the field type here
- typedef double field_type;
+ // Centralize the field type here
+ typedef double field_type;
- // Some types that I need
- typedef Dune::BCRSMatrix<Dune::FieldMatrix<field_type, blocksize, blocksize> > MatrixType;
- typedef Dune::BlockVector<Dune::FieldVector<field_type, blocksize> > CorrectionType;
- typedef std::vector<TargetSpace> SolutionType;
+ // Some types that I need
+ typedef Dune::BCRSMatrix<Dune::FieldMatrix<field_type, blocksize, blocksize> > MatrixType;
+ typedef Dune::BlockVector<Dune::FieldVector<field_type, blocksize> > CorrectionType;
+ typedef std::vector<TargetSpace> SolutionType;
#if HAVE_MPI
- typedef typename MapperFactory<Basis>::GlobalMapper GlobalMapper;
- typedef typename MapperFactory<Basis>::LocalMapper LocalMapper;
+ typedef typename MapperFactory<Basis>::GlobalMapper GlobalMapper;
+ typedef typename MapperFactory<Basis>::LocalMapper LocalMapper;
#endif
- /** \brief Records information about the last run of the RiemannianTrustRegionSolver
- *
- * This is used primarily for unit testing.
- */
- struct Statistics
- {
- std::size_t finalIteration;
+ /** \brief Records information about the last run of the RiemannianTrustRegionSolver
+ *
+ * This is used primarily for unit testing.
+ */
+ struct Statistics
+ {
+ std::size_t finalIteration;
- field_type finalEnergy;
- };
+ field_type finalEnergy;
+ };
public:
- RiemannianTrustRegionSolver()
- : IterativeSolver<std::vector<TargetSpace>, Dune::BitSetVector<blocksize> >(0,100,NumProc::FULL),
- hessianMatrix_(nullptr), h1SemiNorm_(NULL)
- {
- std::fill(scaling_.begin(), scaling_.end(), 1.0);
- }
-
- /** \brief Set up the solver using a monotone multigrid method as the inner solver */
- void setup(const GridType& grid,
- const Assembler* assembler,
- const SolutionType& x,
- const Dune::BitSetVector<blocksize>& dirichletNodes,
- double tolerance,
- int maxTrustRegionSteps,
- double initialTrustRegionRadius,
- int multigridIterations,
- double mgTolerance,
- int mu,
- int nu1,
- int nu2,
- int baseIterations,
- double baseTolerance,
- bool instrumented);
-
- /** \brief Set up the solver using a monotone multigrid method as the inner solver */
- void setup(const GridType& grid,
- const Assembler* assembler,
- const SolutionType& x,
- const Dune::BitSetVector<blocksize>& dirichletNodes,
- const Dune::ParameterTree& parameterSet);
-
- void setScaling(const Dune::FieldVector<double,blocksize>& scaling)
- {
- scaling_ = scaling;
- }
-
- void setIgnoreNodes(const Dune::BitSetVector<blocksize>& ignoreNodes)
- {
- ignoreNodes_ = &ignoreNodes;
- std::shared_ptr<LoopSolver<CorrectionType> > loopSolver = std::dynamic_pointer_cast<LoopSolver<CorrectionType> >(innerSolver_);
- assert(loopSolver);
- loopSolver->iterationStep_->ignoreNodes_ = ignoreNodes_;
- }
-
- void solve();
-
- [[deprecated]]
- void setInitialSolution(const SolutionType& x) {
- x_ = x;
- }
-
- void setInitialIterate(const SolutionType& x) {
- x_ = x;
- }
-
- SolutionType getSol() const {return x_;}
-
- const Statistics& getStatistics() const {return statistics_;}
+ RiemannianTrustRegionSolver()
+ : IterativeSolver<std::vector<TargetSpace>, Dune::BitSetVector<blocksize> >(0,100,NumProc::FULL),
+ hessianMatrix_(nullptr), h1SemiNorm_(NULL)
+ {
+ std::fill(scaling_.begin(), scaling_.end(), 1.0);
+ }
+
+ /** \brief Set up the solver using a monotone multigrid method as the inner solver */
+ void setup(const GridType& grid,
+ const Assembler* assembler,
+ const SolutionType& x,
+ const Dune::BitSetVector<blocksize>& dirichletNodes,
+ double tolerance,
+ int maxTrustRegionSteps,
+ double initialTrustRegionRadius,
+ int multigridIterations,
+ double mgTolerance,
+ int mu,
+ int nu1,
+ int nu2,
+ int baseIterations,
+ double baseTolerance,
+ bool instrumented);
+
+ /** \brief Set up the solver using a monotone multigrid method as the inner solver */
+ void setup(const GridType& grid,
+ const Assembler* assembler,
+ const SolutionType& x,
+ const Dune::BitSetVector<blocksize>& dirichletNodes,
+ const Dune::ParameterTree& parameterSet);
+
+ void setScaling(const Dune::FieldVector<double,blocksize>& scaling)
+ {
+ scaling_ = scaling;
+ }
+
+ void setIgnoreNodes(const Dune::BitSetVector<blocksize>& ignoreNodes)
+ {
+ ignoreNodes_ = &ignoreNodes;
+ std::shared_ptr<LoopSolver<CorrectionType> > loopSolver = std::dynamic_pointer_cast<LoopSolver<CorrectionType> >(innerSolver_);
+ assert(loopSolver);
+ loopSolver->iterationStep_->ignoreNodes_ = ignoreNodes_;
+ }
+
+ void solve();
+
+ [[deprecated]]
+ void setInitialSolution(const SolutionType& x) {
+ x_ = x;
+ }
+
+ void setInitialIterate(const SolutionType& x) {
+ x_ = x;
+ }
+
+ SolutionType getSol() const {return x_;}
+
+ const Statistics& getStatistics() const {return statistics_;}
protected:
#if HAVE_MPI
- std::unique_ptr<GlobalMapper> globalMapper_;
+ std::unique_ptr<GlobalMapper> globalMapper_;
#endif
- /** \brief The grid */
- const GridType* grid_;
+ /** \brief The grid */
+ const GridType* grid_;
- /** \brief The solution vector */
- SolutionType x_;
+ /** \brief The solution vector */
+ SolutionType x_;
- /** \brief The initial trust-region radius in the maximum-norm */
- double initialTrustRegionRadius_;
+ /** \brief The initial trust-region radius in the maximum-norm */
+ double initialTrustRegionRadius_;
- /** \brief Trust-region norm scaling */
- Dune::FieldVector<double,blocksize> scaling_;
+ /** \brief Trust-region norm scaling */
+ Dune::FieldVector<double,blocksize> scaling_;
- /** \brief Maximum number of trust-region steps */
- std::size_t maxTrustRegionSteps_;
+ /** \brief Maximum number of trust-region steps */
+ std::size_t maxTrustRegionSteps_;
- /** \brief Maximum number of multigrid iterations */
- int innerIterations_;
+ /** \brief Maximum number of multigrid iterations */
+ int innerIterations_;
- /** \brief Error tolerance of the multigrid QP solver */
- double innerTolerance_;
+ /** \brief Error tolerance of the multigrid QP solver */
+ double innerTolerance_;
- /** \brief Hessian matrix */
- std::unique_ptr<MatrixType> hessianMatrix_;
+ /** \brief Hessian matrix */
+ std::unique_ptr<MatrixType> hessianMatrix_;
- /** \brief The assembler for the material law */
- const Assembler* assembler_;
+ /** \brief The assembler for the material law */
+ const Assembler* assembler_;
- /** \brief The solver for the quadratic inner problems */
- std::shared_ptr<Solver> innerSolver_;
+ /** \brief The solver for the quadratic inner problems */
+ std::shared_ptr<Solver> innerSolver_;
- /** \brief Contains 'true' everywhere -- the trust-region is bounded */
- Dune::BitSetVector<blocksize> hasObstacle_;
+ /** \brief Contains 'true' everywhere -- the trust-region is bounded */
+ Dune::BitSetVector<blocksize> hasObstacle_;
- /** \brief The Dirichlet nodes */
- const Dune::BitSetVector<blocksize>* ignoreNodes_;
+ /** \brief The Dirichlet nodes */
+ const Dune::BitSetVector<blocksize>* ignoreNodes_;
- /** \brief The norm used to measure multigrid convergence */
- std::shared_ptr<H1SemiNorm<CorrectionType> > h1SemiNorm_;
+ /** \brief The norm used to measure multigrid convergence */
+ std::shared_ptr<H1SemiNorm<CorrectionType> > h1SemiNorm_;
- /** \brief An L2-norm, really. The H1SemiNorm class is badly named */
- std::shared_ptr<H1SemiNorm<CorrectionType> > l2Norm_;
+ /** \brief An L2-norm, really. The H1SemiNorm class is badly named */
+ std::shared_ptr<H1SemiNorm<CorrectionType> > l2Norm_;
- /** \brief If set to true we log convergence speed and other stuff */
- bool instrumented_;
+ /** \brief If set to true we log convergence speed and other stuff */
+ bool instrumented_;
- /** \brief Norm type used for stopping criterion (default is infinity norm) */
- enum class ErrorNormType {infinity, H1semi} normType_ = ErrorNormType::infinity;
+ /** \brief Norm type used for stopping criterion (default is infinity norm) */
+ enum class ErrorNormType {infinity, H1semi} normType_ = ErrorNormType::infinity;
- /** \brief Store information about solver runs for unit testing */
- Statistics statistics_;
+ /** \brief Store information about solver runs for unit testing */
+ Statistics statistics_;
};
diff --git a/dune/gfe/rodfactory.hh b/dune/gfe/rodfactory.hh
index 94e06e45..933fefee 100644
--- a/dune/gfe/rodfactory.hh
+++ b/dune/gfe/rodfactory.hh
@@ -19,23 +19,23 @@
template <class GridView>
class RodFactory
{
- static_assert(GridView::dimensionworld==1, "RodFactory is only implemented for grids in a 1d world");
+ static_assert(GridView::dimensionworld==1, "RodFactory is only implemented for grids in a 1d world");
public:
- RodFactory(const GridView& gridView)
+ RodFactory(const GridView& gridView)
: gridView_(gridView)
- {}
+ {}
-/** \brief Make a straight, unsheared rod from two given endpoints
+ /** \brief Make a straight, unsheared rod from two given endpoints
-\param[out] rod The new rod
-\param[in] n The number of vertices
-*/
-template <int dim>
- void create(std::vector<RigidBodyMotion<double,dim> >& rod,
- const Dune::FieldVector<double,3>& beginning, const Dune::FieldVector<double,3>& end)
-{
+ \param[out] rod The new rod
+ \param[in] n The number of vertices
+ */
+ template <int dim>
+ void create(std::vector<RigidBodyMotion<double,dim> >& rod,
+ const Dune::FieldVector<double,3>& beginning, const Dune::FieldVector<double,3>& end)
+ {
// Compute the correct orientation
Rotation<double,dim> orientation = Rotation<double,dim>::identity();
@@ -43,7 +43,7 @@ template <int dim>
zAxis[2] = 1;
Dune::FieldVector<double,3> axis = MatrixVector::crossProduct(Dune::FieldVector<double,3>(end-beginning), zAxis);
if (axis.two_norm() != 0)
- axis /= -axis.two_norm();
+ axis /= -axis.two_norm();
Dune::FieldVector<double,3> d3 = end-beginning;
d3 /= d3.two_norm();
@@ -51,22 +51,22 @@ template <int dim>
double angle = std::acos(zAxis * d3);
if (angle != 0)
- orientation = Rotation<double,3>(axis, angle);
+ orientation = Rotation<double,3>(axis, angle);
- // Set the values
- create(rod, RigidBodyMotion<double,dim>(beginning,orientation), RigidBodyMotion<double,dim>(end,orientation));
-}
+ // Set the values
+ create(rod, RigidBodyMotion<double,dim>(beginning,orientation), RigidBodyMotion<double,dim>(end,orientation));
+ }
-/** \brief Make a rod by interpolating between two end configurations
+ /** \brief Make a rod by interpolating between two end configurations
-\param[out] rod The new rod
-*/
- template <int spaceDim>
- void create(std::vector<RigidBodyMotion<double,spaceDim> >& rod,
- const RigidBodyMotion<double,spaceDim>& beginning,
- const RigidBodyMotion<double,spaceDim>& end)
-{
+ \param[out] rod The new rod
+ */
+ template <int spaceDim>
+ void create(std::vector<RigidBodyMotion<double,spaceDim> >& rod,
+ const RigidBodyMotion<double,spaceDim>& beginning,
+ const RigidBodyMotion<double,spaceDim>& end)
+ {
static const int dim = GridView::dimension; // de facto: 1
@@ -81,8 +81,8 @@ template <int dim>
double max = -std::numeric_limits<double>::max();
for (; vIt != vEndIt; ++vIt) {
- min = std::min(min, vIt->geometry().corner(0)[0]);
- max = std::max(max, vIt->geometry().corner(0)[0]);
+ min = std::min(min, vIt->geometry().corner(0)[0]);
+ max = std::max(max, vIt->geometry().corner(0)[0]);
}
////////////////////////////////////////////////////////////////////////////////////
@@ -92,105 +92,105 @@ template <int dim>
rod.resize(gridView_.size(dim));
for (vIt = gridView_.template begin<dim>(); vIt != vEndIt; ++vIt) {
- int idx = gridView_.indexSet().index(*vIt);
- Dune::FieldVector<double,1> local = (vIt->geometry().corner(0)[0] - min) / (max - min);
+ int idx = gridView_.indexSet().index(*vIt);
+ Dune::FieldVector<double,1> local = (vIt->geometry().corner(0)[0] - min) / (max - min);
- for (int i=0; i<3; i++)
- rod[idx].r[i] = (1-local)*beginning.r[i] + local*end.r[i];
- rod[idx].q = Rotation<double,3>::interpolate(beginning.q, end.q, local);
- }
-}
-
- /** \brief Make a rod by setting each entry to the same value
-
- \param[out] rod The new rod
- */
- template <int spaceDim>
- void create(std::vector<RigidBodyMotion<double,spaceDim> >& rod,
- const RigidBodyMotion<double,spaceDim>& value)
- {
- rod.resize(gridView_.size(1));
- std::fill(rod.begin(), rod.end(), value);
+ for (int i=0; i<3; i++)
+ rod[idx].r[i] = (1-local)*beginning.r[i] + local*end.r[i];
+ rod[idx].q = Rotation<double,3>::interpolate(beginning.q, end.q, local);
}
+ }
+
+ /** \brief Make a rod by setting each entry to the same value
+
+ \param[out] rod The new rod
+ */
+ template <int spaceDim>
+ void create(std::vector<RigidBodyMotion<double,spaceDim> >& rod,
+ const RigidBodyMotion<double,spaceDim>& value)
+ {
+ rod.resize(gridView_.size(1));
+ std::fill(rod.begin(), rod.end(), value);
+ }
+
+ /** \brief Make a rod by linearly interpolating between the end values
+
+ \note The end values are expected to be in the input container!
+ \param[in,out] rod The new rod
+ */
+ template <int spaceDim>
+ void create(std::vector<RigidBodyMotion<double,spaceDim> >& rod)
+ {
+ static const int dim = GridView::dimension; // de facto: 1
+ assert(gridView_.size(dim)==rod.size());
+
+ //////////////////////////////////////////////////////////////////////////////////////////////
+ // Get smallest and largest coordinate, in order to create an arc-length parametrization
+ //////////////////////////////////////////////////////////////////////////////////////////////
+
+ typename GridView::template Codim<dim>::Iterator vIt = gridView_.template begin<dim>();
+ typename GridView::template Codim<dim>::Iterator vEndIt = gridView_.template end<dim>();
- /** \brief Make a rod by linearly interpolating between the end values
-
- \note The end values are expected to be in the input container!
- \param[in,out] rod The new rod
- */
- template <int spaceDim>
- void create(std::vector<RigidBodyMotion<double,spaceDim> >& rod)
- {
- static const int dim = GridView::dimension; // de facto: 1
- assert(gridView_.size(dim)==rod.size());
-
- //////////////////////////////////////////////////////////////////////////////////////////////
- // Get smallest and largest coordinate, in order to create an arc-length parametrization
- //////////////////////////////////////////////////////////////////////////////////////////////
-
- typename GridView::template Codim<dim>::Iterator vIt = gridView_.template begin<dim>();
- typename GridView::template Codim<dim>::Iterator vEndIt = gridView_.template end<dim>();
-
- double min = std::numeric_limits<double>::max();
- double max = -std::numeric_limits<double>::max();
- RigidBodyMotion<double,spaceDim> beginning, end;
-
- for (; vIt != vEndIt; ++vIt) {
- if (vIt->geometry().corner(0)[0] < min) {
- min = vIt->geometry().corner(0)[0];
- beginning = rod[gridView_.indexSet().index(*vIt)];
- }
- if (vIt->geometry().corner(0)[0] > max) {
- max = vIt->geometry().corner(0)[0];
- end = rod[gridView_.indexSet().index(*vIt)];
- }
- }
-
- ////////////////////////////////////////////////////////////////////////////////////
- // Interpolate according to arc-length
- ////////////////////////////////////////////////////////////////////////////////////
-
- rod.resize(gridView_.size(dim));
-
- for (vIt = gridView_.template begin<dim>(); vIt != vEndIt; ++vIt) {
- int idx = gridView_.indexSet().index(*vIt);
- Dune::FieldVector<double,1> local = (vIt->geometry().corner(0)[0] - min) / (max - min);
-
- for (int i=0; i<3; i++)
- rod[idx].r[i] = (1-local)*beginning.r[i] + local*end.r[i];
- rod[idx].q = Rotation<double,3>::interpolate(beginning.q, end.q, local);
- }
+ double min = std::numeric_limits<double>::max();
+ double max = -std::numeric_limits<double>::max();
+ RigidBodyMotion<double,spaceDim> beginning, end;
+
+ for (; vIt != vEndIt; ++vIt) {
+ if (vIt->geometry().corner(0)[0] < min) {
+ min = vIt->geometry().corner(0)[0];
+ beginning = rod[gridView_.indexSet().index(*vIt)];
+ }
+ if (vIt->geometry().corner(0)[0] > max) {
+ max = vIt->geometry().corner(0)[0];
+ end = rod[gridView_.indexSet().index(*vIt)];
+ }
}
+ ////////////////////////////////////////////////////////////////////////////////////
+ // Interpolate according to arc-length
+ ////////////////////////////////////////////////////////////////////////////////////
-/** \brief Make a rod solving a static Dirichlet problem
+ rod.resize(gridView_.size(dim));
- \param rod The configuration to be computed
- \param radius The rod's radius
- \param E The rod's elastic modulus
- \param nu The rod's Poission modulus
- \param beginning The prescribed Dirichlet values
- \param end The prescribed Dirichlet values
- \param[out] rod The new rod
- */
-template <int spaceDim>
-void create(std::vector<RigidBodyMotion<double,spaceDim> >& rod,
- double radius, double E, double nu,
- const RigidBodyMotion<double,spaceDim>& beginning,
- const RigidBodyMotion<double,spaceDim>& end)
-{
+ for (vIt = gridView_.template begin<dim>(); vIt != vEndIt; ++vIt) {
+ int idx = gridView_.indexSet().index(*vIt);
+ Dune::FieldVector<double,1> local = (vIt->geometry().corner(0)[0] - min) / (max - min);
+
+ for (int i=0; i<3; i++)
+ rod[idx].r[i] = (1-local)*beginning.r[i] + local*end.r[i];
+ rod[idx].q = Rotation<double,3>::interpolate(beginning.q, end.q, local);
+ }
+ }
+
+
+ /** \brief Make a rod solving a static Dirichlet problem
+
+ \param rod The configuration to be computed
+ \param radius The rod's radius
+ \param E The rod's elastic modulus
+ \param nu The rod's Poission modulus
+ \param beginning The prescribed Dirichlet values
+ \param end The prescribed Dirichlet values
+ \param[out] rod The new rod
+ */
+ template <int spaceDim>
+ void create(std::vector<RigidBodyMotion<double,spaceDim> >& rod,
+ double radius, double E, double nu,
+ const RigidBodyMotion<double,spaceDim>& beginning,
+ const RigidBodyMotion<double,spaceDim>& end)
+ {
// Make Dirichlet bitfields for the rods as well
Dune::BitSetVector<6> rodDirichletNodes(gridView_.size(GridView::dimension),false);
for (int j=0; j<6; j++) {
- rodDirichletNodes[0][j] = true;
- rodDirichletNodes.back()[j] = true;
+ rodDirichletNodes[0][j] = true;
+ rodDirichletNodes.back()[j] = true;
}
// Create local assembler for the static elastic problem
RodLocalStiffness<GridView,double> rodLocalStiffness(gridView_, radius*radius*M_PI,
- std::pow(radius,4) * 0.25* M_PI, std::pow(radius,4) * 0.25* M_PI, E, nu);
+ std::pow(radius,4) * 0.25* M_PI, std::pow(radius,4) * 0.25* M_PI, E, nu);
typedef Dune::Functions::PQKNodalBasis<GridView,1> RodP1Basis;
RodP1Basis p1Basis(gridView_);
@@ -209,11 +209,11 @@ void create(std::vector<RigidBodyMotion<double,spaceDim> >& rod,
// Trust--Region solver
RiemannianTrustRegionSolver<RodP1Basis, RigidBodyMotion<double,spaceDim> > rodSolver;
rodSolver.setup(gridView_.grid(), &assembler, rod,
- rodDirichletNodes,
- 1e-10, 100, // TR tolerance and iterations
- 20, // init TR radius
- 200, 1e-00, 1, 3, 3, // Multigrid parameters
- 100, 1e-8 , false); // base solver parameters
+ rodDirichletNodes,
+ 1e-10, 100, // TR tolerance and iterations
+ 20, // init TR radius
+ 200, 1e-00, 1, 3, 3, // Multigrid parameters
+ 100, 1e-8 , false); // base solver parameters
rodSolver.verbosity_ = NumProc::QUIET;
@@ -222,11 +222,11 @@ void create(std::vector<RigidBodyMotion<double,spaceDim> >& rod,
rod = rodSolver.getSol();
-}
+ }
private:
- const GridView gridView_;
+ const GridView gridView_;
};
#endif
diff --git a/dune/gfe/skewmatrix.hh b/dune/gfe/skewmatrix.hh
index b194759f..c45484b5 100644
--- a/dune/gfe/skewmatrix.hh
+++ b/dune/gfe/skewmatrix.hh
@@ -11,91 +11,91 @@ class SkewMatrix
template <class T>
class SkewMatrix<T,3>
{
-
+
public:
-
- /** \brief Default constructor -- does nothing */
- SkewMatrix()
- {}
-
- /** \brief Constructor from an axial vector */
- explicit SkewMatrix(const Dune::FieldVector<T,3>& v)
+
+ /** \brief Default constructor -- does nothing */
+ SkewMatrix()
+ {}
+
+ /** \brief Constructor from an axial vector */
+ explicit SkewMatrix(const Dune::FieldVector<T,3>& v)
: data_(v)
- {}
-
- /** \brief Constructor from a general matrix */
- explicit SkewMatrix(const Dune::FieldMatrix<T,3,3>& m)
- {
- data_ = {m[2][1], m[0][2], m[1][0]};
- }
-
- SkewMatrix(T v)
+ {}
+
+ /** \brief Constructor from a general matrix */
+ explicit SkewMatrix(const Dune::FieldMatrix<T,3,3>& m)
+ {
+ data_ = {m[2][1], m[0][2], m[1][0]};
+ }
+
+ SkewMatrix(T v)
: data_(v)
- {}
-
- SkewMatrix<T,3>& operator*=(const T& a)
- {
- data_ *= a;
- return *this;
- }
-
- Dune::FieldVector<T,3>& axial()
- {
- return data_;
- }
-
- const Dune::FieldVector<T,3>& axial() const
- {
- return data_;
- }
-
- typedef typename Dune::FieldVector<T,3>::Iterator Iterator;
-
- //! begin iterator
- Iterator begin ()
- {
- return Iterator(data_,0);
- }
-
- //! end iterator
- Iterator end ()
- {
- return Iterator(data_,3);
- }
-
- typedef typename Dune::FieldVector<T,3>::ConstIterator ConstIterator;
- //! begin iterator
- ConstIterator begin () const
- {
- return ConstIterator(data_,0);
- }
-
- //! end iterator
- ConstIterator end () const
- {
- return ConstIterator(data_,3);
- }
-
- /** \brief Embed the skew-symmetric matrix in R^3x3 */
- Dune::FieldMatrix<T,3,3> toMatrix() const
- {
- Dune::FieldMatrix<T,3,3> mat;
- mat = 0;
-
- mat[0][1] = -data_[2];
- mat[1][0] = data_[2];
- mat[0][2] = data_[1];
- mat[2][0] = -data_[1];
- mat[1][2] = -data_[0];
- mat[2][1] = data_[0];
-
- return mat;
- }
-
+ {}
+
+ SkewMatrix<T,3>& operator*=(const T& a)
+ {
+ data_ *= a;
+ return *this;
+ }
+
+ Dune::FieldVector<T,3>& axial()
+ {
+ return data_;
+ }
+
+ const Dune::FieldVector<T,3>& axial() const
+ {
+ return data_;
+ }
+
+ typedef typename Dune::FieldVector<T,3>::Iterator Iterator;
+
+ //! begin iterator
+ Iterator begin ()
+ {
+ return Iterator(data_,0);
+ }
+
+ //! end iterator
+ Iterator end ()
+ {
+ return Iterator(data_,3);
+ }
+
+ typedef typename Dune::FieldVector<T,3>::ConstIterator ConstIterator;
+ //! begin iterator
+ ConstIterator begin () const
+ {
+ return ConstIterator(data_,0);
+ }
+
+ //! end iterator
+ ConstIterator end () const
+ {
+ return ConstIterator(data_,3);
+ }
+
+ /** \brief Embed the skew-symmetric matrix in R^3x3 */
+ Dune::FieldMatrix<T,3,3> toMatrix() const
+ {
+ Dune::FieldMatrix<T,3,3> mat;
+ mat = 0;
+
+ mat[0][1] = -data_[2];
+ mat[1][0] = data_[2];
+ mat[0][2] = data_[1];
+ mat[2][0] = -data_[1];
+ mat[1][2] = -data_[0];
+ mat[2][1] = data_[0];
+
+ return mat;
+ }
+
private:
- // we store the axial vector
- Dune::FieldVector<T,3> data_;
-
+ // we store the axial vector
+ Dune::FieldVector<T,3> data_;
+
};
#endif
diff --git a/dune/gfe/spaces/hyperbolichalfspacepoint.hh b/dune/gfe/spaces/hyperbolichalfspacepoint.hh
index 2a8f6b20..e4b21e6a 100644
--- a/dune/gfe/spaces/hyperbolichalfspacepoint.hh
+++ b/dune/gfe/spaces/hyperbolichalfspacepoint.hh
@@ -13,540 +13,540 @@
\tparam N Dimension of the hyperbolic half-space
\tparam T The type used for individual coordinates
-*/
+ */
template <class T, int N>
class HyperbolicHalfspacePoint
{
- static_assert(N>=2, "A hyperbolic half-space needs to be at least two-dimensional!");
-
- /** \brief Compute the derivative of arccosh^2 without getting unstable for x close to 1 */
- static T derivativeOfArcCosHSquared(const T& x) {
- const T eps = 1e-4;
- if (x < 1+eps) { // regular expression is unstable, use the series expansion instead
- return 2 - 2*(x-1)/3 + 4/15*(x-1)*(x-1);
- } else
- return 2*std::acosh(x) / std::sqrt(x*x-1);
+ static_assert(N>=2, "A hyperbolic half-space needs to be at least two-dimensional!");
+
+ /** \brief Compute the derivative of arccosh^2 without getting unstable for x close to 1 */
+ static T derivativeOfArcCosHSquared(const T& x) {
+ const T eps = 1e-4;
+ if (x < 1+eps) { // regular expression is unstable, use the series expansion instead
+ return 2 - 2*(x-1)/3 + 4/15*(x-1)*(x-1);
+ } else
+ return 2*std::acosh(x) / std::sqrt(x*x-1);
+ }
+
+ /** \brief Compute the second derivative of arccosh^2 without getting unstable for x close to 1 */
+ static T secondDerivativeOfArcCosHSquared(const T& x) {
+ const T eps = 1e-4;
+ if (x < 1+eps) { // regular expression is unstable, use the series expansion instead
+ return -2.0/3 + 8*(x-1)/15;
+ } else
+ return 2/(x*x-1) - 2*x*std::acosh(x) / std::pow(x*x-1,1.5);
+ }
+
+ /** \brief Compute the third derivative of arccos^2 without getting unstable for x close to 1 */
+ static T thirdDerivativeOfArcCosHSquared(const T& x) {
+ const T eps = 1e-4;
+ if (x < 1+eps) { // regular expression is unstable, use the series expansion instead
+ return 8.0/15 - 24*(x-1)/35;
+ } else {
+ T d = x*x-1;
+ return -6*x/(d*d) + (4*x*x+2)*std::acosh(x)/(std::pow(d,2.5));
}
+ }
- /** \brief Compute the second derivative of arccosh^2 without getting unstable for x close to 1 */
- static T secondDerivativeOfArcCosHSquared(const T& x) {
- const T eps = 1e-4;
- if (x < 1+eps) { // regular expression is unstable, use the series expansion instead
- return -2.0/3 + 8*(x-1)/15;
- } else
- return 2/(x*x-1) - 2*x*std::acosh(x) / std::pow(x*x-1,1.5);
- }
+ /** \brief Compute derivative of $F(p,q) = 1 + ||p-q||^2 / 2p_nq_n with respect to p
+ \param[in] diffNormSquared Expected to be ||p-q||^2, taken from the caller for efficiency reasons
+ */
+ static Dune::FieldVector<T,N> computeDFdp(const HyperbolicHalfspacePoint& p, const HyperbolicHalfspacePoint& q, const T& diffNormSquared)
+ {
+ Dune::FieldVector<T,N> result;
- /** \brief Compute the third derivative of arccos^2 without getting unstable for x close to 1 */
- static T thirdDerivativeOfArcCosHSquared(const T& x) {
- const T eps = 1e-4;
- if (x < 1+eps) { // regular expression is unstable, use the series expansion instead
- return 8.0/15 - 24*(x-1)/35;
- } else {
- T d = x*x-1;
- return -6*x/(d*d) + (4*x*x+2)*std::acosh(x)/(std::pow(d,2.5));
- }
- }
+ for (size_t i=0; i<N-1; i++)
+ result[i] = ( p.data_[i] - q.data_[i] ) / (q.data_[N-1] * p.data_[N-1]);
- /** \brief Compute derivative of $F(p,q) = 1 + ||p-q||^2 / 2p_nq_n with respect to p
- \param[in] diffNormSquared Expected to be ||p-q||^2, taken from the caller for efficiency reasons
- */
- static Dune::FieldVector<T,N> computeDFdp(const HyperbolicHalfspacePoint& p, const HyperbolicHalfspacePoint& q, const T& diffNormSquared)
- {
- Dune::FieldVector<T,N> result;
-
- for (size_t i=0; i<N-1; i++)
- result[i] = ( p.data_[i] - q.data_[i] ) / (q.data_[N-1] * p.data_[N-1]);
-
- result[N-1] = - diffNormSquared / (2*p.data_[N-1]*p.data_[N-1]*q.data_[N-1]) + (p.data_[N-1] - q.data_[N-1]) / (p.data_[N-1]*q.data_[N-1]);
-
- return result;
- }
-
- /** \brief Compute derivative of $F(p,q) = 1 + ||p-q||^2 / 2p_nq_n with respect to q
+ result[N-1] = - diffNormSquared / (2*p.data_[N-1]*p.data_[N-1]*q.data_[N-1]) + (p.data_[N-1] - q.data_[N-1]) / (p.data_[N-1]*q.data_[N-1]);
+
+ return result;
+ }
+
+ /** \brief Compute derivative of $F(p,q) = 1 + ||p-q||^2 / 2p_nq_n with respect to q
\param[in] diffNormSquared Expected to be ||p-q||^2, taken from the caller for efficiency reasons
- */
- static Dune::FieldVector<T,N> computeDFdq(const HyperbolicHalfspacePoint& p, const HyperbolicHalfspacePoint& q, const T& diffNormSquared)
- {
- Dune::FieldVector<T,N> result;
-
- for (size_t i=0; i<N-1; i++)
- result[i] = ( q.data_[i] - p.data_[i] ) / (q.data_[N-1] * p.data_[N-1]);
-
- result[N-1] = - diffNormSquared / (2*p.data_[N-1]*q.data_[N-1]*q.data_[N-1]) - (p.data_[N-1] - q.data_[N-1]) / (p.data_[N-1]*q.data_[N-1]);
-
- return result;
- }
-
- /** \brief Compute second derivative of $F(p,q) = 1 + ||p-q||^2 / 2p_nq_n with respect to p and q
+ */
+ static Dune::FieldVector<T,N> computeDFdq(const HyperbolicHalfspacePoint& p, const HyperbolicHalfspacePoint& q, const T& diffNormSquared)
+ {
+ Dune::FieldVector<T,N> result;
+
+ for (size_t i=0; i<N-1; i++)
+ result[i] = ( q.data_[i] - p.data_[i] ) / (q.data_[N-1] * p.data_[N-1]);
+
+ result[N-1] = - diffNormSquared / (2*p.data_[N-1]*q.data_[N-1]*q.data_[N-1]) - (p.data_[N-1] - q.data_[N-1]) / (p.data_[N-1]*q.data_[N-1]);
+
+ return result;
+ }
+
+ /** \brief Compute second derivative of $F(p,q) = 1 + ||p-q||^2 / 2p_nq_n with respect to p and q
\param[in] diffNormSquared Expected to be ||p-q||^2, taken from the caller for efficiency reasons
- */
- static Dune::FieldMatrix<T,N,N> computeDFdpdq(const HyperbolicHalfspacePoint& a, const HyperbolicHalfspacePoint& b, const T& diffNormSquared)
- {
- // abbreviate notation
- const Dune::FieldVector<T,N>& p = a.data_;
- const Dune::FieldVector<T,N>& q = b.data_;
-
- Dune::FieldMatrix<T,N,N> dFdpdq;
-
- for (size_t i=0; i<N; i++) {
-
- for (size_t j=0; j<N; j++) {
-
- if (i!=N-1 and j!=N-1) {
-
- dFdpdq[i][j] = -(i==j) / (p[N-1]*q[N-1]);
-
- } else if (i!=N-1 and j==N-1) {
-
- dFdpdq[i][j] = -(p[i] - q[i]) / (p[N-1]*q[N-1]*q[N-1]);
-
- } else if (i==N-1 and j!=N-1) {
-
- dFdpdq[i][j] = (p[j] - q[j]) / (p[N-1]*p[N-1]*q[N-1]);
-
- } else if (i==N-1 and j==N-1) {
-
- dFdpdq[i][j] = -1/(p[N-1]*q[N-1])
- - (p[N-1]-q[N-1]) / (p[N-1]*q[N-1]*q[N-1])
- + (p[N-1]-q[N-1]) / (p[N-1]*p[N-1]*q[N-1]) + diffNormSquared / (2*p[N-1]*p[N-1]*q[N-1]*q[N-1]);
-
- }
-
- }
-
+ */
+ static Dune::FieldMatrix<T,N,N> computeDFdpdq(const HyperbolicHalfspacePoint& a, const HyperbolicHalfspacePoint& b, const T& diffNormSquared)
+ {
+ // abbreviate notation
+ const Dune::FieldVector<T,N>& p = a.data_;
+ const Dune::FieldVector<T,N>& q = b.data_;
+
+ Dune::FieldMatrix<T,N,N> dFdpdq;
+
+ for (size_t i=0; i<N; i++) {
+
+ for (size_t j=0; j<N; j++) {
+
+ if (i!=N-1 and j!=N-1) {
+
+ dFdpdq[i][j] = -(i==j) / (p[N-1]*q[N-1]);
+
+ } else if (i!=N-1 and j==N-1) {
+
+ dFdpdq[i][j] = -(p[i] - q[i]) / (p[N-1]*q[N-1]*q[N-1]);
+
+ } else if (i==N-1 and j!=N-1) {
+
+ dFdpdq[i][j] = (p[j] - q[j]) / (p[N-1]*p[N-1]*q[N-1]);
+
+ } else if (i==N-1 and j==N-1) {
+
+ dFdpdq[i][j] = -1/(p[N-1]*q[N-1])
+ - (p[N-1]-q[N-1]) / (p[N-1]*q[N-1]*q[N-1])
+ + (p[N-1]-q[N-1]) / (p[N-1]*p[N-1]*q[N-1]) + diffNormSquared / (2*p[N-1]*p[N-1]*q[N-1]*q[N-1]);
+
}
- return dFdpdq;
+ }
+
}
-
- /** \brief Compute second derivative of $F(p,q) = 1 + ||p-q||^2 / 2p_nq_n with respect to q
+
+ return dFdpdq;
+ }
+
+ /** \brief Compute second derivative of $F(p,q) = 1 + ||p-q||^2 / 2p_nq_n with respect to q
\param[in] diffNormSquared Expected to be ||p-q||^2, taken from the caller for efficiency reasons
- */
- static Dune::FieldMatrix<T,N,N> computeDFdqdq(const HyperbolicHalfspacePoint& a, const HyperbolicHalfspacePoint& b, const T& diffNormSquared)
- {
- // abbreviate notation
- const Dune::FieldVector<T,N>& p = a.data_;
- const Dune::FieldVector<T,N>& q = b.data_;
-
- Dune::FieldMatrix<T,N,N> dFdqdq;
-
- for (size_t i=0; i<N; i++) {
-
- for (size_t j=0; j<N; j++) {
-
- if (i!=N-1 and j!=N-1) {
-
- dFdqdq[i][j] = (i==j) / (p[N-1]*q[N-1]);
-
- } else if (i!=N-1 and j==N-1) {
-
- dFdqdq[i][j] = (p[i] - q[i]) / (p[N-1]*q[N-1]*q[N-1]);
-
- } else if (i==N-1 and j!=N-1) {
-
- dFdqdq[i][j] = (p[j] - q[j]) / (p[N-1]*q[N-1]*q[N-1]);
-
- } else if (i==N-1 and j==N-1) {
-
- dFdqdq[i][j] = 1/(q[N-1]*q[N-1]) + (p[N-1]-q[N-1]) / (p[N-1]*q[N-1]*q[N-1]) + diffNormSquared / (p[N-1]*q[N-1]*q[N-1]*q[N-1]);
-
- }
-
- }
-
+ */
+ static Dune::FieldMatrix<T,N,N> computeDFdqdq(const HyperbolicHalfspacePoint& a, const HyperbolicHalfspacePoint& b, const T& diffNormSquared)
+ {
+ // abbreviate notation
+ const Dune::FieldVector<T,N>& p = a.data_;
+ const Dune::FieldVector<T,N>& q = b.data_;
+
+ Dune::FieldMatrix<T,N,N> dFdqdq;
+
+ for (size_t i=0; i<N; i++) {
+
+ for (size_t j=0; j<N; j++) {
+
+ if (i!=N-1 and j!=N-1) {
+
+ dFdqdq[i][j] = (i==j) / (p[N-1]*q[N-1]);
+
+ } else if (i!=N-1 and j==N-1) {
+
+ dFdqdq[i][j] = (p[i] - q[i]) / (p[N-1]*q[N-1]*q[N-1]);
+
+ } else if (i==N-1 and j!=N-1) {
+
+ dFdqdq[i][j] = (p[j] - q[j]) / (p[N-1]*q[N-1]*q[N-1]);
+
+ } else if (i==N-1 and j==N-1) {
+
+ dFdqdq[i][j] = 1/(q[N-1]*q[N-1]) + (p[N-1]-q[N-1]) / (p[N-1]*q[N-1]*q[N-1]) + diffNormSquared / (p[N-1]*q[N-1]*q[N-1]*q[N-1]);
+
}
- return dFdqdq;
+ }
+
}
-
-
-
+
+ return dFdqdq;
+ }
+
+
+
public:
- /** \brief The type used for coordinates */
- typedef T ctype;
-
- /** \brief The type used for global coordinates */
- typedef Dune::FieldVector<T,N> CoordinateType;
-
- /** \brief Dimension of the manifold */
- static const int dim = N;
-
- /** \brief Dimension of the Euclidean space the manifold is embedded in */
- static const int embeddedDim = N;
-
- /** \brief Type of a tangent vector in local coordinates */
- typedef Dune::FieldVector<T,N> TangentVector;
-
- /** \brief Type of a tangent vector in the embedding space */
- typedef Dune::FieldVector<T,N> EmbeddedTangentVector;
-
- /** \brief The global convexity radius of the hyberbolic plane */
- static constexpr T convexityRadius = std::numeric_limits<T>::infinity();
-
- /** \brief Default constructor */
- HyperbolicHalfspacePoint()
- {}
-
- /** \brief Constructor from a vector. The vector gets normalized */
- HyperbolicHalfspacePoint(const Dune::FieldVector<T,N>& vector)
- : data_(vector)
- {
- assert(vector[N-1]>0);
- }
-
- /** \brief Constructor from an array. The array gets normalized */
- HyperbolicHalfspacePoint(const std::array<T,N>& vector)
- {
- assert(vector.back()>0);
- for (int i=0; i<N; i++)
- data_[i] = vector[i];
- }
+ /** \brief The type used for coordinates */
+ typedef T ctype;
- /** \brief The exponential map */
- static HyperbolicHalfspacePoint exp(const HyperbolicHalfspacePoint& p, const TangentVector& v) {
-
- assert (N==2);
-
- T vNorm = v.two_norm();
-
- // we compute geodesics by applying an isometry to a fixed unit-speed geodesic.
- // Hence we need a unit velocity vector.
- if (vNorm <= 0)
- return p;
-
- TangentVector vUnit = v;
- vUnit /= vNorm;
-
- // Compute the coefficients a,b,c,d of the Moebius transform that transforms
- // the unit speed upward geodesic to the one through p with direction vUnit.
- // We expect the Moebius transform to be an isometry, i.e. ad-bc = 1.
- T cc = 1/(2*p.data_[N-1]) - vUnit[N-1] / (2*p.data_[N-1]*p.data_[N-1]);
- T dd = 1/(2*p.data_[N-1]) + vUnit[N-1] / (2*p.data_[N-1]*p.data_[N-1]);
- T ac = vUnit[0] / (2*p.data_[N-1]) + p.data_[0]*cc;
- T bd = p.data_[0] / p.data_[N-1] - ac;
-
- HyperbolicHalfspacePoint result;
-
- // vertical part
- result.data_[1] = std::exp(vNorm) / (cc*std::exp(2*vNorm) + dd);
-
- // horizontal part
- result.data_[0] = (ac*std::exp(2*vNorm) + bd) / (cc*std::exp(2*vNorm) + dd);
-
- return result;
- }
+ /** \brief The type used for global coordinates */
+ typedef Dune::FieldVector<T,N> CoordinateType;
- /** \brief Hyperbolic distance between two points
- *
- * \f dist(a,b) = arccosh ( 1 + ||a-b||^2 / (2a_n b_n) \f
- */
- static T distance(const HyperbolicHalfspacePoint& a, const HyperbolicHalfspacePoint& b) {
-
- T result(0);
-
- for (size_t i=0; i<N; i++)
- result += (a.data_[i]-b.data_[i])*(a.data_[i]-b.data_[i]);
-
- return std::acosh(1 + result / (2*a.data_[N-1]*b.data_[N-1]));
- }
+ /** \brief Dimension of the manifold */
+ static const int dim = N;
- /** \brief Compute the gradient of the squared distance function keeping the first argument fixed
+ /** \brief Dimension of the Euclidean space the manifold is embedded in */
+ static const int embeddedDim = N;
- Unlike the distance itself the squared distance is differentiable at zero
- */
- static EmbeddedTangentVector derivativeOfDistanceSquaredWRTSecondArgument(const HyperbolicHalfspacePoint& a, const HyperbolicHalfspacePoint& b) {
-
- T diffNormSquared(0);
-
- for (size_t i=0; i<N; i++)
- diffNormSquared += (a.data_[i]-b.data_[i])*(a.data_[i]-b.data_[i]);
+ /** \brief Type of a tangent vector in local coordinates */
+ typedef Dune::FieldVector<T,N> TangentVector;
- TangentVector result = computeDFdq(a,b,diffNormSquared);
-
- T x = 1 + diffNormSquared/ (2*a.data_[N-1]*b.data_[N-1]);
-
- result *= derivativeOfArcCosHSquared(x);
+ /** \brief Type of a tangent vector in the embedding space */
+ typedef Dune::FieldVector<T,N> EmbeddedTangentVector;
- return result;
- }
+ /** \brief The global convexity radius of the hyberbolic plane */
+ static constexpr T convexityRadius = std::numeric_limits<T>::infinity();
- /** \brief Compute the Hessian of the squared distance function keeping the first argument fixed
+ /** \brief Default constructor */
+ HyperbolicHalfspacePoint()
+ {}
- Unlike the distance itself the squared distance is differentiable at zero
- */
- static Dune::FieldMatrix<T,N,N> secondDerivativeOfDistanceSquaredWRTSecondArgument(const HyperbolicHalfspacePoint& a, const HyperbolicHalfspacePoint& b) {
+ /** \brief Constructor from a vector. The vector gets normalized */
+ HyperbolicHalfspacePoint(const Dune::FieldVector<T,N>& vector)
+ : data_(vector)
+ {
+ assert(vector[N-1]>0);
+ }
- T diffNormSquared = (a.data_-b.data_).two_norm2();
+ /** \brief Constructor from an array. The array gets normalized */
+ HyperbolicHalfspacePoint(const std::array<T,N>& vector)
+ {
+ assert(vector.back()>0);
+ for (int i=0; i<N; i++)
+ data_[i] = vector[i];
+ }
- // Compute first derivative of F
- Dune::FieldVector<T,N> dFdq = computeDFdq(a,b,diffNormSquared);
+ /** \brief The exponential map */
+ static HyperbolicHalfspacePoint exp(const HyperbolicHalfspacePoint& p, const TangentVector& v) {
- // Compute second derivatives of F
- Dune::FieldMatrix<T,N,N> dFdqdq = computeDFdqdq(a,b,diffNormSquared);
-
- //
- T x = 1 + diffNormSquared/ (2*a.data_[N-1]*b.data_[N-1]);
- T alphaPrime = derivativeOfArcCosHSquared(x);
- T alphaPrimePrime = secondDerivativeOfArcCosHSquared(x);
+ assert (N==2);
- // Sum it all together
- Dune::FieldMatrix<T,N,N> result;
- for (size_t i=0; i<N; i++)
- for (size_t j=0; j<N; j++)
- result[i][j] = alphaPrimePrime * dFdq[i] * dFdq[j] + alphaPrime * dFdqdq[i][j];
-
- return result;
- }
+ T vNorm = v.two_norm();
- /** \brief Compute the mixed second derivative \partial d^2 / \partial da db
-
- */
- static Dune::FieldMatrix<T,N,N> secondDerivativeOfDistanceSquaredWRTFirstAndSecondArgument(const HyperbolicHalfspacePoint& a, const HyperbolicHalfspacePoint& b)
- {
- // abbreviate notation
- const Dune::FieldVector<T,N>& p = a.data_;
- const Dune::FieldVector<T,N>& q = b.data_;
-
- T diffNormSquared = (p-q).two_norm2();
-
- // Compute first derivatives of F with respect to p and q
- Dune::FieldVector<T,N> dFdp = computeDFdp(a,b,diffNormSquared);
- Dune::FieldVector<T,N> dFdq = computeDFdq(a,b,diffNormSquared);
-
- // Compute second derivatives of F
- Dune::FieldMatrix<T,N,N> dFdpdq = computeDFdpdq(a,b,diffNormSquared);
-
- //
- T x = 1 + diffNormSquared/ (2*p[N-1]*q[N-1]);
- T alphaPrime = derivativeOfArcCosHSquared(x);
- T alphaPrimePrime = secondDerivativeOfArcCosHSquared(x);
-
- // Sum it all together
- Dune::FieldMatrix<T,N,N> result;
- for (size_t i=0; i<N; i++)
- for (size_t j=0; j<N; j++)
- result[i][j] = alphaPrimePrime * dFdp[i] * dFdq[j] + alphaPrime * dFdpdq[i][j];
-
- return result;
- }
-
-
- /** \brief Compute the third derivative \partial d^3 / \partial dq^3
-
- Unlike the distance itself the squared distance is differentiable at zero
- */
- static Tensor3<T,N,N,N> thirdDerivativeOfDistanceSquaredWRTSecondArgument(const HyperbolicHalfspacePoint& a, const HyperbolicHalfspacePoint& b)
- {
- Tensor3<T,N,N,N> result;
-
- // abbreviate notation
- const Dune::FieldVector<T,N>& p = a.data_;
- const Dune::FieldVector<T,N>& q = b.data_;
-
- T diffNormSquared = (p-q).two_norm2();
-
- // Compute first derivative of F
- Dune::FieldVector<T,N> dFdq = computeDFdq(a,b,diffNormSquared);
-
- // Compute second derivatives of F
- Dune::FieldMatrix<T,N,N> dFdqdq = computeDFdqdq(a,b,diffNormSquared);
-
- // Compute third derivatives of F
- Tensor3<T,N,N,N> dFdqdqdq;
-
- for (size_t i=0; i<N; i++) {
-
- for (size_t j=0; j<N; j++) {
-
- for (size_t k=0; k<N; k++) {
-
- if (i!=N-1 and j!=N-1 and k!=N-1) {
-
- dFdqdqdq[i][j][k] = 0;
-
- } else if (i!=N-1 and j!=N-1 and k==N-1) {
-
- dFdqdqdq[i][j][k] = -(i==j) / (p[N-1]*q[N-1]*q[N-1]);
-
- } else if (i!=N-1 and j==N-1 and k!=N-1) {
-
- dFdqdqdq[i][j][k] = -(i==k) / (p[N-1]*q[N-1]*q[N-1]);
-
- } else if (i!=N-1 and j==N-1 and k==N-1) {
-
- dFdqdqdq[i][j][k] = -2*(p[i] - q[i]) / (p[N-1]*Dune::power(q[N-1],3));
-
- } else if (i==N-1 and j!=N-1 and k!=N-1) {
-
- dFdqdqdq[i][j][k] = - (j==k) / (p[N-1]*q[N-1]*q[N-1]);
-
- } else if (i==N-1 and j!=N-1 and k==N-1) {
-
- dFdqdqdq[i][j][k] = -2*(p[j] - q[j]) / (p[N-1]*Dune::power(q[N-1],3));
-
- } else if (i==N-1 and j==N-1 and k!=N-1) {
-
- dFdqdqdq[i][j][k] = -2*(p[k] - q[k]) / (p[N-1]*Dune::power(q[N-1],3));
-
- } else if (i==N-1 and j==N-1 and k==N-1) {
-
- dFdqdqdq[i][j][k] = -2/Dune::power(q[N-1],3) - 1/(p[N-1]*q[N-1]*q[N-1]) - 4*(p[N-1]-q[N-1])/(p[N-1]*Dune::power(q[N-1],3))
- - 3*diffNormSquared / (p[N-1]*Dune::power(q[N-1],4));
-
- }
-
- }
-
- }
-
- }
+ // we compute geodesics by applying an isometry to a fixed unit-speed geodesic.
+ // Hence we need a unit velocity vector.
+ if (vNorm <= 0)
+ return p;
- //
- T x = 1 + diffNormSquared/ (2*p[N-1]*q[N-1]);
- T alphaPrime = derivativeOfArcCosHSquared(x);
- T alphaPrimePrime = secondDerivativeOfArcCosHSquared(x);
- T alphaPrimePrimePrime = thirdDerivativeOfArcCosHSquared(x);
-
- // Sum it all together
- for (size_t i=0; i<N; i++)
- for (size_t j=0; j<N; j++)
- for (size_t k=0; k<N; k++)
- result[i][j][k] = alphaPrimePrimePrime * dFdq[i] * dFdq[j] * dFdq[k]
- + alphaPrimePrime * (dFdqdq[i][j] * dFdq[k] + dFdqdq[i][k] * dFdq[j] + dFdqdq[j][k] * dFdq[i])
- + alphaPrime * dFdqdqdq[i][j][k];
-
- return result;
- }
-
- /** \brief Compute the mixed third derivative \partial d^3 / \partial da db^2
- */
- static Tensor3<T,N,N,N> thirdDerivativeOfDistanceSquaredWRTFirst1AndSecond2Argument(const HyperbolicHalfspacePoint& a, const HyperbolicHalfspacePoint& b)
- {
- Tensor3<T,N,N,N> result;
-
- // abbreviate notation
- const Dune::FieldVector<T,N>& p = a.data_;
- const Dune::FieldVector<T,N>& q = b.data_;
-
- T diffNormSquared = (p-q).two_norm2();
-
- // Compute first derivatives of F with respect to p and q
- Dune::FieldVector<T,N> dFdp = computeDFdp(a,b,diffNormSquared);
- Dune::FieldVector<T,N> dFdq = computeDFdq(a,b,diffNormSquared);
-
- // Compute second derivatives of F
- Dune::FieldMatrix<T,N,N> dFdqdq = computeDFdqdq(a,b,diffNormSquared);
-
- Dune::FieldMatrix<T,N,N> dFdpdq = computeDFdpdq(a,b,diffNormSquared);
-
- // Compute third derivatives of F
- Tensor3<T,N,N,N> dFdpdqdq;
-
- for (size_t i=0; i<N; i++) {
-
- for (size_t j=0; j<N; j++) {
-
- for (size_t k=0; k<N; k++) {
-
- if (i!=N-1 and j!=N-1 and k!=N-1) {
-
- dFdpdqdq[i][j][k] = 0;
-
- } else if (i!=N-1 and j!=N-1 and k==N-1) {
-
- dFdpdqdq[i][j][k] = (i==j) / (p[N-1]*q[N-1]*q[N-1]);
-
- } else if (i!=N-1 and j==N-1 and k!=N-1) {
-
- dFdpdqdq[i][j][k] = (i==k) / (p[N-1]*q[N-1]*q[N-1]);
-
- } else if (i!=N-1 and j==N-1 and k==N-1) {
-
- dFdpdqdq[i][j][k] = 2*(p[i] - q[i]) / (p[N-1]*Dune::power(q[N-1],3));
-
- } else if (i==N-1 and j!=N-1 and k!=N-1) {
-
- dFdpdqdq[i][j][k] = -(j==k) / (p[N-1]*p[N-1]*q[N-1]);
-
- } else if (i==N-1 and j!=N-1 and k==N-1) {
-
- dFdpdqdq[i][j][k] = -(p[j] - q[j]) / (p[N-1]*p[N-1]*Dune::power(q[N-1],2));
-
- } else if (i==N-1 and j==N-1 and k!=N-1) {
-
- dFdpdqdq[i][j][k] = -(p[k] - q[k]) / (p[N-1]*p[N-1]*Dune::power(q[N-1],2));
-
- } else if (i==N-1 and j==N-1 and k==N-1) {
-
- dFdpdqdq[i][j][k] = 1.0/(p[N-1]*q[N-1]*q[N-1])
- + 2*(p[N-1]-q[N-1])/(p[N-1]*Dune::power(q[N-1],3))
- - (p[N-1]-q[N-1])/(p[N-1]*p[N-1]*q[N-1]*q[N-1])
- - diffNormSquared / (p[N-1]*p[N-1]*Dune::power(q[N-1],3));
-
- }
-
- }
-
- }
-
- }
+ TangentVector vUnit = v;
+ vUnit /= vNorm;
- //
- T x = 1 + diffNormSquared/ (2*p[N-1]*q[N-1]);
- T alphaPrime = derivativeOfArcCosHSquared(x);
- T alphaPrimePrime = secondDerivativeOfArcCosHSquared(x);
- T alphaPrimePrimePrime = thirdDerivativeOfArcCosHSquared(x);
+ // Compute the coefficients a,b,c,d of the Moebius transform that transforms
+ // the unit speed upward geodesic to the one through p with direction vUnit.
+ // We expect the Moebius transform to be an isometry, i.e. ad-bc = 1.
+ T cc = 1/(2*p.data_[N-1]) - vUnit[N-1] / (2*p.data_[N-1]*p.data_[N-1]);
+ T dd = 1/(2*p.data_[N-1]) + vUnit[N-1] / (2*p.data_[N-1]*p.data_[N-1]);
+ T ac = vUnit[0] / (2*p.data_[N-1]) + p.data_[0]*cc;
+ T bd = p.data_[0] / p.data_[N-1] - ac;
- // Sum it all together
- for (size_t i=0; i<N; i++)
- for (size_t j=0; j<N; j++)
- for (size_t k=0; k<N; k++)
- result[i][j][k] = alphaPrimePrimePrime * dFdp[i] * dFdq[j] * dFdq[k]
- + alphaPrimePrime * (dFdpdq[i][j] * dFdq[k] + dFdpdq[i][k] * dFdq[j] + dFdqdq[j][k] * dFdp[i])
- + alphaPrime * dFdpdqdq[i][j][k];
+ HyperbolicHalfspacePoint result;
- return result;
+ // vertical part
+ result.data_[1] = std::exp(vNorm) / (cc*std::exp(2*vNorm) + dd);
- }
-
-
- /** \brief Project tangent vector of R^n onto the tangent space. For H^m this is the identity */
- EmbeddedTangentVector projectOntoTangentSpace(const EmbeddedTangentVector& v) const {
- return v;
- }
+ // horizontal part
+ result.data_[0] = (ac*std::exp(2*vNorm) + bd) / (cc*std::exp(2*vNorm) + dd);
- /** \brief The global coordinates, if you really want them */
- const CoordinateType& globalCoordinates() const {
- return data_;
- }
+ return result;
+ }
- /** \brief Compute an orthonormal basis of the tangent space of H^N.
- */
- Dune::FieldMatrix<T,N,N> orthonormalFrame() const {
+ /** \brief Hyperbolic distance between two points
+ *
+ * \f dist(a,b) = arccosh ( 1 + ||a-b||^2 / (2a_n b_n) \f
+ */
+ static T distance(const HyperbolicHalfspacePoint& a, const HyperbolicHalfspacePoint& b) {
- Dune::ScaledIdentityMatrix<T,N> result( data_[N-1] );
+ T result(0);
+
+ for (size_t i=0; i<N; i++)
+ result += (a.data_[i]-b.data_[i])*(a.data_[i]-b.data_[i]);
+
+ return std::acosh(1 + result / (2*a.data_[N-1]*b.data_[N-1]));
+ }
+
+ /** \brief Compute the gradient of the squared distance function keeping the first argument fixed
+
+ Unlike the distance itself the squared distance is differentiable at zero
+ */
+ static EmbeddedTangentVector derivativeOfDistanceSquaredWRTSecondArgument(const HyperbolicHalfspacePoint& a, const HyperbolicHalfspacePoint& b) {
+
+ T diffNormSquared(0);
+
+ for (size_t i=0; i<N; i++)
+ diffNormSquared += (a.data_[i]-b.data_[i])*(a.data_[i]-b.data_[i]);
+
+ TangentVector result = computeDFdq(a,b,diffNormSquared);
+
+ T x = 1 + diffNormSquared/ (2*a.data_[N-1]*b.data_[N-1]);
+
+ result *= derivativeOfArcCosHSquared(x);
+
+ return result;
+ }
+
+ /** \brief Compute the Hessian of the squared distance function keeping the first argument fixed
+
+ Unlike the distance itself the squared distance is differentiable at zero
+ */
+ static Dune::FieldMatrix<T,N,N> secondDerivativeOfDistanceSquaredWRTSecondArgument(const HyperbolicHalfspacePoint& a, const HyperbolicHalfspacePoint& b) {
+
+ T diffNormSquared = (a.data_-b.data_).two_norm2();
+
+ // Compute first derivative of F
+ Dune::FieldVector<T,N> dFdq = computeDFdq(a,b,diffNormSquared);
+
+ // Compute second derivatives of F
+ Dune::FieldMatrix<T,N,N> dFdqdq = computeDFdqdq(a,b,diffNormSquared);
+
+ //
+ T x = 1 + diffNormSquared/ (2*a.data_[N-1]*b.data_[N-1]);
+ T alphaPrime = derivativeOfArcCosHSquared(x);
+ T alphaPrimePrime = secondDerivativeOfArcCosHSquared(x);
+
+ // Sum it all together
+ Dune::FieldMatrix<T,N,N> result;
+ for (size_t i=0; i<N; i++)
+ for (size_t j=0; j<N; j++)
+ result[i][j] = alphaPrimePrime * dFdq[i] * dFdq[j] + alphaPrime * dFdqdq[i][j];
+
+ return result;
+ }
+
+ /** \brief Compute the mixed second derivative \partial d^2 / \partial da db
+
+ */
+ static Dune::FieldMatrix<T,N,N> secondDerivativeOfDistanceSquaredWRTFirstAndSecondArgument(const HyperbolicHalfspacePoint& a, const HyperbolicHalfspacePoint& b)
+ {
+ // abbreviate notation
+ const Dune::FieldVector<T,N>& p = a.data_;
+ const Dune::FieldVector<T,N>& q = b.data_;
+
+ T diffNormSquared = (p-q).two_norm2();
+
+ // Compute first derivatives of F with respect to p and q
+ Dune::FieldVector<T,N> dFdp = computeDFdp(a,b,diffNormSquared);
+ Dune::FieldVector<T,N> dFdq = computeDFdq(a,b,diffNormSquared);
+
+ // Compute second derivatives of F
+ Dune::FieldMatrix<T,N,N> dFdpdq = computeDFdpdq(a,b,diffNormSquared);
+
+ //
+ T x = 1 + diffNormSquared/ (2*p[N-1]*q[N-1]);
+ T alphaPrime = derivativeOfArcCosHSquared(x);
+ T alphaPrimePrime = secondDerivativeOfArcCosHSquared(x);
+
+ // Sum it all together
+ Dune::FieldMatrix<T,N,N> result;
+ for (size_t i=0; i<N; i++)
+ for (size_t j=0; j<N; j++)
+ result[i][j] = alphaPrimePrime * dFdp[i] * dFdq[j] + alphaPrime * dFdpdq[i][j];
+
+ return result;
+ }
+
+
+ /** \brief Compute the third derivative \partial d^3 / \partial dq^3
+
+ Unlike the distance itself the squared distance is differentiable at zero
+ */
+ static Tensor3<T,N,N,N> thirdDerivativeOfDistanceSquaredWRTSecondArgument(const HyperbolicHalfspacePoint& a, const HyperbolicHalfspacePoint& b)
+ {
+ Tensor3<T,N,N,N> result;
+
+ // abbreviate notation
+ const Dune::FieldVector<T,N>& p = a.data_;
+ const Dune::FieldVector<T,N>& q = b.data_;
+
+ T diffNormSquared = (p-q).two_norm2();
+
+ // Compute first derivative of F
+ Dune::FieldVector<T,N> dFdq = computeDFdq(a,b,diffNormSquared);
+
+ // Compute second derivatives of F
+ Dune::FieldMatrix<T,N,N> dFdqdq = computeDFdqdq(a,b,diffNormSquared);
+
+ // Compute third derivatives of F
+ Tensor3<T,N,N,N> dFdqdqdq;
+
+ for (size_t i=0; i<N; i++) {
+
+ for (size_t j=0; j<N; j++) {
+
+ for (size_t k=0; k<N; k++) {
+
+ if (i!=N-1 and j!=N-1 and k!=N-1) {
+
+ dFdqdqdq[i][j][k] = 0;
+
+ } else if (i!=N-1 and j!=N-1 and k==N-1) {
+
+ dFdqdqdq[i][j][k] = -(i==j) / (p[N-1]*q[N-1]*q[N-1]);
+
+ } else if (i!=N-1 and j==N-1 and k!=N-1) {
+
+ dFdqdqdq[i][j][k] = -(i==k) / (p[N-1]*q[N-1]*q[N-1]);
+
+ } else if (i!=N-1 and j==N-1 and k==N-1) {
+
+ dFdqdqdq[i][j][k] = -2*(p[i] - q[i]) / (p[N-1]*Dune::power(q[N-1],3));
+
+ } else if (i==N-1 and j!=N-1 and k!=N-1) {
+
+ dFdqdqdq[i][j][k] = - (j==k) / (p[N-1]*q[N-1]*q[N-1]);
+
+ } else if (i==N-1 and j!=N-1 and k==N-1) {
+
+ dFdqdqdq[i][j][k] = -2*(p[j] - q[j]) / (p[N-1]*Dune::power(q[N-1],3));
+
+ } else if (i==N-1 and j==N-1 and k!=N-1) {
+
+ dFdqdqdq[i][j][k] = -2*(p[k] - q[k]) / (p[N-1]*Dune::power(q[N-1],3));
+
+ } else if (i==N-1 and j==N-1 and k==N-1) {
+
+ dFdqdqdq[i][j][k] = -2/Dune::power(q[N-1],3) - 1/(p[N-1]*q[N-1]*q[N-1]) - 4*(p[N-1]-q[N-1])/(p[N-1]*Dune::power(q[N-1],3))
+ - 3*diffNormSquared / (p[N-1]*Dune::power(q[N-1],4));
+
+ }
+
+ }
+
+ }
- return Dune::FieldMatrix<T,N,N>(result);
- }
-
- /** \brief Scalar product of two tangent vectors */
- T metric(const TangentVector& v, const TangentVector& w) const
- {
- return v*w/(data_[N-1]*data_[N-1]);
}
- /** \brief Write unit vector object to output stream */
- friend std::ostream& operator<< (std::ostream& s, const HyperbolicHalfspacePoint& p)
- {
- return s << p.data_;
+ //
+ T x = 1 + diffNormSquared/ (2*p[N-1]*q[N-1]);
+ T alphaPrime = derivativeOfArcCosHSquared(x);
+ T alphaPrimePrime = secondDerivativeOfArcCosHSquared(x);
+ T alphaPrimePrimePrime = thirdDerivativeOfArcCosHSquared(x);
+
+ // Sum it all together
+ for (size_t i=0; i<N; i++)
+ for (size_t j=0; j<N; j++)
+ for (size_t k=0; k<N; k++)
+ result[i][j][k] = alphaPrimePrimePrime * dFdq[i] * dFdq[j] * dFdq[k]
+ + alphaPrimePrime * (dFdqdq[i][j] * dFdq[k] + dFdqdq[i][k] * dFdq[j] + dFdqdq[j][k] * dFdq[i])
+ + alphaPrime * dFdqdqdq[i][j][k];
+
+ return result;
+ }
+
+ /** \brief Compute the mixed third derivative \partial d^3 / \partial da db^2
+ */
+ static Tensor3<T,N,N,N> thirdDerivativeOfDistanceSquaredWRTFirst1AndSecond2Argument(const HyperbolicHalfspacePoint& a, const HyperbolicHalfspacePoint& b)
+ {
+ Tensor3<T,N,N,N> result;
+
+ // abbreviate notation
+ const Dune::FieldVector<T,N>& p = a.data_;
+ const Dune::FieldVector<T,N>& q = b.data_;
+
+ T diffNormSquared = (p-q).two_norm2();
+
+ // Compute first derivatives of F with respect to p and q
+ Dune::FieldVector<T,N> dFdp = computeDFdp(a,b,diffNormSquared);
+ Dune::FieldVector<T,N> dFdq = computeDFdq(a,b,diffNormSquared);
+
+ // Compute second derivatives of F
+ Dune::FieldMatrix<T,N,N> dFdqdq = computeDFdqdq(a,b,diffNormSquared);
+
+ Dune::FieldMatrix<T,N,N> dFdpdq = computeDFdpdq(a,b,diffNormSquared);
+
+ // Compute third derivatives of F
+ Tensor3<T,N,N,N> dFdpdqdq;
+
+ for (size_t i=0; i<N; i++) {
+
+ for (size_t j=0; j<N; j++) {
+
+ for (size_t k=0; k<N; k++) {
+
+ if (i!=N-1 and j!=N-1 and k!=N-1) {
+
+ dFdpdqdq[i][j][k] = 0;
+
+ } else if (i!=N-1 and j!=N-1 and k==N-1) {
+
+ dFdpdqdq[i][j][k] = (i==j) / (p[N-1]*q[N-1]*q[N-1]);
+
+ } else if (i!=N-1 and j==N-1 and k!=N-1) {
+
+ dFdpdqdq[i][j][k] = (i==k) / (p[N-1]*q[N-1]*q[N-1]);
+
+ } else if (i!=N-1 and j==N-1 and k==N-1) {
+
+ dFdpdqdq[i][j][k] = 2*(p[i] - q[i]) / (p[N-1]*Dune::power(q[N-1],3));
+
+ } else if (i==N-1 and j!=N-1 and k!=N-1) {
+
+ dFdpdqdq[i][j][k] = -(j==k) / (p[N-1]*p[N-1]*q[N-1]);
+
+ } else if (i==N-1 and j!=N-1 and k==N-1) {
+
+ dFdpdqdq[i][j][k] = -(p[j] - q[j]) / (p[N-1]*p[N-1]*Dune::power(q[N-1],2));
+
+ } else if (i==N-1 and j==N-1 and k!=N-1) {
+
+ dFdpdqdq[i][j][k] = -(p[k] - q[k]) / (p[N-1]*p[N-1]*Dune::power(q[N-1],2));
+
+ } else if (i==N-1 and j==N-1 and k==N-1) {
+
+ dFdpdqdq[i][j][k] = 1.0/(p[N-1]*q[N-1]*q[N-1])
+ + 2*(p[N-1]-q[N-1])/(p[N-1]*Dune::power(q[N-1],3))
+ - (p[N-1]-q[N-1])/(p[N-1]*p[N-1]*q[N-1]*q[N-1])
+ - diffNormSquared / (p[N-1]*p[N-1]*Dune::power(q[N-1],3));
+
+ }
+
+ }
+
+ }
+
}
+ //
+ T x = 1 + diffNormSquared/ (2*p[N-1]*q[N-1]);
+ T alphaPrime = derivativeOfArcCosHSquared(x);
+ T alphaPrimePrime = secondDerivativeOfArcCosHSquared(x);
+ T alphaPrimePrimePrime = thirdDerivativeOfArcCosHSquared(x);
+
+ // Sum it all together
+ for (size_t i=0; i<N; i++)
+ for (size_t j=0; j<N; j++)
+ for (size_t k=0; k<N; k++)
+ result[i][j][k] = alphaPrimePrimePrime * dFdp[i] * dFdq[j] * dFdq[k]
+ + alphaPrimePrime * (dFdpdq[i][j] * dFdq[k] + dFdpdq[i][k] * dFdq[j] + dFdqdq[j][k] * dFdp[i])
+ + alphaPrime * dFdpdqdq[i][j][k];
+
+ return result;
+
+ }
+
+
+ /** \brief Project tangent vector of R^n onto the tangent space. For H^m this is the identity */
+ EmbeddedTangentVector projectOntoTangentSpace(const EmbeddedTangentVector& v) const {
+ return v;
+ }
+
+ /** \brief The global coordinates, if you really want them */
+ const CoordinateType& globalCoordinates() const {
+ return data_;
+ }
+
+ /** \brief Compute an orthonormal basis of the tangent space of H^N.
+ */
+ Dune::FieldMatrix<T,N,N> orthonormalFrame() const {
+
+ Dune::ScaledIdentityMatrix<T,N> result( data_[N-1] );
+
+ return Dune::FieldMatrix<T,N,N>(result);
+ }
+
+ /** \brief Scalar product of two tangent vectors */
+ T metric(const TangentVector& v, const TangentVector& w) const
+ {
+ return v*w/(data_[N-1]*data_[N-1]);
+ }
+
+ /** \brief Write unit vector object to output stream */
+ friend std::ostream& operator<< (std::ostream& s, const HyperbolicHalfspacePoint& p)
+ {
+ return s << p.data_;
+ }
+
private:
- Dune::FieldVector<T,N> data_;
+ Dune::FieldVector<T,N> data_;
};
#endif
diff --git a/dune/gfe/spaces/orthogonalmatrix.hh b/dune/gfe/spaces/orthogonalmatrix.hh
index d87effc5..71a8f76e 100644
--- a/dune/gfe/spaces/orthogonalmatrix.hh
+++ b/dune/gfe/spaces/orthogonalmatrix.hh
@@ -31,96 +31,96 @@ public:
/** \brief A tangent vector as a vector in the surrounding coordinate space */
typedef Dune::FieldVector<T,embeddedDim> EmbeddedTangentVector;
- /** \brief Default constructor -- leaves the matrix uninitialized */
- OrthogonalMatrix()
- {}
-
- /** \brief Constructor from a general matrix
- *
- * It is not checked whether the matrix is really orthogonal
- */
- explicit OrthogonalMatrix(const Dune::FieldMatrix<T,N,N>& matrix)
+ /** \brief Default constructor -- leaves the matrix uninitialized */
+ OrthogonalMatrix()
+ {}
+
+ /** \brief Constructor from a general matrix
+ *
+ * It is not checked whether the matrix is really orthogonal
+ */
+ explicit OrthogonalMatrix(const Dune::FieldMatrix<T,N,N>& matrix)
: data_(matrix)
- {}
-
- /** \brief Copy constructor
- *
- * It is not checked whether the matrix is really orthogonal
- */
- explicit OrthogonalMatrix(const CoordinateType& other)
- {
- DUNE_THROW(Dune::NotImplemented, "constructor");
- }
-
- /** \brief Const access to the matrix entries */
- const Dune::FieldMatrix<T,N,N>& data() const
- {
- return data_;
- }
-
- /** \brief Project the input matrix onto the tangent space at "this"
- *
- * See Absil, Mahoney, Sepulche, Example 5.3.2 for the formula
- * \f[ P_X \xi = X \operatorname{skew} (X^T \xi) \f]
- *
- */
- Dune::FieldMatrix<T,N,N> projectOntoTangentSpace(const Dune::FieldMatrix<T,N,N>& matrix) const
- {
- // rename to get the same notation as Absil & Co
- const Dune::FieldMatrix<T,N,N>& X = data_;
-
- // X^T \xi
- Dune::FieldMatrix<T,N,N> XTxi(0);
- for (int i=0; i<N; i++)
- for (int j=0; j<N; j++)
- for (int k=0; k<N; k++)
- XTxi[i][j] += X[k][i] * matrix[k][j];
-
- // skew (X^T \xi)
- Dune::FieldMatrix<T,N,N> skewXTxi(0);
- for (int i=0; i<N; i++)
- for (int j=0; j<N; j++)
- skewXTxi[i][j] = 0.5 * ( XTxi[i][j] - XTxi[j][i] );
-
- // X skew (X^T \xi)
- Dune::FieldMatrix<T,N,N> result(0);
- for (int i=0; i<N; i++)
- for (int j=0; j<N; j++)
- for (int k=0; k<N; k++)
- result[i][j] += X[i][k] * skewXTxi[k][j];
-
- return result;
- }
-
- /** \brief Rebind the OrthogonalMatrix to another coordinate type */
- template<class U>
- struct rebind
- {
- typedef OrthogonalMatrix<U,N> other;
- };
-
- OrthogonalMatrix& operator= (const CoordinateType& other)
- {
- std::size_t idx = 0;
- for (int i=0; i<N; i++)
- for (int j=0; j<N; j++)
- data_[i][j] = other[idx++];
- return *this;
- }
+ {}
+
+ /** \brief Copy constructor
+ *
+ * It is not checked whether the matrix is really orthogonal
+ */
+ explicit OrthogonalMatrix(const CoordinateType& other)
+ {
+ DUNE_THROW(Dune::NotImplemented, "constructor");
+ }
+
+ /** \brief Const access to the matrix entries */
+ const Dune::FieldMatrix<T,N,N>& data() const
+ {
+ return data_;
+ }
+
+ /** \brief Project the input matrix onto the tangent space at "this"
+ *
+ * See Absil, Mahoney, Sepulche, Example 5.3.2 for the formula
+ * \f[ P_X \xi = X \operatorname{skew} (X^T \xi) \f]
+ *
+ */
+ Dune::FieldMatrix<T,N,N> projectOntoTangentSpace(const Dune::FieldMatrix<T,N,N>& matrix) const
+ {
+ // rename to get the same notation as Absil & Co
+ const Dune::FieldMatrix<T,N,N>& X = data_;
+
+ // X^T \xi
+ Dune::FieldMatrix<T,N,N> XTxi(0);
+ for (int i=0; i<N; i++)
+ for (int j=0; j<N; j++)
+ for (int k=0; k<N; k++)
+ XTxi[i][j] += X[k][i] * matrix[k][j];
+
+ // skew (X^T \xi)
+ Dune::FieldMatrix<T,N,N> skewXTxi(0);
+ for (int i=0; i<N; i++)
+ for (int j=0; j<N; j++)
+ skewXTxi[i][j] = 0.5 * ( XTxi[i][j] - XTxi[j][i] );
+
+ // X skew (X^T \xi)
+ Dune::FieldMatrix<T,N,N> result(0);
+ for (int i=0; i<N; i++)
+ for (int j=0; j<N; j++)
+ for (int k=0; k<N; k++)
+ result[i][j] += X[i][k] * skewXTxi[k][j];
+
+ return result;
+ }
+
+ /** \brief Rebind the OrthogonalMatrix to another coordinate type */
+ template<class U>
+ struct rebind
+ {
+ typedef OrthogonalMatrix<U,N> other;
+ };
+
+ OrthogonalMatrix& operator= (const CoordinateType& other)
+ {
+ std::size_t idx = 0;
+ for (int i=0; i<N; i++)
+ for (int j=0; j<N; j++)
+ data_[i][j] = other[idx++];
+ return *this;
+ }
/** \brief The exponential map from a given point $p \in SO(n)$.
- \param v A tangent vector.
+ \param v A tangent vector.
*/
static OrthogonalMatrix<T,3> exp(const OrthogonalMatrix<T,N>& p, const TangentVector& v)
{
DUNE_THROW(Dune::NotImplemented, "exp");
}
- /** \brief Return the actual matrix */
- void matrix(Dune::FieldMatrix<T,N,N>& m) const
+ /** \brief Return the actual matrix */
+ void matrix(Dune::FieldMatrix<T,N,N>& m) const
{
- m = data_;
+ m = data_;
}
/** \brief Project tangent vector of R^n onto the normal space space */
@@ -171,10 +171,10 @@ public:
}
private:
-
- /** \brief The actual data */
- Dune::FieldMatrix<T,N,N> data_;
-
+
+ /** \brief The actual data */
+ Dune::FieldMatrix<T,N,N> data_;
+
};
#endif // DUNE_GFE_SPACES_ORTHOGONALMATRIX_HH
diff --git a/dune/gfe/spaces/productmanifold.hh b/dune/gfe/spaces/productmanifold.hh
index afc37cf9..78a7ffe0 100644
--- a/dune/gfe/spaces/productmanifold.hh
+++ b/dune/gfe/spaces/productmanifold.hh
@@ -32,13 +32,13 @@ namespace Dune::GFE
template<class U,typename Tfirst,typename ... TargetSpaces2>
struct rebindHelper
{
- typedef ProductManifold<typename Tfirst::template rebind<U>::other ,typename rebindHelper<U,TargetSpaces2...>::other> other;
+ typedef ProductManifold<typename Tfirst::template rebind<U>::other ,typename rebindHelper<U,TargetSpaces2...>::other> other;
};
template<class U,typename Tlast>
struct rebindHelper<U,Tlast>
{
- typedef typename Tlast::template rebind<U>::other other;
+ typedef typename Tlast::template rebind<U>::other other;
};
}
@@ -87,13 +87,13 @@ namespace Dune::GFE
{
DUNE_ASSERT_BOUNDS(globalCoordinates.size()== sumEmbeddedDim)
auto constructorFunctor =[] (auto& argsTuple, std::array<std::size_t,2>& posHelper, const auto& manifoldInt)
- {
- auto& res = std::get<0>(argsTuple)[manifoldInt];
- const auto& globalCoords =std::get<1>(argsTuple);
- using Manifold = std::remove_const_t<typename std::remove_reference_t<decltype(res)> >;
- res = Manifold(Dune::GFE::segmentAt<Manifold::embeddedDim>(globalCoords,posHelper[0]));
- posHelper[0] += Manifold::embeddedDim;
- };
+ {
+ auto& res = std::get<0>(argsTuple)[manifoldInt];
+ const auto& globalCoords =std::get<1>(argsTuple);
+ using Manifold = std::remove_const_t<typename std::remove_reference_t<decltype(res)> >;
+ res = Manifold(Dune::GFE::segmentAt<Manifold::embeddedDim>(globalCoords,posHelper[0]));
+ posHelper[0] += Manifold::embeddedDim;
+ };
foreachManifold(constructorFunctor,*this,globalCoordinates);
}
@@ -127,15 +127,15 @@ namespace Dune::GFE
{
ProductManifold res;
auto expFunctor =[] (auto& argsTuple, std::array<std::size_t,2>& posHelper, const auto& manifoldInt)
- {
- auto& res = std::get<0>(argsTuple)[manifoldInt];
- const auto& p = std::get<1>(argsTuple)[manifoldInt];
- const auto& tang = std::get<2>(argsTuple);
- using Manifold = std::remove_const_t<typename std::remove_reference_t<decltype(res)> >;
- auto currentEmbeddedTangentVector = Dune::GFE::segmentAt<Manifold::embeddedDim>(tang,posHelper[0]);
- res = Manifold::exp(p,currentEmbeddedTangentVector);
- posHelper[0] += Manifold::embeddedDim;
- };
+ {
+ auto& res = std::get<0>(argsTuple)[manifoldInt];
+ const auto& p = std::get<1>(argsTuple)[manifoldInt];
+ const auto& tang = std::get<2>(argsTuple);
+ using Manifold = std::remove_const_t<typename std::remove_reference_t<decltype(res)> >;
+ auto currentEmbeddedTangentVector = Dune::GFE::segmentAt<Manifold::embeddedDim>(tang,posHelper[0]);
+ res = Manifold::exp(p,currentEmbeddedTangentVector);
+ posHelper[0] += Manifold::embeddedDim;
+ };
foreachManifold(expFunctor,res,p,v);
return res;
}
@@ -154,15 +154,15 @@ namespace Dune::GFE
{
EmbeddedTangentVector diff;
auto logFunctor =[] (auto& argsTuple, std::array<std::size_t,2>& posHelper, const auto& manifoldInt)
- {
- auto& res = std::get<0>(argsTuple);
- const auto& a = std::get<1>(argsTuple)[manifoldInt];
- const auto& b = std::get<2>(argsTuple)[manifoldInt];
- using Manifold = std::remove_const_t<typename std::remove_reference_t<decltype(a)> >;
- const auto diffLoc = Manifold::log(a,b);
- std::copy(diffLoc.begin(),diffLoc.end(),res.begin()+posHelper[0]);
- posHelper[0] += Manifold::embeddedDim;
- };
+ {
+ auto& res = std::get<0>(argsTuple);
+ const auto& a = std::get<1>(argsTuple)[manifoldInt];
+ const auto& b = std::get<2>(argsTuple)[manifoldInt];
+ using Manifold = std::remove_const_t<typename std::remove_reference_t<decltype(a)> >;
+ const auto diffLoc = Manifold::log(a,b);
+ std::copy(diffLoc.begin(),diffLoc.end(),res.begin()+posHelper[0]);
+ posHelper[0] += Manifold::embeddedDim;
+ };
foreachManifold(logFunctor,diff,a, b);
return diff;
}
@@ -172,13 +172,13 @@ namespace Dune::GFE
{
field_type dist=0.0;
auto distanceFunctor =[] (auto& argsTuple, std::array<std::size_t,2>& posHelper, const auto& manifoldInt)
- {
- auto& res = std::get<0>(argsTuple);
- const auto& a = std::get<1>(argsTuple)[manifoldInt];
- const auto& b = std::get<2>(argsTuple)[manifoldInt];
- using Manifold = std::remove_const_t<typename std::remove_reference_t<decltype(a)> >;
- res += power(Manifold::distance(a,b),2);
- };
+ {
+ auto& res = std::get<0>(argsTuple);
+ const auto& a = std::get<1>(argsTuple)[manifoldInt];
+ const auto& b = std::get<2>(argsTuple)[manifoldInt];
+ using Manifold = std::remove_const_t<typename std::remove_reference_t<decltype(a)> >;
+ res += power(Manifold::distance(a,b),2);
+ };
foreachManifold(distanceFunctor,dist,a, b);
return sqrt(dist);
}
@@ -191,15 +191,15 @@ namespace Dune::GFE
derivative= 0.0;
auto derivOfDistSqdWRTSecArgFunctor = [] (auto& argsTuple, std::array<std::size_t,2>& posHelper, const auto& manifoldInt)
- {
- auto& derivative = std::get<0>(argsTuple);
- const auto& a = std::get<1>(argsTuple)[manifoldInt];
- const auto& b = std::get<2>(argsTuple)[manifoldInt];
- using Manifold = std::remove_const_t<typename std::remove_reference_t<decltype(a)> >;
- const auto diffLoc = Manifold::derivativeOfDistanceSquaredWRTSecondArgument(a,b);
- std::copy(diffLoc.begin(),diffLoc.end(),derivative.begin()+posHelper[0]);
- posHelper[0] += Manifold::embeddedDim;
- };
+ {
+ auto& derivative = std::get<0>(argsTuple);
+ const auto& a = std::get<1>(argsTuple)[manifoldInt];
+ const auto& b = std::get<2>(argsTuple)[manifoldInt];
+ using Manifold = std::remove_const_t<typename std::remove_reference_t<decltype(a)> >;
+ const auto diffLoc = Manifold::derivativeOfDistanceSquaredWRTSecondArgument(a,b);
+ std::copy(diffLoc.begin(),diffLoc.end(),derivative.begin()+posHelper[0]);
+ posHelper[0] += Manifold::embeddedDim;
+ };
foreachManifold(derivOfDistSqdWRTSecArgFunctor, derivative,a, b);
return derivative;
}
@@ -210,17 +210,17 @@ namespace Dune::GFE
{
Dune::SymmetricMatrix<field_type,embeddedDim> result;
auto secDerivOfDistSqWRTSecArgFunctor = [] (auto& argsTuple, std::array<std::size_t,2>& posHelper, const auto& manifoldInt)
- {
- auto& deriv = std::get<0>(argsTuple);
- const auto& a = std::get<1>(argsTuple)[manifoldInt];
- const auto& b = std::get<2>(argsTuple)[manifoldInt];
- using Manifold = std::remove_const_t<typename std::remove_reference_t<decltype(a)> >;
- const auto diffLoc = Manifold::secondDerivativeOfDistanceSquaredWRTSecondArgument(a,b);
- for(size_t i=posHelper[0]; i<posHelper[0]+Manifold::embeddedDim; ++i )
- for(size_t j=posHelper[0]; j<=i; ++j )
- deriv(i,j) = diffLoc(i - posHelper[0], j - posHelper[0]);
- posHelper[0] += Manifold::embeddedDim;
- };
+ {
+ auto& deriv = std::get<0>(argsTuple);
+ const auto& a = std::get<1>(argsTuple)[manifoldInt];
+ const auto& b = std::get<2>(argsTuple)[manifoldInt];
+ using Manifold = std::remove_const_t<typename std::remove_reference_t<decltype(a)> >;
+ const auto diffLoc = Manifold::secondDerivativeOfDistanceSquaredWRTSecondArgument(a,b);
+ for(size_t i=posHelper[0]; i<posHelper[0]+Manifold::embeddedDim; ++i )
+ for(size_t j=posHelper[0]; j<=i; ++j )
+ deriv(i,j) = diffLoc(i - posHelper[0], j - posHelper[0]);
+ posHelper[0] += Manifold::embeddedDim;
+ };
foreachManifold(secDerivOfDistSqWRTSecArgFunctor,result,a, b);
return result;
}
@@ -232,17 +232,17 @@ namespace Dune::GFE
{
Dune::FieldMatrix<field_type,embeddedDim,embeddedDim> result(0);
auto secDerivOfDistSqWRTFirstAndSecArgFunctor = [] (auto& argsTuple, std::array<std::size_t,2>& posHelper, const auto& manifoldInt)
- {
- auto& deriv = std::get<0>(argsTuple);
- const auto& a = std::get<1>(argsTuple)[manifoldInt];
- const auto& b = std::get<2>(argsTuple)[manifoldInt];
- using Manifold = std::remove_const_t<typename std::remove_reference_t<decltype(a)> >;
- const auto diffLoc = Manifold::secondDerivativeOfDistanceSquaredWRTFirstAndSecondArgument(a,b);
- for(size_t i=posHelper[0]; i<posHelper[0]+Manifold::embeddedDim; ++i )
- for(size_t j=posHelper[0]; j<posHelper[0]+Manifold::embeddedDim; ++j )
- deriv[i][j] = diffLoc[i - posHelper[0]][ j - posHelper[0]];
- posHelper[0] += Manifold::embeddedDim;
- };
+ {
+ auto& deriv = std::get<0>(argsTuple);
+ const auto& a = std::get<1>(argsTuple)[manifoldInt];
+ const auto& b = std::get<2>(argsTuple)[manifoldInt];
+ using Manifold = std::remove_const_t<typename std::remove_reference_t<decltype(a)> >;
+ const auto diffLoc = Manifold::secondDerivativeOfDistanceSquaredWRTFirstAndSecondArgument(a,b);
+ for(size_t i=posHelper[0]; i<posHelper[0]+Manifold::embeddedDim; ++i )
+ for(size_t j=posHelper[0]; j<posHelper[0]+Manifold::embeddedDim; ++j )
+ deriv[i][j] = diffLoc[i - posHelper[0]][ j - posHelper[0]];
+ posHelper[0] += Manifold::embeddedDim;
+ };
foreachManifold(secDerivOfDistSqWRTFirstAndSecArgFunctor,result,a, b);
return result;
}
@@ -254,18 +254,18 @@ namespace Dune::GFE
{
Tensor3<field_type,embeddedDim,embeddedDim,embeddedDim> result(0);
auto thirdDerivOfDistSqWRTSecArgFunctor =[](auto& argsTuple, std::array<std::size_t,2>& posHelper, const auto& manifoldInt)
- {
- auto& deriv = std::get<0>(argsTuple);
- const auto& a = std::get<1>(argsTuple)[manifoldInt];
- const auto& b = std::get<2>(argsTuple)[manifoldInt];
- using Manifold = std::remove_const_t<typename std::remove_reference_t<decltype(a)>>;
- const auto diffLoc = Manifold::thirdDerivativeOfDistanceSquaredWRTSecondArgument(a,b);
- for(size_t i=posHelper[0]; i<posHelper[0]+Manifold::embeddedDim; ++i )
- for(size_t j=posHelper[0]; j<posHelper[0]+Manifold::embeddedDim; ++j )
- for(size_t k=posHelper[0]; k<posHelper[0]+Manifold::embeddedDim; ++k )
- deriv[i][j][k] = diffLoc[i - posHelper[0]][ j - posHelper[0]][k - posHelper[0]];
- posHelper[0] += Manifold::embeddedDim;
- };
+ {
+ auto& deriv = std::get<0>(argsTuple);
+ const auto& a = std::get<1>(argsTuple)[manifoldInt];
+ const auto& b = std::get<2>(argsTuple)[manifoldInt];
+ using Manifold = std::remove_const_t<typename std::remove_reference_t<decltype(a)> >;
+ const auto diffLoc = Manifold::thirdDerivativeOfDistanceSquaredWRTSecondArgument(a,b);
+ for(size_t i=posHelper[0]; i<posHelper[0]+Manifold::embeddedDim; ++i )
+ for(size_t j=posHelper[0]; j<posHelper[0]+Manifold::embeddedDim; ++j )
+ for(size_t k=posHelper[0]; k<posHelper[0]+Manifold::embeddedDim; ++k )
+ deriv[i][j][k] = diffLoc[i - posHelper[0]][ j - posHelper[0]][k - posHelper[0]];
+ posHelper[0] += Manifold::embeddedDim;
+ };
foreachManifold(thirdDerivOfDistSqWRTSecArgFunctor,result,a, b);
return result;
}
@@ -277,18 +277,18 @@ namespace Dune::GFE
{
Tensor3<field_type,embeddedDim,embeddedDim,embeddedDim> result(0);
auto thirdDerivOfDistSqWRT1And2ArgFunctor =[] (auto& argsTuple, std::array<std::size_t,2>& posHelper, const auto& manifoldInt)
- {
- auto& deriv = std::get<0>(argsTuple);
- const auto& a = std::get<1>(argsTuple)[manifoldInt];
- const auto& b = std::get<2>(argsTuple)[manifoldInt];
- using Manifold = std::remove_const_t<typename std::remove_reference_t<decltype(a)>>;
- const auto diffLoc = Manifold::thirdDerivativeOfDistanceSquaredWRTFirst1AndSecond2Argument(a,b);
- for(size_t i=posHelper[0]; i<posHelper[0]+Manifold::embeddedDim; ++i )
- for(size_t j=posHelper[0]; j<posHelper[0]+Manifold::embeddedDim; ++j )
- for(size_t k=posHelper[0]; k<posHelper[0]+Manifold::embeddedDim; ++k )
- deriv[i][j][k] = diffLoc[i - posHelper[0]][ j - posHelper[0]][k - posHelper[0]];
- posHelper[0] += Manifold::embeddedDim;
- };
+ {
+ auto& deriv = std::get<0>(argsTuple);
+ const auto& a = std::get<1>(argsTuple)[manifoldInt];
+ const auto& b = std::get<2>(argsTuple)[manifoldInt];
+ using Manifold = std::remove_const_t<typename std::remove_reference_t<decltype(a)> >;
+ const auto diffLoc = Manifold::thirdDerivativeOfDistanceSquaredWRTFirst1AndSecond2Argument(a,b);
+ for(size_t i=posHelper[0]; i<posHelper[0]+Manifold::embeddedDim; ++i )
+ for(size_t j=posHelper[0]; j<posHelper[0]+Manifold::embeddedDim; ++j )
+ for(size_t k=posHelper[0]; k<posHelper[0]+Manifold::embeddedDim; ++k )
+ deriv[i][j][k] = diffLoc[i - posHelper[0]][ j - posHelper[0]][k - posHelper[0]];
+ posHelper[0] += Manifold::embeddedDim;
+ };
foreachManifold(thirdDerivOfDistSqWRT1And2ArgFunctor,result,a, b);
return result;
}
@@ -298,14 +298,14 @@ namespace Dune::GFE
{
EmbeddedTangentVector result {v};
auto projectOntoTangentSpaceFunctor =[] (auto& argsTuple, std::array<std::size_t,2>& posHelper, const auto& manifoldInt)
- {
- auto& v = std::get<0>(argsTuple);
- const auto& a = std::get<1>(argsTuple)[manifoldInt];
- using Manifold = std::remove_const_t<typename std::remove_reference_t<decltype(a)> >;
- const auto vLoc = a.projectOntoTangentSpace(Dune::GFE::segmentAt<Manifold::embeddedDim>(v,posHelper[0]));
- std::copy(vLoc.begin(),vLoc.end(),v.begin()+posHelper[0]);
- posHelper[0] += Manifold::embeddedDim;
- };
+ {
+ auto& v = std::get<0>(argsTuple);
+ const auto& a = std::get<1>(argsTuple)[manifoldInt];
+ using Manifold = std::remove_const_t<typename std::remove_reference_t<decltype(a)> >;
+ const auto vLoc = a.projectOntoTangentSpace(Dune::GFE::segmentAt<Manifold::embeddedDim>(v,posHelper[0]));
+ std::copy(vLoc.begin(),vLoc.end(),v.begin()+posHelper[0]);
+ posHelper[0] += Manifold::embeddedDim;
+ };
foreachManifold(projectOntoTangentSpaceFunctor,result,*this);
return result;
}
@@ -315,14 +315,14 @@ namespace Dune::GFE
{
EmbeddedTangentVector result {v};
auto projectOntoNormalSpaceFunctor =[] (auto& argsTuple, std::array<std::size_t,2>& posHelper, const auto& manifoldInt)
- {
- auto& v = std::get<0>(argsTuple);
- const auto& a = std::get<1>(argsTuple)[manifoldInt];
- using Manifold = std::remove_const_t<typename std::remove_reference_t<decltype(a)> >;
- const auto vLoc = a.projectOntoNormalSpace(Dune::GFE::segmentAt<Manifold::embeddedDim>(v,posHelper[0]));
- std::copy(vLoc.begin(),vLoc.end(),v.begin()+posHelper[0]);
- posHelper[0] += Manifold::embeddedDim;
- };
+ {
+ auto& v = std::get<0>(argsTuple);
+ const auto& a = std::get<1>(argsTuple)[manifoldInt];
+ using Manifold = std::remove_const_t<typename std::remove_reference_t<decltype(a)> >;
+ const auto vLoc = a.projectOntoNormalSpace(Dune::GFE::segmentAt<Manifold::embeddedDim>(v,posHelper[0]));
+ std::copy(vLoc.begin(),vLoc.end(),v.begin()+posHelper[0]);
+ posHelper[0] += Manifold::embeddedDim;
+ };
foreachManifold(projectOntoNormalSpaceFunctor,result,*this);
return result;
}
@@ -332,13 +332,13 @@ namespace Dune::GFE
{
ProductManifold<TargetSpaces ...> result {v};
auto projectOntoFunctor =[] (auto& argsTuple, std::array<std::size_t,2>& posHelper, const auto& manifoldInt)
- {
- auto& res = std::get<0>(argsTuple)[manifoldInt];
- auto& v = std::get<1>(argsTuple);
- using Manifold = std::remove_const_t<typename std::remove_reference_t<decltype(res)> >;
- res = Manifold::projectOnto(Dune::GFE::segmentAt<Manifold::embeddedDim>(v,posHelper[0]));
- posHelper[0] += Manifold::embeddedDim;
- };
+ {
+ auto& res = std::get<0>(argsTuple)[manifoldInt];
+ auto& v = std::get<1>(argsTuple);
+ using Manifold = std::remove_const_t<typename std::remove_reference_t<decltype(res)> >;
+ res = Manifold::projectOnto(Dune::GFE::segmentAt<Manifold::embeddedDim>(v,posHelper[0]));
+ posHelper[0] += Manifold::embeddedDim;
+ };
foreachManifold(projectOntoFunctor,result, v);
return result;
}
@@ -348,17 +348,17 @@ namespace Dune::GFE
{
Dune::FieldMatrix<typename CoordinateType::value_type, embeddedDim, embeddedDim> result;
auto derivativeOfProjectionFunctor =[] (auto& argsTuple, std::array<std::size_t,2>& posHelper, const auto& manifoldInt)
- {
- auto& res = std::get<0>(argsTuple);
- const auto& v = std::get<1>(argsTuple);
- const Dune::TupleVector<TargetSpaces...> ManifoldTuple;
- using Manifold = std::remove_const_t<typename std::remove_reference_t<decltype(ManifoldTuple[manifoldInt])> >;
- const auto vLoc = Manifold::derivativeOfProjection(Dune::GFE::segmentAt<Manifold::embeddedDim>(v,posHelper[0]));
- for(size_t k=posHelper[0]; k<posHelper[0]+Manifold::embeddedDim; ++k )
- for(size_t j=posHelper[0]; j<posHelper[0]+Manifold::embeddedDim; ++j )
- res[k][j] = vLoc[k - posHelper[0]][j-posHelper[0]];
- posHelper[0] += Manifold::embeddedDim;
- };
+ {
+ auto& res = std::get<0>(argsTuple);
+ const auto& v = std::get<1>(argsTuple);
+ const Dune::TupleVector<TargetSpaces...> ManifoldTuple;
+ using Manifold = std::remove_const_t<typename std::remove_reference_t<decltype(ManifoldTuple[manifoldInt])> >;
+ const auto vLoc = Manifold::derivativeOfProjection(Dune::GFE::segmentAt<Manifold::embeddedDim>(v,posHelper[0]));
+ for(size_t k=posHelper[0]; k<posHelper[0]+Manifold::embeddedDim; ++k )
+ for(size_t j=posHelper[0]; j<posHelper[0]+Manifold::embeddedDim; ++j )
+ res[k][j] = vLoc[k - posHelper[0]][j-posHelper[0]];
+ posHelper[0] += Manifold::embeddedDim;
+ };
foreachManifold(derivativeOfProjectionFunctor,result, v);
return result;
}
@@ -368,17 +368,17 @@ namespace Dune::GFE
{
EmbeddedTangentVector result;
auto weingartenFunctor =[] (auto& argsTuple, std::array<std::size_t,2>& posHelper, const auto& manifoldInt)
- {
- auto& res = std::get<0>(argsTuple);
- const auto& a = std::get<1>(argsTuple)[manifoldInt];
- const auto& z = std::get<2>(argsTuple);
- const auto& v = std::get<3>(argsTuple);
- using Manifold = std::remove_const_t<typename std::remove_reference_t<decltype(a)> >;
- const auto resLoc = a.weingarten(Dune::GFE::segmentAt<Manifold::embeddedDim>(z,posHelper[0]),
- Dune::GFE::segmentAt<Manifold::embeddedDim>(v,posHelper[0]));
- std::copy(resLoc.begin(),resLoc.end(),res.begin()+posHelper[0]);
- posHelper[0] +=Manifold::embeddedDim;
- };
+ {
+ auto& res = std::get<0>(argsTuple);
+ const auto& a = std::get<1>(argsTuple)[manifoldInt];
+ const auto& z = std::get<2>(argsTuple);
+ const auto& v = std::get<3>(argsTuple);
+ using Manifold = std::remove_const_t<typename std::remove_reference_t<decltype(a)> >;
+ const auto resLoc = a.weingarten(Dune::GFE::segmentAt<Manifold::embeddedDim>(z,posHelper[0]),
+ Dune::GFE::segmentAt<Manifold::embeddedDim>(v,posHelper[0]));
+ std::copy(resLoc.begin(),resLoc.end(),res.begin()+posHelper[0]);
+ posHelper[0] +=Manifold::embeddedDim;
+ };
foreachManifold(weingartenFunctor,result, *this,z, v);
return result;
}
@@ -389,17 +389,17 @@ namespace Dune::GFE
{
Dune::FieldMatrix<field_type,dim,embeddedDim> result(0);
auto orthonormalFrameFunctor =[] (auto& argsTuple, std::array<std::size_t,2>& posHelper, const auto& manifoldInt)
- {
- auto& res = std::get<0>(argsTuple);
- const auto& a = std::get<1>(argsTuple)[manifoldInt];
- using Manifold = std::remove_const_t<typename std::remove_reference_t<decltype(a)> >;
- const auto resLoc = a.orthonormalFrame();
- for(size_t i=posHelper[0]; i<posHelper[0]+Manifold::dim; ++i )
- for(size_t j=posHelper[1]; j<posHelper[1]+Manifold::embeddedDim; ++j )
- res[i][j] = resLoc[i - posHelper[0]][j-posHelper[1]];
- posHelper[0] += Manifold::dim;
- posHelper[1] += Manifold::embeddedDim;
- };
+ {
+ auto& res = std::get<0>(argsTuple);
+ const auto& a = std::get<1>(argsTuple)[manifoldInt];
+ using Manifold = std::remove_const_t<typename std::remove_reference_t<decltype(a)> >;
+ const auto resLoc = a.orthonormalFrame();
+ for(size_t i=posHelper[0]; i<posHelper[0]+Manifold::dim; ++i )
+ for(size_t j=posHelper[1]; j<posHelper[1]+Manifold::embeddedDim; ++j )
+ res[i][j] = resLoc[i - posHelper[0]][j-posHelper[1]];
+ posHelper[0] += Manifold::dim;
+ posHelper[1] += Manifold::embeddedDim;
+ };
foreachManifold(orthonormalFrameFunctor,result,*this);
return result;
}
@@ -409,14 +409,14 @@ namespace Dune::GFE
{
CoordinateType returnValue;
auto globalCoordinatesFunctor =[] (auto& argsTuple, std::array<std::size_t,2>& posHelper, const auto& i)
- {
- auto& res = std::get<0>(argsTuple);
- const auto& p = std::get<1>(argsTuple)[i];
- const auto vLoc = p.globalCoordinates();
- using Manifold = std::remove_const_t<typename std::remove_reference_t<decltype(p)> >;
- std::copy(vLoc.begin(),vLoc.end(),res.begin()+posHelper[0]);
- posHelper[0] += Manifold::embeddedDim;
- };
+ {
+ auto& res = std::get<0>(argsTuple);
+ const auto& p = std::get<1>(argsTuple)[i];
+ const auto vLoc = p.globalCoordinates();
+ using Manifold = std::remove_const_t<typename std::remove_reference_t<decltype(p)> >;
+ std::copy(vLoc.begin(),vLoc.end(),res.begin()+posHelper[0]);
+ posHelper[0] += Manifold::embeddedDim;
+ };
foreachManifold(globalCoordinatesFunctor,returnValue,*this);
return returnValue;
}
@@ -478,11 +478,11 @@ namespace Dune::GFE
auto argsTuple = std::forward_as_tuple(args ...);
std::array<std::size_t,2> posHelper({0,0});
Dune::Hybrid::forEach(Dune::Hybrid::integralRange(IC<numTS>()),[&](auto&& i) {
- functor(argsTuple,posHelper,i);
+ functor(argsTuple,posHelper,i);
});
}
std::tuple<TargetSpaces ...> data_;
-};
+ };
}
#endif
diff --git a/dune/gfe/spaces/quaternion.hh b/dune/gfe/spaces/quaternion.hh
index 3ac4ab1b..9d67dc5b 100644
--- a/dune/gfe/spaces/quaternion.hh
+++ b/dune/gfe/spaces/quaternion.hh
@@ -12,152 +12,152 @@ class Quaternion : public Dune::FieldVector<T,4>
{
public:
- /** \brief Default constructor */
- Quaternion() {}
-
- /** \brief Constructor with the four components */
- Quaternion(const T& a, const T& b, const T& c, const T& d) {
-
- (*this)[0] = a;
- (*this)[1] = b;
- (*this)[2] = c;
- (*this)[3] = d;
-
- }
-
- /** \brief Constructor from a single scalar */
- Quaternion(const T& a) : Dune::FieldVector<T,4>(a) {}
-
- /** \brief Copy constructor */
- Quaternion(const Dune::FieldVector<T,4>& other) : Dune::FieldVector<T,4>(other) {}
-
- /** \brief Assignment from a scalar */
- Quaternion<T>& operator=(const T& v) {
- for (int i=0; i<4; i++)
- (*this)[i] = v;
- return (*this);
- }
-
- /** \brief Return the identity element */
- static Quaternion<T> identity() {
- Quaternion<T> id;
- id[0] = 0;
- id[1] = 0;
- id[2] = 0;
- id[3] = 1;
- return id;
- }
-
- /** \brief Right quaternion multiplication */
- Quaternion<T> mult(const Quaternion<T>& other) const {
- Quaternion<T> q;
- q[0] = (*this)[3]*other[0] - (*this)[2]*other[1] + (*this)[1]*other[2] + (*this)[0]*other[3];
- q[1] = (*this)[2]*other[0] + (*this)[3]*other[1] - (*this)[0]*other[2] + (*this)[1]*other[3];
- q[2] = - (*this)[1]*other[0] + (*this)[0]*other[1] + (*this)[3]*other[2] + (*this)[2]*other[3];
- q[3] = - (*this)[0]*other[0] - (*this)[1]*other[1] - (*this)[2]*other[2] + (*this)[3]*other[3];
-
- return q;
+ /** \brief Default constructor */
+ Quaternion() {}
+
+ /** \brief Constructor with the four components */
+ Quaternion(const T& a, const T& b, const T& c, const T& d) {
+
+ (*this)[0] = a;
+ (*this)[1] = b;
+ (*this)[2] = c;
+ (*this)[3] = d;
+
+ }
+
+ /** \brief Constructor from a single scalar */
+ Quaternion(const T& a) : Dune::FieldVector<T,4>(a) {}
+
+ /** \brief Copy constructor */
+ Quaternion(const Dune::FieldVector<T,4>& other) : Dune::FieldVector<T,4>(other) {}
+
+ /** \brief Assignment from a scalar */
+ Quaternion<T>& operator=(const T& v) {
+ for (int i=0; i<4; i++)
+ (*this)[i] = v;
+ return (*this);
+ }
+
+ /** \brief Return the identity element */
+ static Quaternion<T> identity() {
+ Quaternion<T> id;
+ id[0] = 0;
+ id[1] = 0;
+ id[2] = 0;
+ id[3] = 1;
+ return id;
+ }
+
+ /** \brief Right quaternion multiplication */
+ Quaternion<T> mult(const Quaternion<T>& other) const {
+ Quaternion<T> q;
+ q[0] = (*this)[3]*other[0] - (*this)[2]*other[1] + (*this)[1]*other[2] + (*this)[0]*other[3];
+ q[1] = (*this)[2]*other[0] + (*this)[3]*other[1] - (*this)[0]*other[2] + (*this)[1]*other[3];
+ q[2] = - (*this)[1]*other[0] + (*this)[0]*other[1] + (*this)[3]*other[2] + (*this)[2]*other[3];
+ q[3] = - (*this)[0]*other[0] - (*this)[1]*other[1] - (*this)[2]*other[2] + (*this)[3]*other[3];
+
+ return q;
+ }
+ /** \brief Return the tripel of director vectors represented by a unit quaternion
+
+ The formulas are taken from Dichmann, Li, Maddocks, (2.6.4), (2.6.5), (2.6.6)
+ */
+ Dune::FieldVector<T,3> director(int i) const {
+
+ Dune::FieldVector<T,3> d;
+ const Dune::FieldVector<T,4>& q = *this; // simpler notation
+
+ if (i==0) {
+ d[0] = q[0]*q[0] - q[1]*q[1] - q[2]*q[2] + q[3]*q[3];
+ d[1] = 2 * (q[0]*q[1] + q[2]*q[3]);
+ d[2] = 2 * (q[0]*q[2] - q[1]*q[3]);
+ } else if (i==1) {
+ d[0] = 2 * (q[0]*q[1] - q[2]*q[3]);
+ d[1] = -q[0]*q[0] + q[1]*q[1] - q[2]*q[2] + q[3]*q[3];
+ d[2] = 2 * (q[1]*q[2] + q[0]*q[3]);
+ } else if (i==2) {
+ d[0] = 2 * (q[0]*q[2] + q[1]*q[3]);
+ d[1] = 2 * (q[1]*q[2] - q[0]*q[3]);
+ d[2] = -q[0]*q[0] - q[1]*q[1] + q[2]*q[2] + q[3]*q[3];
+ } else
+ DUNE_THROW(Dune::Exception, "Nonexisting director " << i << " requested!");
+
+ return d;
+ }
+
+ /** \brief Turn quaternion into a unit quaternion by dividing by its Euclidean norm */
+ void normalize() {
+ (*this) /= this->two_norm();
+ }
+
+ Dune::FieldVector<double,3> rotate(const Dune::FieldVector<double,3>& v) const {
+
+ Dune::FieldVector<double,3> result;
+ Dune::FieldVector<double,3> d0 = director(0);
+ Dune::FieldVector<double,3> d1 = director(1);
+ Dune::FieldVector<double,3> d2 = director(2);
+
+ for (int i=0; i<3; i++)
+ result[i] = v[0]*d0[i] + v[1]*d1[i] + v[2]*d2[i];
+
+ return result;
+ }
+
+ /** \brief Conjugate the quaternion */
+ void conjugate() {
+
+ (*this)[0] *= -1;
+ (*this)[1] *= -1;
+ (*this)[2] *= -1;
+
+ }
+
+ /** \brief Invert the quaternion */
+ void invert() {
+
+ conjugate();
+ (*this) /= this->two_norm2();
+
+ }
+
+ /** \brief Yield the inverse quaternion */
+ Quaternion<T> inverse() const {
+
+ Quaternion<T> result = *this;
+ result.invert();
+ return result;
+ }
+
+ /** \brief Create three vectors which form an orthonormal basis of \mathbb{H} together
+ with this one.
+
+ This is used to compute the strain in rod problems.
+ See: Dichmann, Li, Maddocks, 'Hamiltonian Formulations and Symmetries in
+ Rod Mechanics', page 83
+ */
+ Quaternion<T> B(int m) const {
+ assert(m>=0 && m<3);
+ Quaternion<T> r;
+ if (m==0) {
+ r[0] = (*this)[3];
+ r[1] = (*this)[2];
+ r[2] = -(*this)[1];
+ r[3] = -(*this)[0];
+ } else if (m==1) {
+ r[0] = -(*this)[2];
+ r[1] = (*this)[3];
+ r[2] = (*this)[0];
+ r[3] = -(*this)[1];
+ } else {
+ r[0] = (*this)[1];
+ r[1] = -(*this)[0];
+ r[2] = (*this)[3];
+ r[3] = -(*this)[2];
}
- /** \brief Return the tripel of director vectors represented by a unit quaternion
-
- The formulas are taken from Dichmann, Li, Maddocks, (2.6.4), (2.6.5), (2.6.6)
- */
- Dune::FieldVector<T,3> director(int i) const {
-
- Dune::FieldVector<T,3> d;
- const Dune::FieldVector<T,4>& q = *this; // simpler notation
-
- if (i==0) {
- d[0] = q[0]*q[0] - q[1]*q[1] - q[2]*q[2] + q[3]*q[3];
- d[1] = 2 * (q[0]*q[1] + q[2]*q[3]);
- d[2] = 2 * (q[0]*q[2] - q[1]*q[3]);
- } else if (i==1) {
- d[0] = 2 * (q[0]*q[1] - q[2]*q[3]);
- d[1] = -q[0]*q[0] + q[1]*q[1] - q[2]*q[2] + q[3]*q[3];
- d[2] = 2 * (q[1]*q[2] + q[0]*q[3]);
- } else if (i==2) {
- d[0] = 2 * (q[0]*q[2] + q[1]*q[3]);
- d[1] = 2 * (q[1]*q[2] - q[0]*q[3]);
- d[2] = -q[0]*q[0] - q[1]*q[1] + q[2]*q[2] + q[3]*q[3];
- } else
- DUNE_THROW(Dune::Exception, "Nonexisting director " << i << " requested!");
-
- return d;
- }
-
- /** \brief Turn quaternion into a unit quaternion by dividing by its Euclidean norm */
- void normalize() {
- (*this) /= this->two_norm();
- }
-
- Dune::FieldVector<double,3> rotate(const Dune::FieldVector<double,3>& v) const {
- Dune::FieldVector<double,3> result;
- Dune::FieldVector<double,3> d0 = director(0);
- Dune::FieldVector<double,3> d1 = director(1);
- Dune::FieldVector<double,3> d2 = director(2);
+ return r;
+ }
- for (int i=0; i<3; i++)
- result[i] = v[0]*d0[i] + v[1]*d1[i] + v[2]*d2[i];
-
- return result;
- }
-
- /** \brief Conjugate the quaternion */
- void conjugate() {
-
- (*this)[0] *= -1;
- (*this)[1] *= -1;
- (*this)[2] *= -1;
-
- }
-
- /** \brief Invert the quaternion */
- void invert() {
-
- conjugate();
- (*this) /= this->two_norm2();
-
- }
-
- /** \brief Yield the inverse quaternion */
- Quaternion<T> inverse() const {
-
- Quaternion<T> result = *this;
- result.invert();
- return result;
- }
-
- /** \brief Create three vectors which form an orthonormal basis of \mathbb{H} together
- with this one.
-
- This is used to compute the strain in rod problems.
- See: Dichmann, Li, Maddocks, 'Hamiltonian Formulations and Symmetries in
- Rod Mechanics', page 83
- */
- Quaternion<T> B(int m) const {
- assert(m>=0 && m<3);
- Quaternion<T> r;
- if (m==0) {
- r[0] = (*this)[3];
- r[1] = (*this)[2];
- r[2] = -(*this)[1];
- r[3] = -(*this)[0];
- } else if (m==1) {
- r[0] = -(*this)[2];
- r[1] = (*this)[3];
- r[2] = (*this)[0];
- r[3] = -(*this)[1];
- } else {
- r[0] = (*this)[1];
- r[1] = -(*this)[0];
- r[2] = (*this)[3];
- r[3] = -(*this)[2];
- }
-
- return r;
- }
-
};
diff --git a/dune/gfe/spaces/realtuple.hh b/dune/gfe/spaces/realtuple.hh
index 1a3f3d07..92a674e3 100644
--- a/dune/gfe/spaces/realtuple.hh
+++ b/dune/gfe/spaces/realtuple.hh
@@ -11,246 +11,246 @@
/** \brief Implement a tuple of real numbers as a Riemannian manifold
-Currently this class only exists for testing purposes.
-*/
+ Currently this class only exists for testing purposes.
+ */
template <class T, int N>
class RealTuple
{
public:
- typedef T ctype;
- typedef T field_type;
-
- /** \brief The type used for global coordinates */
- typedef Dune::FieldVector<T,N> CoordinateType;
-
- /** \brief Dimension of the manifold formed by unit vectors */
- static const int dim = N;
-
- /** \brief Dimension of the Euclidean space the manifold is embedded in */
- static const int embeddedDim = N;
-
- typedef Dune::FieldVector<T,N> EmbeddedTangentVector;
-
- typedef Dune::FieldVector<T,N> TangentVector;
-
- /** \brief The global convexity radius of the Euclidean space */
- static constexpr double convexityRadius = std::numeric_limits<double>::infinity();
-
- /** \brief The return type of the derivativeOfProjection method */
- typedef Dune::ScaledIdentityMatrix<T, N> DerivativeOfProjection;
-
- /** \brief Default constructor */
- RealTuple()
- {}
-
- /** \brief Construction from a scalar */
- RealTuple(T v)
- {
- data_ = v;
- }
-
- /** \brief Copy constructor */
- RealTuple(const RealTuple<T,N>& other)
- : data_(other.data_)
- {}
-
- /** \brief Constructor from FieldVector*/
- RealTuple(const Dune::FieldVector<T,N>& other)
- : data_(other)
- {}
-
- RealTuple& operator=(const Dune::FieldVector<T,N>& other) {
- data_ = other;
- return *this;
- }
-
- RealTuple& operator-=(const Dune::FieldVector<T,N>& other) {
- data_ -= other;
- return *this;
- }
-
- template <class T2>
- RealTuple& operator-=(const RealTuple<T2,N>& other) {
- data_ -= other.data_;
- return *this;
- }
-
- /** \brief Assignment from RealTuple with different type -- used for automatic differentiation with ADOL-C */
- template <class T2>
- RealTuple& operator <<= (const RealTuple<T2,N>& other) {
- for (size_t i=0; i<N; i++)
- data_[i] <<= other.data_[i];
- return *this;
- }
-
- /** \brief Const random-access operator*/
- T operator[] (const size_t indexVariable ) const {
- return data_[indexVariable];
- }
-
- /** \brief Rebind the RealTuple to another coordinate type */
- template<class U>
- struct rebind
- {
- typedef RealTuple<U,N> other;
- };
-
- /** \brief The exponention map */
- static RealTuple exp(const RealTuple& p, const TangentVector& v) {
- return RealTuple(p.data_+v);
- }
-
- /** \brief Geodesic distance between two points
-
- Simply the Euclidean distance */
- static T distance(const RealTuple& a, const RealTuple& b) {
- return log(a.data_,b.data_).two_norm();
- }
-
- /** \brief The logarithmic map
- *
- * \result A vector in the tangent space of a, viz: b-a
- * */
- static auto log(const RealTuple& a, const RealTuple& b) {
- return b.data_ - a.data_;
- }
+ typedef T ctype;
+ typedef T field_type;
+
+ /** \brief The type used for global coordinates */
+ typedef Dune::FieldVector<T,N> CoordinateType;
+
+ /** \brief Dimension of the manifold formed by unit vectors */
+ static const int dim = N;
+
+ /** \brief Dimension of the Euclidean space the manifold is embedded in */
+ static const int embeddedDim = N;
+
+ typedef Dune::FieldVector<T,N> EmbeddedTangentVector;
+
+ typedef Dune::FieldVector<T,N> TangentVector;
+
+ /** \brief The global convexity radius of the Euclidean space */
+ static constexpr double convexityRadius = std::numeric_limits<double>::infinity();
+
+ /** \brief The return type of the derivativeOfProjection method */
+ typedef Dune::ScaledIdentityMatrix<T, N> DerivativeOfProjection;
+
+ /** \brief Default constructor */
+ RealTuple()
+ {}
+
+ /** \brief Construction from a scalar */
+ RealTuple(T v)
+ {
+ data_ = v;
+ }
+
+ /** \brief Copy constructor */
+ RealTuple(const RealTuple<T,N>& other)
+ : data_(other.data_)
+ {}
+
+ /** \brief Constructor from FieldVector*/
+ RealTuple(const Dune::FieldVector<T,N>& other)
+ : data_(other)
+ {}
+
+ RealTuple& operator=(const Dune::FieldVector<T,N>& other) {
+ data_ = other;
+ return *this;
+ }
+
+ RealTuple& operator-=(const Dune::FieldVector<T,N>& other) {
+ data_ -= other;
+ return *this;
+ }
+
+ template <class T2>
+ RealTuple& operator-=(const RealTuple<T2,N>& other) {
+ data_ -= other.data_;
+ return *this;
+ }
+
+ /** \brief Assignment from RealTuple with different type -- used for automatic differentiation with ADOL-C */
+ template <class T2>
+ RealTuple& operator <<= (const RealTuple<T2,N>& other) {
+ for (size_t i=0; i<N; i++)
+ data_[i] <<= other.data_[i];
+ return *this;
+ }
+
+ /** \brief Const random-access operator*/
+ T operator[] (const size_t indexVariable ) const {
+ return data_[indexVariable];
+ }
+
+ /** \brief Rebind the RealTuple to another coordinate type */
+ template<class U>
+ struct rebind
+ {
+ typedef RealTuple<U,N> other;
+ };
+
+ /** \brief The exponention map */
+ static RealTuple exp(const RealTuple& p, const TangentVector& v) {
+ return RealTuple(p.data_+v);
+ }
+
+ /** \brief Geodesic distance between two points
+
+ Simply the Euclidean distance */
+ static T distance(const RealTuple& a, const RealTuple& b) {
+ return log(a.data_,b.data_).two_norm();
+ }
+
+ /** \brief The logarithmic map
+ *
+ * \result A vector in the tangent space of a, viz: b-a
+ * */
+ static auto log(const RealTuple& a, const RealTuple& b) {
+ return b.data_ - a.data_;
+ }
#if ADOLC_ADOUBLE_H
- /** \brief Geodesic distance squared between two points
-
- Simply the Euclidean distance squared */
- static adouble distanceSquared(const RealTuple<double,N>& a, const RealTuple<adouble,N>& b) {
- adouble result(0.0);
- for (int i=0; i<N; i++)
- result += (a.globalCoordinates()[i] - b.globalCoordinates()[i]) * (a.globalCoordinates()[i] - b.globalCoordinates()[i]);
- return result;
- }
+ /** \brief Geodesic distance squared between two points
+
+ Simply the Euclidean distance squared */
+ static adouble distanceSquared(const RealTuple<double,N>& a, const RealTuple<adouble,N>& b) {
+ adouble result(0.0);
+ for (int i=0; i<N; i++)
+ result += (a.globalCoordinates()[i] - b.globalCoordinates()[i]) * (a.globalCoordinates()[i] - b.globalCoordinates()[i]);
+ return result;
+ }
#endif
- /** \brief Compute the gradient of the squared distance function keeping the first argument fixed
-
- Unlike the distance itself the squared distance is differentiable at zero
- */
- static EmbeddedTangentVector derivativeOfDistanceSquaredWRTSecondArgument(const RealTuple& a, const RealTuple& b) {
- EmbeddedTangentVector result = a.data_;
- result -= b.data_;
- result *= -2;
- return result;
- }
-
- /** \brief Compute the Hessian of the squared distance function keeping the first argument fixed
+ /** \brief Compute the gradient of the squared distance function keeping the first argument fixed
+
+ Unlike the distance itself the squared distance is differentiable at zero
+ */
+ static EmbeddedTangentVector derivativeOfDistanceSquaredWRTSecondArgument(const RealTuple& a, const RealTuple& b) {
+ EmbeddedTangentVector result = a.data_;
+ result -= b.data_;
+ result *= -2;
+ return result;
+ }
+
+ /** \brief Compute the Hessian of the squared distance function keeping the first argument fixed
- Unlike the distance itself the squared distance is differentiable at zero
- */
- static Dune::SymmetricMatrix<T,N> secondDerivativeOfDistanceSquaredWRTSecondArgument(const RealTuple& a, const RealTuple& b) {
-
- Dune::SymmetricMatrix<T,N> result;
- for (int i=0; i<N; i++)
- for (int j=0; j<=i; j++)
- result(i,j) = 2*(i==j);
-
- return result;
- }
-
- /** \brief Compute the mixed second derivate \partial d^2 / \partial da db
-
- Unlike the distance itself the squared distance is differentiable at zero
- */
- static Dune::FieldMatrix<T,N,N> secondDerivativeOfDistanceSquaredWRTFirstAndSecondArgument(const RealTuple& a, const RealTuple& b) {
-
- Dune::FieldMatrix<T,N,N> result;
- for (int i=0; i<N; i++)
- for (int j=0; j<N; j++)
- result[i][j] = -2*(i==j);
-
- return result;
- }
-
- /** \brief Compute the mixed third derivative \partial d^3 / \partial db^3
-
- The result is the constant zero-tensor.
- */
- static Tensor3<T,N,N,N> thirdDerivativeOfDistanceSquaredWRTSecondArgument(const RealTuple& a, const RealTuple& b) {
- return Tensor3<T,N,N,N>(0);
- }
-
- /** \brief Compute the mixed third derivative \partial d^3 / \partial da db^2
-
- The result is the constant zero-tensor.
- */
- static Tensor3<T,N,N,N> thirdDerivativeOfDistanceSquaredWRTFirst1AndSecond2Argument(const RealTuple& a, const RealTuple& b) {
- return Tensor3<T,N,N,N>(0);
- }
-
- /** \brief Project tangent vector of R^n onto the tangent space */
- EmbeddedTangentVector projectOntoTangentSpace(const EmbeddedTangentVector& v) const {
- return v;
- }
-
- /** \brief Project tangent vector of R^n onto the normal space space */
- EmbeddedTangentVector projectOntoNormalSpace(const EmbeddedTangentVector& v) const {
- return EmbeddedTangentVector(0);
- }
-
- /** \brief The Weingarten map */
- EmbeddedTangentVector weingarten(const EmbeddedTangentVector& z, const EmbeddedTangentVector& v) const {
- return EmbeddedTangentVector(0);
- }
-
- /** \brief Projection from the embedding space onto the manifold
- *
- * For RealTuples this is simply the identity map
- */
- static RealTuple<T,N> projectOnto(const CoordinateType& p)
- {
- return RealTuple<T,N>(p);
- }
-
- /** \brief Derivative of the projection from the embedding space onto the manifold
- *
- * For RealTuples this is simply the identity
- */
- static DerivativeOfProjection derivativeOfProjection(const Dune::FieldVector<T,N>& p)
- {
- return Dune::ScaledIdentityMatrix<T,N>(1.0);
- }
-
- /** \brief The global coordinates, if you really want them */
- const Dune::FieldVector<T,N>& globalCoordinates() const {
- return data_;
- }
-
- Dune::FieldVector<T,N>& globalCoordinates() {
- return data_;
- }
-
-
- /** \brief Compute an orthonormal basis of the tangent space of R^n.
-
- In general this frame field, may of course not be continuous, but for RealTuples it is.
- */
- Dune::FieldMatrix<T,N,N> orthonormalFrame() const {
-
- Dune::FieldMatrix<T,N,N> result;
-
- for (int i=0; i<N; i++)
- for (int j=0; j<N; j++)
- result[i][j] = (i==j);
- return result;
- }
-
- /** \brief Write LocalKey object to output stream */
- friend std::ostream& operator<< (std::ostream& s, const RealTuple& realTuple)
- {
- return s << realTuple.data_;
- }
+ Unlike the distance itself the squared distance is differentiable at zero
+ */
+ static Dune::SymmetricMatrix<T,N> secondDerivativeOfDistanceSquaredWRTSecondArgument(const RealTuple& a, const RealTuple& b) {
+
+ Dune::SymmetricMatrix<T,N> result;
+ for (int i=0; i<N; i++)
+ for (int j=0; j<=i; j++)
+ result(i,j) = 2*(i==j);
+
+ return result;
+ }
+
+ /** \brief Compute the mixed second derivate \partial d^2 / \partial da db
+
+ Unlike the distance itself the squared distance is differentiable at zero
+ */
+ static Dune::FieldMatrix<T,N,N> secondDerivativeOfDistanceSquaredWRTFirstAndSecondArgument(const RealTuple& a, const RealTuple& b) {
+
+ Dune::FieldMatrix<T,N,N> result;
+ for (int i=0; i<N; i++)
+ for (int j=0; j<N; j++)
+ result[i][j] = -2*(i==j);
+
+ return result;
+ }
+
+ /** \brief Compute the mixed third derivative \partial d^3 / \partial db^3
+
+ The result is the constant zero-tensor.
+ */
+ static Tensor3<T,N,N,N> thirdDerivativeOfDistanceSquaredWRTSecondArgument(const RealTuple& a, const RealTuple& b) {
+ return Tensor3<T,N,N,N>(0);
+ }
+
+ /** \brief Compute the mixed third derivative \partial d^3 / \partial da db^2
+
+ The result is the constant zero-tensor.
+ */
+ static Tensor3<T,N,N,N> thirdDerivativeOfDistanceSquaredWRTFirst1AndSecond2Argument(const RealTuple& a, const RealTuple& b) {
+ return Tensor3<T,N,N,N>(0);
+ }
+
+ /** \brief Project tangent vector of R^n onto the tangent space */
+ EmbeddedTangentVector projectOntoTangentSpace(const EmbeddedTangentVector& v) const {
+ return v;
+ }
+
+ /** \brief Project tangent vector of R^n onto the normal space space */
+ EmbeddedTangentVector projectOntoNormalSpace(const EmbeddedTangentVector& v) const {
+ return EmbeddedTangentVector(0);
+ }
+
+ /** \brief The Weingarten map */
+ EmbeddedTangentVector weingarten(const EmbeddedTangentVector& z, const EmbeddedTangentVector& v) const {
+ return EmbeddedTangentVector(0);
+ }
+
+ /** \brief Projection from the embedding space onto the manifold
+ *
+ * For RealTuples this is simply the identity map
+ */
+ static RealTuple<T,N> projectOnto(const CoordinateType& p)
+ {
+ return RealTuple<T,N>(p);
+ }
+
+ /** \brief Derivative of the projection from the embedding space onto the manifold
+ *
+ * For RealTuples this is simply the identity
+ */
+ static DerivativeOfProjection derivativeOfProjection(const Dune::FieldVector<T,N>& p)
+ {
+ return Dune::ScaledIdentityMatrix<T,N>(1.0);
+ }
+
+ /** \brief The global coordinates, if you really want them */
+ const Dune::FieldVector<T,N>& globalCoordinates() const {
+ return data_;
+ }
+
+ Dune::FieldVector<T,N>& globalCoordinates() {
+ return data_;
+ }
+
+
+ /** \brief Compute an orthonormal basis of the tangent space of R^n.
+
+ In general this frame field, may of course not be continuous, but for RealTuples it is.
+ */
+ Dune::FieldMatrix<T,N,N> orthonormalFrame() const {
+
+ Dune::FieldMatrix<T,N,N> result;
+
+ for (int i=0; i<N; i++)
+ for (int j=0; j<N; j++)
+ result[i][j] = (i==j);
+ return result;
+ }
+
+ /** \brief Write LocalKey object to output stream */
+ friend std::ostream& operator<< (std::ostream& s, const RealTuple& realTuple)
+ {
+ return s << realTuple.data_;
+ }
private:
- Dune::FieldVector<T,N> data_;
+ Dune::FieldVector<T,N> data_;
};
diff --git a/dune/gfe/spaces/rigidbodymotion.hh b/dune/gfe/spaces/rigidbodymotion.hh
index c82c2688..e284c18f 100644
--- a/dune/gfe/spaces/rigidbodymotion.hh
+++ b/dune/gfe/spaces/rigidbodymotion.hh
@@ -12,420 +12,420 @@ struct RigidBodyMotion
{
public:
- /** \brief Dimension of manifold */
- static const int dim = N + Rotation<T,N>::dim;
+ /** \brief Dimension of manifold */
+ static const int dim = N + Rotation<T,N>::dim;
- /** \brief Dimension of the embedding space */
- static const int embeddedDim = N + Rotation<T,N>::embeddedDim;
+ /** \brief Dimension of the embedding space */
+ static const int embeddedDim = N + Rotation<T,N>::embeddedDim;
- /** \brief Type of an infinitesimal rigid body motion */
- typedef Dune::FieldVector<T, dim> TangentVector;
+ /** \brief Type of an infinitesimal rigid body motion */
+ typedef Dune::FieldVector<T, dim> TangentVector;
- /** \brief Type of an infinitesimal rigid body motion */
- typedef Dune::FieldVector<T, embeddedDim> EmbeddedTangentVector;
+ /** \brief Type of an infinitesimal rigid body motion */
+ typedef Dune::FieldVector<T, embeddedDim> EmbeddedTangentVector;
- /** \brief The type used for coordinates */
- typedef T ctype;
- typedef T field_type;
+ /** \brief The type used for coordinates */
+ typedef T ctype;
+ typedef T field_type;
- /** \brief The type used for global coordinates */
- typedef Dune::FieldVector<T,embeddedDim> CoordinateType;
+ /** \brief The type used for global coordinates */
+ typedef Dune::FieldVector<T,embeddedDim> CoordinateType;
- /** \brief The global convexity radius of the rigid body motions */
- static constexpr double convexityRadius = Rotation<T,N>::convexityRadius;
+ /** \brief The global convexity radius of the rigid body motions */
+ static constexpr double convexityRadius = Rotation<T,N>::convexityRadius;
- /** \brief Default constructor */
- RigidBodyMotion()
- {}
+ /** \brief Default constructor */
+ RigidBodyMotion()
+ {}
- /** \brief Constructor from a translation and a rotation */
- RigidBodyMotion(const Dune::FieldVector<ctype, N>& translation,
- const Rotation<ctype,N>& rotation)
+ /** \brief Constructor from a translation and a rotation */
+ RigidBodyMotion(const Dune::FieldVector<ctype, N>& translation,
+ const Rotation<ctype,N>& rotation)
: r(translation), q(rotation)
- {}
+ {}
- RigidBodyMotion(const CoordinateType& globalCoordinates)
- {
- for (int i=0; i<N; i++)
- r[i] = globalCoordinates[i];
+ RigidBodyMotion(const CoordinateType& globalCoordinates)
+ {
+ for (int i=0; i<N; i++)
+ r[i] = globalCoordinates[i];
- for (int i=N; i<embeddedDim; i++)
- q[i-N] = globalCoordinates[i];
+ for (int i=N; i<embeddedDim; i++)
+ q[i-N] = globalCoordinates[i];
- // Turn this into a unit quaternion if it isn't already
- q.normalize();
- }
+ // Turn this into a unit quaternion if it isn't already
+ q.normalize();
+ }
- /** \brief Assignment from RigidBodyMotion with different type -- used for automatic differentiation with ADOL-C */
- template <class T2>
- RigidBodyMotion& operator <<= (const RigidBodyMotion<T2,N>& other) {
- for (int i=0; i<N; i++)
- r[i] <<= other.r[i];
- q <<= other.q;
- return *this;
- }
+ /** \brief Assignment from RigidBodyMotion with different type -- used for automatic differentiation with ADOL-C */
+ template <class T2>
+ RigidBodyMotion& operator <<= (const RigidBodyMotion<T2,N>& other) {
+ for (int i=0; i<N; i++)
+ r[i] <<= other.r[i];
+ q <<= other.q;
+ return *this;
+ }
- /** \brief Rebind the RigidBodyMotion to another coordinate type */
- template<class U>
- struct rebind
- {
- typedef RigidBodyMotion<U,N> other;
- };
+ /** \brief Rebind the RigidBodyMotion to another coordinate type */
+ template<class U>
+ struct rebind
+ {
+ typedef RigidBodyMotion<U,N> other;
+ };
- /** \brief The exponential map from a given point $p \in SE(d)$.
+ /** \brief The exponential map from a given point $p \in SE(d)$.
Why the template parameter? Well, it should work with both TangentVector and EmbeddedTangentVector.
In general these differ and we could just have two exp methods. However in 2d they do _not_ differ,
and then the compiler complains about having two methods with the same signature.
- */
- template <class TVector>
- static RigidBodyMotion<ctype,N> exp(const RigidBodyMotion<ctype,N>& p, const TVector& v) {
-
- RigidBodyMotion<ctype,N> result;
-
- // Add translational correction
- for (int i=0; i<N; i++)
- result.r[i] = p.r[i] + v[i];
-
- // Add rotational correction
- typedef typename std::conditional<std::is_same<TVector,TangentVector>::value,
- typename Rotation<ctype,N>::TangentVector,
- typename Rotation<ctype,N>::EmbeddedTangentVector>::type RotationTangentVector;
- RotationTangentVector qCorr;
- for (int i=0; i<RotationTangentVector::dimension; i++)
- qCorr[i] = v[N+i];
-
- result.q = Rotation<ctype,N>::exp(p.q, qCorr);
- return result;
- }
+ */
+ template <class TVector>
+ static RigidBodyMotion<ctype,N> exp(const RigidBodyMotion<ctype,N>& p, const TVector& v) {
+
+ RigidBodyMotion<ctype,N> result;
+
+ // Add translational correction
+ for (int i=0; i<N; i++)
+ result.r[i] = p.r[i] + v[i];
+
+ // Add rotational correction
+ typedef typename std::conditional<std::is_same<TVector,TangentVector>::value,
+ typename Rotation<ctype,N>::TangentVector,
+ typename Rotation<ctype,N>::EmbeddedTangentVector>::type RotationTangentVector;
+ RotationTangentVector qCorr;
+ for (int i=0; i<RotationTangentVector::dimension; i++)
+ qCorr[i] = v[N+i];
+
+ result.q = Rotation<ctype,N>::exp(p.q, qCorr);
+ return result;
+ }
- /** \brief Compute difference vector from a to b on the tangent space of a */
- static EmbeddedTangentVector log(const RigidBodyMotion<ctype,N>& a,
- const RigidBodyMotion<ctype,N>& b)
- {
- EmbeddedTangentVector result;
+ /** \brief Compute difference vector from a to b on the tangent space of a */
+ static EmbeddedTangentVector log(const RigidBodyMotion<ctype,N>& a,
+ const RigidBodyMotion<ctype,N>& b)
+ {
+ EmbeddedTangentVector result;
- // Usual linear difference
- for (int i=0; i<N; i++)
- result[i] = b.r[i] - a.r[i];
+ // Usual linear difference
+ for (int i=0; i<N; i++)
+ result[i] = b.r[i] - a.r[i];
- // Subtract orientations on the tangent space of 'a'
- typename Rotation<ctype,N>::EmbeddedTangentVector v = Rotation<ctype,N>::log(a.q, b.q);
+ // Subtract orientations on the tangent space of 'a'
+ typename Rotation<ctype,N>::EmbeddedTangentVector v = Rotation<ctype,N>::log(a.q, b.q);
- // Compute difference on T_a SO(3)
- for (int i=0; i<Rotation<ctype,N>::EmbeddedTangentVector::dimension; i++)
- result[i+N] = v[i];
+ // Compute difference on T_a SO(3)
+ for (int i=0; i<Rotation<ctype,N>::EmbeddedTangentVector::dimension; i++)
+ result[i+N] = v[i];
- return result;
- }
+ return result;
+ }
- /** \brief Compute geodesic distance from a to b */
- static T distance(const RigidBodyMotion<ctype,N>& a, const RigidBodyMotion<ctype,N>& b) {
+ /** \brief Compute geodesic distance from a to b */
+ static T distance(const RigidBodyMotion<ctype,N>& a, const RigidBodyMotion<ctype,N>& b) {
- T euclideanDistanceSquared = (a.r - b.r).two_norm2();
+ T euclideanDistanceSquared = (a.r - b.r).two_norm2();
- T rotationDistance = Rotation<ctype,N>::distance(a.q, b.q);
+ T rotationDistance = Rotation<ctype,N>::distance(a.q, b.q);
- return std::sqrt(euclideanDistanceSquared + rotationDistance*rotationDistance);
- }
+ return std::sqrt(euclideanDistanceSquared + rotationDistance*rotationDistance);
+ }
- /** \brief Compute difference vector from a to b on the tangent space of a
+ /** \brief Compute difference vector from a to b on the tangent space of a
- * \warning The method is buggy! See https://gitlab.mn.tu-dresden.de/osander/dune-gfe/-/merge_requests/2
- * \deprecated Use the log method instead!
- */
- [[deprecated("Use RigidBodyMotion::log instead of RigidBodyMotion::difference!")]]
- static TangentVector difference(const RigidBodyMotion<ctype,N>& a,
- const RigidBodyMotion<ctype,N>& b) {
+ * \warning The method is buggy! See https://gitlab.mn.tu-dresden.de/osander/dune-gfe/-/merge_requests/2
+ * \deprecated Use the log method instead!
+ */
+ [[deprecated("Use RigidBodyMotion::log instead of RigidBodyMotion::difference!")]]
+ static TangentVector difference(const RigidBodyMotion<ctype,N>& a,
+ const RigidBodyMotion<ctype,N>& b) {
- TangentVector result;
+ TangentVector result;
- // Usual linear difference
- for (int i=0; i<N; i++)
- result[i] = a.r[i] - b.r[i];
+ // Usual linear difference
+ for (int i=0; i<N; i++)
+ result[i] = a.r[i] - b.r[i];
- // Subtract orientations on the tangent space of 'a'
- typename Rotation<ctype,N>::TangentVector v = Rotation<ctype,N>::difference(a.q, b.q).axial();
+ // Subtract orientations on the tangent space of 'a'
+ typename Rotation<ctype,N>::TangentVector v = Rotation<ctype,N>::difference(a.q, b.q).axial();
- // Compute difference on T_a SO(3)
- for (int i=0; i<Rotation<ctype,N>::TangentVector::dimension; i++)
- result[i+N] = v[i];
+ // Compute difference on T_a SO(3)
+ for (int i=0; i<Rotation<ctype,N>::TangentVector::dimension; i++)
+ result[i+N] = v[i];
- return result;
- }
+ return result;
+ }
- static EmbeddedTangentVector derivativeOfDistanceSquaredWRTSecondArgument(const RigidBodyMotion<ctype,N>& a,
- const RigidBodyMotion<ctype,N>& b) {
+ static EmbeddedTangentVector derivativeOfDistanceSquaredWRTSecondArgument(const RigidBodyMotion<ctype,N>& a,
+ const RigidBodyMotion<ctype,N>& b) {
- // linear part
- Dune::FieldVector<ctype,N> linearDerivative = a.r;
- linearDerivative -= b.r;
- linearDerivative *= -2;
+ // linear part
+ Dune::FieldVector<ctype,N> linearDerivative = a.r;
+ linearDerivative -= b.r;
+ linearDerivative *= -2;
- // rotation part
- typename Rotation<ctype,N>::EmbeddedTangentVector rotationDerivative
- = Rotation<ctype,N>::derivativeOfDistanceSquaredWRTSecondArgument(a.q, b.q);
+ // rotation part
+ typename Rotation<ctype,N>::EmbeddedTangentVector rotationDerivative
+ = Rotation<ctype,N>::derivativeOfDistanceSquaredWRTSecondArgument(a.q, b.q);
- return concat(linearDerivative, rotationDerivative);
- }
+ return concat(linearDerivative, rotationDerivative);
+ }
- /** \brief Compute the Hessian of the squared distance function keeping the first argument fixed */
- static Dune::SymmetricMatrix<T,embeddedDim> secondDerivativeOfDistanceSquaredWRTSecondArgument(const RigidBodyMotion<ctype,N> & p, const RigidBodyMotion<ctype,N> & q)
+ /** \brief Compute the Hessian of the squared distance function keeping the first argument fixed */
+ static Dune::SymmetricMatrix<T,embeddedDim> secondDerivativeOfDistanceSquaredWRTSecondArgument(const RigidBodyMotion<ctype,N> & p, const RigidBodyMotion<ctype,N> & q)
+ {
+ Dune::SymmetricMatrix<T,embeddedDim> result;
+
+ // The linear part
+ Dune::SymmetricMatrix<T,N> linearPart = RealTuple<T,N>::secondDerivativeOfDistanceSquaredWRTSecondArgument(p.r,q.r);
+ for (int i=0; i<N; i++)
+ for (int j=0; j<=i; j++)
+ result(i,j) = linearPart(i,j);
+
+ // The rotation part
+ Dune::SymmetricMatrix<T,Rotation<T,N>::embeddedDim> rotationPart
+ = Rotation<ctype,N>::secondDerivativeOfDistanceSquaredWRTSecondArgument(p.q,q.q);
+ for (int i=0; i<Rotation<T,N>::embeddedDim; i++)
{
- Dune::SymmetricMatrix<T,embeddedDim> result;
-
- // The linear part
- Dune::SymmetricMatrix<T,N> linearPart = RealTuple<T,N>::secondDerivativeOfDistanceSquaredWRTSecondArgument(p.r,q.r);
- for (int i=0; i<N; i++)
- for (int j=0; j<=i; j++)
- result(i,j) = linearPart(i,j);
-
- // The rotation part
- Dune::SymmetricMatrix<T,Rotation<T,N>::embeddedDim> rotationPart
- = Rotation<ctype,N>::secondDerivativeOfDistanceSquaredWRTSecondArgument(p.q,q.q);
- for (int i=0; i<Rotation<T,N>::embeddedDim; i++)
- {
- for (int j=0; j<N; j++)
- result(N+i,j) = 0;
- for (int j=0; j<=i; j++)
- result(N+i,N+j) = rotationPart(i,j);
- }
-
- return result;
+ for (int j=0; j<N; j++)
+ result(N+i,j) = 0;
+ for (int j=0; j<=i; j++)
+ result(N+i,N+j) = rotationPart(i,j);
}
- /** \brief Compute the mixed second derivate \partial d^2 / \partial da db
+ return result;
+ }
- Unlike the distance itself the squared distance is differentiable at zero
- */
- static Dune::FieldMatrix<T,embeddedDim,embeddedDim> secondDerivativeOfDistanceSquaredWRTFirstAndSecondArgument(const RigidBodyMotion<ctype,N> & p, const RigidBodyMotion<ctype,N> & q)
- {
- Dune::FieldMatrix<T,embeddedDim,embeddedDim> result(0);
-
- // The linear part
- Dune::FieldMatrix<T,N,N> linearPart = RealTuple<T,N>::secondDerivativeOfDistanceSquaredWRTFirstAndSecondArgument(p.r,q.r);
- for (int i=0; i<N; i++)
- for (int j=0; j<N; j++)
- result[i][j] = linearPart[i][j];
-
- // The rotation part
- Dune::FieldMatrix<T,Rotation<T,N>::embeddedDim,Rotation<T,N>::embeddedDim> rotationPart
- = Rotation<ctype,N>::secondDerivativeOfDistanceSquaredWRTFirstAndSecondArgument(p.q,q.q);
- for (int i=0; i<Rotation<T,N>::embeddedDim; i++)
- for (int j=0; j<Rotation<T,N>::embeddedDim; j++)
- result[N+i][N+j] = rotationPart[i][j];
-
- return result;
- }
+ /** \brief Compute the mixed second derivate \partial d^2 / \partial da db
- /** \brief Compute the third derivative \partial d^3 / \partial dq^3
+ Unlike the distance itself the squared distance is differentiable at zero
+ */
+ static Dune::FieldMatrix<T,embeddedDim,embeddedDim> secondDerivativeOfDistanceSquaredWRTFirstAndSecondArgument(const RigidBodyMotion<ctype,N> & p, const RigidBodyMotion<ctype,N> & q)
+ {
+ Dune::FieldMatrix<T,embeddedDim,embeddedDim> result(0);
+
+ // The linear part
+ Dune::FieldMatrix<T,N,N> linearPart = RealTuple<T,N>::secondDerivativeOfDistanceSquaredWRTFirstAndSecondArgument(p.r,q.r);
+ for (int i=0; i<N; i++)
+ for (int j=0; j<N; j++)
+ result[i][j] = linearPart[i][j];
+
+ // The rotation part
+ Dune::FieldMatrix<T,Rotation<T,N>::embeddedDim,Rotation<T,N>::embeddedDim> rotationPart
+ = Rotation<ctype,N>::secondDerivativeOfDistanceSquaredWRTFirstAndSecondArgument(p.q,q.q);
+ for (int i=0; i<Rotation<T,N>::embeddedDim; i++)
+ for (int j=0; j<Rotation<T,N>::embeddedDim; j++)
+ result[N+i][N+j] = rotationPart[i][j];
+
+ return result;
+ }
- Unlike the distance itself the squared distance is differentiable at zero
- */
- static Tensor3<T,embeddedDim,embeddedDim,embeddedDim> thirdDerivativeOfDistanceSquaredWRTSecondArgument(const RigidBodyMotion<ctype,N> & p, const RigidBodyMotion<ctype,N> & q)
- {
- Tensor3<T,embeddedDim,embeddedDim,embeddedDim> result(0);
+ /** \brief Compute the third derivative \partial d^3 / \partial dq^3
+
+ Unlike the distance itself the squared distance is differentiable at zero
+ */
+ static Tensor3<T,embeddedDim,embeddedDim,embeddedDim> thirdDerivativeOfDistanceSquaredWRTSecondArgument(const RigidBodyMotion<ctype,N> & p, const RigidBodyMotion<ctype,N> & q)
+ {
+ Tensor3<T,embeddedDim,embeddedDim,embeddedDim> result(0);
- // The linear part
- Tensor3<T,N,N,N> linearPart = RealTuple<T,N>::thirdDerivativeOfDistanceSquaredWRTSecondArgument(p.r,q.r);
- for (int i=0; i<N; i++)
- for (int j=0; j<N; j++)
- for (int k=0; k<N; k++)
- result[i][j][k] = linearPart[i][j][k];
+ // The linear part
+ Tensor3<T,N,N,N> linearPart = RealTuple<T,N>::thirdDerivativeOfDistanceSquaredWRTSecondArgument(p.r,q.r);
+ for (int i=0; i<N; i++)
+ for (int j=0; j<N; j++)
+ for (int k=0; k<N; k++)
+ result[i][j][k] = linearPart[i][j][k];
- // The rotation part
- Tensor3<T,Rotation<T,N>::embeddedDim,Rotation<T,N>::embeddedDim,Rotation<T,N>::embeddedDim> rotationPart
- = Rotation<ctype,N>::thirdDerivativeOfDistanceSquaredWRTSecondArgument(p.q,q.q);
+ // The rotation part
+ Tensor3<T,Rotation<T,N>::embeddedDim,Rotation<T,N>::embeddedDim,Rotation<T,N>::embeddedDim> rotationPart
+ = Rotation<ctype,N>::thirdDerivativeOfDistanceSquaredWRTSecondArgument(p.q,q.q);
- for (int i=0; i<Rotation<T,N>::embeddedDim; i++)
- for (int j=0; j<Rotation<T,N>::embeddedDim; j++)
- for (int k=0; k<Rotation<T,N>::embeddedDim; k++)
- result[N+i][N+j][N+k] = rotationPart[i][j][k];
+ for (int i=0; i<Rotation<T,N>::embeddedDim; i++)
+ for (int j=0; j<Rotation<T,N>::embeddedDim; j++)
+ for (int k=0; k<Rotation<T,N>::embeddedDim; k++)
+ result[N+i][N+j][N+k] = rotationPart[i][j][k];
- return result;
- }
+ return result;
+ }
- /** \brief Compute the mixed third derivative \partial d^3 / \partial da db^2
+ /** \brief Compute the mixed third derivative \partial d^3 / \partial da db^2
- Unlike the distance itself the squared distance is differentiable at zero
- */
- static Tensor3<T,embeddedDim,embeddedDim,embeddedDim> thirdDerivativeOfDistanceSquaredWRTFirst1AndSecond2Argument(const RigidBodyMotion<ctype,N> & p, const RigidBodyMotion<ctype,N> & q)
- {
- Tensor3<T,embeddedDim,embeddedDim,embeddedDim> result(0);
-
- // The linear part
- Tensor3<T,N,N,N> linearPart = RealTuple<T,N>::thirdDerivativeOfDistanceSquaredWRTFirst1AndSecond2Argument(p.r,q.r);
- for (int i=0; i<N; i++)
- for (int j=0; j<N; j++)
- for (int k=0; k<N; k++)
- result[i][j][k] = linearPart[i][j][k];
-
- // The rotation part
- Tensor3<T,Rotation<T,N>::embeddedDim,Rotation<T,N>::embeddedDim,Rotation<T,N>::embeddedDim> rotationPart = Rotation<ctype,N>::thirdDerivativeOfDistanceSquaredWRTFirst1AndSecond2Argument(p.q,q.q);
- for (int i=0; i<Rotation<T,N>::embeddedDim; i++)
- for (int j=0; j<Rotation<T,N>::embeddedDim; j++)
- for (int k=0; k<Rotation<T,N>::embeddedDim; k++)
- result[N+i][N+j][N+k] = rotationPart[i][j][k];
-
- return result;
- }
+ Unlike the distance itself the squared distance is differentiable at zero
+ */
+ static Tensor3<T,embeddedDim,embeddedDim,embeddedDim> thirdDerivativeOfDistanceSquaredWRTFirst1AndSecond2Argument(const RigidBodyMotion<ctype,N> & p, const RigidBodyMotion<ctype,N> & q)
+ {
+ Tensor3<T,embeddedDim,embeddedDim,embeddedDim> result(0);
+
+ // The linear part
+ Tensor3<T,N,N,N> linearPart = RealTuple<T,N>::thirdDerivativeOfDistanceSquaredWRTFirst1AndSecond2Argument(p.r,q.r);
+ for (int i=0; i<N; i++)
+ for (int j=0; j<N; j++)
+ for (int k=0; k<N; k++)
+ result[i][j][k] = linearPart[i][j][k];
+
+ // The rotation part
+ Tensor3<T,Rotation<T,N>::embeddedDim,Rotation<T,N>::embeddedDim,Rotation<T,N>::embeddedDim> rotationPart = Rotation<ctype,N>::thirdDerivativeOfDistanceSquaredWRTFirst1AndSecond2Argument(p.q,q.q);
+ for (int i=0; i<Rotation<T,N>::embeddedDim; i++)
+ for (int j=0; j<Rotation<T,N>::embeddedDim; j++)
+ for (int k=0; k<Rotation<T,N>::embeddedDim; k++)
+ result[N+i][N+j][N+k] = rotationPart[i][j][k];
+
+ return result;
+ }
- /** \brief Project tangent vector of R^n onto the tangent space */
- EmbeddedTangentVector projectOntoTangentSpace(const EmbeddedTangentVector& v) const {
- EmbeddedTangentVector result;
+ /** \brief Project tangent vector of R^n onto the tangent space */
+ EmbeddedTangentVector projectOntoTangentSpace(const EmbeddedTangentVector& v) const {
+ EmbeddedTangentVector result;
- // translation part
- for (int i=0; i<N; i++)
- result[i] = v[i];
+ // translation part
+ for (int i=0; i<N; i++)
+ result[i] = v[i];
- // rotation part
- typename Rotation<T,N>::EmbeddedTangentVector rotV;
- for (int i=0; i<Rotation<T,N>::embeddedDim; i++)
- rotV[i] = v[i+N];
+ // rotation part
+ typename Rotation<T,N>::EmbeddedTangentVector rotV;
+ for (int i=0; i<Rotation<T,N>::embeddedDim; i++)
+ rotV[i] = v[i+N];
- rotV = q.projectOntoTangentSpace(rotV);
+ rotV = q.projectOntoTangentSpace(rotV);
- for (int i=0; i<Rotation<T,N>::embeddedDim; i++)
- result[i+N] = rotV[i];
+ for (int i=0; i<Rotation<T,N>::embeddedDim; i++)
+ result[i+N] = rotV[i];
- return result;
- }
+ return result;
+ }
- /** \brief Project tangent vector of R^n onto the normal space space */
- EmbeddedTangentVector projectOntoNormalSpace(const EmbeddedTangentVector& v) const {
+ /** \brief Project tangent vector of R^n onto the normal space space */
+ EmbeddedTangentVector projectOntoNormalSpace(const EmbeddedTangentVector& v) const {
- EmbeddedTangentVector result;
+ EmbeddedTangentVector result;
- // translation part
- for (int i=0; i<N; i++)
- result[i] = 0;
+ // translation part
+ for (int i=0; i<N; i++)
+ result[i] = 0;
- // rotation part
- T sp = 0;
- for (int i=0; i<Rotation<T,N>::embeddedDim; i++)
- sp += v[i+N] * q[i];
+ // rotation part
+ T sp = 0;
+ for (int i=0; i<Rotation<T,N>::embeddedDim; i++)
+ sp += v[i+N] * q[i];
- for (int i=0; i<Rotation<T,N>::embeddedDim; i++)
- result[i+N] = sp * q[i];
+ for (int i=0; i<Rotation<T,N>::embeddedDim; i++)
+ result[i+N] = sp * q[i];
- return result;
- }
+ return result;
+ }
- /** \brief Transform tangent vectors from quaternion representation to matrix representation
- *
- * This class represents rotations as unit quaternions, and therefore variations of rotations
- * (i.e., tangent vector) are represented in quaternion space, too. However, some applications
- * require the tangent vectors as matrices. To obtain matrix coordinates we use the
- * chain rule, which means that we have to multiply the given derivative with
- * the derivative of the embedding of the unit quaternion into the space of 3x3 matrices.
- * This second derivative is almost given by the method getFirstDerivativesOfDirectors.
- * However, since the directors of a given unit quaternion are the _columns_ of the
- * corresponding orthogonal matrix, we need to invert the i and j indices
- *
- * As a typical GFE assembler will require this for several tangent vectors at once,
- * the implementation here is a vector one: It allows to treat several tangent vectors
- * together, which have to come as the columns of the `derivative` parameter.
- *
- * So, if I am not mistaken, result[i][j][k] contains \partial R_ij / \partial k
- *
- * \param derivative Tangent vector in quaternion coordinates
- * \returns DR Tangent vector in matrix coordinates
- */
- template <int blocksize>
- Tensor3<T,3,3,blocksize> quaternionTangentToMatrixTangent(const Dune::FieldMatrix<T,7,blocksize>& derivative) const
- {
- Tensor3<T,3,3,blocksize> result = T(0);
+ /** \brief Transform tangent vectors from quaternion representation to matrix representation
+ *
+ * This class represents rotations as unit quaternions, and therefore variations of rotations
+ * (i.e., tangent vector) are represented in quaternion space, too. However, some applications
+ * require the tangent vectors as matrices. To obtain matrix coordinates we use the
+ * chain rule, which means that we have to multiply the given derivative with
+ * the derivative of the embedding of the unit quaternion into the space of 3x3 matrices.
+ * This second derivative is almost given by the method getFirstDerivativesOfDirectors.
+ * However, since the directors of a given unit quaternion are the _columns_ of the
+ * corresponding orthogonal matrix, we need to invert the i and j indices
+ *
+ * As a typical GFE assembler will require this for several tangent vectors at once,
+ * the implementation here is a vector one: It allows to treat several tangent vectors
+ * together, which have to come as the columns of the `derivative` parameter.
+ *
+ * So, if I am not mistaken, result[i][j][k] contains \partial R_ij / \partial k
+ *
+ * \param derivative Tangent vector in quaternion coordinates
+ * \returns DR Tangent vector in matrix coordinates
+ */
+ template <int blocksize>
+ Tensor3<T,3,3,blocksize> quaternionTangentToMatrixTangent(const Dune::FieldMatrix<T,7,blocksize>& derivative) const
+ {
+ Tensor3<T,3,3,blocksize> result = T(0);
- Tensor3<T,3 , 3, 4> dd_dq;
- q.getFirstDerivativesOfDirectors(dd_dq);
+ Tensor3<T,3 , 3, 4> dd_dq;
+ q.getFirstDerivativesOfDirectors(dd_dq);
- for (int i=0; i<3; i++)
- for (int j=0; j<3; j++)
- for (int k=0; k<blocksize; k++)
- for (int l=0; l<4; l++)
- result[i][j][k] += dd_dq[j][i][l] * derivative[l+3][k];
+ for (int i=0; i<3; i++)
+ for (int j=0; j<3; j++)
+ for (int k=0; k<blocksize; k++)
+ for (int l=0; l<4; l++)
+ result[i][j][k] += dd_dq[j][i][l] * derivative[l+3][k];
- return result;
- }
+ return result;
+ }
- /** \brief The Weingarten map */
- EmbeddedTangentVector weingarten(const EmbeddedTangentVector& z, const EmbeddedTangentVector& v) const {
+ /** \brief The Weingarten map */
+ EmbeddedTangentVector weingarten(const EmbeddedTangentVector& z, const EmbeddedTangentVector& v) const {
- EmbeddedTangentVector result;
+ EmbeddedTangentVector result;
- // translation part: nothing, the space is flat
- for (int i=0; i<N; i++)
- result[i] = 0;
+ // translation part: nothing, the space is flat
+ for (int i=0; i<N; i++)
+ result[i] = 0;
- // rotation part
- T sp = 0;
- for (int i=0; i<Rotation<T,N>::embeddedDim; i++)
- sp += v[i+N] * q[i];
+ // rotation part
+ T sp = 0;
+ for (int i=0; i<Rotation<T,N>::embeddedDim; i++)
+ sp += v[i+N] * q[i];
- for (int i=0; i<Rotation<T,N>::embeddedDim; i++)
- result[i+N] = -sp * z[i+N];
+ for (int i=0; i<Rotation<T,N>::embeddedDim; i++)
+ result[i+N] = -sp * z[i+N];
- return result;
- }
+ return result;
+ }
- /** \brief Compute an orthonormal basis of the tangent space of SE(3).
+ /** \brief Compute an orthonormal basis of the tangent space of SE(3).
- This basis may not be globally continuous.
- */
- Dune::FieldMatrix<T,dim,embeddedDim> orthonormalFrame() const {
- Dune::FieldMatrix<T,dim,embeddedDim> result(0);
+ This basis may not be globally continuous.
+ */
+ Dune::FieldMatrix<T,dim,embeddedDim> orthonormalFrame() const {
+ Dune::FieldMatrix<T,dim,embeddedDim> result(0);
- // Get the R^d part
- for (int i=0; i<N; i++)
- result[i][i] = 1;
+ // Get the R^d part
+ for (int i=0; i<N; i++)
+ result[i][i] = 1;
- Dune::FieldMatrix<T,Rotation<T,N>::dim,Rotation<T,N>::embeddedDim> SO3Part = q.orthonormalFrame();
+ Dune::FieldMatrix<T,Rotation<T,N>::dim,Rotation<T,N>::embeddedDim> SO3Part = q.orthonormalFrame();
- for (int i=0; i<Rotation<T,N>::dim; i++)
- for (int j=0; j<Rotation<T,N>::embeddedDim; j++)
- result[N+i][N+j] = SO3Part[i][j];
+ for (int i=0; i<Rotation<T,N>::dim; i++)
+ for (int j=0; j<Rotation<T,N>::embeddedDim; j++)
+ result[N+i][N+j] = SO3Part[i][j];
- return result;
- }
+ return result;
+ }
- /** \brief The global coordinates, if you really want them */
- CoordinateType globalCoordinates() const {
- return concat(r, q.globalCoordinates());
- }
+ /** \brief The global coordinates, if you really want them */
+ CoordinateType globalCoordinates() const {
+ return concat(r, q.globalCoordinates());
+ }
- // Translational part
- Dune::FieldVector<ctype, N> r;
+ // Translational part
+ Dune::FieldVector<ctype, N> r;
- // Rotational part
- Rotation<ctype,N> q;
+ // Rotational part
+ Rotation<ctype,N> q;
private:
- /** \brief Concatenate two FieldVectors */
- template <int NN, int M>
- static Dune::FieldVector<ctype,NN+M> concat(const Dune::FieldVector<ctype,NN>& a,
- const Dune::FieldVector<ctype,M>& b)
- {
- Dune::FieldVector<ctype,NN+M> result;
- for (int i=0; i<NN; i++)
- result[i] = a[i];
- for (int i=0; i<M; i++)
- result[i+NN] = b[i];
- return result;
- }
+ /** \brief Concatenate two FieldVectors */
+ template <int NN, int M>
+ static Dune::FieldVector<ctype,NN+M> concat(const Dune::FieldVector<ctype,NN>& a,
+ const Dune::FieldVector<ctype,M>& b)
+ {
+ Dune::FieldVector<ctype,NN+M> result;
+ for (int i=0; i<NN; i++)
+ result[i] = a[i];
+ for (int i=0; i<M; i++)
+ result[i+NN] = b[i];
+ return result;
+ }
};
//! Send configuration to output stream
template <int N, class ctype>
std::ostream& operator<< (std::ostream& s, const RigidBodyMotion<ctype,N>& c)
- {
- s << "(" << c.r << ") (" << c.q << ")";
- return s;
- }
+{
+ s << "(" << c.r << ") (" << c.q << ")";
+ return s;
+}
#endif
diff --git a/dune/gfe/spaces/rotation.hh b/dune/gfe/spaces/rotation.hh
index fce1ce78..271fc228 100644
--- a/dune/gfe/spaces/rotation.hh
+++ b/dune/gfe/spaces/rotation.hh
@@ -3,7 +3,7 @@
/** \file
\brief Define rotations in Euclidean spaces
-*/
+ */
#include <array>
@@ -20,1233 +20,1231 @@
template <class T, int dim>
class Rotation
-{
-
-};
+{};
/** \brief Specialization for dim==2
\tparam T The type used for coordinates
-*/
+ */
template <class T>
class Rotation<T,2>
{
public:
- /** \brief The type used for coordinates */
- typedef T ctype;
+ /** \brief The type used for coordinates */
+ typedef T ctype;
- /** \brief Dimension of the manifold formed by the 2d rotations */
- static const int dim = 1;
+ /** \brief Dimension of the manifold formed by the 2d rotations */
+ static const int dim = 1;
- /** \brief Coordinates are embedded in the euclidean space */
- static const int embeddedDim = 1;
+ /** \brief Coordinates are embedded in the euclidean space */
+ static const int embeddedDim = 1;
- /** \brief Member of the corresponding Lie algebra. This really is a skew-symmetric matrix */
- typedef Dune::FieldVector<T,1> TangentVector;
+ /** \brief Member of the corresponding Lie algebra. This really is a skew-symmetric matrix */
+ typedef Dune::FieldVector<T,1> TangentVector;
- /** \brief Member of the corresponding Lie algebra. This really is a skew-symmetric matrix
+ /** \brief Member of the corresponding Lie algebra. This really is a skew-symmetric matrix
- This vector is not really embedded in anything. I have to make my notation more consistent! */
- typedef Dune::FieldVector<T,1> EmbeddedTangentVector;
+ This vector is not really embedded in anything. I have to make my notation more consistent! */
+ typedef Dune::FieldVector<T,1> EmbeddedTangentVector;
- /** \brief The global convexity radius of the rotation group */
- static constexpr double convexityRadius = 0.5 * M_PI;
+ /** \brief The global convexity radius of the rotation group */
+ static constexpr double convexityRadius = 0.5 * M_PI;
- /** \brief Default constructor, create the identity rotation */
- Rotation()
- : angle_(0)
- {}
+ /** \brief Default constructor, create the identity rotation */
+ Rotation()
+ : angle_(0)
+ {}
- Rotation(const T& angle)
- : angle_(angle)
- {}
+ Rotation(const T& angle)
+ : angle_(angle)
+ {}
- /** \brief Return the identity element */
- static Rotation<T,2> identity() {
- // Default constructor creates an identity
- Rotation<T,2> id;
- return id;
- }
+ /** \brief Return the identity element */
+ static Rotation<T,2> identity() {
+ // Default constructor creates an identity
+ Rotation<T,2> id;
+ return id;
+ }
- static T distance(const Rotation<T,2>& a, const Rotation<T,2>& b) {
- T dist = a.angle_ - b.angle_;
- while (dist < 0)
- dist += 2*M_PI;
- while (dist > 2*M_PI)
- dist -= 2*M_PI;
+ static T distance(const Rotation<T,2>& a, const Rotation<T,2>& b) {
+ T dist = a.angle_ - b.angle_;
+ while (dist < 0)
+ dist += 2*M_PI;
+ while (dist > 2*M_PI)
+ dist -= 2*M_PI;
- return (dist <= M_PI) ? dist : 2*M_PI - dist;
- }
+ return (dist <= M_PI) ? dist : 2*M_PI - dist;
+ }
- /** \brief The exponential map from a given point $p \in SO(3)$. */
- static Rotation<T,2> exp(const Rotation<T,2>& p, const TangentVector& v) {
- Rotation<T,2> result = p;
- result.angle_ += v;
- return result;
- }
+ /** \brief The exponential map from a given point $p \in SO(3)$. */
+ static Rotation<T,2> exp(const Rotation<T,2>& p, const TangentVector& v) {
+ Rotation<T,2> result = p;
+ result.angle_ += v;
+ return result;
+ }
- /** \brief The exponential map from \f$ \mathfrak{so}(2) \f$ to \f$ SO(2) \f$
- */
- static Rotation<T,2> exp(const Dune::FieldVector<T,1>& v) {
- Rotation<T,2> result;
- result.angle_ = v[0];
- return result;
- }
+ /** \brief The exponential map from \f$ \mathfrak{so}(2) \f$ to \f$ SO(2) \f$
+ */
+ static Rotation<T,2> exp(const Dune::FieldVector<T,1>& v) {
+ Rotation<T,2> result;
+ result.angle_ = v[0];
+ return result;
+ }
- static TangentVector derivativeOfDistanceSquaredWRTSecondArgument(const Rotation<T,2>& a,
- const Rotation<T,2>& b) {
- // This assertion is here to remind me of the following laziness:
- // The difference has to be computed modulo 2\pi
- assert( std::abs(a.angle_ - b.angle_) <= M_PI );
- return -2 * (a.angle_ - b.angle_);
- }
+ static TangentVector derivativeOfDistanceSquaredWRTSecondArgument(const Rotation<T,2>& a,
+ const Rotation<T,2>& b) {
+ // This assertion is here to remind me of the following laziness:
+ // The difference has to be computed modulo 2\pi
+ assert( std::abs(a.angle_ - b.angle_) <= M_PI );
+ return -2 * (a.angle_ - b.angle_);
+ }
- static Dune::FieldMatrix<T,1,1> secondDerivativeOfDistanceSquaredWRTSecondArgument(const Rotation<T,2>& a,
- const Rotation<T,2>& b) {
- return 2;
- }
+ static Dune::FieldMatrix<T,1,1> secondDerivativeOfDistanceSquaredWRTSecondArgument(const Rotation<T,2>& a,
+ const Rotation<T,2>& b) {
+ return 2;
+ }
- /** \brief Right multiplication */
- Rotation<T,2> mult(const Rotation<T,2>& other) const {
- Rotation<T,2> q = *this;
- q.angle_ += other.angle_;
- return q;
- }
+ /** \brief Right multiplication */
+ Rotation<T,2> mult(const Rotation<T,2>& other) const {
+ Rotation<T,2> q = *this;
+ q.angle_ += other.angle_;
+ return q;
+ }
- /** \brief Compute an orthonormal basis of the tangent space of SO(3).
+ /** \brief Compute an orthonormal basis of the tangent space of SO(3).
- This basis is of course not globally continuous.
- */
- Dune::FieldMatrix<T,1,1> orthonormalFrame() const {
- return Dune::FieldMatrix<T,1,1>(1);
- }
+ This basis is of course not globally continuous.
+ */
+ Dune::FieldMatrix<T,1,1> orthonormalFrame() const {
+ return Dune::FieldMatrix<T,1,1>(1);
+ }
- //private:
+ //private:
- // We store the rotation as an angle
- T angle_;
+ // We store the rotation as an angle
+ T angle_;
};
//! Send configuration to output stream
template <class T>
std::ostream& operator<< (std::ostream& s, const Rotation<T,2>& c)
- {
- return s << "[" << c.angle_ << " (" << std::sin(c.angle_) << " " << std::cos(c.angle_) << ") ]";
- }
+{
+ return s << "[" << c.angle_ << " (" << std::sin(c.angle_) << " " << std::cos(c.angle_) << ") ]";
+}
/** \brief Specialization for dim==3
-Uses unit quaternion coordinates.
-\todo Reimplement the method inverse() such that it returns a Rotation instead of a Quaternion.
-Then remove the cast in the method setRotation, file averageinterface.hh
-*/
+ Uses unit quaternion coordinates.
+ \todo Reimplement the method inverse() such that it returns a Rotation instead of a Quaternion.
+ Then remove the cast in the method setRotation, file averageinterface.hh
+ */
template <class T>
class Rotation<T,3> : public Quaternion<T>
{
- /** \brief Computes sin(x/2) / x without getting unstable for small x */
- static T sincHalf(const T& x) {
- using std::sin;
- return (x < 1e-1) ? 0.5 - (x*x/48) + Dune::power(x,4)/3840 - Dune::power(x,6)/645120 : sin(x/2)/x;
- }
+ /** \brief Computes sin(x/2) / x without getting unstable for small x */
+ static T sincHalf(const T& x) {
+ using std::sin;
+ return (x < 1e-1) ? 0.5 - (x*x/48) + Dune::power(x,4)/3840 - Dune::power(x,6)/645120 : sin(x/2)/x;
+ }
- /** \brief Computes sin(sqrt(x)/2) / sqrt(x) without getting unstable for small x
- *
- * Using this somewhat exotic series allows to avoid a few calls to std::sqrt near 0,
- * which ADOL-C doesn't like.
- */
- static T sincHalfOfSquare(const T& x) {
- using std::sin;
- using std::sqrt;
- return (x < 1e-15) ? 0.5 - (x/48) + (x*x)/(120*32) : sin(sqrt(x)/2)/sqrt(x);
- }
+ /** \brief Computes sin(sqrt(x)/2) / sqrt(x) without getting unstable for small x
+ *
+ * Using this somewhat exotic series allows to avoid a few calls to std::sqrt near 0,
+ * which ADOL-C doesn't like.
+ */
+ static T sincHalfOfSquare(const T& x) {
+ using std::sin;
+ using std::sqrt;
+ return (x < 1e-15) ? 0.5 - (x/48) + (x*x)/(120*32) : sin(sqrt(x)/2)/sqrt(x);
+ }
- /** \brief Computes sin(sqrt(x)) / sqrt(x) without getting unstable for small x
- *
- * Using this somewhat exotic series allows to avoid a few calls to std::sqrt near 0,
- * which ADOL-C doesn't like.
- */
- static T sincOfSquare(const T& x) {
- using std::sin;
- using std::sqrt;
- // we need here lots of terms to be sure that the numerical derivatives are also within maschine precision
- return (x < 1e-2) ?
- 1-x/6
- +x*x/120
- -Dune::power(x,3)/5040
- +Dune::power(x,4)/362880
- -Dune::power(x,5)/39916800
- +Dune::power(x,6)/6227020800
- -Dune::power(x,7)/1307674368000: sin(sqrt(x))/sqrt(x);
- }
+ /** \brief Computes sin(sqrt(x)) / sqrt(x) without getting unstable for small x
+ *
+ * Using this somewhat exotic series allows to avoid a few calls to std::sqrt near 0,
+ * which ADOL-C doesn't like.
+ */
+ static T sincOfSquare(const T& x) {
+ using std::sin;
+ using std::sqrt;
+ // we need here lots of terms to be sure that the numerical derivatives are also within maschine precision
+ return (x < 1e-2) ?
+ 1-x/6
+ +x*x/120
+ -Dune::power(x,3)/5040
+ +Dune::power(x,4)/362880
+ -Dune::power(x,5)/39916800
+ +Dune::power(x,6)/6227020800
+ -Dune::power(x,7)/1307674368000: sin(sqrt(x))/sqrt(x);
+ }
public:
- /** \brief The type used for coordinates */
- typedef T ctype;
+ /** \brief The type used for coordinates */
+ typedef T ctype;
- /** \brief The type used for global coordinates */
- typedef Dune::FieldVector<T,4> CoordinateType;
+ /** \brief The type used for global coordinates */
+ typedef Dune::FieldVector<T,4> CoordinateType;
- /** \brief Dimension of the manifold formed by the 3d rotations */
- static const int dim = 3;
+ /** \brief Dimension of the manifold formed by the 3d rotations */
+ static const int dim = 3;
- /** \brief Coordinates are embedded into a four-dimension Euclidean space */
- static const int embeddedDim = 4;
+ /** \brief Coordinates are embedded into a four-dimension Euclidean space */
+ static const int embeddedDim = 4;
- /** \brief Member of the corresponding Lie algebra. This really is a skew-symmetric matrix */
- typedef Dune::FieldVector<T,3> TangentVector;
+ /** \brief Member of the corresponding Lie algebra. This really is a skew-symmetric matrix */
+ typedef Dune::FieldVector<T,3> TangentVector;
- /** \brief A tangent vector as a vector in the surrounding coordinate space */
- typedef Quaternion<T> EmbeddedTangentVector;
+ /** \brief A tangent vector as a vector in the surrounding coordinate space */
+ typedef Quaternion<T> EmbeddedTangentVector;
- /** \brief The global convexity radius of the rotation group */
- static constexpr double convexityRadius = 0.5 * M_PI;
+ /** \brief The global convexity radius of the rotation group */
+ static constexpr double convexityRadius = 0.5 * M_PI;
- /** \brief Default constructor creates the identity element */
- Rotation()
- : Quaternion<T>(0,0,0,1)
- {}
+ /** \brief Default constructor creates the identity element */
+ Rotation()
+ : Quaternion<T>(0,0,0,1)
+ {}
- explicit Rotation(const std::array<T,4>& c)
- {
- for (int i=0; i<4; i++)
- (*this)[i] = c[i];
+ explicit Rotation(const std::array<T,4>& c)
+ {
+ for (int i=0; i<4; i++)
+ (*this)[i] = c[i];
- *this /= this->two_norm();
- }
+ *this /= this->two_norm();
+ }
- explicit Rotation(const Dune::FieldVector<T,4>& c)
- : Quaternion<T>(c)
- {
- *this /= this->two_norm();
- }
+ explicit Rotation(const Dune::FieldVector<T,4>& c)
+ : Quaternion<T>(c)
+ {
+ *this /= this->two_norm();
+ }
- Rotation(Dune::FieldVector<T,3> axis, T angle)
- {
- axis /= axis.two_norm();
- axis *= std::sin(angle/2);
- (*this)[0] = axis[0];
- (*this)[1] = axis[1];
- (*this)[2] = axis[2];
- (*this)[3] = std::cos(angle/2);
- }
+ Rotation(Dune::FieldVector<T,3> axis, T angle)
+ {
+ axis /= axis.two_norm();
+ axis *= std::sin(angle/2);
+ (*this)[0] = axis[0];
+ (*this)[1] = axis[1];
+ (*this)[2] = axis[2];
+ (*this)[3] = std::cos(angle/2);
+ }
- /** \brief Rebind the Rotation to another coordinate type */
- template<class U>
- struct rebind
- {
- typedef Rotation<U,3> other;
- };
+ /** \brief Rebind the Rotation to another coordinate type */
+ template<class U>
+ struct rebind
+ {
+ typedef Rotation<U,3> other;
+ };
- Rotation& operator= (const Dune::FieldVector<T,4>& other)
- {
- for (int i=0; i<4; i++)
- (*this)[i] = other[i];
- *this /= this->two_norm();
- return *this;
- }
+ Rotation& operator= (const Dune::FieldVector<T,4>& other)
+ {
+ for (int i=0; i<4; i++)
+ (*this)[i] = other[i];
+ *this /= this->two_norm();
+ return *this;
+ }
- /** \brief Assignment from Rotation with different type -- used for automatic differentiation with ADOL-C */
- template <class T2>
- Rotation& operator <<= (const Rotation<T2,3>& other) {
- for (int i=0; i<4; i++)
- (*this)[i] <<= other[i];
- return *this;
- }
+ /** \brief Assignment from Rotation with different type -- used for automatic differentiation with ADOL-C */
+ template <class T2>
+ Rotation& operator <<= (const Rotation<T2,3>& other) {
+ for (int i=0; i<4; i++)
+ (*this)[i] <<= other[i];
+ return *this;
+ }
- /** \brief Return the identity element */
- static Rotation<T,3> identity() {
- // Default constructor creates an identity
- Rotation<T,3> id;
- return id;
- }
+ /** \brief Return the identity element */
+ static Rotation<T,3> identity() {
+ // Default constructor creates an identity
+ Rotation<T,3> id;
+ return id;
+ }
- /** \brief Right multiplication */
- Rotation<T,3> mult(const Rotation<T,3>& other) const {
- Rotation<T,3> q;
- q[0] = (*this)[3]*other[0] - (*this)[2]*other[1] + (*this)[1]*other[2] + (*this)[0]*other[3];
- q[1] = (*this)[2]*other[0] + (*this)[3]*other[1] - (*this)[0]*other[2] + (*this)[1]*other[3];
- q[2] = - (*this)[1]*other[0] + (*this)[0]*other[1] + (*this)[3]*other[2] + (*this)[2]*other[3];
- q[3] = - (*this)[0]*other[0] - (*this)[1]*other[1] - (*this)[2]*other[2] + (*this)[3]*other[3];
+ /** \brief Right multiplication */
+ Rotation<T,3> mult(const Rotation<T,3>& other) const {
+ Rotation<T,3> q;
+ q[0] = (*this)[3]*other[0] - (*this)[2]*other[1] + (*this)[1]*other[2] + (*this)[0]*other[3];
+ q[1] = (*this)[2]*other[0] + (*this)[3]*other[1] - (*this)[0]*other[2] + (*this)[1]*other[3];
+ q[2] = - (*this)[1]*other[0] + (*this)[0]*other[1] + (*this)[3]*other[2] + (*this)[2]*other[3];
+ q[3] = - (*this)[0]*other[0] - (*this)[1]*other[1] - (*this)[2]*other[2] + (*this)[3]*other[3];
- return q;
- }
+ return q;
+ }
- /** \brief The exponential map from \f$ \mathfrak{so}(3) \f$ to \f$ SO(3) \f$
- */
- static Rotation<T,3> exp(const SkewMatrix<T,3>& v) {
- using std::cos;
- using std::sqrt;
+ /** \brief The exponential map from \f$ \mathfrak{so}(3) \f$ to \f$ SO(3) \f$
+ */
+ static Rotation<T,3> exp(const SkewMatrix<T,3>& v) {
+ using std::cos;
+ using std::sqrt;
- Rotation<T,3> q;
+ Rotation<T,3> q;
- Dune::FieldVector<T,3> vAxial = v.axial();
- T normV2 = vAxial.two_norm2();
+ Dune::FieldVector<T,3> vAxial = v.axial();
+ T normV2 = vAxial.two_norm2();
- // Stabilization for small |v|
- T sin = sincHalfOfSquare(normV2);
+ // Stabilization for small |v|
+ T sin = sincHalfOfSquare(normV2);
- assert(!std::isnan(sin));
+ assert(!std::isnan(sin));
- q[0] = sin * vAxial[0];
- q[1] = sin * vAxial[1];
- q[2] = sin * vAxial[2];
+ q[0] = sin * vAxial[0];
+ q[1] = sin * vAxial[1];
+ q[2] = sin * vAxial[2];
- // The series expansion of cos(x) at x=0 is
- // 1 - x*x/2 + x*x*x*x/24 - ...
- // hence the series of cos(x/2) is
- // 1 - x*x/8 + x*x*x*x/384 - ...
- q[3] = (normV2 < 1e-4)
+ // The series expansion of cos(x) at x=0 is
+ // 1 - x*x/2 + x*x*x*x/24 - ...
+ // hence the series of cos(x/2) is
+ // 1 - x*x/8 + x*x*x*x/384 - ...
+ q[3] = (normV2 < 1e-4)
? 1 - normV2/8 + normV2*normV2 / 384-Dune::power(normV2,3)/46080 + Dune::power(normV2,4)/10321920
: cos(sqrt(normV2)/2);
- return q;
- }
+ return q;
+ }
- /** \brief The exponential map from a given point $p \in SO(3)$.
+ /** \brief The exponential map from a given point $p \in SO(3)$.
- * \param v A tangent vector *at the identity*!
- */
- static Rotation<T,3> exp(const Rotation<T,3>& p, const SkewMatrix<T,3>& v) {
- Rotation<T,3> corr = exp(v);
- return p.mult(corr);
- }
+ * \param v A tangent vector *at the identity*!
+ */
+ static Rotation<T,3> exp(const Rotation<T,3>& p, const SkewMatrix<T,3>& v) {
+ Rotation<T,3> corr = exp(v);
+ return p.mult(corr);
+ }
- /** \brief The exponential map from a given point $p \in SO(3)$.
+ /** \brief The exponential map from a given point $p \in SO(3)$.
- There may be a more direct way to implement this
+ There may be a more direct way to implement this
- \param v A tangent vector in quaternion coordinates
- */
- static Rotation<T,3> exp(const Rotation<T,3>& p, const Dune::FieldVector<T,4>& v) {
+ \param v A tangent vector in quaternion coordinates
+ */
+ static Rotation<T,3> exp(const Rotation<T,3>& p, const Dune::FieldVector<T,4>& v) {
- using std::abs;
- using std::cos;
- using std::sqrt;
- assert( abs(p*v) < 1e-8 );
+ using std::abs;
+ using std::cos;
+ using std::sqrt;
+ assert( abs(p*v) < 1e-8 );
- const T norm2 = v.two_norm2();
+ const T norm2 = v.two_norm2();
- Rotation<T,3> result = p;
+ Rotation<T,3> result = p;
- // The series expansion of cos(x) at x=0 is
- // 1 - x*x/2 + x*x*x*x/24 - ...
- T cosValue = (norm2 < 1e-5)
+ // The series expansion of cos(x) at x=0 is
+ // 1 - x*x/2 + x*x*x*x/24 - ...
+ T cosValue = (norm2 < 1e-5)
? 1 - norm2/2 + norm2*norm2 / 24 - Dune::power(norm2,3)/720+Dune::power(norm2,4)/40320
: cos(sqrt(norm2));
- result *= cosValue;
+ result *= cosValue;
- result.axpy(sincOfSquare(norm2), v);
- return result;
- }
+ result.axpy(sincOfSquare(norm2), v);
+ return result;
+ }
- /** \brief The exponential map from a given point $p \in SO(3)$.
+ /** \brief The exponential map from a given point $p \in SO(3)$.
- \param v A tangent vector.
- */
- static Rotation<T,3> exp(const Rotation<T,3>& p, const TangentVector& v) {
+ \param v A tangent vector.
+ */
+ static Rotation<T,3> exp(const Rotation<T,3>& p, const TangentVector& v) {
- // embedded tangent vector
- Dune::FieldMatrix<T,3,4> basis = p.orthonormalFrame();
- Quaternion<T> embeddedTangent;
- basis.mtv(v, embeddedTangent);
+ // embedded tangent vector
+ Dune::FieldMatrix<T,3,4> basis = p.orthonormalFrame();
+ Quaternion<T> embeddedTangent;
+ basis.mtv(v, embeddedTangent);
- return exp(p,embeddedTangent);
+ return exp(p,embeddedTangent);
- }
+ }
- /** \brief Compute tangent vector from given basepoint and skew symmetric matrix. */
- static TangentVector skewToTangentVector(const Rotation<T,3>& p, const SkewMatrix<T,3>& v ) {
+ /** \brief Compute tangent vector from given basepoint and skew symmetric matrix. */
+ static TangentVector skewToTangentVector(const Rotation<T,3>& p, const SkewMatrix<T,3>& v ) {
- // embedded tangent vector at identity
- Quaternion<T> vAtIdentity(0);
- vAtIdentity[0] = 0.5*v.axial()[0];
- vAtIdentity[1] = 0.5*v.axial()[1];
- vAtIdentity[2] = 0.5*v.axial()[2];
+ // embedded tangent vector at identity
+ Quaternion<T> vAtIdentity(0);
+ vAtIdentity[0] = 0.5*v.axial()[0];
+ vAtIdentity[1] = 0.5*v.axial()[1];
+ vAtIdentity[2] = 0.5*v.axial()[2];
- // multiply with base point to get real embedded tangent vector
- Quaternion<T> vQuat = ((Quaternion<T>) p).mult(vAtIdentity);
+ // multiply with base point to get real embedded tangent vector
+ Quaternion<T> vQuat = ((Quaternion<T>)p).mult(vAtIdentity);
- //get basis of the tangent space
- Dune::FieldMatrix<T,3,4> basis = p.orthonormalFrame();
+ //get basis of the tangent space
+ Dune::FieldMatrix<T,3,4> basis = p.orthonormalFrame();
- // transform coordinates
- TangentVector tang;
- basis.mv(vQuat,tang);
+ // transform coordinates
+ TangentVector tang;
+ basis.mv(vQuat,tang);
- return tang;
- }
+ return tang;
+ }
- /** \brief Compute skew matrix from given basepoint and tangent vector. */
- static SkewMatrix<T,3> tangentToSkew(const Rotation<T,3>& p, const TangentVector& tangent) {
+ /** \brief Compute skew matrix from given basepoint and tangent vector. */
+ static SkewMatrix<T,3> tangentToSkew(const Rotation<T,3>& p, const TangentVector& tangent) {
- // embedded tangent vector
- Dune::FieldMatrix<T,3,4> basis = p.orthonormalFrame();
- Quaternion<T> embeddedTangent;
- basis.mtv(tangent, embeddedTangent);
+ // embedded tangent vector
+ Dune::FieldMatrix<T,3,4> basis = p.orthonormalFrame();
+ Quaternion<T> embeddedTangent;
+ basis.mtv(tangent, embeddedTangent);
- return tangentToSkew(p,embeddedTangent);
- }
+ return tangentToSkew(p,embeddedTangent);
+ }
- /** \brief Compute skew matrix from given basepoint and an embedded tangent vector. */
- static SkewMatrix<T,3> tangentToSkew(const Rotation<T,3>& p, const EmbeddedTangentVector& q) {
+ /** \brief Compute skew matrix from given basepoint and an embedded tangent vector. */
+ static SkewMatrix<T,3> tangentToSkew(const Rotation<T,3>& p, const EmbeddedTangentVector& q) {
- // left multiplication by the inverse base point yields a tangent vector at the identity
- Quaternion<T> vAtIdentity = p.inverse().mult(q);
- assert( std::abs(vAtIdentity[3]) < 1e-8 );
+ // left multiplication by the inverse base point yields a tangent vector at the identity
+ Quaternion<T> vAtIdentity = p.inverse().mult(q);
+ assert( std::abs(vAtIdentity[3]) < 1e-8 );
- SkewMatrix<T,3> skew;
- skew.axial()[0] = 2*vAtIdentity[0];
- skew.axial()[1] = 2*vAtIdentity[1];
- skew.axial()[2] = 2*vAtIdentity[2];
+ SkewMatrix<T,3> skew;
+ skew.axial()[0] = 2*vAtIdentity[0];
+ skew.axial()[1] = 2*vAtIdentity[1];
+ skew.axial()[2] = 2*vAtIdentity[2];
- return skew;
- }
+ return skew;
+ }
- /** \brief Derivative of the exponential map at the identity
- *
- * The exponential map at the identity is a map from a neighborhood of zero to the neighborhood of the identity rotation.
- *
- * \param v Where to evaluate the derivative of the (exponential map at the identity)
- */
- static Dune::FieldMatrix<T,4,3> Dexp(const SkewMatrix<T,3>& v) {
+ /** \brief Derivative of the exponential map at the identity
+ *
+ * The exponential map at the identity is a map from a neighborhood of zero to the neighborhood of the identity rotation.
+ *
+ * \param v Where to evaluate the derivative of the (exponential map at the identity)
+ */
+ static Dune::FieldMatrix<T,4,3> Dexp(const SkewMatrix<T,3>& v) {
- using std::cos;
+ using std::cos;
- Dune::FieldMatrix<T,4,3> result(0);
- Dune::FieldVector<T,3> vAxial = v.axial();
- T norm = vAxial.two_norm();
+ Dune::FieldMatrix<T,4,3> result(0);
+ Dune::FieldVector<T,3> vAxial = v.axial();
+ T norm = vAxial.two_norm();
- for (int i=0; i<3; i++) {
+ for (int i=0; i<3; i++) {
- for (int m=0; m<3; m++) {
+ for (int m=0; m<3; m++) {
- result[m][i] = (norm<1e-10)
- /** \todo Isn't there a better way to implement this stably? */
+ result[m][i] = (norm<1e-10)
+ /** \todo Isn't there a better way to implement this stably? */
? T(0.5) * (i==m)
: 0.5 * cos(norm/2) * vAxial[i] * vAxial[m] / (norm*norm) + sincHalf(norm) * ( (i==m) - vAxial[i]*vAxial[m]/(norm*norm));
- }
+ }
- result[3][i] = - 0.5 * sincHalf(norm) * vAxial[i];
+ result[3][i] = - 0.5 * sincHalf(norm) * vAxial[i];
- }
- return result;
}
+ return result;
+ }
- static void DDexp(const Dune::FieldVector<T,3>& v,
- std::array<Dune::FieldMatrix<T,3,3>, 4>& result) {
-
- using std::cos;
- using std::sin;
-
- T norm = v.two_norm();
- if (norm<=1e-10) {
+ static void DDexp(const Dune::FieldVector<T,3>& v,
+ std::array<Dune::FieldMatrix<T,3,3>, 4>& result) {
- for (int m=0; m<4; m++)
- result[m] = 0;
+ using std::cos;
+ using std::sin;
- for (int i=0; i<3; i++)
- result[3][i][i] = -0.25;
+ T norm = v.two_norm();
+ if (norm<=1e-10) {
+ for (int m=0; m<4; m++)
+ result[m] = 0;
- } else {
+ for (int i=0; i<3; i++)
+ result[3][i][i] = -0.25;
- for (int i=0; i<3; i++) {
- for (int j=0; j<3; j++) {
+ } else {
- for (int m=0; m<3; m++) {
+ for (int i=0; i<3; i++) {
- result[m][i][j] = -0.25*sin(norm/2)*v[i]*v[j]*v[m]/(norm*norm*norm)
- + ((i==j)*v[m] + (j==m)*v[i] + (i==m)*v[j] - 3*v[i]*v[j]*v[m]/(norm*norm))
- * (0.5*cos(norm/2) - sincHalf(norm)) / (norm*norm);
+ for (int j=0; j<3; j++) {
+ for (int m=0; m<3; m++) {
- }
+ result[m][i][j] = -0.25*sin(norm/2)*v[i]*v[j]*v[m]/(norm*norm*norm)
+ + ((i==j)*v[m] + (j==m)*v[i] + (i==m)*v[j] - 3*v[i]*v[j]*v[m]/(norm*norm))
+ * (0.5*cos(norm/2) - sincHalf(norm)) / (norm*norm);
- result[3][i][j] = -0.5/(norm*norm)
- * ( 0.5*cos(norm/2)*v[i]*v[j] + sin(norm/2) * ((i==j)*norm - v[i]*v[j]/norm));
- }
+ }
- }
+ result[3][i][j] = -0.5/(norm*norm)
+ * ( 0.5*cos(norm/2)*v[i]*v[j] + sin(norm/2) * ((i==j)*norm - v[i]*v[j]/norm));
}
+ }
+
}
- /** \brief The inverse of the exponential map */
- static Dune::FieldVector<T,3> expInv(const Rotation<T,3>& q) {
- // Compute v = exp^{-1} q
- // Due to numerical dirt, q[3] may be larger than 1.
- // In that case, use 1 instead of q[3].
- Dune::FieldVector<T,3> v;
- if (q[3] > 1.0) {
+ }
- v = 0;
+ /** \brief The inverse of the exponential map */
+ static Dune::FieldVector<T,3> expInv(const Rotation<T,3>& q) {
+ // Compute v = exp^{-1} q
+ // Due to numerical dirt, q[3] may be larger than 1.
+ // In that case, use 1 instead of q[3].
+ Dune::FieldVector<T,3> v;
+ if (q[3] > 1.0) {
- } else {
+ v = 0;
- using std::acos;
- T invSinc = 1/sincHalf(2*acos(q[3]));
+ } else {
- v[0] = q[0] * invSinc;
- v[1] = q[1] * invSinc;
- v[2] = q[2] * invSinc;
+ using std::acos;
+ T invSinc = 1/sincHalf(2*acos(q[3]));
+
+ v[0] = q[0] * invSinc;
+ v[1] = q[1] * invSinc;
+ v[2] = q[2] * invSinc;
- }
- return v;
}
+ return v;
+ }
- /** \brief The derivative of the inverse of the exponential map, evaluated at q */
- static Dune::FieldMatrix<T,3,4> DexpInv(const Rotation<T,3>& q) {
+ /** \brief The derivative of the inverse of the exponential map, evaluated at q */
+ static Dune::FieldMatrix<T,3,4> DexpInv(const Rotation<T,3>& q) {
- // Compute v = exp^{-1} q
- Dune::FieldVector<T,3> v = expInv(q);
+ // Compute v = exp^{-1} q
+ Dune::FieldVector<T,3> v = expInv(q);
- // The derivative of exp at v
- Dune::FieldMatrix<T,4,3> A = Dexp(SkewMatrix<T,3>(v));
+ // The derivative of exp at v
+ Dune::FieldMatrix<T,4,3> A = Dexp(SkewMatrix<T,3>(v));
- // Compute the Moore-Penrose pseudo inverse A^+ = (A^T A)^{-1} A^T
- Dune::FieldMatrix<T,3,3> ATA;
+ // Compute the Moore-Penrose pseudo inverse A^+ = (A^T A)^{-1} A^T
+ Dune::FieldMatrix<T,3,3> ATA;
- for (int i=0; i<3; i++)
- for (int j=0; j<3; j++) {
- ATA[i][j] = 0;
- for (int k=0; k<4; k++)
- ATA[i][j] += A[k][i] * A[k][j];
- }
+ for (int i=0; i<3; i++)
+ for (int j=0; j<3; j++) {
+ ATA[i][j] = 0;
+ for (int k=0; k<4; k++)
+ ATA[i][j] += A[k][i] * A[k][j];
+ }
- ATA.invert();
+ ATA.invert();
- Dune::FieldMatrix<T,3,4> APseudoInv;
- for (int i=0; i<3; i++)
- for (int j=0; j<4; j++) {
- APseudoInv[i][j] = 0;
- for (int k=0; k<3; k++)
- APseudoInv[i][j] += ATA[i][k] * A[j][k];
- }
+ Dune::FieldMatrix<T,3,4> APseudoInv;
+ for (int i=0; i<3; i++)
+ for (int j=0; j<4; j++) {
+ APseudoInv[i][j] = 0;
+ for (int k=0; k<3; k++)
+ APseudoInv[i][j] += ATA[i][k] * A[j][k];
+ }
- return APseudoInv;
- }
+ return APseudoInv;
+ }
- /** \brief The cayley mapping from \f$ \mathfrak{so}(3) \f$ to \f$ SO(3) \f$.
- *
- * The formula is taken from 'J.C.Simo, N.Tarnom, M.Doblare - Non-linear dynamics of
- * three-dimensional rods:Exact energy and momentum conserving algorithms'
- * (but the corrected version with 0.25 instead of 0.5 in the denominator)
- */
- static Rotation<T,3> cayley(const SkewMatrix<T,3>& s) {
- Rotation<T,3> q;
-
- Dune::FieldVector<T,3> vAxial = s.axial();
- T norm = 0.25*vAxial.two_norm2() + 1;
-
- Dune::FieldMatrix<T,3,3> mat = s.toMatrix();
- mat *= 0.5;
- Dune::FieldMatrix<T,3,3> skewSquare = mat;
- skewSquare.rightmultiply(mat);
- mat += skewSquare;
- mat *= 2/norm;
-
- for (int i=0;i<3;i++)
- mat[i][i] += 1;
-
- q.set(mat);
- return q;
- }
+ /** \brief The cayley mapping from \f$ \mathfrak{so}(3) \f$ to \f$ SO(3) \f$.
+ *
+ * The formula is taken from 'J.C.Simo, N.Tarnom, M.Doblare - Non-linear dynamics of
+ * three-dimensional rods:Exact energy and momentum conserving algorithms'
+ * (but the corrected version with 0.25 instead of 0.5 in the denominator)
+ */
+ static Rotation<T,3> cayley(const SkewMatrix<T,3>& s) {
+ Rotation<T,3> q;
+
+ Dune::FieldVector<T,3> vAxial = s.axial();
+ T norm = 0.25*vAxial.two_norm2() + 1;
+
+ Dune::FieldMatrix<T,3,3> mat = s.toMatrix();
+ mat *= 0.5;
+ Dune::FieldMatrix<T,3,3> skewSquare = mat;
+ skewSquare.rightmultiply(mat);
+ mat += skewSquare;
+ mat *= 2/norm;
+
+ for (int i=0; i<3; i++)
+ mat[i][i] += 1;
+
+ q.set(mat);
+ return q;
+ }
- /** \brief The inverse of the Cayley mapping.
- *
- * The formula is taken from J.M.Selig - Cayley Maps for SE(3).
- */
- static SkewMatrix<T,3> cayleyInv(const Rotation<T,3> q) {
+ /** \brief The inverse of the Cayley mapping.
+ *
+ * The formula is taken from J.M.Selig - Cayley Maps for SE(3).
+ */
+ static SkewMatrix<T,3> cayleyInv(const Rotation<T,3> q) {
- Dune::FieldMatrix<T,3,3> mat;
+ Dune::FieldMatrix<T,3,3> mat;
- // compute the trace of the rotation matrix
- T trace = -q[0]*q[0] -q[1]*q[1] -q[2]*q[2]+3*q[3]*q[3];
+ // compute the trace of the rotation matrix
+ T trace = -q[0]*q[0] -q[1]*q[1] -q[2]*q[2]+3*q[3]*q[3];
- if ( (trace+1)>1e-6 || (trace+1)<-1e-6) { // if this term doesn't vanish we can use a direct formula
+ if ( (trace+1)>1e-6 || (trace+1)<-1e-6) { // if this term doesn't vanish we can use a direct formula
- q.matrix(mat);
- Dune::FieldMatrix<T,3,3> matT;
- Rotation<T,3>(q.inverse()).matrix(matT);
- mat -= matT;
- mat *= 2/(1+trace);
- }
- else { // use the formula that involves the computation of an inverse
- Dune::FieldMatrix<T,3,3> inv;
- q.matrix(inv);
- Dune::FieldMatrix<T,3,3> notInv = inv;
-
- for (int i=0;i<3;i++) {
- inv[i][i] +=1;
- notInv[i][i] -=1;
- }
- inv.invert();
- mat = notInv.leftmultiply(inv);
- mat *= 2;
- }
-
- // result is a skew symmetric matrix
- SkewMatrix<T,3> res;
- res.axial()[0] = mat[2][1];
- res.axial()[1] = mat[0][2];
- res.axial()[2] = mat[1][0];
+ q.matrix(mat);
+ Dune::FieldMatrix<T,3,3> matT;
+ Rotation<T,3>(q.inverse()).matrix(matT);
+ mat -= matT;
+ mat *= 2/(1+trace);
+ }
+ else { // use the formula that involves the computation of an inverse
+ Dune::FieldMatrix<T,3,3> inv;
+ q.matrix(inv);
+ Dune::FieldMatrix<T,3,3> notInv = inv;
+
+ for (int i=0; i<3; i++) {
+ inv[i][i] +=1;
+ notInv[i][i] -=1;
+ }
+ inv.invert();
+ mat = notInv.leftmultiply(inv);
+ mat *= 2;
+ }
- return res;
+ // result is a skew symmetric matrix
+ SkewMatrix<T,3> res;
+ res.axial()[0] = mat[2][1];
+ res.axial()[1] = mat[0][2];
+ res.axial()[2] = mat[1][0];
- }
+ return res;
- static T distance(const Rotation<T,3>& a, const Rotation<T,3>& b) {
+ }
- // Distance in the unit quaternions: 2*arccos( ((a^{-1) b)_3 )
- // But note that (a^{-1}b)_3 is actually <a,b> (in R^4)
- T sp = a.globalCoordinates() * b.globalCoordinates();
+ static T distance(const Rotation<T,3>& a, const Rotation<T,3>& b) {
- // Scalar product may be larger than 1.0, due to numerical dirt
- using std::acos;
- using std::min;
- T dist = 2*acos( min(sp,T(1.0)) );
+ // Distance in the unit quaternions: 2*arccos( ((a^{-1) b)_3 )
+ // But note that (a^{-1}b)_3 is actually <a,b> (in R^4)
+ T sp = a.globalCoordinates() * b.globalCoordinates();
- // Make sure we do the right thing if a and b are not in the same sheet
- // of the double covering of the unit quaternions over SO(3)
- return (dist>=M_PI) ? (2*M_PI - dist) : dist;
- }
+ // Scalar product may be larger than 1.0, due to numerical dirt
+ using std::acos;
+ using std::min;
+ T dist = 2*acos( min(sp,T(1.0)) );
- /** \brief Compute the vector in T_aSO(3) that is mapped by the exponential map
- to the geodesic from a to b
- */
- static EmbeddedTangentVector log(const Rotation<T,3>& a, const Rotation<T,3>& b) {
+ // Make sure we do the right thing if a and b are not in the same sheet
+ // of the double covering of the unit quaternions over SO(3)
+ return (dist>=M_PI) ? (2*M_PI - dist) : dist;
+ }
- // embedded tangent vector at identity
- Quaternion<T> v;
+ /** \brief Compute the vector in T_aSO(3) that is mapped by the exponential map
+ to the geodesic from a to b
+ */
+ static EmbeddedTangentVector log(const Rotation<T,3>& a, const Rotation<T,3>& b) {
- Quaternion<T> diff = a;
- diff.invert();
- diff = diff.mult(b);
+ // embedded tangent vector at identity
+ Quaternion<T> v;
- // Compute the geodesical distance between a and b on SO(3)
- // Due to numerical dirt, diff[3] may be larger than 1.
- // In that case, use 1 instead of diff[3].
- if (diff[3] > 1.0) {
+ Quaternion<T> diff = a;
+ diff.invert();
+ diff = diff.mult(b);
- v = 0;
+ // Compute the geodesical distance between a and b on SO(3)
+ // Due to numerical dirt, diff[3] may be larger than 1.
+ // In that case, use 1 instead of diff[3].
+ if (diff[3] > 1.0) {
- } else {
+ v = 0;
- // TODO: ADOL-C does not like this part of the code,
- // because arccos is not differentiable at -1 and 1.
- // (Even though the overall 'log' function is differentiable.)
- using std::acos;
- T dist = 2*acos( diff[3] );
+ } else {
- // Make sure we do the right thing if a and b are not in the same sheet
- // of the double covering of the unit quaternions over SO(3)
- if (dist>=M_PI) {
- dist = 2*M_PI - dist;
- diff *= -1;
- }
+ // TODO: ADOL-C does not like this part of the code,
+ // because arccos is not differentiable at -1 and 1.
+ // (Even though the overall 'log' function is differentiable.)
+ using std::acos;
+ T dist = 2*acos( diff[3] );
- T invSinc = 1/sincHalf(dist);
+ // Make sure we do the right thing if a and b are not in the same sheet
+ // of the double covering of the unit quaternions over SO(3)
+ if (dist>=M_PI) {
+ dist = 2*M_PI - dist;
+ diff *= -1;
+ }
- // Compute log on T_a SO(3)
- v[0] = 0.5 * diff[0] * invSinc;
- v[1] = 0.5 * diff[1] * invSinc;
- v[2] = 0.5 * diff[2] * invSinc;
- v[3] = 0;
- }
+ T invSinc = 1/sincHalf(dist);
- // multiply with base point to get real embedded tangent vector
- return ((Quaternion<T>) a).mult(v);
+ // Compute log on T_a SO(3)
+ v[0] = 0.5 * diff[0] * invSinc;
+ v[1] = 0.5 * diff[1] * invSinc;
+ v[2] = 0.5 * diff[2] * invSinc;
+ v[3] = 0;
}
- /** \brief Compute the derivatives of the director vectors with respect to the quaternion coordinates
- *
- * Let \f$ d_k(q) = (d_{k,1}, d_{k,2}, d_{k,3})\f$ be the k-th director vector at \f$ q \f$.
- * Then the return value of this method is
- * \f[ A_{ijk} = \frac{\partial d_{i,j}}{\partial q_k} \f]
- */
- void getFirstDerivativesOfDirectors(Tensor3<T,3, 3, 4>& dd_dq) const
- {
- const Quaternion<T>& q = (*this);
+ // multiply with base point to get real embedded tangent vector
+ return ((Quaternion<T>)a).mult(v);
+ }
- dd_dq[0][0] = { 2*q[0], -2*q[1], -2*q[2], 2*q[3]};
- dd_dq[0][1] = { 2*q[1], 2*q[0], 2*q[3], 2*q[2]};
- dd_dq[0][2] = { 2*q[2], -2*q[3], 2*q[0], -2*q[1]};
+ /** \brief Compute the derivatives of the director vectors with respect to the quaternion coordinates
+ *
+ * Let \f$ d_k(q) = (d_{k,1}, d_{k,2}, d_{k,3})\f$ be the k-th director vector at \f$ q \f$.
+ * Then the return value of this method is
+ * \f[ A_{ijk} = \frac{\partial d_{i,j}}{\partial q_k} \f]
+ */
+ void getFirstDerivativesOfDirectors(Tensor3<T,3, 3, 4>& dd_dq) const
+ {
+ const Quaternion<T>& q = (*this);
- dd_dq[1][0] = { 2*q[1], 2*q[0], -2*q[3], -2*q[2]};
- dd_dq[1][1] = {-2*q[0], 2*q[1], -2*q[2], 2*q[3]};
- dd_dq[1][2] = { 2*q[3], 2*q[2], 2*q[1], 2*q[0]};
+ dd_dq[0][0] = { 2*q[0], -2*q[1], -2*q[2], 2*q[3]};
+ dd_dq[0][1] = { 2*q[1], 2*q[0], 2*q[3], 2*q[2]};
+ dd_dq[0][2] = { 2*q[2], -2*q[3], 2*q[0], -2*q[1]};
- dd_dq[2][0] = { 2*q[2], 2*q[3], 2*q[0], 2*q[1]};
- dd_dq[2][1] = {-2*q[3], 2*q[2], 2*q[1], -2*q[0]};
- dd_dq[2][2] = {-2*q[0], -2*q[1], 2*q[2], 2*q[3]};
+ dd_dq[1][0] = { 2*q[1], 2*q[0], -2*q[3], -2*q[2]};
+ dd_dq[1][1] = {-2*q[0], 2*q[1], -2*q[2], 2*q[3]};
+ dd_dq[1][2] = { 2*q[3], 2*q[2], 2*q[1], 2*q[0]};
- }
+ dd_dq[2][0] = { 2*q[2], 2*q[3], 2*q[0], 2*q[1]};
+ dd_dq[2][1] = {-2*q[3], 2*q[2], 2*q[1], -2*q[0]};
+ dd_dq[2][2] = {-2*q[0], -2*q[1], 2*q[2], 2*q[3]};
- /** \brief Compute the second derivatives of the director vectors with respect to the quaternion coordinates
- *
- * Let \f$ d_k(q) = (d_{k,1}, d_{k,2}, d_{k,3})\f$ be the k-th director vector at \f$ q \f$.
- * Then the return value of this method is
- * \f[ A_{ijkl} = \frac{\partial^2 d_{i,j}}{\partial q_k \partial q_l} \f]
- */
- static void getSecondDerivativesOfDirectors(std::array<Tensor3<T,3, 4, 4>, 3>& dd_dq_dq)
- {
- for (int i=0; i<3; i++)
- dd_dq_dq[i] = T(0);
+ }
- dd_dq_dq[0][0][0][0] = 2; dd_dq_dq[0][0][1][1] = -2; dd_dq_dq[0][0][2][2] = -2; dd_dq_dq[0][0][3][3] = 2;
- dd_dq_dq[0][1][0][1] = 2; dd_dq_dq[0][1][1][0] = 2; dd_dq_dq[0][1][2][3] = 2; dd_dq_dq[0][1][3][2] = 2;
- dd_dq_dq[0][2][0][2] = 2; dd_dq_dq[0][2][1][3] = -2; dd_dq_dq[0][2][2][0] = 2; dd_dq_dq[0][2][3][1] = -2;
+ /** \brief Compute the second derivatives of the director vectors with respect to the quaternion coordinates
+ *
+ * Let \f$ d_k(q) = (d_{k,1}, d_{k,2}, d_{k,3})\f$ be the k-th director vector at \f$ q \f$.
+ * Then the return value of this method is
+ * \f[ A_{ijkl} = \frac{\partial^2 d_{i,j}}{\partial q_k \partial q_l} \f]
+ */
+ static void getSecondDerivativesOfDirectors(std::array<Tensor3<T,3, 4, 4>, 3>& dd_dq_dq)
+ {
+ for (int i=0; i<3; i++)
+ dd_dq_dq[i] = T(0);
- dd_dq_dq[1][0][0][1] = 2; dd_dq_dq[1][0][1][0] = 2; dd_dq_dq[1][0][2][3] = -2; dd_dq_dq[1][0][3][2] = -2;
- dd_dq_dq[1][1][0][0] = -2; dd_dq_dq[1][1][1][1] = 2; dd_dq_dq[1][1][2][2] = -2; dd_dq_dq[1][1][3][3] = 2;
- dd_dq_dq[1][2][0][3] = 2; dd_dq_dq[1][2][1][2] = 2; dd_dq_dq[1][2][2][1] = 2; dd_dq_dq[1][2][3][0] = 2;
+ dd_dq_dq[0][0][0][0] = 2; dd_dq_dq[0][0][1][1] = -2; dd_dq_dq[0][0][2][2] = -2; dd_dq_dq[0][0][3][3] = 2;
+ dd_dq_dq[0][1][0][1] = 2; dd_dq_dq[0][1][1][0] = 2; dd_dq_dq[0][1][2][3] = 2; dd_dq_dq[0][1][3][2] = 2;
+ dd_dq_dq[0][2][0][2] = 2; dd_dq_dq[0][2][1][3] = -2; dd_dq_dq[0][2][2][0] = 2; dd_dq_dq[0][2][3][1] = -2;
- dd_dq_dq[2][0][0][2] = 2; dd_dq_dq[2][0][1][3] = 2; dd_dq_dq[2][0][2][0] = 2; dd_dq_dq[2][0][3][1] = 2;
- dd_dq_dq[2][1][0][3] = -2; dd_dq_dq[2][1][1][2] = 2; dd_dq_dq[2][1][2][1] = 2; dd_dq_dq[2][1][3][0] = -2;
- dd_dq_dq[2][2][0][0] = -2; dd_dq_dq[2][2][1][1] = -2; dd_dq_dq[2][2][2][2] = 2; dd_dq_dq[2][2][3][3] = 2;
+ dd_dq_dq[1][0][0][1] = 2; dd_dq_dq[1][0][1][0] = 2; dd_dq_dq[1][0][2][3] = -2; dd_dq_dq[1][0][3][2] = -2;
+ dd_dq_dq[1][1][0][0] = -2; dd_dq_dq[1][1][1][1] = 2; dd_dq_dq[1][1][2][2] = -2; dd_dq_dq[1][1][3][3] = 2;
+ dd_dq_dq[1][2][0][3] = 2; dd_dq_dq[1][2][1][2] = 2; dd_dq_dq[1][2][2][1] = 2; dd_dq_dq[1][2][3][0] = 2;
- }
+ dd_dq_dq[2][0][0][2] = 2; dd_dq_dq[2][0][1][3] = 2; dd_dq_dq[2][0][2][0] = 2; dd_dq_dq[2][0][3][1] = 2;
+ dd_dq_dq[2][1][0][3] = -2; dd_dq_dq[2][1][1][2] = 2; dd_dq_dq[2][1][2][1] = 2; dd_dq_dq[2][1][3][0] = -2;
+ dd_dq_dq[2][2][0][0] = -2; dd_dq_dq[2][2][1][1] = -2; dd_dq_dq[2][2][2][2] = 2; dd_dq_dq[2][2][3][3] = 2;
- /** \brief Transform tangent vectors from quaternion representation to matrix representation
- *
- * This class represents rotations as unit quaternions, and therefore variations of rotations
- * (i.e., tangent vector) are represented in quaternion space, too. However, some applications
- * require the tangent vectors as matrices. To obtain matrix coordinates we use the
- * chain rule, which means that we have to multiply the given derivative with
- * the derivative of the embedding of the unit quaternion into the space of 3x3 matrices.
- * This second derivative is almost given by the method getFirstDerivativesOfDirectors.
- * However, since the directors of a given unit quaternion are the _columns_ of the
- * corresponding orthogonal matrix, we need to invert the i and j indices
- *
- * As a typical GFE assembler will require this for several tangent vectors at once,
- * the implementation here is a vector one: It allows to treat several tangent vectors
- * together, which have to come as the columns of the `derivative` parameter.
- *
- * So, if I am not mistaken, result[i][j][k] contains \partial R_ij / \partial k
- *
- * \param derivative Tangent vector in quaternion coordinates
- * \returns DR Tangent vector in matrix coordinates
- */
- template <int blocksize>
- Tensor3<T,3,3,blocksize> quaternionTangentToMatrixTangent(const Dune::FieldMatrix<T,4,blocksize>& derivative) const
- {
- Tensor3<T,3,3,blocksize> result = T(0);
+ }
- Tensor3<T,3 , 3, 4> dd_dq;
- getFirstDerivativesOfDirectors(dd_dq);
+ /** \brief Transform tangent vectors from quaternion representation to matrix representation
+ *
+ * This class represents rotations as unit quaternions, and therefore variations of rotations
+ * (i.e., tangent vector) are represented in quaternion space, too. However, some applications
+ * require the tangent vectors as matrices. To obtain matrix coordinates we use the
+ * chain rule, which means that we have to multiply the given derivative with
+ * the derivative of the embedding of the unit quaternion into the space of 3x3 matrices.
+ * This second derivative is almost given by the method getFirstDerivativesOfDirectors.
+ * However, since the directors of a given unit quaternion are the _columns_ of the
+ * corresponding orthogonal matrix, we need to invert the i and j indices
+ *
+ * As a typical GFE assembler will require this for several tangent vectors at once,
+ * the implementation here is a vector one: It allows to treat several tangent vectors
+ * together, which have to come as the columns of the `derivative` parameter.
+ *
+ * So, if I am not mistaken, result[i][j][k] contains \partial R_ij / \partial k
+ *
+ * \param derivative Tangent vector in quaternion coordinates
+ * \returns DR Tangent vector in matrix coordinates
+ */
+ template <int blocksize>
+ Tensor3<T,3,3,blocksize> quaternionTangentToMatrixTangent(const Dune::FieldMatrix<T,4,blocksize>& derivative) const
+ {
+ Tensor3<T,3,3,blocksize> result = T(0);
- for (int i=0; i<3; i++)
- for (int j=0; j<3; j++)
- for (int k=0; k<blocksize; k++)
- for (int l=0; l<4; l++)
- result[i][j][k] += dd_dq[j][i][l] * derivative[l][k];
+ Tensor3<T,3 , 3, 4> dd_dq;
+ getFirstDerivativesOfDirectors(dd_dq);
- return result;
- }
+ for (int i=0; i<3; i++)
+ for (int j=0; j<3; j++)
+ for (int k=0; k<blocksize; k++)
+ for (int l=0; l<4; l++)
+ result[i][j][k] += dd_dq[j][i][l] * derivative[l][k];
- /** \brief Compute the derivative of the squared distance function with respect to the second argument
- *
- * The squared distance function is
- * \f[ 4 \arccos^2 (|<p,q>|) \f]
- * Deriving this with respect to the second coordinate gives
- * \f[ 4 (\arccos^2)'(x)|_{x = |<p,q>|} * P_qp \f]
- * The whole thing has to be multiplied by -1 if \f$ <p,q> \f$ is negative
- */
- static EmbeddedTangentVector derivativeOfDistanceSquaredWRTSecondArgument(const Rotation<T,3>& p,
- const Rotation<T,3>& q) {
- T sp = p.globalCoordinates() * q.globalCoordinates();
-
- // Compute the projection of p onto the tangent space of q
- EmbeddedTangentVector result = p;
- result.axpy(-1*(q*p), q);
-
- // The ternary operator comes from the derivative of the absolute value function
- using std::abs;
- result *= 4 * UnitVector<T,4>::derivativeOfArcCosSquared(abs(sp)) * ( (sp<0) ? -1 : 1 );
-
- return result;
- }
+ return result;
+ }
- /** \brief Compute the Hessian of the squared distance function keeping the first argument fixed */
- static Dune::SymmetricMatrix<T,4> secondDerivativeOfDistanceSquaredWRTSecondArgument(const Rotation<T,3>& p, const Rotation<T,3>& q) {
+ /** \brief Compute the derivative of the squared distance function with respect to the second argument
+ *
+ * The squared distance function is
+ * \f[ 4 \arccos^2 (|<p,q>|) \f]
+ * Deriving this with respect to the second coordinate gives
+ * \f[ 4 (\arccos^2)'(x)|_{x = |<p,q>|} * P_qp \f]
+ * The whole thing has to be multiplied by -1 if \f$ <p,q> \f$ is negative
+ */
+ static EmbeddedTangentVector derivativeOfDistanceSquaredWRTSecondArgument(const Rotation<T,3>& p,
+ const Rotation<T,3>& q) {
+ T sp = p.globalCoordinates() * q.globalCoordinates();
+
+ // Compute the projection of p onto the tangent space of q
+ EmbeddedTangentVector result = p;
+ result.axpy(-1*(q*p), q);
+
+ // The ternary operator comes from the derivative of the absolute value function
+ using std::abs;
+ result *= 4 * UnitVector<T,4>::derivativeOfArcCosSquared(abs(sp)) * ( (sp<0) ? -1 : 1 );
+
+ return result;
+ }
- T sp = p.globalCoordinates() * q.globalCoordinates();
+ /** \brief Compute the Hessian of the squared distance function keeping the first argument fixed */
+ static Dune::SymmetricMatrix<T,4> secondDerivativeOfDistanceSquaredWRTSecondArgument(const Rotation<T,3>& p, const Rotation<T,3>& q) {
- EmbeddedTangentVector pProjected = q.projectOntoTangentSpace(p.globalCoordinates());
+ T sp = p.globalCoordinates() * q.globalCoordinates();
- Dune::SymmetricMatrix<T,4> A;
- for (int i=0; i<4; i++)
- for (int j=0; j<=i; j++)
- A(i,j) = pProjected[i]*pProjected[j];
+ EmbeddedTangentVector pProjected = q.projectOntoTangentSpace(p.globalCoordinates());
- using std::abs;
- A *= 4*UnitVector<T,4>::secondDerivativeOfArcCosSquared(abs(sp));
+ Dune::SymmetricMatrix<T,4> A;
+ for (int i=0; i<4; i++)
+ for (int j=0; j<=i; j++)
+ A(i,j) = pProjected[i]*pProjected[j];
- // Compute matrix B (see notes)
- Dune::SymmetricMatrix<T,4> Pq;
- for (int i=0; i<4; i++)
- for (int j=0; j<=i; j++)
- Pq(i,j) = (i==j) - q.globalCoordinates()[i]*q.globalCoordinates()[j];
+ using std::abs;
+ A *= 4*UnitVector<T,4>::secondDerivativeOfArcCosSquared(abs(sp));
- // Bring it all together
- A.axpy(-4* ((sp<0) ? -1 : 1) * UnitVector<T,4>::derivativeOfArcCosSquared(abs(sp))*sp, Pq);
+ // Compute matrix B (see notes)
+ Dune::SymmetricMatrix<T,4> Pq;
+ for (int i=0; i<4; i++)
+ for (int j=0; j<=i; j++)
+ Pq(i,j) = (i==j) - q.globalCoordinates()[i]*q.globalCoordinates()[j];
- return A;
- }
+ // Bring it all together
+ A.axpy(-4* ((sp<0) ? -1 : 1) * UnitVector<T,4>::derivativeOfArcCosSquared(abs(sp))*sp, Pq);
- /** \brief Compute the mixed second derivate \partial d^2 / \partial dp dq */
- static Dune::FieldMatrix<T,4,4> secondDerivativeOfDistanceSquaredWRTFirstAndSecondArgument(const Rotation<T,3>& p, const Rotation<T,3>& q) {
+ return A;
+ }
- T sp = p.globalCoordinates() * q.globalCoordinates();
+ /** \brief Compute the mixed second derivate \partial d^2 / \partial dp dq */
+ static Dune::FieldMatrix<T,4,4> secondDerivativeOfDistanceSquaredWRTFirstAndSecondArgument(const Rotation<T,3>& p, const Rotation<T,3>& q) {
- // Compute vector A (see notes)
- Dune::FieldMatrix<T,1,4> row;
- row[0] = q.projectOntoTangentSpace(p.globalCoordinates());
+ T sp = p.globalCoordinates() * q.globalCoordinates();
- EmbeddedTangentVector tmp = p.projectOntoTangentSpace(q.globalCoordinates());
- Dune::FieldMatrix<T,4,1> column;
- for (int i=0; i<4; i++) // turn row vector into column vector
- column[i] = tmp[i];
+ // Compute vector A (see notes)
+ Dune::FieldMatrix<T,1,4> row;
+ row[0] = q.projectOntoTangentSpace(p.globalCoordinates());
- Dune::FieldMatrix<T,4,4> A;
- // A = row * column
- Dune::FMatrixHelp::multMatrix(column,row,A);
- using std::abs;
- A *= 4 * UnitVector<T,4>::secondDerivativeOfArcCosSquared(abs(sp));
+ EmbeddedTangentVector tmp = p.projectOntoTangentSpace(q.globalCoordinates());
+ Dune::FieldMatrix<T,4,1> column;
+ for (int i=0; i<4; i++) // turn row vector into column vector
+ column[i] = tmp[i];
- // Compute matrix B (see notes)
- Dune::FieldMatrix<T,4,4> Pp, Pq;
- for (int i=0; i<4; i++)
- for (int j=0; j<4; j++) {
- Pp[i][j] = (i==j) - p.globalCoordinates()[i]*p.globalCoordinates()[j];
- Pq[i][j] = (i==j) - q.globalCoordinates()[i]*q.globalCoordinates()[j];
- }
+ Dune::FieldMatrix<T,4,4> A;
+ // A = row * column
+ Dune::FMatrixHelp::multMatrix(column,row,A);
+ using std::abs;
+ A *= 4 * UnitVector<T,4>::secondDerivativeOfArcCosSquared(abs(sp));
- Dune::FieldMatrix<T,4,4> B;
- Dune::FMatrixHelp::multMatrix(Pp,Pq,B);
+ // Compute matrix B (see notes)
+ Dune::FieldMatrix<T,4,4> Pp, Pq;
+ for (int i=0; i<4; i++)
+ for (int j=0; j<4; j++) {
+ Pp[i][j] = (i==j) - p.globalCoordinates()[i]*p.globalCoordinates()[j];
+ Pq[i][j] = (i==j) - q.globalCoordinates()[i]*q.globalCoordinates()[j];
+ }
- // Bring it all together
- A.axpy(4 * ( (sp<0) ? -1 : 1) * UnitVector<T,4>::derivativeOfArcCosSquared(abs(sp)), B);
+ Dune::FieldMatrix<T,4,4> B;
+ Dune::FMatrixHelp::multMatrix(Pp,Pq,B);
- return A;
- }
+ // Bring it all together
+ A.axpy(4 * ( (sp<0) ? -1 : 1) * UnitVector<T,4>::derivativeOfArcCosSquared(abs(sp)), B);
- /** \brief Compute the third derivative \partial d^3 / \partial dq^3
+ return A;
+ }
- Unlike the distance itself the squared distance is differentiable at zero
- */
- static Tensor3<T,4,4,4> thirdDerivativeOfDistanceSquaredWRTSecondArgument(const Rotation<T,3>& p, const Rotation<T,3>& q) {
+ /** \brief Compute the third derivative \partial d^3 / \partial dq^3
- Tensor3<T,4,4,4> result;
+ Unlike the distance itself the squared distance is differentiable at zero
+ */
+ static Tensor3<T,4,4,4> thirdDerivativeOfDistanceSquaredWRTSecondArgument(const Rotation<T,3>& p, const Rotation<T,3>& q) {
- T sp = p.globalCoordinates() * q.globalCoordinates();
+ Tensor3<T,4,4,4> result;
- // The projection matrix onto the tangent space at p and q
- Dune::FieldMatrix<T,4,4> Pq;
- for (int i=0; i<4; i++)
- for (int j=0; j<4; j++)
- Pq[i][j] = (i==j) - q.globalCoordinates()[i]*q.globalCoordinates()[j];
+ T sp = p.globalCoordinates() * q.globalCoordinates();
- EmbeddedTangentVector pProjected = q.projectOntoTangentSpace(p.globalCoordinates());
+ // The projection matrix onto the tangent space at p and q
+ Dune::FieldMatrix<T,4,4> Pq;
+ for (int i=0; i<4; i++)
+ for (int j=0; j<4; j++)
+ Pq[i][j] = (i==j) - q.globalCoordinates()[i]*q.globalCoordinates()[j];
- double plusMinus = (sp < 0) ? -1 : 1;
+ EmbeddedTangentVector pProjected = q.projectOntoTangentSpace(p.globalCoordinates());
- using std::abs;
- for (int i=0; i<4; i++)
- for (int j=0; j<4; j++)
- for (int k=0; k<4; k++) {
+ double plusMinus = (sp < 0) ? -1 : 1;
- result[i][j][k] = plusMinus * UnitVector<T,4>::thirdDerivativeOfArcCosSquared(abs(sp)) * pProjected[i] * pProjected[j] * pProjected[k]
- - UnitVector<T,4>::secondDerivativeOfArcCosSquared(abs(sp)) * ((i==j)*sp + p.globalCoordinates()[i]*q.globalCoordinates()[j])*pProjected[k]
- - UnitVector<T,4>::secondDerivativeOfArcCosSquared(abs(sp)) * ((i==k)*sp + p.globalCoordinates()[i]*q.globalCoordinates()[k])*pProjected[j]
- - UnitVector<T,4>::secondDerivativeOfArcCosSquared(abs(sp)) * pProjected[i] * Pq[j][k] * sp
- + plusMinus * UnitVector<T,4>::derivativeOfArcCosSquared(abs(sp)) * ((i==j)*q.globalCoordinates()[k] + (i==k)*q.globalCoordinates()[j]) * sp
- - plusMinus * UnitVector<T,4>::derivativeOfArcCosSquared(abs(sp)) * p.globalCoordinates()[i] * Pq[j][k];
- }
+ using std::abs;
+ for (int i=0; i<4; i++)
+ for (int j=0; j<4; j++)
+ for (int k=0; k<4; k++) {
- Pq *= 4;
- result = Pq * result;
+ result[i][j][k] = plusMinus * UnitVector<T,4>::thirdDerivativeOfArcCosSquared(abs(sp)) * pProjected[i] * pProjected[j] * pProjected[k]
+ - UnitVector<T,4>::secondDerivativeOfArcCosSquared(abs(sp)) * ((i==j)*sp + p.globalCoordinates()[i]*q.globalCoordinates()[j])*pProjected[k]
+ - UnitVector<T,4>::secondDerivativeOfArcCosSquared(abs(sp)) * ((i==k)*sp + p.globalCoordinates()[i]*q.globalCoordinates()[k])*pProjected[j]
+ - UnitVector<T,4>::secondDerivativeOfArcCosSquared(abs(sp)) * pProjected[i] * Pq[j][k] * sp
+ + plusMinus * UnitVector<T,4>::derivativeOfArcCosSquared(abs(sp)) * ((i==j)*q.globalCoordinates()[k] + (i==k)*q.globalCoordinates()[j]) * sp
+ - plusMinus * UnitVector<T,4>::derivativeOfArcCosSquared(abs(sp)) * p.globalCoordinates()[i] * Pq[j][k];
+ }
- return result;
- }
+ Pq *= 4;
+ result = Pq * result;
- /** \brief Compute the mixed third derivative \partial d^3 / \partial da db^2
+ return result;
+ }
- Unlike the distance itself the squared distance is differentiable at zero
- */
- static Tensor3<T,4,4,4> thirdDerivativeOfDistanceSquaredWRTFirst1AndSecond2Argument(const Rotation<T,3>& p, const Rotation<T,3>& q) {
+ /** \brief Compute the mixed third derivative \partial d^3 / \partial da db^2
- Tensor3<T,4,4,4> result;
+ Unlike the distance itself the squared distance is differentiable at zero
+ */
+ static Tensor3<T,4,4,4> thirdDerivativeOfDistanceSquaredWRTFirst1AndSecond2Argument(const Rotation<T,3>& p, const Rotation<T,3>& q) {
- T sp = p.globalCoordinates() * q.globalCoordinates();
+ Tensor3<T,4,4,4> result;
- // The projection matrix onto the tangent space at p and q
- Dune::FieldMatrix<T,4,4> Pp, Pq;
- for (int i=0; i<4; i++)
- for (int j=0; j<4; j++) {
- Pp[i][j] = (i==j) - p.globalCoordinates()[i]*p.globalCoordinates()[j];
- Pq[i][j] = (i==j) - q.globalCoordinates()[i]*q.globalCoordinates()[j];
- }
+ T sp = p.globalCoordinates() * q.globalCoordinates();
- EmbeddedTangentVector pProjected = q.projectOntoTangentSpace(p.globalCoordinates());
- EmbeddedTangentVector qProjected = p.projectOntoTangentSpace(q.globalCoordinates());
+ // The projection matrix onto the tangent space at p and q
+ Dune::FieldMatrix<T,4,4> Pp, Pq;
+ for (int i=0; i<4; i++)
+ for (int j=0; j<4; j++) {
+ Pp[i][j] = (i==j) - p.globalCoordinates()[i]*p.globalCoordinates()[j];
+ Pq[i][j] = (i==j) - q.globalCoordinates()[i]*q.globalCoordinates()[j];
+ }
- Tensor3<T,4,4,4> derivativeOfPqOTimesPq;
- for (int i=0; i<4; i++)
- for (int j=0; j<4; j++)
- for (int k=0; k<4; k++) {
- derivativeOfPqOTimesPq[i][j][k] = 0;
- for (int l=0; l<4; l++)
- derivativeOfPqOTimesPq[i][j][k] += Pp[i][l] * (Pq[j][l]*pProjected[k] + pProjected[j]*Pq[k][l]);
- }
+ EmbeddedTangentVector pProjected = q.projectOntoTangentSpace(p.globalCoordinates());
+ EmbeddedTangentVector qProjected = p.projectOntoTangentSpace(q.globalCoordinates());
- double plusMinus = (sp < 0) ? -1 : 1;
+ Tensor3<T,4,4,4> derivativeOfPqOTimesPq;
+ for (int i=0; i<4; i++)
+ for (int j=0; j<4; j++)
+ for (int k=0; k<4; k++) {
+ derivativeOfPqOTimesPq[i][j][k] = 0;
+ for (int l=0; l<4; l++)
+ derivativeOfPqOTimesPq[i][j][k] += Pp[i][l] * (Pq[j][l]*pProjected[k] + pProjected[j]*Pq[k][l]);
+ }
- using std::abs;
- result = plusMinus * UnitVector<T,4>::thirdDerivativeOfArcCosSquared(abs(sp)) * Tensor3<T,4,4,4>::product(qProjected,pProjected,pProjected)
- + UnitVector<T,4>::secondDerivativeOfArcCosSquared(abs(sp)) * derivativeOfPqOTimesPq
- - UnitVector<T,4>::secondDerivativeOfArcCosSquared(abs(sp)) * sp * Tensor3<T,4,4,4>::product(qProjected,Pq)
- - plusMinus * UnitVector<T,4>::derivativeOfArcCosSquared(abs(sp)) * Tensor3<T,4,4,4>::product(qProjected,Pq);
+ double plusMinus = (sp < 0) ? -1 : 1;
- result *= 4;
+ using std::abs;
+ result = plusMinus * UnitVector<T,4>::thirdDerivativeOfArcCosSquared(abs(sp)) * Tensor3<T,4,4,4>::product(qProjected,pProjected,pProjected)
+ + UnitVector<T,4>::secondDerivativeOfArcCosSquared(abs(sp)) * derivativeOfPqOTimesPq
+ - UnitVector<T,4>::secondDerivativeOfArcCosSquared(abs(sp)) * sp * Tensor3<T,4,4,4>::product(qProjected,Pq)
+ - plusMinus * UnitVector<T,4>::derivativeOfArcCosSquared(abs(sp)) * Tensor3<T,4,4,4>::product(qProjected,Pq);
- return result;
+ result *= 4;
- }
+ return result;
+ }
- /** \brief Interpolate between two rotations */
- static Rotation<T,3> interpolate(const Rotation<T,3>& a, const Rotation<T,3>& b, T omega) {
- // Compute log on T_a SO(3)
- EmbeddedTangentVector v = log(a,b);
- return exp(a, omega*v);
- }
+ /** \brief Interpolate between two rotations */
+ static Rotation<T,3> interpolate(const Rotation<T,3>& a, const Rotation<T,3>& b, T omega) {
- /** \brief Interpolate between two rotations
- \param omega must be between 0 and 1
- */
- static Quaternion<T> interpolateDerivative(const Rotation<T,3>& a, const Rotation<T,3>& b,
- T omega) {
- Quaternion<T> result(0);
+ // Compute log on T_a SO(3)
+ EmbeddedTangentVector v = log(a,b);
+ return exp(a, omega*v);
+ }
- // Compute log on T_a SO(3)
- SkewMatrix<T,3> xi = log(a,b);
+ /** \brief Interpolate between two rotations
+ \param omega must be between 0 and 1
+ */
+ static Quaternion<T> interpolateDerivative(const Rotation<T,3>& a, const Rotation<T,3>& b,
+ T omega) {
+ Quaternion<T> result(0);
- SkewMatrix<T,3> v = xi;
- v *= omega;
+ // Compute log on T_a SO(3)
+ SkewMatrix<T,3> xi = log(a,b);
- // //////////////////////////////////////////////////////////////
- // v now contains the derivative at 'a'. The derivative at
- // the requested site is v pushed forward by Dexp.
- // /////////////////////////////////////////////////////////////
+ SkewMatrix<T,3> v = xi;
+ v *= omega;
- Dune::FieldMatrix<T,4,3> diffExp = Dexp(v);
+ // //////////////////////////////////////////////////////////////
+ // v now contains the derivative at 'a'. The derivative at
+ // the requested site is v pushed forward by Dexp.
+ // /////////////////////////////////////////////////////////////
- diffExp.umv(xi.axial(),result);
+ Dune::FieldMatrix<T,4,3> diffExp = Dexp(v);
- return a.Quaternion<T>::mult(result);
- }
+ diffExp.umv(xi.axial(),result);
- /** \brief Return the corresponding orthogonal matrix */
- void matrix(Dune::FieldMatrix<T,3,3>& m) const {
+ return a.Quaternion<T>::mult(result);
+ }
- m[0][0] = (*this)[0]*(*this)[0] - (*this)[1]*(*this)[1] - (*this)[2]*(*this)[2] + (*this)[3]*(*this)[3];
- m[0][1] = 2 * ( (*this)[0]*(*this)[1] - (*this)[2]*(*this)[3] );
- m[0][2] = 2 * ( (*this)[0]*(*this)[2] + (*this)[1]*(*this)[3] );
+ /** \brief Return the corresponding orthogonal matrix */
+ void matrix(Dune::FieldMatrix<T,3,3>& m) const {
- m[1][0] = 2 * ( (*this)[0]*(*this)[1] + (*this)[2]*(*this)[3] );
- m[1][1] = - (*this)[0]*(*this)[0] + (*this)[1]*(*this)[1] - (*this)[2]*(*this)[2] + (*this)[3]*(*this)[3];
- m[1][2] = 2 * ( -(*this)[0]*(*this)[3] + (*this)[1]*(*this)[2] );
+ m[0][0] = (*this)[0]*(*this)[0] - (*this)[1]*(*this)[1] - (*this)[2]*(*this)[2] + (*this)[3]*(*this)[3];
+ m[0][1] = 2 * ( (*this)[0]*(*this)[1] - (*this)[2]*(*this)[3] );
+ m[0][2] = 2 * ( (*this)[0]*(*this)[2] + (*this)[1]*(*this)[3] );
- m[2][0] = 2 * ( (*this)[0]*(*this)[2] - (*this)[1]*(*this)[3] );
- m[2][1] = 2 * ( (*this)[0]*(*this)[3] + (*this)[1]*(*this)[2] );
- m[2][2] = - (*this)[0]*(*this)[0] - (*this)[1]*(*this)[1] + (*this)[2]*(*this)[2] + (*this)[3]*(*this)[3];
+ m[1][0] = 2 * ( (*this)[0]*(*this)[1] + (*this)[2]*(*this)[3] );
+ m[1][1] = - (*this)[0]*(*this)[0] + (*this)[1]*(*this)[1] - (*this)[2]*(*this)[2] + (*this)[3]*(*this)[3];
+ m[1][2] = 2 * ( -(*this)[0]*(*this)[3] + (*this)[1]*(*this)[2] );
- }
+ m[2][0] = 2 * ( (*this)[0]*(*this)[2] - (*this)[1]*(*this)[3] );
+ m[2][1] = 2 * ( (*this)[0]*(*this)[3] + (*this)[1]*(*this)[2] );
+ m[2][2] = - (*this)[0]*(*this)[0] - (*this)[1]*(*this)[1] + (*this)[2]*(*this)[2] + (*this)[3]*(*this)[3];
- /** \brief Derivative of the map from unit quaternions to orthogonal matrices
- */
- static Tensor3<T,3,3,4> derivativeOfQuaternionToMatrix(const Dune::FieldVector<T,4>& p)
- {
- Tensor3<T,3,3,4> result;
+ }
- result[0][0] = { 2*p[0], -2*p[1], -2*p[2], 2*p[3]};
- result[0][1] = { 2*p[1], 2*p[0], -2*p[3], -2*p[2]};
- result[0][2] = { 2*p[2], 2*p[3], 2*p[0], 2*p[1]};
+ /** \brief Derivative of the map from unit quaternions to orthogonal matrices
+ */
+ static Tensor3<T,3,3,4> derivativeOfQuaternionToMatrix(const Dune::FieldVector<T,4>& p)
+ {
+ Tensor3<T,3,3,4> result;
- result[1][0] = { 2*p[1], 2*p[0], 2*p[3], 2*p[2]};
- result[1][1] = {-2*p[0], 2*p[1], -2*p[2], 2*p[3]};
- result[1][2] = {-2*p[3], 2*p[2], 2*p[1], -2*p[0]};
+ result[0][0] = { 2*p[0], -2*p[1], -2*p[2], 2*p[3]};
+ result[0][1] = { 2*p[1], 2*p[0], -2*p[3], -2*p[2]};
+ result[0][2] = { 2*p[2], 2*p[3], 2*p[0], 2*p[1]};
- result[2][0] = { 2*p[2], -2*p[3], 2*p[0], -2*p[1]};
- result[2][1] = { 2*p[3], 2*p[2], 2*p[1], 2*p[0]};
- result[2][2] = {-2*p[0], -2*p[1], 2*p[2], 2*p[3]};
+ result[1][0] = { 2*p[1], 2*p[0], 2*p[3], 2*p[2]};
+ result[1][1] = {-2*p[0], 2*p[1], -2*p[2], 2*p[3]};
+ result[1][2] = {-2*p[3], 2*p[2], 2*p[1], -2*p[0]};
- return result;
- }
+ result[2][0] = { 2*p[2], -2*p[3], 2*p[0], -2*p[1]};
+ result[2][1] = { 2*p[3], 2*p[2], 2*p[1], 2*p[0]};
+ result[2][2] = {-2*p[0], -2*p[1], 2*p[2], 2*p[3]};
- /** \brief Set rotation from orthogonal matrix
+ return result;
+ }
- We tacitly assume that the matrix really is orthogonal */
- void set(const Dune::FieldMatrix<T,3,3>& m) {
+ /** \brief Set rotation from orthogonal matrix
- using std::sqrt;
+ We tacitly assume that the matrix really is orthogonal */
+ void set(const Dune::FieldMatrix<T,3,3>& m) {
- // Easier writing
- Dune::FieldVector<T,4>& p = (*this);
- // The following equations for the derivation of a unit quaternion from a rotation
- // matrix comes from 'E. Salamin, Application of Quaternions to Computation with
- // Rotations, Technical Report, Stanford, 1974'
+ using std::sqrt;
- p[0] = (1 + m[0][0] - m[1][1] - m[2][2]) / 4;
- p[1] = (1 - m[0][0] + m[1][1] - m[2][2]) / 4;
- p[2] = (1 - m[0][0] - m[1][1] + m[2][2]) / 4;
- p[3] = (1 + m[0][0] + m[1][1] + m[2][2]) / 4;
+ // Easier writing
+ Dune::FieldVector<T,4>& p = (*this);
+ // The following equations for the derivation of a unit quaternion from a rotation
+ // matrix comes from 'E. Salamin, Application of Quaternions to Computation with
+ // Rotations, Technical Report, Stanford, 1974'
- // avoid rounding problems
- if (p[0] >= p[1] && p[0] >= p[2] && p[0] >= p[3]) {
+ p[0] = (1 + m[0][0] - m[1][1] - m[2][2]) / 4;
+ p[1] = (1 - m[0][0] + m[1][1] - m[2][2]) / 4;
+ p[2] = (1 - m[0][0] - m[1][1] + m[2][2]) / 4;
+ p[3] = (1 + m[0][0] + m[1][1] + m[2][2]) / 4;
- p[0] = sqrt(p[0]);
+ // avoid rounding problems
+ if (p[0] >= p[1] && p[0] >= p[2] && p[0] >= p[3]) {
- // r_x r_y = (R_12 + R_21) / 4
- p[1] = (m[0][1] + m[1][0]) / 4 / p[0];
+ p[0] = sqrt(p[0]);
- // r_x r_z = (R_13 + R_31) / 4
- p[2] = (m[0][2] + m[2][0]) / 4 / p[0];
+ // r_x r_y = (R_12 + R_21) / 4
+ p[1] = (m[0][1] + m[1][0]) / 4 / p[0];
- // r_0 r_x = (R_32 - R_23) / 4
- p[3] = (m[2][1] - m[1][2]) / 4 / p[0];
+ // r_x r_z = (R_13 + R_31) / 4
+ p[2] = (m[0][2] + m[2][0]) / 4 / p[0];
- } else if (p[1] >= p[0] && p[1] >= p[2] && p[1] >= p[3]) {
+ // r_0 r_x = (R_32 - R_23) / 4
+ p[3] = (m[2][1] - m[1][2]) / 4 / p[0];
- p[1] = sqrt(p[1]);
+ } else if (p[1] >= p[0] && p[1] >= p[2] && p[1] >= p[3]) {
- // r_x r_y = (R_12 + R_21) / 4
- p[0] = (m[0][1] + m[1][0]) / 4 / p[1];
+ p[1] = sqrt(p[1]);
- // r_y r_z = (R_23 + R_32) / 4
- p[2] = (m[1][2] + m[2][1]) / 4 / p[1];
+ // r_x r_y = (R_12 + R_21) / 4
+ p[0] = (m[0][1] + m[1][0]) / 4 / p[1];
- // r_0 r_y = (R_13 - R_31) / 4
- p[3] = (m[0][2] - m[2][0]) / 4 / p[1];
+ // r_y r_z = (R_23 + R_32) / 4
+ p[2] = (m[1][2] + m[2][1]) / 4 / p[1];
- } else if (p[2] >= p[0] && p[2] >= p[1] && p[2] >= p[3]) {
+ // r_0 r_y = (R_13 - R_31) / 4
+ p[3] = (m[0][2] - m[2][0]) / 4 / p[1];
- p[2] = sqrt(p[2]);
+ } else if (p[2] >= p[0] && p[2] >= p[1] && p[2] >= p[3]) {
- // r_x r_z = (R_13 + R_31) / 4
- p[0] = (m[0][2] + m[2][0]) / 4 / p[2];
+ p[2] = sqrt(p[2]);
- // r_y r_z = (R_23 + R_32) / 4
- p[1] = (m[1][2] + m[2][1]) / 4 / p[2];
+ // r_x r_z = (R_13 + R_31) / 4
+ p[0] = (m[0][2] + m[2][0]) / 4 / p[2];
- // r_0 r_z = (R_21 - R_12) / 4
- p[3] = (m[1][0] - m[0][1]) / 4 / p[2];
+ // r_y r_z = (R_23 + R_32) / 4
+ p[1] = (m[1][2] + m[2][1]) / 4 / p[2];
- } else {
+ // r_0 r_z = (R_21 - R_12) / 4
+ p[3] = (m[1][0] - m[0][1]) / 4 / p[2];
- p[3] = sqrt(p[3]);
+ } else {
- // r_0 r_x = (R_32 - R_23) / 4
- p[0] = (m[2][1] - m[1][2]) / 4 / p[3];
+ p[3] = sqrt(p[3]);
- // r_0 r_y = (R_13 - R_31) / 4
- p[1] = (m[0][2] - m[2][0]) / 4 / p[3];
+ // r_0 r_x = (R_32 - R_23) / 4
+ p[0] = (m[2][1] - m[1][2]) / 4 / p[3];
- // r_0 r_z = (R_21 - R_12) / 4
- p[2] = (m[1][0] - m[0][1]) / 4 / p[3];
+ // r_0 r_y = (R_13 - R_31) / 4
+ p[1] = (m[0][2] - m[2][0]) / 4 / p[3];
- }
+ // r_0 r_z = (R_21 - R_12) / 4
+ p[2] = (m[1][0] - m[0][1]) / 4 / p[3];
}
- /** \brief Derivative of the map from orthogonal matrices to unit quaternions
+ }
- We tacitly assume that the matrix really is orthogonal */
- static Tensor3<T,4,3,3> derivativeOfMatrixToQuaternion(const Dune::FieldMatrix<T,3,3>& m)
- {
- using std::pow;
- using std::sqrt;
+ /** \brief Derivative of the map from orthogonal matrices to unit quaternions
- Tensor3<T,4,3,3> result;
+ We tacitly assume that the matrix really is orthogonal */
+ static Tensor3<T,4,3,3> derivativeOfMatrixToQuaternion(const Dune::FieldMatrix<T,3,3>& m)
+ {
+ using std::pow;
+ using std::sqrt;
- Dune::FieldVector<T,4> p;
+ Tensor3<T,4,3,3> result;
- // The following equations for the derivation of a unit quaternion from a rotation
- // matrix comes from 'E. Salamin, Application of Quaternions to Computation with
- // Rotations, Technical Report, Stanford, 1974'
+ Dune::FieldVector<T,4> p;
- p[0] = (1 + m[0][0] - m[1][1] - m[2][2]) / 4;
- p[1] = (1 - m[0][0] + m[1][1] - m[2][2]) / 4;
- p[2] = (1 - m[0][0] - m[1][1] + m[2][2]) / 4;
- p[3] = (1 + m[0][0] + m[1][1] + m[2][2]) / 4;
+ // The following equations for the derivation of a unit quaternion from a rotation
+ // matrix comes from 'E. Salamin, Application of Quaternions to Computation with
+ // Rotations, Technical Report, Stanford, 1974'
- // avoid rounding problems
- if (p[0] >= p[1] && p[0] >= p[2] && p[0] >= p[3])
- {
- result[0] = {{1,0,0},{0,-1,0},{0,0,-1}};
- result[0] *= 1.0/(8.0*sqrt(p[0]));
+ p[0] = (1 + m[0][0] - m[1][1] - m[2][2]) / 4;
+ p[1] = (1 - m[0][0] + m[1][1] - m[2][2]) / 4;
+ p[2] = (1 - m[0][0] - m[1][1] + m[2][2]) / 4;
+ p[3] = (1 + m[0][0] + m[1][1] + m[2][2]) / 4;
- T denom = 32 * pow(p[0],1.5);
- T offDiag = 1.0/(4*sqrt(p[0]));
+ // avoid rounding problems
+ if (p[0] >= p[1] && p[0] >= p[2] && p[0] >= p[3])
+ {
+ result[0] = {{1,0,0},{0,-1,0},{0,0,-1}};
+ result[0] *= 1.0/(8.0*sqrt(p[0]));
- result[1] = { {-(m[0][1]+m[1][0]) / denom, offDiag, 0},
- {offDiag, (m[0][1]+m[1][0]) / denom, 0},
- {0, 0, (m[0][1]+m[1][0]) / denom}};
+ T denom = 32 * pow(p[0],1.5);
+ T offDiag = 1.0/(4*sqrt(p[0]));
- result[2] = { {-(m[0][2]+m[2][0]) / denom, 0, offDiag},
- {0, (m[0][2]+m[2][0]) / denom, 0},
- {offDiag, 0, (m[0][2]+m[2][0]) / denom}};
+ result[1] = { {-(m[0][1]+m[1][0]) / denom, offDiag, 0},
+ {offDiag, (m[0][1]+m[1][0]) / denom, 0},
+ {0, 0, (m[0][1]+m[1][0]) / denom}};
- result[3] = { {-(m[2][1]-m[1][2]) / denom, 0, 0},
- {0, (m[2][1]-m[1][2]) / denom, -offDiag},
- {0, offDiag, (m[2][1]-m[1][2]) / denom}};
- }
- else if (p[1] >= p[0] && p[1] >= p[2] && p[1] >= p[3])
- {
- result[1] = {{-1,0,0},{0,1,0},{0,0,-1}};
- result[1] *= 1.0/(8.0*sqrt(p[1]));
+ result[2] = { {-(m[0][2]+m[2][0]) / denom, 0, offDiag},
+ {0, (m[0][2]+m[2][0]) / denom, 0},
+ {offDiag, 0, (m[0][2]+m[2][0]) / denom}};
- T denom = 32 * pow(p[1],1.5);
- T offDiag = 1.0/(4*sqrt(p[1]));
+ result[3] = { {-(m[2][1]-m[1][2]) / denom, 0, 0},
+ {0, (m[2][1]-m[1][2]) / denom, -offDiag},
+ {0, offDiag, (m[2][1]-m[1][2]) / denom}};
+ }
+ else if (p[1] >= p[0] && p[1] >= p[2] && p[1] >= p[3])
+ {
+ result[1] = {{-1,0,0},{0,1,0},{0,0,-1}};
+ result[1] *= 1.0/(8.0*sqrt(p[1]));
- result[0] = { {(m[0][1]+m[1][0]) / denom, offDiag, 0},
- {offDiag, -(m[0][1]+m[1][0]) / denom, 0},
- {0, 0, (m[0][1]+m[1][0]) / denom}};
+ T denom = 32 * pow(p[1],1.5);
+ T offDiag = 1.0/(4*sqrt(p[1]));
- result[2] = { {(m[1][2]+m[2][1]) / denom, 0 , 0},
- {0, -(m[1][2]+m[2][1]) / denom, offDiag},
- {0, offDiag, (m[1][2]+m[2][1]) / denom}};
+ result[0] = { {(m[0][1]+m[1][0]) / denom, offDiag, 0},
+ {offDiag, -(m[0][1]+m[1][0]) / denom, 0},
+ {0, 0, (m[0][1]+m[1][0]) / denom}};
- result[3] = { {(m[0][2]-m[2][0]) / denom, 0, offDiag},
- {0, -(m[0][2]-m[2][0]) / denom, 0},
- {-offDiag, 0, (m[0][2]-m[2][0]) / denom}};
- }
- else if (p[2] >= p[0] && p[2] >= p[1] && p[2] >= p[3])
- {
- result[2] = {{-1,0,0},{0,-1,0},{0,0,1}};
- result[2] *= 1.0/(8.0*sqrt(p[2]));
+ result[2] = { {(m[1][2]+m[2][1]) / denom, 0 , 0},
+ {0, -(m[1][2]+m[2][1]) / denom, offDiag},
+ {0, offDiag, (m[1][2]+m[2][1]) / denom}};
- T denom = 32 * pow(p[2],1.5);
- T offDiag = 1.0/(4*sqrt(p[2]));
+ result[3] = { {(m[0][2]-m[2][0]) / denom, 0, offDiag},
+ {0, -(m[0][2]-m[2][0]) / denom, 0},
+ {-offDiag, 0, (m[0][2]-m[2][0]) / denom}};
+ }
+ else if (p[2] >= p[0] && p[2] >= p[1] && p[2] >= p[3])
+ {
+ result[2] = {{-1,0,0},{0,-1,0},{0,0,1}};
+ result[2] *= 1.0/(8.0*sqrt(p[2]));
- result[0] = { {(m[0][2]+m[2][0]) / denom, 0, offDiag},
- {0, (m[0][2]+m[2][0]) / denom, 0},
- {offDiag, 0, -(m[0][2]+m[2][0]) / denom}};
+ T denom = 32 * pow(p[2],1.5);
+ T offDiag = 1.0/(4*sqrt(p[2]));
- result[1] = { {(m[1][2]+m[2][1]) / denom, 0 , 0},
- {0, (m[1][2]+m[2][1]) / denom, offDiag},
- {0, offDiag, -(m[1][2]+m[2][1]) / denom}};
+ result[0] = { {(m[0][2]+m[2][0]) / denom, 0, offDiag},
+ {0, (m[0][2]+m[2][0]) / denom, 0},
+ {offDiag, 0, -(m[0][2]+m[2][0]) / denom}};
- result[3] = { {(m[1][0]-m[0][1]) / denom, -offDiag, 0},
- {offDiag, (m[1][0]-m[0][1]) / denom, 0},
- {0, 0, -(m[1][0]-m[0][1]) / denom}};
- }
- else
- {
- result[3] = {{1,0,0},{0,1,0},{0,0,1}};
- result[3] *= 1.0/(8.0*sqrt(p[3]));
+ result[1] = { {(m[1][2]+m[2][1]) / denom, 0 , 0},
+ {0, (m[1][2]+m[2][1]) / denom, offDiag},
+ {0, offDiag, -(m[1][2]+m[2][1]) / denom}};
- T denom = 32 * pow(p[3],1.5);
- T offDiag = 1.0/(4*sqrt(p[3]));
+ result[3] = { {(m[1][0]-m[0][1]) / denom, -offDiag, 0},
+ {offDiag, (m[1][0]-m[0][1]) / denom, 0},
+ {0, 0, -(m[1][0]-m[0][1]) / denom}};
+ }
+ else
+ {
+ result[3] = {{1,0,0},{0,1,0},{0,0,1}};
+ result[3] *= 1.0/(8.0*sqrt(p[3]));
- result[0] = { {-(m[2][1]-m[1][2]) / denom, 0, 0},
- {0, -(m[2][1]-m[1][2]) / denom, -offDiag},
- {0, offDiag, -(m[2][1]-m[1][2]) / denom}};
+ T denom = 32 * pow(p[3],1.5);
+ T offDiag = 1.0/(4*sqrt(p[3]));
- result[1] = { {-(m[0][2]-m[2][0]) / denom, 0, offDiag},
- {0, -(m[0][2]-m[2][0]) / denom, 0},
- {-offDiag, 0, -(m[0][2]-m[2][0]) / denom}};
+ result[0] = { {-(m[2][1]-m[1][2]) / denom, 0, 0},
+ {0, -(m[2][1]-m[1][2]) / denom, -offDiag},
+ {0, offDiag, -(m[2][1]-m[1][2]) / denom}};
- result[2] = { {-(m[1][0]-m[0][1]) / denom, -offDiag, 0},
- {offDiag, -(m[1][0]-m[0][1]) / denom, 0},
- {0, 0, -(m[1][0]-m[0][1]) / denom}};
- }
- return result;
- }
+ result[1] = { {-(m[0][2]-m[2][0]) / denom, 0, offDiag},
+ {0, -(m[0][2]-m[2][0]) / denom, 0},
+ {-offDiag, 0, -(m[0][2]-m[2][0]) / denom}};
- /** \brief Project tangent vector of R^n onto the tangent space */
- EmbeddedTangentVector projectOntoTangentSpace(const EmbeddedTangentVector& v) const {
- EmbeddedTangentVector result = v;
- EmbeddedTangentVector data = *this;
- result.axpy(-1*(data*result), data);
- return result;
+ result[2] = { {-(m[1][0]-m[0][1]) / denom, -offDiag, 0},
+ {offDiag, -(m[1][0]-m[0][1]) / denom, 0},
+ {0, 0, -(m[1][0]-m[0][1]) / denom}};
}
+ return result;
+ }
- /** \brief Project tangent vector of R^n onto the normal space space */
- EmbeddedTangentVector projectOntoNormalSpace(const EmbeddedTangentVector& v) const {
- Dune::FieldVector<T,4> data = *this;
- T sp = v*data;
- EmbeddedTangentVector result = *this;
- result *= sp;
- return result;
- }
+ /** \brief Project tangent vector of R^n onto the tangent space */
+ EmbeddedTangentVector projectOntoTangentSpace(const EmbeddedTangentVector& v) const {
+ EmbeddedTangentVector result = v;
+ EmbeddedTangentVector data = *this;
+ result.axpy(-1*(data*result), data);
+ return result;
+ }
- /** \brief The Weingarten map */
- EmbeddedTangentVector weingarten(const EmbeddedTangentVector& z, const EmbeddedTangentVector& v) const {
+ /** \brief Project tangent vector of R^n onto the normal space space */
+ EmbeddedTangentVector projectOntoNormalSpace(const EmbeddedTangentVector& v) const {
+ Dune::FieldVector<T,4> data = *this;
+ T sp = v*data;
+ EmbeddedTangentVector result = *this;
+ result *= sp;
+ return result;
+ }
- EmbeddedTangentVector result;
+ /** \brief The Weingarten map */
+ EmbeddedTangentVector weingarten(const EmbeddedTangentVector& z, const EmbeddedTangentVector& v) const {
- T sp = v*(*this);
+ EmbeddedTangentVector result;
- for (int i=0; i<embeddedDim; i++)
- result[i] = -sp * z[i];
+ T sp = v*(*this);
- return result;
- }
+ for (int i=0; i<embeddedDim; i++)
+ result[i] = -sp * z[i];
- /** \brief Project a vector in R^4 onto the unit quaternions
- *
- * \warning This is NOT the standard projection from R^{3 \times 3} onto SO(3)!
- */
- static Rotation<T,3> projectOnto(const CoordinateType& p)
- {
- Rotation<T,3> result(p);
- result /= result.two_norm();
- return result;
- }
+ return result;
+ }
- /** \brief Derivative of the projection of a vector in R^4 onto the unit quaternions
- *
- * \warning This is NOT the standard projection from R^{3 \times 3} onto SO(3)!
- */
- static auto derivativeOfProjection(const Dune::FieldVector<T,4>& p)
- {
- Dune::FieldMatrix<T,4,4> result;
- for (int i=0; i<4; i++)
- for (int j=0; j<4; j++)
- result[i][j] = ( (i==j) - p[i]*p[j] / p.two_norm2() ) / p.two_norm();
- return result;
- }
+ /** \brief Project a vector in R^4 onto the unit quaternions
+ *
+ * \warning This is NOT the standard projection from R^{3 \times 3} onto SO(3)!
+ */
+ static Rotation<T,3> projectOnto(const CoordinateType& p)
+ {
+ Rotation<T,3> result(p);
+ result /= result.two_norm();
+ return result;
+ }
- /** \brief The global coordinates, if you really want them */
- const CoordinateType& globalCoordinates() const {
- return *this;
- }
+ /** \brief Derivative of the projection of a vector in R^4 onto the unit quaternions
+ *
+ * \warning This is NOT the standard projection from R^{3 \times 3} onto SO(3)!
+ */
+ static auto derivativeOfProjection(const Dune::FieldVector<T,4>& p)
+ {
+ Dune::FieldMatrix<T,4,4> result;
+ for (int i=0; i<4; i++)
+ for (int j=0; j<4; j++)
+ result[i][j] = ( (i==j) - p[i]*p[j] / p.two_norm2() ) / p.two_norm();
+ return result;
+ }
- /** \brief Compute an orthonormal basis of the tangent space of the unit quaternions
- *
- * Since the unit quaternions are an odd-dimensional sphere, there exists a globally
- * continuous orthonormal frame field. I took the expression here from
- * "Dichmann, Li, Maddocks, 'Hamiltonian Formulations and Symmetries in Rod Mechanics', page 83"
- */
- Dune::FieldMatrix<T,3,4> orthonormalFrame() const {
- return {{ (*this)[3], (*this)[2], -(*this)[1], -(*this)[0]},
- {-(*this)[2], (*this)[3], (*this)[0], -(*this)[1]},
- { (*this)[1], -(*this)[0], (*this)[3], -(*this)[2]}};
+ /** \brief The global coordinates, if you really want them */
+ const CoordinateType& globalCoordinates() const {
+ return *this;
+ }
- }
+ /** \brief Compute an orthonormal basis of the tangent space of the unit quaternions
+ *
+ * Since the unit quaternions are an odd-dimensional sphere, there exists a globally
+ * continuous orthonormal frame field. I took the expression here from
+ * "Dichmann, Li, Maddocks, 'Hamiltonian Formulations and Symmetries in Rod Mechanics', page 83"
+ */
+ Dune::FieldMatrix<T,3,4> orthonormalFrame() const {
+ return {{ (*this)[3], (*this)[2], -(*this)[1], -(*this)[0]},
+ {-(*this)[2], (*this)[3], (*this)[0], -(*this)[1]},
+ { (*this)[1], -(*this)[0], (*this)[3], -(*this)[2]}};
+
+ }
};
diff --git a/dune/gfe/spaces/unitvector.hh b/dune/gfe/spaces/unitvector.hh
index d3d19dd3..9c6d3e07 100644
--- a/dune/gfe/spaces/unitvector.hh
+++ b/dune/gfe/spaces/unitvector.hh
@@ -16,538 +16,538 @@ class Rotation;
\tparam N Dimension of the embedding space
\tparam T The type used for individual coordinates
-*/
+ */
template <class T, int N>
class UnitVector
{
- // Rotation<T,3> is friend, because it needs the various derivatives of the arccos
- friend class Rotation<T,3>;
-
- /** \brief Computes sin(x) / x without getting unstable for small x */
- static T sinc(const T& x) {
- using std::sin;
- return (x < 1e-2) ? 1.0-x*x/6.0+ Dune::power(x,4)/120.0-Dune::power(x,6)/5040.0+Dune::power(x,8)/362880.0 : sin(x)/x;
- }
-
- /** \brief Compute arccos^2 without using the (at 1) nondifferentiable function acos x close to 1 */
- static T arcCosSquared(const T& x) {
- using std::acos;
- const T eps = 1e-2;
- if (x > 1-eps) { // acos is not differentiable, use the series expansion instead,
- // we need here lots of terms to be sure that the numerical derivatives are also within maschine precision
- //return -2 * (x-1) + 1.0/3 * (x-1)*(x-1) - 4.0/45 * (x-1)*(x-1)*(x-1);
- return 11665028.0/4729725.0
- -141088.0/45045.0*x
- + 413.0/429.0*x*x
- - 5344.0/12285.0*Dune::power(x,3)
- + 245.0/1287.0*Dune::power(x,4)
- - 1632.0/25025.0*Dune::power(x,5)
- + 56.0/3861.0*Dune::power(x,6)
- - 32.0/21021.0*Dune::power(x,7);
- } else {
- return Dune::power(acos(x),2);
- }
+ // Rotation<T,3> is friend, because it needs the various derivatives of the arccos
+ friend class Rotation<T,3>;
+
+ /** \brief Computes sin(x) / x without getting unstable for small x */
+ static T sinc(const T& x) {
+ using std::sin;
+ return (x < 1e-2) ? 1.0-x*x/6.0+ Dune::power(x,4)/120.0-Dune::power(x,6)/5040.0+Dune::power(x,8)/362880.0 : sin(x)/x;
+ }
+
+ /** \brief Compute arccos^2 without using the (at 1) nondifferentiable function acos x close to 1 */
+ static T arcCosSquared(const T& x) {
+ using std::acos;
+ const T eps = 1e-2;
+ if (x > 1-eps) { // acos is not differentiable, use the series expansion instead,
+ // we need here lots of terms to be sure that the numerical derivatives are also within maschine precision
+ //return -2 * (x-1) + 1.0/3 * (x-1)*(x-1) - 4.0/45 * (x-1)*(x-1)*(x-1);
+ return 11665028.0/4729725.0
+ -141088.0/45045.0*x
+ + 413.0/429.0*x*x
+ - 5344.0/12285.0*Dune::power(x,3)
+ + 245.0/1287.0*Dune::power(x,4)
+ - 1632.0/25025.0*Dune::power(x,5)
+ + 56.0/3861.0*Dune::power(x,6)
+ - 32.0/21021.0*Dune::power(x,7);
+ } else {
+ return Dune::power(acos(x),2);
}
-
- /** \brief Compute the derivative of arccos^2 without getting unstable for x close to 1 */
- static T derivativeOfArcCosSquared(const T& x) {
- using std::acos;
- using std::sqrt;
- const T eps = 1e-2;
- if (x > 1-eps) { // regular expression is unstable, use the series expansion instead
- // we need here lots of terms to be sure that the numerical derivatives are also within maschine precision
- //return -2 + 2*(x-1)/3 - 4/15*(x-1)*(x-1);
- return -47104.0/15015.0
- +12614.0/6435.0*x
- -63488.0/45045.0*x*x
- + 1204.0/1287.0*Dune::power(x,3)
- - 2048.0/4095.0*Dune::power(x,4)
- + 112.0/585.0*Dune::power(x,5)
- -2048.0/45045.0*Dune::power(x,6)
- + 32.0/6435.0*Dune::power(x,7);
-
- } else if (x < -1+eps) { // The function is not differentiable
- DUNE_THROW(Dune::Exception, "arccos^2 is not differentiable at x==-1!");
- } else
- return -2*acos(x) / sqrt(1-x*x);
+ }
+
+ /** \brief Compute the derivative of arccos^2 without getting unstable for x close to 1 */
+ static T derivativeOfArcCosSquared(const T& x) {
+ using std::acos;
+ using std::sqrt;
+ const T eps = 1e-2;
+ if (x > 1-eps) { // regular expression is unstable, use the series expansion instead
+ // we need here lots of terms to be sure that the numerical derivatives are also within maschine precision
+ //return -2 + 2*(x-1)/3 - 4/15*(x-1)*(x-1);
+ return -47104.0/15015.0
+ +12614.0/6435.0*x
+ -63488.0/45045.0*x*x
+ + 1204.0/1287.0*Dune::power(x,3)
+ - 2048.0/4095.0*Dune::power(x,4)
+ + 112.0/585.0*Dune::power(x,5)
+ -2048.0/45045.0*Dune::power(x,6)
+ + 32.0/6435.0*Dune::power(x,7);
+
+ } else if (x < -1+eps) { // The function is not differentiable
+ DUNE_THROW(Dune::Exception, "arccos^2 is not differentiable at x==-1!");
+ } else
+ return -2*acos(x) / sqrt(1-x*x);
+ }
+
+ /** \brief Compute the second derivative of arccos^2 without getting unstable for x close to 1 */
+ static T secondDerivativeOfArcCosSquared(const T& x) {
+ using std::acos;
+ using std::pow;
+ const T eps = 1e-2;
+ if (x > 1-eps) { // regular expression is unstable, use the series expansion instead
+ // we need here lots of terms to be sure that the numerical derivatives are also within maschine precision
+ //return 2.0/3 - 8*(x-1)/15;
+ return 1350030.0/676039.0+5632.0/2028117.0*Dune::power(x,10)
+ -1039056896.0/334639305.0*x
+ +150876.0/39767.0*x*x
+ -445186048.0/111546435.0*Dune::power(x,3)
+ + 343728.0/96577.0*Dune::power(x,4)
+ - 57769984.0/22309287.0*Dune::power(x,5)
+ + 710688.0/482885.0*Dune::power(x,6)
+ - 41615360.0/66927861.0*Dune::power(x,7)
+ + 616704.0/3380195.0*Dune::power(x,8)
+ - 245760.0/7436429.0*Dune::power(x,9);
+ } else if (x < -1+eps) { // The function is not differentiable
+ DUNE_THROW(Dune::Exception, "arccos^2 is not differentiable at x==-1!");
+ } else
+ return 2/(1-x*x) - 2*x*acos(x) / pow(1-x*x,1.5);
+ }
+
+ /** \brief Compute the third derivative of arccos^2 without getting unstable for x close to 1 */
+ static T thirdDerivativeOfArcCosSquared(const T& x) {
+ using std::acos;
+ using std::sqrt;
+ const T eps = 1e-2;
+ if (x > 1-eps) { // regular expression is unstable, use the series expansion instead
+ // we need here lots of terms to be sure that the numerical derivatives are also within maschine precision
+ //return -8.0/15 + 24*(x-1)/35;
+ return -1039056896.0/334639305.0
+ +301752.0/39767.0*x
+ -445186048.0/37182145.0*x*x
+ +1374912.0/96577.0*Dune::power(x,3)
+ -288849920.0/22309287.0*Dune::power(x,4)
+ +4264128.0/482885.0*Dune::power(x,5)
+ -41615360.0/9561123.0*Dune::power(x,6)
+ +4933632.0/3380195.0*Dune::power(x,7)
+ -2211840.0/7436429.0*Dune::power(x,8)
+ +56320.0/2028117.0*Dune::power(x,9);
+ } else if (x < -1+eps) { // The function is not differentiable
+
+ DUNE_THROW(Dune::Exception, "arccos^2 is not differentiable at x==-1!");
+ } else {
+ T d = 1-x*x;
+ return 6*x/(d*d) - 6*x*x*acos(x)/(d*d*sqrt(d)) - 2*acos(x)/(d*sqrt(d));
}
+ }
- /** \brief Compute the second derivative of arccos^2 without getting unstable for x close to 1 */
- static T secondDerivativeOfArcCosSquared(const T& x) {
- using std::acos;
- using std::pow;
- const T eps = 1e-2;
- if (x > 1-eps) { // regular expression is unstable, use the series expansion instead
- // we need here lots of terms to be sure that the numerical derivatives are also within maschine precision
- //return 2.0/3 - 8*(x-1)/15;
- return 1350030.0/676039.0+5632.0/2028117.0*Dune::power(x,10)
- -1039056896.0/334639305.0*x
- +150876.0/39767.0*x*x
- -445186048.0/111546435.0*Dune::power(x,3)
- + 343728.0/96577.0*Dune::power(x,4)
- - 57769984.0/22309287.0*Dune::power(x,5)
- + 710688.0/482885.0*Dune::power(x,6)
- - 41615360.0/66927861.0*Dune::power(x,7)
- + 616704.0/3380195.0*Dune::power(x,8)
- - 245760.0/7436429.0*Dune::power(x,9);
- } else if (x < -1+eps) { // The function is not differentiable
- DUNE_THROW(Dune::Exception, "arccos^2 is not differentiable at x==-1!");
- } else
- return 2/(1-x*x) - 2*x*acos(x) / pow(1-x*x,1.5);
- }
-
- /** \brief Compute the third derivative of arccos^2 without getting unstable for x close to 1 */
- static T thirdDerivativeOfArcCosSquared(const T& x) {
- using std::acos;
- using std::sqrt;
- const T eps = 1e-2;
- if (x > 1-eps) { // regular expression is unstable, use the series expansion instead
- // we need here lots of terms to be sure that the numerical derivatives are also within maschine precision
- //return -8.0/15 + 24*(x-1)/35;
- return -1039056896.0/334639305.0
- +301752.0/39767.0*x
- -445186048.0/37182145.0*x*x
- +1374912.0/96577.0*Dune::power(x,3)
- -288849920.0/22309287.0*Dune::power(x,4)
- +4264128.0/482885.0*Dune::power(x,5)
- -41615360.0/9561123.0*Dune::power(x,6)
- +4933632.0/3380195.0*Dune::power(x,7)
- -2211840.0/7436429.0*Dune::power(x,8)
- +56320.0/2028117.0*Dune::power(x,9);
- } else if (x < -1+eps) { // The function is not differentiable
-
- DUNE_THROW(Dune::Exception, "arccos^2 is not differentiable at x==-1!");
- } else {
- T d = 1-x*x;
- return 6*x/(d*d) - 6*x*x*acos(x)/(d*d*sqrt(d)) - 2*acos(x)/(d*sqrt(d));
- }
- }
-
- template <class T2, int N2>
- friend class UnitVector;
+ template <class T2, int N2>
+ friend class UnitVector;
public:
- /** \brief The type used for coordinates */
- typedef T ctype;
- typedef T field_type;
-
- /** \brief The type used for global coordinates */
- typedef Dune::FieldVector<T,N> CoordinateType;
+ /** \brief The type used for coordinates */
+ typedef T ctype;
+ typedef T field_type;
+
+ /** \brief The type used for global coordinates */
+ typedef Dune::FieldVector<T,N> CoordinateType;
+
+ /** \brief Dimension of the manifold formed by unit vectors */
+ static const int dim = N-1;
- /** \brief Dimension of the manifold formed by unit vectors */
- static const int dim = N-1;
+ /** \brief Dimension of the Euclidean space the manifold is embedded in */
+ static const int embeddedDim = N;
+
+ typedef Dune::FieldVector<T,N-1> TangentVector;
+
+ typedef Dune::FieldVector<T,N> EmbeddedTangentVector;
- /** \brief Dimension of the Euclidean space the manifold is embedded in */
- static const int embeddedDim = N;
+ /** \brief The global convexity radius of the unit sphere */
+ static constexpr double convexityRadius = 0.5*M_PI;
- typedef Dune::FieldVector<T,N-1> TangentVector;
+ /** \brief The return type of the derivativeOfProjection method */
+ typedef Dune::FieldMatrix<T, N, N> DerivativeOfProjection;
- typedef Dune::FieldVector<T,N> EmbeddedTangentVector;
+ /** \brief Default constructor */
+ UnitVector()
+ {}
- /** \brief The global convexity radius of the unit sphere */
- static constexpr double convexityRadius = 0.5*M_PI;
+ /** \brief Constructor from a vector. The vector gets normalized! */
+ UnitVector(const Dune::FieldVector<T,N>& vector)
+ : data_(vector)
+ {
+ data_ /= data_.two_norm();
+ }
- /** \brief The return type of the derivativeOfProjection method */
- typedef Dune::FieldMatrix<T, N, N> DerivativeOfProjection;
+ /** \brief Constructor from an array. The array gets normalized! */
+ UnitVector(const std::array<T,N>& vector)
+ {
+ for (int i=0; i<N; i++)
+ data_[i] = vector[i];
+ data_ /= data_.two_norm();
+ }
- /** \brief Default constructor */
- UnitVector()
- {}
+ /** \brief Assignment from UnitVector with different type -- used for automatic differentiation with ADOL-C */
+ template <class T2>
+ UnitVector& operator <<= (const UnitVector<T2,N>& other) {
+ for (int i=0; i<N; i++)
+ data_[i] <<= other.data_[i];
+ return *this;
+ }
- /** \brief Constructor from a vector. The vector gets normalized! */
- UnitVector(const Dune::FieldVector<T,N>& vector)
- : data_(vector)
- {
- data_ /= data_.two_norm();
- }
-
- /** \brief Constructor from an array. The array gets normalized! */
- UnitVector(const std::array<T,N>& vector)
- {
- for (int i=0; i<N; i++)
- data_[i] = vector[i];
- data_ /= data_.two_norm();
- }
+ /** \brief Rebind the UnitVector to another coordinate type */
+ template<class U>
+ struct rebind
+ {
+ typedef UnitVector<U,N> other;
+ };
- /** \brief Assignment from UnitVector with different type -- used for automatic differentiation with ADOL-C */
- template <class T2>
- UnitVector& operator <<= (const UnitVector<T2,N>& other) {
- for (int i=0; i<N; i++)
- data_[i] <<= other.data_[i];
- return *this;
- }
- /** \brief Rebind the UnitVector to another coordinate type */
- template<class U>
- struct rebind
- {
- typedef UnitVector<U,N> other;
- };
+ UnitVector<T,N>& operator=(const Dune::FieldVector<T,N>& vector)
+ {
+ data_ = vector;
+ data_ /= data_.two_norm();
+ return *this;
+ }
+ /** \brief The exponential map */
+ static UnitVector exp(const UnitVector& p, const TangentVector& v) {
- UnitVector<T,N>& operator=(const Dune::FieldVector<T,N>& vector)
- {
- data_ = vector;
- data_ /= data_.two_norm();
- return *this;
- }
+ Dune::FieldMatrix<T,N-1,N> frame = p.orthonormalFrame();
- /** \brief The exponential map */
- static UnitVector exp(const UnitVector& p, const TangentVector& v) {
+ EmbeddedTangentVector ev;
+ frame.mtv(v,ev);
- Dune::FieldMatrix<T,N-1,N> frame = p.orthonormalFrame();
+ return exp(p,ev);
+ }
- EmbeddedTangentVector ev;
- frame.mtv(v,ev);
+ /** \brief The exponential map */
+ static UnitVector exp(const UnitVector& p, const EmbeddedTangentVector& v) {
- return exp(p,ev);
- }
+ using std::abs;
+ using std::cos;
+ assert( abs(p.data_*v) < 1e-5 );
- /** \brief The exponential map */
- static UnitVector exp(const UnitVector& p, const EmbeddedTangentVector& v) {
-
- using std::abs;
- using std::cos;
- assert( abs(p.data_*v) < 1e-5 );
-
- const T norm = v.two_norm();
- UnitVector result = p;
- result.data_ *= cos(norm);
- result.data_.axpy(sinc(norm), v);
- return result;
- }
-
- /** \brief The inverse of the exponential map
- *
- * \results A vector in the tangent space of p
- */
- static EmbeddedTangentVector log(const UnitVector& p, const UnitVector& q)
- {
- EmbeddedTangentVector result = p.projectOntoTangentSpace(q.data_-p.data_);
- if (result.two_norm() > 1e-10)
- result *= distance(p,q) / result.two_norm();
- return result;
- }
+ const T norm = v.two_norm();
+ UnitVector result = p;
+ result.data_ *= cos(norm);
+ result.data_.axpy(sinc(norm), v);
+ return result;
+ }
- /** \brief Length of the great arc connecting the two points */
- static T distance(const UnitVector& a, const UnitVector& b) {
+ /** \brief The inverse of the exponential map
+ *
+ * \results A vector in the tangent space of p
+ */
+ static EmbeddedTangentVector log(const UnitVector& p, const UnitVector& q)
+ {
+ EmbeddedTangentVector result = p.projectOntoTangentSpace(q.data_-p.data_);
+ if (result.two_norm() > 1e-10)
+ result *= distance(p,q) / result.two_norm();
+ return result;
+ }
- using std::acos;
- using std::min;
+ /** \brief Length of the great arc connecting the two points */
+ static T distance(const UnitVector& a, const UnitVector& b) {
- // Not nice: we are in a class for unit vectors, but the class is actually
- // supposed to handle perturbations of unit vectors as well. Therefore
- // we normalize here.
- T x = a.data_ * b.data_/a.data_.two_norm()/b.data_.two_norm();
-
- // paranoia: if the argument is just eps larger than 1 acos returns NaN
- x = min(x,1.0);
-
- return acos(x);
- }
+ using std::acos;
+ using std::min;
+
+ // Not nice: we are in a class for unit vectors, but the class is actually
+ // supposed to handle perturbations of unit vectors as well. Therefore
+ // we normalize here.
+ T x = a.data_ * b.data_/a.data_.two_norm()/b.data_.two_norm();
+
+ // paranoia: if the argument is just eps larger than 1 acos returns NaN
+ x = min(x,1.0);
+
+ return acos(x);
+ }
#if ADOLC_ADOUBLE_H
- /** \brief Squared length of the great arc connecting the two points */
- static adouble distanceSquared(const UnitVector<double,N>& a, const UnitVector<adouble,N>& b)
- {
- // Not nice: we are in a class for unit vectors, but the class is actually
- // supposed to handle perturbations of unit vectors as well. Therefore
- // we normalize here.
- adouble x = a.data_ * b.data_ / (a.data_.two_norm()*b.data_.two_norm());
-
- // paranoia: if the argument is just eps larger than 1 acos returns NaN
- using std::min;
- x = min(x,1.0);
-
- // Special implementation that remains AD-differentiable near x==1
- return arcCosSquared(x);
- }
+ /** \brief Squared length of the great arc connecting the two points */
+ static adouble distanceSquared(const UnitVector<double,N>& a, const UnitVector<adouble,N>& b)
+ {
+ // Not nice: we are in a class for unit vectors, but the class is actually
+ // supposed to handle perturbations of unit vectors as well. Therefore
+ // we normalize here.
+ adouble x = a.data_ * b.data_ / (a.data_.two_norm()*b.data_.two_norm());
+
+ // paranoia: if the argument is just eps larger than 1 acos returns NaN
+ using std::min;
+ x = min(x,1.0);
+
+ // Special implementation that remains AD-differentiable near x==1
+ return arcCosSquared(x);
+ }
#endif
- /** \brief Compute the gradient of the squared distance function keeping the first argument fixed
+ /** \brief Compute the gradient of the squared distance function keeping the first argument fixed
- Unlike the distance itself the squared distance is differentiable at zero
- */
- static EmbeddedTangentVector derivativeOfDistanceSquaredWRTSecondArgument(const UnitVector& a, const UnitVector& b) {
- T x = a.data_ * b.data_;
+ Unlike the distance itself the squared distance is differentiable at zero
+ */
+ static EmbeddedTangentVector derivativeOfDistanceSquaredWRTSecondArgument(const UnitVector& a, const UnitVector& b) {
+ T x = a.data_ * b.data_;
- EmbeddedTangentVector result = a.data_;
+ EmbeddedTangentVector result = a.data_;
- result *= derivativeOfArcCosSquared(x);
+ result *= derivativeOfArcCosSquared(x);
- // Project gradient onto the tangent plane at b in order to obtain the surface gradient
- result = b.projectOntoTangentSpace(result);
+ // Project gradient onto the tangent plane at b in order to obtain the surface gradient
+ result = b.projectOntoTangentSpace(result);
- // Gradient must be a tangent vector at b, in other words, orthogonal to it
- using std::abs;
- assert(abs(b.data_ * result) < 1e-5);
+ // Gradient must be a tangent vector at b, in other words, orthogonal to it
+ using std::abs;
+ assert(abs(b.data_ * result) < 1e-5);
- return result;
- }
+ return result;
+ }
- /** \brief Compute the Hessian of the squared distance function keeping the first argument fixed
+ /** \brief Compute the Hessian of the squared distance function keeping the first argument fixed
- Unlike the distance itself the squared distance is differentiable at zero
- */
- static Dune::SymmetricMatrix<T,N> secondDerivativeOfDistanceSquaredWRTSecondArgument(const UnitVector& p, const UnitVector& q) {
+ Unlike the distance itself the squared distance is differentiable at zero
+ */
+ static Dune::SymmetricMatrix<T,N> secondDerivativeOfDistanceSquaredWRTSecondArgument(const UnitVector& p, const UnitVector& q) {
- T sp = p.data_ * q.data_;
+ T sp = p.data_ * q.data_;
- Dune::FieldVector<T,N> pProjected = q.projectOntoTangentSpace(p.globalCoordinates());
+ Dune::FieldVector<T,N> pProjected = q.projectOntoTangentSpace(p.globalCoordinates());
- Dune::SymmetricMatrix<T,N> A;
- for (int i=0; i<N; i++)
- for (int j=0; j<=i; j++)
- A(i,j) = pProjected[i]*pProjected[j];
+ Dune::SymmetricMatrix<T,N> A;
+ for (int i=0; i<N; i++)
+ for (int j=0; j<=i; j++)
+ A(i,j) = pProjected[i]*pProjected[j];
- A *= secondDerivativeOfArcCosSquared(sp);
+ A *= secondDerivativeOfArcCosSquared(sp);
- // Compute matrix B (see notes)
- Dune::SymmetricMatrix<T,N> Pq;
- for (int i=0; i<N; i++)
- for (int j=0; j<=i; j++)
- Pq(i,j) = (i==j) - q.data_[i]*q.data_[j];
+ // Compute matrix B (see notes)
+ Dune::SymmetricMatrix<T,N> Pq;
+ for (int i=0; i<N; i++)
+ for (int j=0; j<=i; j++)
+ Pq(i,j) = (i==j) - q.data_[i]*q.data_[j];
- // Bring it all together
- A.axpy(-1*derivativeOfArcCosSquared(sp)*sp, Pq);
+ // Bring it all together
+ A.axpy(-1*derivativeOfArcCosSquared(sp)*sp, Pq);
- return A;
- }
+ return A;
+ }
- /** \brief Compute the mixed second derivate \partial d^2 / \partial da db
+ /** \brief Compute the mixed second derivate \partial d^2 / \partial da db
- Unlike the distance itself the squared distance is differentiable at zero
- */
- static Dune::FieldMatrix<T,N,N> secondDerivativeOfDistanceSquaredWRTFirstAndSecondArgument(const UnitVector& a, const UnitVector& b) {
+ Unlike the distance itself the squared distance is differentiable at zero
+ */
+ static Dune::FieldMatrix<T,N,N> secondDerivativeOfDistanceSquaredWRTFirstAndSecondArgument(const UnitVector& a, const UnitVector& b) {
- T sp = a.data_ * b.data_;
+ T sp = a.data_ * b.data_;
- // Compute vector A (see notes)
- Dune::FieldMatrix<T,1,N> row;
- row[0] = b.projectOntoTangentSpace(a.globalCoordinates());
+ // Compute vector A (see notes)
+ Dune::FieldMatrix<T,1,N> row;
+ row[0] = b.projectOntoTangentSpace(a.globalCoordinates());
- Dune::FieldVector<T,N> tmp = a.projectOntoTangentSpace(b.globalCoordinates());
- Dune::FieldMatrix<T,N,1> column;
- for (int i=0; i<N; i++) // turn row vector into column vector
- column[i] = tmp[i];
+ Dune::FieldVector<T,N> tmp = a.projectOntoTangentSpace(b.globalCoordinates());
+ Dune::FieldMatrix<T,N,1> column;
+ for (int i=0; i<N; i++) // turn row vector into column vector
+ column[i] = tmp[i];
- Dune::FieldMatrix<T,N,N> A;
- // A = row * column
- Dune::FMatrixHelp::multMatrix(column,row,A);
- A *= secondDerivativeOfArcCosSquared(sp);
+ Dune::FieldMatrix<T,N,N> A;
+ // A = row * column
+ Dune::FMatrixHelp::multMatrix(column,row,A);
+ A *= secondDerivativeOfArcCosSquared(sp);
- // Compute matrix B (see notes)
- Dune::FieldMatrix<T,N,N> Pp, Pq;
- for (int i=0; i<N; i++)
- for (int j=0; j<N; j++) {
- Pp[i][j] = (i==j) - a.data_[i]*a.data_[j];
- Pq[i][j] = (i==j) - b.data_[i]*b.data_[j];
- }
+ // Compute matrix B (see notes)
+ Dune::FieldMatrix<T,N,N> Pp, Pq;
+ for (int i=0; i<N; i++)
+ for (int j=0; j<N; j++) {
+ Pp[i][j] = (i==j) - a.data_[i]*a.data_[j];
+ Pq[i][j] = (i==j) - b.data_[i]*b.data_[j];
+ }
- Dune::FieldMatrix<T,N,N> B;
- Dune::FMatrixHelp::multMatrix(Pp,Pq,B);
+ Dune::FieldMatrix<T,N,N> B;
+ Dune::FMatrixHelp::multMatrix(Pp,Pq,B);
- // Bring it all together
- A.axpy(derivativeOfArcCosSquared(sp), B);
+ // Bring it all together
+ A.axpy(derivativeOfArcCosSquared(sp), B);
- return A;
- }
+ return A;
+ }
- /** \brief Compute the third derivative \partial d^3 / \partial dq^3
+ /** \brief Compute the third derivative \partial d^3 / \partial dq^3
- Unlike the distance itself the squared distance is differentiable at zero
- */
- static Tensor3<T,N,N,N> thirdDerivativeOfDistanceSquaredWRTSecondArgument(const UnitVector& p, const UnitVector& q) {
+ Unlike the distance itself the squared distance is differentiable at zero
+ */
+ static Tensor3<T,N,N,N> thirdDerivativeOfDistanceSquaredWRTSecondArgument(const UnitVector& p, const UnitVector& q) {
- Tensor3<T,N,N,N> result;
+ Tensor3<T,N,N,N> result;
- T sp = p.data_ * q.data_;
+ T sp = p.data_ * q.data_;
- // The projection matrix onto the tangent space at p and q
- Dune::FieldMatrix<T,N,N> Pq;
- for (int i=0; i<N; i++)
- for (int j=0; j<N; j++)
- Pq[i][j] = (i==j) - q.globalCoordinates()[i]*q.globalCoordinates()[j];
+ // The projection matrix onto the tangent space at p and q
+ Dune::FieldMatrix<T,N,N> Pq;
+ for (int i=0; i<N; i++)
+ for (int j=0; j<N; j++)
+ Pq[i][j] = (i==j) - q.globalCoordinates()[i]*q.globalCoordinates()[j];
- Dune::FieldVector<T,N> pProjected = q.projectOntoTangentSpace(p.globalCoordinates());
+ Dune::FieldVector<T,N> pProjected = q.projectOntoTangentSpace(p.globalCoordinates());
- for (int i=0; i<N; i++)
- for (int j=0; j<N; j++)
- for (int k=0; k<N; k++) {
+ for (int i=0; i<N; i++)
+ for (int j=0; j<N; j++)
+ for (int k=0; k<N; k++) {
- result[i][j][k] = thirdDerivativeOfArcCosSquared(sp) * pProjected[i] * pProjected[j] * pProjected[k]
- - secondDerivativeOfArcCosSquared(sp) * ((i==j)*sp + p.globalCoordinates()[i]*q.globalCoordinates()[j])*pProjected[k]
- - secondDerivativeOfArcCosSquared(sp) * ((i==k)*sp + p.globalCoordinates()[i]*q.globalCoordinates()[k])*pProjected[j]
- - secondDerivativeOfArcCosSquared(sp) * pProjected[i] * Pq[j][k] * sp
- + derivativeOfArcCosSquared(sp) * ((i==j)*q.globalCoordinates()[k] + (i==k)*q.globalCoordinates()[j]) * sp
- - derivativeOfArcCosSquared(sp) * p.globalCoordinates()[i] * Pq[j][k];
- }
+ result[i][j][k] = thirdDerivativeOfArcCosSquared(sp) * pProjected[i] * pProjected[j] * pProjected[k]
+ - secondDerivativeOfArcCosSquared(sp) * ((i==j)*sp + p.globalCoordinates()[i]*q.globalCoordinates()[j])*pProjected[k]
+ - secondDerivativeOfArcCosSquared(sp) * ((i==k)*sp + p.globalCoordinates()[i]*q.globalCoordinates()[k])*pProjected[j]
+ - secondDerivativeOfArcCosSquared(sp) * pProjected[i] * Pq[j][k] * sp
+ + derivativeOfArcCosSquared(sp) * ((i==j)*q.globalCoordinates()[k] + (i==k)*q.globalCoordinates()[j]) * sp
+ - derivativeOfArcCosSquared(sp) * p.globalCoordinates()[i] * Pq[j][k];
+ }
- result = Pq * result;
+ result = Pq * result;
- return result;
- }
+ return result;
+ }
- /** \brief Compute the mixed third derivative \partial d^3 / \partial da db^2
+ /** \brief Compute the mixed third derivative \partial d^3 / \partial da db^2
- Unlike the distance itself the squared distance is differentiable at zero
- */
- static Tensor3<T,N,N,N> thirdDerivativeOfDistanceSquaredWRTFirst1AndSecond2Argument(const UnitVector& p, const UnitVector& q) {
+ Unlike the distance itself the squared distance is differentiable at zero
+ */
+ static Tensor3<T,N,N,N> thirdDerivativeOfDistanceSquaredWRTFirst1AndSecond2Argument(const UnitVector& p, const UnitVector& q) {
- Tensor3<T,N,N,N> result;
+ Tensor3<T,N,N,N> result;
- T sp = p.data_ * q.data_;
+ T sp = p.data_ * q.data_;
- // The projection matrix onto the tangent space at p and q
- Dune::FieldMatrix<T,N,N> Pp, Pq;
- for (int i=0; i<N; i++)
- for (int j=0; j<N; j++) {
- Pp[i][j] = (i==j) - p.globalCoordinates()[i]*p.globalCoordinates()[j];
- Pq[i][j] = (i==j) - q.globalCoordinates()[i]*q.globalCoordinates()[j];
- }
+ // The projection matrix onto the tangent space at p and q
+ Dune::FieldMatrix<T,N,N> Pp, Pq;
+ for (int i=0; i<N; i++)
+ for (int j=0; j<N; j++) {
+ Pp[i][j] = (i==j) - p.globalCoordinates()[i]*p.globalCoordinates()[j];
+ Pq[i][j] = (i==j) - q.globalCoordinates()[i]*q.globalCoordinates()[j];
+ }
- Dune::FieldVector<T,N> pProjected = q.projectOntoTangentSpace(p.globalCoordinates());
- Dune::FieldVector<T,N> qProjected = p.projectOntoTangentSpace(q.globalCoordinates());
+ Dune::FieldVector<T,N> pProjected = q.projectOntoTangentSpace(p.globalCoordinates());
+ Dune::FieldVector<T,N> qProjected = p.projectOntoTangentSpace(q.globalCoordinates());
- Tensor3<T,N,N,N> derivativeOfPqOTimesPq;
- for (int i=0; i<N; i++)
- for (int j=0; j<N; j++)
- for (int k=0; k<N; k++) {
- derivativeOfPqOTimesPq[i][j][k] = 0;
- for (int l=0; l<N; l++)
- derivativeOfPqOTimesPq[i][j][k] += Pp[i][l] * (Pq[j][l]*pProjected[k] + pProjected[j]*Pq[k][l]);
- }
+ Tensor3<T,N,N,N> derivativeOfPqOTimesPq;
+ for (int i=0; i<N; i++)
+ for (int j=0; j<N; j++)
+ for (int k=0; k<N; k++) {
+ derivativeOfPqOTimesPq[i][j][k] = 0;
+ for (int l=0; l<N; l++)
+ derivativeOfPqOTimesPq[i][j][k] += Pp[i][l] * (Pq[j][l]*pProjected[k] + pProjected[j]*Pq[k][l]);
+ }
- result = thirdDerivativeOfArcCosSquared(sp) * Tensor3<T,N,N,N>::product(qProjected,pProjected,pProjected)
- + secondDerivativeOfArcCosSquared(sp) * derivativeOfPqOTimesPq
- - secondDerivativeOfArcCosSquared(sp) * sp * Tensor3<T,N,N,N>::product(qProjected,Pq)
- - derivativeOfArcCosSquared(sp) * Tensor3<T,N,N,N>::product(qProjected,Pq);
+ result = thirdDerivativeOfArcCosSquared(sp) * Tensor3<T,N,N,N>::product(qProjected,pProjected,pProjected)
+ + secondDerivativeOfArcCosSquared(sp) * derivativeOfPqOTimesPq
+ - secondDerivativeOfArcCosSquared(sp) * sp * Tensor3<T,N,N,N>::product(qProjected,Pq)
+ - derivativeOfArcCosSquared(sp) * Tensor3<T,N,N,N>::product(qProjected,Pq);
- return result;
- }
+ return result;
+ }
- /** \brief Project tangent vector of R^n onto the tangent space */
- EmbeddedTangentVector projectOntoTangentSpace(const EmbeddedTangentVector& v) const {
- EmbeddedTangentVector result = v;
- result.axpy(-1*(data_*result), data_);
- return result;
- }
+ /** \brief Project tangent vector of R^n onto the tangent space */
+ EmbeddedTangentVector projectOntoTangentSpace(const EmbeddedTangentVector& v) const {
+ EmbeddedTangentVector result = v;
+ result.axpy(-1*(data_*result), data_);
+ return result;
+ }
- /** \brief Project tangent vector of R^n onto the normal space space */
- EmbeddedTangentVector projectOntoNormalSpace(const EmbeddedTangentVector& v) const {
+ /** \brief Project tangent vector of R^n onto the normal space space */
+ EmbeddedTangentVector projectOntoNormalSpace(const EmbeddedTangentVector& v) const {
- EmbeddedTangentVector result;
+ EmbeddedTangentVector result;
- T sp = 0;
- for (int i=0; i<N; i++)
- sp += v[i] * data_[i];
+ T sp = 0;
+ for (int i=0; i<N; i++)
+ sp += v[i] * data_[i];
- for (int i=0; i<N; i++)
- result[i] = sp * data_[i];
+ for (int i=0; i<N; i++)
+ result[i] = sp * data_[i];
- return result;
- }
+ return result;
+ }
- /** \brief The Weingarten map */
- EmbeddedTangentVector weingarten(const EmbeddedTangentVector& z, const EmbeddedTangentVector& v) const {
+ /** \brief The Weingarten map */
+ EmbeddedTangentVector weingarten(const EmbeddedTangentVector& z, const EmbeddedTangentVector& v) const {
- EmbeddedTangentVector result;
+ EmbeddedTangentVector result;
- T sp = 0;
- for (int i=0; i<N; i++)
- sp += v[i] * data_[i];
+ T sp = 0;
+ for (int i=0; i<N; i++)
+ sp += v[i] * data_[i];
- for (int i=0; i<N; i++)
- result[i] = -sp * z[i];
+ for (int i=0; i<N; i++)
+ result[i] = -sp * z[i];
- return result;
- }
+ return result;
+ }
- static UnitVector<T,N> projectOnto(const CoordinateType& p)
- {
- UnitVector<T,N> result(p);
- result.data_ /= result.data_.two_norm();
- return result;
- }
+ static UnitVector<T,N> projectOnto(const CoordinateType& p)
+ {
+ UnitVector<T,N> result(p);
+ result.data_ /= result.data_.two_norm();
+ return result;
+ }
- static DerivativeOfProjection derivativeOfProjection(const Dune::FieldVector<T,N>& p)
- {
- auto normSquared = p.two_norm2();
- auto norm = std::sqrt(normSquared);
+ static DerivativeOfProjection derivativeOfProjection(const Dune::FieldVector<T,N>& p)
+ {
+ auto normSquared = p.two_norm2();
+ auto norm = std::sqrt(normSquared);
- Dune::FieldMatrix<T,N,N> result;
- for (int i=0; i<N; i++)
- for (int j=0; j<N; j++)
- result[i][j] = ( (i==j) - p[i]*p[j] / normSquared ) / norm;
- return result;
- }
+ Dune::FieldMatrix<T,N,N> result;
+ for (int i=0; i<N; i++)
+ for (int j=0; j<N; j++)
+ result[i][j] = ( (i==j) - p[i]*p[j] / normSquared ) / norm;
+ return result;
+ }
- /** \brief The global coordinates, if you really want them */
- const CoordinateType& globalCoordinates() const {
- return data_;
- }
+ /** \brief The global coordinates, if you really want them */
+ const CoordinateType& globalCoordinates() const {
+ return data_;
+ }
- /** \brief Compute an orthonormal basis of the tangent space of S^n.
+ /** \brief Compute an orthonormal basis of the tangent space of S^n.
- This basis is of course not globally continuous.
- */
- Dune::FieldMatrix<T,N-1,N> orthonormalFrame() const {
+ This basis is of course not globally continuous.
+ */
+ Dune::FieldMatrix<T,N-1,N> orthonormalFrame() const {
- Dune::FieldMatrix<T,N-1,N> result;
+ Dune::FieldMatrix<T,N-1,N> result;
- // Coordinates of the stereographic projection
- Dune::FieldVector<T,N-1> X;
+ // Coordinates of the stereographic projection
+ Dune::FieldVector<T,N-1> X;
- if (data_[N-1] <= 0) {
+ if (data_[N-1] <= 0) {
- // Stereographic projection from the north pole onto R^{N-1}
- for (size_t i=0; i<N-1; i++)
- X[i] = data_[i] / (1-data_[N-1]);
+ // Stereographic projection from the north pole onto R^{N-1}
+ for (size_t i=0; i<N-1; i++)
+ X[i] = data_[i] / (1-data_[N-1]);
- } else {
+ } else {
- // Stereographic projection from the south pole onto R^{N-1}
- for (size_t i=0; i<N-1; i++)
- X[i] = data_[i] / (1+data_[N-1]);
+ // Stereographic projection from the south pole onto R^{N-1}
+ for (size_t i=0; i<N-1; i++)
+ X[i] = data_[i] / (1+data_[N-1]);
- }
+ }
- T RSquared = X.two_norm2();
+ T RSquared = X.two_norm2();
- for (size_t i=0; i<N-1; i++)
- for (size_t j=0; j<N-1; j++)
- // Note: the matrix is the transpose of the one in the paper
- result[j][i] = 2*(i==j)*(1+RSquared) - 4*X[i]*X[j];
+ for (size_t i=0; i<N-1; i++)
+ for (size_t j=0; j<N-1; j++)
+ // Note: the matrix is the transpose of the one in the paper
+ result[j][i] = 2*(i==j)*(1+RSquared) - 4*X[i]*X[j];
- for (size_t j=0; j<N-1; j++)
- result[j][N-1] = 4*X[j];
+ for (size_t j=0; j<N-1; j++)
+ result[j][N-1] = 4*X[j];
- // Upper hemisphere: adapt formulas so it is the stereographic projection from the south pole
- if (data_[N-1] > 0)
- for (size_t j=0; j<N-1; j++)
- result[j][N-1] *= -1;
+ // Upper hemisphere: adapt formulas so it is the stereographic projection from the south pole
+ if (data_[N-1] > 0)
+ for (size_t j=0; j<N-1; j++)
+ result[j][N-1] *= -1;
- // normalize the rows to make the orthogonal basis orthonormal
- for (size_t i=0; i<N-1; i++)
- result[i] /= result[i].two_norm();
+ // normalize the rows to make the orthogonal basis orthonormal
+ for (size_t i=0; i<N-1; i++)
+ result[i] /= result[i].two_norm();
- return result;
- }
+ return result;
+ }
- /** \brief Write unit vector object to output stream */
- friend std::ostream& operator<< (std::ostream& s, const UnitVector& unitVector)
- {
- return s << unitVector.data_;
- }
+ /** \brief Write unit vector object to output stream */
+ friend std::ostream& operator<< (std::ostream& s, const UnitVector& unitVector)
+ {
+ return s << unitVector.data_;
+ }
private:
- Dune::FieldVector<T,N> data_;
+ Dune::FieldVector<T,N> data_;
};
#endif
diff --git a/dune/gfe/svd.hh b/dune/gfe/svd.hh
index 763ab070..711093d2 100644
--- a/dune/gfe/svd.hh
+++ b/dune/gfe/svd.hh
@@ -1,6 +1,6 @@
/** \file
\brief Singular value decomposition code taken from 'Numerical Recipes in C'
-*/
+ */
#ifndef SVD_HH
#define SVD_HH
@@ -16,12 +16,12 @@
template <class T>
T pythag(T a, T b)
{
- T absa=std::fabs(a);
- T absb=std::fabs(b);
- if (absa > absb)
- return absa*std::sqrt(T(1.0)+(absb/absa)*(absb/absa));
- else
- return (absb == 0.0) ? T(0.0) : absb*sqrt(T(1.0)+(absa/absb)*(absa/absb));
+ T absa=std::fabs(a);
+ T absb=std::fabs(b);
+ if (absa > absb)
+ return absa*std::sqrt(T(1.0)+(absb/absa)*(absb/absa));
+ else
+ return (absb == 0.0) ? T(0.0) : absb*sqrt(T(1.0)+(absa/absb)*(absa/absb));
}
@@ -29,236 +29,236 @@ T pythag(T a, T b)
Given a matrix a[1..m][1..n], this routine computes its singular value decomposition, A =
U W V^T . The matrix U replaces a on output. The diagonal matrix of singular values W is out-
put as a vector w[1..n]. The matrix V (not the transpose V T ) is output as v[1..n][1..n].
-*/
+ */
template <class T, int m, int n>
void svdcmp(Dune::FieldMatrix<T,m,n>& a_, Dune::FieldVector<T,n>& w, Dune::FieldMatrix<T,n,n>& v_)
{
- Dune::FieldMatrix<T,m+1,n+1> a(0);
- Dune::FieldMatrix<T,n+1,n+1> v(0);
+ Dune::FieldMatrix<T,m+1,n+1> a(0);
+ Dune::FieldMatrix<T,n+1,n+1> v(0);
- for (int i=0; i<m; i++)
- for (int j=0; j<n; j++)
- a[i+1][j+1] = a_[i][j];
+ for (int i=0; i<m; i++)
+ for (int j=0; j<n; j++)
+ a[i+1][j+1] = a_[i][j];
- int flag,i,its,j,jj,k,l,nm;
- T anorm,c,f,g,h,s,scale,x,y,z;
- T rv1[n+1]; // 1 too large to accommodate fortran numbering
+ int flag,i,its,j,jj,k,l,nm;
+ T anorm,c,f,g,h,s,scale,x,y,z;
+ T rv1[n+1]; // 1 too large to accommodate fortran numbering
- //Householder reduction to bidiagonal form.
- g=scale=anorm=0.0;
+ //Householder reduction to bidiagonal form.
+ g=scale=anorm=0.0;
- for (i=1;i<=n;i++) {
+ for (i=1; i<=n; i++) {
- l=i+1;
- rv1[i]=scale*g;
- g=s=scale=0.0;
+ l=i+1;
+ rv1[i]=scale*g;
+ g=s=scale=0.0;
- if (i <= m) {
- for (k=i;k<=m;k++)
- scale += std::abs(a[k][i]);
- if (scale!=0) {
- for (k=i;k<=m;k++) {
- a[k][i] /= scale;
- s += a[k][i]*a[k][i];
- }
- f=a[i][i];
- g = -SIGN(std::sqrt(s),f);
- h=f*g-s;
- a[i][i]=f-g;
- for (j=l;j<=n;j++) {
- for (s=0.0,k=i;k<=m;k++)
- s += a[k][i]*a[k][j];
- f=s/h;
- for (k=i;k<=m;k++)
- a[k][j] += f*a[k][i];
- }
- for (k=i;k<=m;k++)
- a[k][i] *= scale;
- }
+ if (i <= m) {
+ for (k=i; k<=m; k++)
+ scale += std::abs(a[k][i]);
+ if (scale!=0) {
+ for (k=i; k<=m; k++) {
+ a[k][i] /= scale;
+ s += a[k][i]*a[k][i];
}
+ f=a[i][i];
+ g = -SIGN(std::sqrt(s),f);
+ h=f*g-s;
+ a[i][i]=f-g;
+ for (j=l; j<=n; j++) {
+ for (s=0.0,k=i; k<=m; k++)
+ s += a[k][i]*a[k][j];
+ f=s/h;
+ for (k=i; k<=m; k++)
+ a[k][j] += f*a[k][i];
+ }
+ for (k=i; k<=m; k++)
+ a[k][i] *= scale;
+ }
+ }
- w[i-1]=scale *g;
- g=s=scale=0.0;
+ w[i-1]=scale *g;
+ g=s=scale=0.0;
- if (i <= m && i != n) {
+ if (i <= m && i != n) {
- for (k=l;k<=n;k++) scale += fabs(a[i][k]);
- if (scale!=0) {
+ for (k=l; k<=n; k++) scale += fabs(a[i][k]);
+ if (scale!=0) {
- for (k=l;k<=n;k++) {
- a[i][k] /= scale;
- s += a[i][k]*a[i][k];
- }
- f=a[i][l];
- g = -SIGN(std::sqrt(s),f);
- h=f*g-s;
- a[i][l]=f-g;
- for (k=l;k<=n;k++) rv1[k]=a[i][k]/h;
- for (j=l;j<=m;j++) {
- for (s=0.0,k=l;k<=n;k++)
- s += a[j][k]*a[i][k];
- for (k=l;k<=n;k++)
- a[j][k] += s*rv1[k];
- }
- for (k=l;k<=n;k++)
- a[i][k] *= scale;
- }
+ for (k=l; k<=n; k++) {
+ a[i][k] /= scale;
+ s += a[i][k]*a[i][k];
}
+ f=a[i][l];
+ g = -SIGN(std::sqrt(s),f);
+ h=f*g-s;
+ a[i][l]=f-g;
+ for (k=l; k<=n; k++) rv1[k]=a[i][k]/h;
+ for (j=l; j<=m; j++) {
+ for (s=0.0,k=l; k<=n; k++)
+ s += a[j][k]*a[i][k];
+ for (k=l; k<=n; k++)
+ a[j][k] += s*rv1[k];
+ }
+ for (k=l; k<=n; k++)
+ a[i][k] *= scale;
+ }
+ }
- anorm = std::max(anorm,(std::abs(w[i-1])+std::abs(rv1[i])));
+ anorm = std::max(anorm,(std::abs(w[i-1])+std::abs(rv1[i])));
- }
+ }
- // Accumulation of right-hand transformations.
- for (i=n;i>=1;i--) {
- if (i < n) {
- if (g!=0) {
- // Double division to avoid possible underflow.
- for (j=l;j<=n;j++)
- v[j][i]=(a[i][j]/a[i][l])/g;
- for (j=l;j<=n;j++) {
- for (s=0.0,k=l;k<=n;k++) s += a[i][k]*v[k][j];
- for (k=l;k<=n;k++) v[k][j] += s*v[k][i];
- }
- }
- for (j=l;j<=n;j++) v[i][j]=v[j][i]=0.0;
+ // Accumulation of right-hand transformations.
+ for (i=n; i>=1; i--) {
+ if (i < n) {
+ if (g!=0) {
+ // Double division to avoid possible underflow.
+ for (j=l; j<=n; j++)
+ v[j][i]=(a[i][j]/a[i][l])/g;
+ for (j=l; j<=n; j++) {
+ for (s=0.0,k=l; k<=n; k++) s += a[i][k]*v[k][j];
+ for (k=l; k<=n; k++) v[k][j] += s*v[k][i];
}
- v[i][i]=1.0;
- g=rv1[i];
- l=i;
+ }
+ for (j=l; j<=n; j++) v[i][j]=v[j][i]=0.0;
}
+ v[i][i]=1.0;
+ g=rv1[i];
+ l=i;
+ }
- // Accumulation of left-hand transformations.
- //for (i=IMIN(m,n);i>=1;i--) {
- for (i=std::min(m,n);i>=1;i--) {
- l=i+1;
- g=w[i-1];
- for (j=l;j<=n;j++) a[i][j]=0.0;
- if (g!=0) {
- g=1.0/g;
- for (j=l;j<=n;j++) {
- for (s=0.0,k=l;k<=m;k++) s += a[k][i]*a[k][j];
- f=(s/a[i][i])*g;
- for (k=i;k<=m;k++) a[k][j] += f*a[k][i];
- }
- for (j=i;j<=m;j++) a[j][i] *= g;
- } else for (j=i;j<=m;j++) a[j][i]=0.0;
- ++a[i][i];
- }
+ // Accumulation of left-hand transformations.
+ //for (i=IMIN(m,n);i>=1;i--) {
+ for (i=std::min(m,n); i>=1; i--) {
+ l=i+1;
+ g=w[i-1];
+ for (j=l; j<=n; j++) a[i][j]=0.0;
+ if (g!=0) {
+ g=1.0/g;
+ for (j=l; j<=n; j++) {
+ for (s=0.0,k=l; k<=m; k++) s += a[k][i]*a[k][j];
+ f=(s/a[i][i])*g;
+ for (k=i; k<=m; k++) a[k][j] += f*a[k][i];
+ }
+ for (j=i; j<=m; j++) a[j][i] *= g;
+ } else for (j=i; j<=m; j++) a[j][i]=0.0;
+ ++a[i][i];
+ }
- // Diagonalization of the bidiagonal form: Loop over
- //singular values, and over allowed iterations.
- for (k=n;k>=1;k--) {
+ // Diagonalization of the bidiagonal form: Loop over
+ //singular values, and over allowed iterations.
+ for (k=n; k>=1; k--) {
- for (its=1;its<=30;its++) {
- flag=1;
- // Test for splitting.
- for (l=k;l>=1;l--) {
- // Note that rv1[1] is always zero.
- nm=l-1;
- if ((T)(fabs(rv1[l])+anorm) == anorm) {
- flag=0;
- break;
- }
- if ((T)(fabs(w[nm-1])+anorm) == anorm) break;
- }
- if (flag) {
- // Cancellation of rv1[l], if l > 1.
- c=0.0;
- s=1.0;
- for (i=l;i<=k;i++) {
+ for (its=1; its<=30; its++) {
+ flag=1;
+ // Test for splitting.
+ for (l=k; l>=1; l--) {
+ // Note that rv1[1] is always zero.
+ nm=l-1;
+ if ((T)(fabs(rv1[l])+anorm) == anorm) {
+ flag=0;
+ break;
+ }
+ if ((T)(fabs(w[nm-1])+anorm) == anorm) break;
+ }
+ if (flag) {
+ // Cancellation of rv1[l], if l > 1.
+ c=0.0;
+ s=1.0;
+ for (i=l; i<=k; i++) {
- f=s*rv1[i];
- rv1[i]=c*rv1[i];
- if ((T)(fabs(f)+anorm) == anorm) break;
- g=w[i-1];
- h=pythag(f,g);
- w[i-1]=h;
- h=1.0/h;
- c=g*h;
- s = -f*h;
- for (j=1;j<=m;j++) {
- y=a[j][nm];
- z=a[j][i];
- a[j][nm]=y*c+z*s;
- a[j][i]=z*c-y*s;
- }
- }
- }
- z=w[k-1];
- //Convergence.
- if (l == k) {
- // Singular value is made nonnegative.
- if (z < 0.0) {
- w[k-1] = -z;
- for (j=1;j<=n;j++) v[j][k] = -v[j][k];
- }
- break;
- }
- if (its == 30)
- std::cerr << "no convergence in 30 svdcmp iterations" << std::endl;
- // Shift from bottom 2-by-2 minor.
- x=w[l-1];
- nm=k-1;
- y=w[nm-1];
- g=rv1[nm];
- h=rv1[k];
- f=((y-z)*(y+z)+(g-h)*(g+h))/(2.0*h*y);
- g=pythag(f,T(1.0));
- f=((x-z)*(x+z)+h*((y/(f+SIGN(g,f)))-h))/x;
- // Next QR transformation:
- c=s=1.0;
- for (j=l;j<=nm;j++) {
- i=j+1;
- g=rv1[i];
- y=w[i-1];
- h=s*g;
- g=c*g;
- z=pythag(f,h);
- rv1[j]=z;
- c=f/z;
- s=h/z;
- f=x*c+g*s;
- g = g*c-x*s;
- h=y*s;
- y *= c;
- for (jj=1;jj<=n;jj++) {
- x=v[jj][j];
- z=v[jj][i];
- v[jj][j]=x*c+z*s;
- v[jj][i]=z*c-x*s;
- }
- z=pythag(f,h);
- // Rotation can be arbitrary if z = 0.
- w[j-1]=z;
- if (z!=0) {
- z=1.0/z;
- c=f*z;
- s=h*z;
- }
- f=c*g+s*y;
- x=c*y-s*g;
+ f=s*rv1[i];
+ rv1[i]=c*rv1[i];
+ if ((T)(fabs(f)+anorm) == anorm) break;
+ g=w[i-1];
+ h=pythag(f,g);
+ w[i-1]=h;
+ h=1.0/h;
+ c=g*h;
+ s = -f*h;
+ for (j=1; j<=m; j++) {
+ y=a[j][nm];
+ z=a[j][i];
+ a[j][nm]=y*c+z*s;
+ a[j][i]=z*c-y*s;
+ }
+ }
+ }
+ z=w[k-1];
+ //Convergence.
+ if (l == k) {
+ // Singular value is made nonnegative.
+ if (z < 0.0) {
+ w[k-1] = -z;
+ for (j=1; j<=n; j++) v[j][k] = -v[j][k];
+ }
+ break;
+ }
+ if (its == 30)
+ std::cerr << "no convergence in 30 svdcmp iterations" << std::endl;
+ // Shift from bottom 2-by-2 minor.
+ x=w[l-1];
+ nm=k-1;
+ y=w[nm-1];
+ g=rv1[nm];
+ h=rv1[k];
+ f=((y-z)*(y+z)+(g-h)*(g+h))/(2.0*h*y);
+ g=pythag(f,T(1.0));
+ f=((x-z)*(x+z)+h*((y/(f+SIGN(g,f)))-h))/x;
+ // Next QR transformation:
+ c=s=1.0;
+ for (j=l; j<=nm; j++) {
+ i=j+1;
+ g=rv1[i];
+ y=w[i-1];
+ h=s*g;
+ g=c*g;
+ z=pythag(f,h);
+ rv1[j]=z;
+ c=f/z;
+ s=h/z;
+ f=x*c+g*s;
+ g = g*c-x*s;
+ h=y*s;
+ y *= c;
+ for (jj=1; jj<=n; jj++) {
+ x=v[jj][j];
+ z=v[jj][i];
+ v[jj][j]=x*c+z*s;
+ v[jj][i]=z*c-x*s;
+ }
+ z=pythag(f,h);
+ // Rotation can be arbitrary if z = 0.
+ w[j-1]=z;
+ if (z!=0) {
+ z=1.0/z;
+ c=f*z;
+ s=h*z;
+ }
+ f=c*g+s*y;
+ x=c*y-s*g;
- for (jj=1;jj<=m;jj++) {
- y=a[jj][j];
- z=a[jj][i];
- a[jj][j]=y*c+z*s;
- a[jj][i]=z*c-y*s;
- }
- }
- rv1[l]=0.0;
- rv1[k]=f;
- w[k-1]=x;
+ for (jj=1; jj<=m; jj++) {
+ y=a[jj][j];
+ z=a[jj][i];
+ a[jj][j]=y*c+z*s;
+ a[jj][i]=z*c-y*s;
}
+ }
+ rv1[l]=0.0;
+ rv1[k]=f;
+ w[k-1]=x;
}
+ }
- for (int i=0; i<m; i++)
- for (int j=0; j<n; j++)
- a_[i][j] = a[i+1][j+1];
+ for (int i=0; i<m; i++)
+ for (int j=0; j<n; j++)
+ a_[i][j] = a[i+1][j+1];
- for (int i=0; i<n; i++)
- for (int j=0; j<n; j++)
- v_[i][j] = v[i+1][j+1];
+ for (int i=0; i<n; i++)
+ for (int j=0; j<n; j++)
+ v_[i][j] = v[i+1][j+1];
}
#endif
diff --git a/dune/gfe/symmetricmatrix.hh b/dune/gfe/symmetricmatrix.hh
index a7b48021..7bc860ec 100644
--- a/dune/gfe/symmetricmatrix.hh
+++ b/dune/gfe/symmetricmatrix.hh
@@ -6,21 +6,21 @@
namespace Dune {
-/** \brief A class implementing a symmetric matrix with compile-time size
- *
- * A \f$ dim\times dim \f$ matrix is stored internally as a <tt>Dune::FieldVector<double, dim*(dim+1)/2></tt>
- * The components are assumed to be \f$ [ E(1,1),\ E(2,1),\ E(2,2),\ E(3,1),\ E(3,2),\ E(3,3) ]\f$
- * and analogous for other dimensions
- * \tparam dim number of lines/columns of the matrix
- */
-template <class T, int N>
-class SymmetricMatrix
-{
-public:
-
- /** \brief The type used for scalars
+ /** \brief A class implementing a symmetric matrix with compile-time size
+ *
+ * A \f$ dim\times dim \f$ matrix is stored internally as a <tt>Dune::FieldVector<double, dim*(dim+1)/2></tt>
+ * The components are assumed to be \f$ [ E(1,1),\ E(2,1),\ E(2,2),\ E(3,1),\ E(3,2),\ E(3,3) ]\f$
+ * and analogous for other dimensions
+ * \tparam dim number of lines/columns of the matrix
*/
- typedef T field_type;
+ template <class T, int N>
+ class SymmetricMatrix
+ {
+ public:
+
+ /** \brief The type used for scalars
+ */
+ typedef T field_type;
/** \brief Default constructor, creates uninitialized matrix
*/
@@ -68,7 +68,7 @@ public:
T result = 0;
for (size_t i=0; i<N; i++)
for (size_t j=0; j<=i; j++)
- result += (1-0.5*(i==j)) * operator()(i,j) * (v1[i] * v2[j] + v1[j] * v2[i]);
+ result += (1-0.5*(i==j)) * operator()(i,j) * (v1[i] * v2[j] + v1[j] * v2[i]);
return result;
}
@@ -78,7 +78,7 @@ public:
data_.axpy(a,other.data_);
}
- /** \brief Return the FieldMatrix representation of the symmetric tensor.*/
+ /** \brief Return the FieldMatrix representation of the symmetric tensor.*/
Dune::FieldMatrix<T,N,N> matrix() const
{
Dune::FieldMatrix<T,N,N> mat;
@@ -89,9 +89,9 @@ public:
return mat;
}
-private:
+ private:
Dune::FieldVector<T,N*(N+1)/2> data_;
-};
+ };
}
#endif
diff --git a/dune/gfe/targetspacertrsolver.cc b/dune/gfe/targetspacertrsolver.cc
index 02e317c7..9d2bc556 100644
--- a/dune/gfe/targetspacertrsolver.cc
+++ b/dune/gfe/targetspacertrsolver.cc
@@ -15,91 +15,91 @@ setup(const AverageDistanceAssembler<TargetSpace>* assembler,
double tolerance,
int maxNewtonSteps)
{
- assembler_ = assembler;
- x_ = x;
- tolerance_ = tolerance;
- maxNewtonSteps_ = maxNewtonSteps;
- this->verbosity_ = NumProc::QUIET;
- minNumberOfIterations_ = 1;
+ assembler_ = assembler;
+ x_ = x;
+ tolerance_ = tolerance;
+ maxNewtonSteps_ = maxNewtonSteps;
+ this->verbosity_ = NumProc::QUIET;
+ minNumberOfIterations_ = 1;
}
template <class TargetSpace>
void TargetSpaceRiemannianTRSolver<TargetSpace>::solve()
{
- assert(minNumberOfIterations_ > 0);
-
- // /////////////////////////////////////////////////////
- // Newton Solver
- // /////////////////////////////////////////////////////
- for (size_t i=0; i<maxNewtonSteps_; i++) {
-
- if (this->verbosity_ == Solver::FULL) {
- std::cout << "----------------------------------------------------" << std::endl;
- std::cout << " Newton Step Number: " << i
- << ", energy: " << assembler_->value(x_) << std::endl;
- std::cout << "----------------------------------------------------" << std::endl;
- }
-
- CorrectionType corr;
-
- MatrixType hesseMatrix;
-
- typename TargetSpace::EmbeddedTangentVector rhs;
- assembler_->assembleEmbeddedGradient(x_, rhs);
- assembler_->assembleEmbeddedHessian(x_, hesseMatrix);
-
- // The right hand side is the _negative_ gradient
- rhs *= -1;
-
- // /////////////////////////////
- // Solve !
- // /////////////////////////////
- // TODO: The GramSchmidtSolver may not be the smartest choice here, because it needs
- // a matrix that is positive definite on the complement of its kernel. This can limit
- // the radius of convergence of the Newton solver. As an example consider interpolation
- // between two points on the unit sphere that are more than pi/2 apart. There is a
- // well-defined unique shortest geodesic between two such points, but depending on the
- // weights, the weighted sum of squared distances does not everywhere have a positive definite
- // second derivative.
- // Maybe the Newton solver has to be replaced by a trust-region or line-search solver
- // for such situations.
- Dune::FieldMatrix<field_type,blocksize,embeddedBlocksize> basis = x_.orthonormalFrame();
- GramSchmidtSolver<field_type, blocksize, embeddedBlocksize>::solve(hesseMatrix, corr, rhs, basis);
-
- if (this->verbosity_ == NumProc::FULL)
- std::cout << "Infinity norm of the correction: " << corr.infinity_norm() << std::endl;
-
- if (corr.infinity_norm() < this->tolerance_ and i>=minNumberOfIterations_-1) {
- if (this->verbosity_ == NumProc::FULL)
- std::cout << "CORRECTION IS SMALL ENOUGH" << std::endl;
-
- if (this->verbosity_ != NumProc::QUIET)
- std::cout << i+1 << " Newton steps were taken." << std::endl;
- break;
- }
-
- // ////////////////////////////////////////////////////
- // Check whether trust-region step can be accepted
- // ////////////////////////////////////////////////////
+ assert(minNumberOfIterations_ > 0);
+
+ // /////////////////////////////////////////////////////
+ // Newton Solver
+ // /////////////////////////////////////////////////////
+ for (size_t i=0; i<maxNewtonSteps_; i++) {
+
+ if (this->verbosity_ == Solver::FULL) {
+ std::cout << "----------------------------------------------------" << std::endl;
+ std::cout << " Newton Step Number: " << i
+ << ", energy: " << assembler_->value(x_) << std::endl;
+ std::cout << "----------------------------------------------------" << std::endl;
+ }
+
+ CorrectionType corr;
+
+ MatrixType hesseMatrix;
+
+ typename TargetSpace::EmbeddedTangentVector rhs;
+ assembler_->assembleEmbeddedGradient(x_, rhs);
+ assembler_->assembleEmbeddedHessian(x_, hesseMatrix);
+
+ // The right hand side is the _negative_ gradient
+ rhs *= -1;
+
+ // /////////////////////////////
+ // Solve !
+ // /////////////////////////////
+ // TODO: The GramSchmidtSolver may not be the smartest choice here, because it needs
+ // a matrix that is positive definite on the complement of its kernel. This can limit
+ // the radius of convergence of the Newton solver. As an example consider interpolation
+ // between two points on the unit sphere that are more than pi/2 apart. There is a
+ // well-defined unique shortest geodesic between two such points, but depending on the
+ // weights, the weighted sum of squared distances does not everywhere have a positive definite
+ // second derivative.
+ // Maybe the Newton solver has to be replaced by a trust-region or line-search solver
+ // for such situations.
+ Dune::FieldMatrix<field_type,blocksize,embeddedBlocksize> basis = x_.orthonormalFrame();
+ GramSchmidtSolver<field_type, blocksize, embeddedBlocksize>::solve(hesseMatrix, corr, rhs, basis);
+
+ if (this->verbosity_ == NumProc::FULL)
+ std::cout << "Infinity norm of the correction: " << corr.infinity_norm() << std::endl;
+
+ if (corr.infinity_norm() < this->tolerance_ and i>=minNumberOfIterations_-1) {
+ if (this->verbosity_ == NumProc::FULL)
+ std::cout << "CORRECTION IS SMALL ENOUGH" << std::endl;
+
+ if (this->verbosity_ != NumProc::QUIET)
+ std::cout << i+1 << " Newton steps were taken." << std::endl;
+ break;
+ }
+
+ // ////////////////////////////////////////////////////
+ // Check whether trust-region step can be accepted
+ // ////////////////////////////////////////////////////
#if 0
- TargetSpace newIterate = x_;
- newIterate = TargetSpace::exp(newIterate, corr);
+ TargetSpace newIterate = x_;
+ newIterate = TargetSpace::exp(newIterate, corr);
- if (this->verbosity_ == NumProc::FULL)
- {
- field_type oldEnergy = assembler_->value(x_);
- field_type energy = assembler_->value(newIterate);
+ if (this->verbosity_ == NumProc::FULL)
+ {
+ field_type oldEnergy = assembler_->value(x_);
+ field_type energy = assembler_->value(newIterate);
- if (energy >= oldEnergy)
- std::cout << "Direction is not a descent direction!" << std::endl;
- }
+ if (energy >= oldEnergy)
+ std::cout << "Direction is not a descent direction!" << std::endl;
+ }
- // Actually take the step
- x_ = newIterate;
+ // Actually take the step
+ x_ = newIterate;
#else
- x_ = TargetSpace::exp(x_, corr);
+ x_ = TargetSpace::exp(x_, corr);
#endif
- }
+ }
}
diff --git a/dune/gfe/targetspacertrsolver.hh b/dune/gfe/targetspacertrsolver.hh
index 568d8314..e07714ab 100644
--- a/dune/gfe/targetspacertrsolver.hh
+++ b/dune/gfe/targetspacertrsolver.hh
@@ -6,59 +6,59 @@
#include <dune/gfe/symmetricmatrix.hh>
/** \brief Riemannian trust-region solver for geodesic finite-element problems
- \tparam TargetSpace The manifold that our functions take values in
+ \tparam TargetSpace The manifold that our functions take values in
*/
template <class TargetSpace>
class TargetSpaceRiemannianTRSolver
- : public NumProc
+ : public NumProc
{
- const static int blocksize = TargetSpace::TangentVector::dimension;
- const static int embeddedBlocksize = TargetSpace::EmbeddedTangentVector::dimension;
+ const static int blocksize = TargetSpace::TangentVector::dimension;
+ const static int embeddedBlocksize = TargetSpace::EmbeddedTangentVector::dimension;
- // Centralize the field type here
- typedef typename TargetSpace::ctype field_type;
+ // Centralize the field type here
+ typedef typename TargetSpace::ctype field_type;
- typedef Dune::SymmetricMatrix<field_type, embeddedBlocksize> MatrixType;
- typedef Dune::FieldVector<field_type, embeddedBlocksize> CorrectionType;
+ typedef Dune::SymmetricMatrix<field_type, embeddedBlocksize> MatrixType;
+ typedef Dune::FieldVector<field_type, embeddedBlocksize> CorrectionType;
public:
- /** \brief Set up the solver using a monotone multigrid method as the inner solver */
- void setup(const AverageDistanceAssembler<TargetSpace>* assembler,
- const TargetSpace& x,
- double tolerance,
- int maxNewtonSteps);
+ /** \brief Set up the solver using a monotone multigrid method as the inner solver */
+ void setup(const AverageDistanceAssembler<TargetSpace>* assembler,
+ const TargetSpace& x,
+ double tolerance,
+ int maxNewtonSteps);
- void solve();
+ void solve();
- void setInitialSolution(const TargetSpace& x) {
- x_ = x;
- }
+ void setInitialSolution(const TargetSpace& x) {
+ x_ = x;
+ }
- TargetSpace getSol() const {return x_;}
+ TargetSpace getSol() const {return x_;}
protected:
- /** \brief The solution vector */
- TargetSpace x_;
+ /** \brief The solution vector */
+ TargetSpace x_;
- /** \brief Tolerance of the solver */
- double tolerance_;
+ /** \brief Tolerance of the solver */
+ double tolerance_;
- /** \brief Maximum number of Newton steps */
- size_t maxNewtonSteps_;
+ /** \brief Maximum number of Newton steps */
+ size_t maxNewtonSteps_;
- /** \brief The assembler for the average-distance functional */
- const AverageDistanceAssembler<TargetSpace>* assembler_;
+ /** \brief The assembler for the average-distance functional */
+ const AverageDistanceAssembler<TargetSpace>* assembler_;
- /** \brief Specify a minimal number of iterations the Newton solver has to do
- *
- * This is needed when working with automatic differentiation. While a very low
- * number of iterations may be enough to precisely compute the value of a
- * geodesic finite element function, a higher number may be needed to make an AD
- * system compute a derivative with sufficient precision.
- */
- size_t minNumberOfIterations_;
+ /** \brief Specify a minimal number of iterations the Newton solver has to do
+ *
+ * This is needed when working with automatic differentiation. While a very low
+ * number of iterations may be enough to precisely compute the value of a
+ * geodesic finite element function, a higher number may be needed to make an AD
+ * system compute a derivative with sufficient precision.
+ */
+ size_t minNumberOfIterations_;
};
diff --git a/dune/gfe/tensor3.hh b/dune/gfe/tensor3.hh
index 89cd648e..5324107d 100644
--- a/dune/gfe/tensor3.hh
+++ b/dune/gfe/tensor3.hh
@@ -3,182 +3,182 @@
/** \file
\brief A third-rank tensor
- */
+ */
#include <array>
#include <dune/common/fmatrix.hh>
/** \brief A third-rank tensor
-*/
+ */
template <class T, int N1, int N2, int N3>
class Tensor3
- : public std::array<Dune::FieldMatrix<T,N2,N3>,N1>
+ : public std::array<Dune::FieldMatrix<T,N2,N3>,N1>
{
- public:
+public:
- /** \brief Default constructor */
- Tensor3() {}
+ /** \brief Default constructor */
+ Tensor3() {}
- /** \brief Constructor from a scalar */
- Tensor3(const T& c)
- {
- for (int i=0; i<N1; i++)
- (*this)[i] = c;
- }
+ /** \brief Constructor from a scalar */
+ Tensor3(const T& c)
+ {
+ for (int i=0; i<N1; i++)
+ (*this)[i] = c;
+ }
+
+ T infinity_norm() const
+ {
+ static_assert(N1>0, "infinity_norm not implemented for empty tensors");
+ T norm = (*this)[0].infinity_norm();
+ for (int i=1; i<N1; i++)
+ norm = std::max(norm, (*this)[i].infinity_norm());
+ return norm;
+ }
+
+ T frobenius_norm() const
+ {
+ T norm = 0;
+ for (int i=0; i<N1; i++)
+ for (int j=0; j<N2; j++)
+ for (int k=0; k<N3; k++)
+ norm += (*this)[i][j][k] * (*this)[i][j][k];
- T infinity_norm() const
- {
- static_assert(N1>0, "infinity_norm not implemented for empty tensors");
- T norm = (*this)[0].infinity_norm();
- for (int i=1; i<N1; i++)
- norm = std::max(norm, (*this)[i].infinity_norm());
- return norm;
- }
+ return std::sqrt(norm);
+ }
- T frobenius_norm() const
- {
- T norm = 0;
- for (int i=0; i<N1; i++)
- for (int j=0; j<N2; j++)
- for (int k=0; k<N3; k++)
- norm += (*this)[i][j][k] * (*this)[i][j][k];
+ /** \brief The squared Frobenius norm, i.e., the sum of squared entries */
+ T frobenius_norm2() const
+ {
+ T norm = 0;
+ for (int i=0; i<N1; i++)
+ for (int j=0; j<N2; j++)
+ for (int k=0; k<N3; k++)
+ norm += (*this)[i][j][k] * (*this)[i][j][k];
- return std::sqrt(norm);
- }
+ return norm;
+ }
- /** \brief The squared Frobenius norm, i.e., the sum of squared entries */
- T frobenius_norm2() const
- {
- T norm = 0;
- for (int i=0; i<N1; i++)
- for (int j=0; j<N2; j++)
- for (int k=0; k<N3; k++)
- norm += (*this)[i][j][k] * (*this)[i][j][k];
+ Tensor3<T,N1,N2,N3>& axpy(const T& alpha, const Tensor3<T,N1,N2,N3>& other)
+ {
+ for (int i=0; i<N1; i++)
+ (*this)[i].axpy(alpha,other[i]);
+ return *this;
+ }
- return norm;
- }
+ static Tensor3<T,N1,N2,N3> product(const Dune::FieldVector<T,N1>& a, const Dune::FieldVector<T,N2>& b, const Dune::FieldVector<T,N3>& c)
+ {
+ Tensor3<T,N1,N2,N3> result;
- Tensor3<T,N1,N2,N3>& axpy(const T& alpha, const Tensor3<T,N1,N2,N3>& other)
- {
- for (int i=0; i<N1; i++)
- (*this)[i].axpy(alpha,other[i]);
- return *this;
- }
+ for (int i=0; i<N1; i++)
+ for (int j=0; j<N2; j++)
+ for (int k=0; k<N3; k++)
+ result[i][j][k] = a[i]*b[j]*c[k];
- static Tensor3<T,N1,N2,N3> product(const Dune::FieldVector<T,N1>& a, const Dune::FieldVector<T,N2>& b, const Dune::FieldVector<T,N3>& c)
- {
- Tensor3<T,N1,N2,N3> result;
+ return result;
+ }
- for (int i=0; i<N1; i++)
- for (int j=0; j<N2; j++)
- for (int k=0; k<N3; k++)
- result[i][j][k] = a[i]*b[j]*c[k];
+ static Tensor3<T,N1,N2,N3> product(const Dune::FieldMatrix<T,N1,N2>& ab, const Dune::FieldVector<T,N3>& c)
+ {
+ Tensor3<T,N1,N2,N3> result;
- return result;
- }
+ for (int i=0; i<N1; i++)
+ for (int j=0; j<N2; j++)
+ for (int k=0; k<N3; k++)
+ result[i][j][k] = ab[i][j]*c[k];
- static Tensor3<T,N1,N2,N3> product(const Dune::FieldMatrix<T,N1,N2>& ab, const Dune::FieldVector<T,N3>& c)
- {
- Tensor3<T,N1,N2,N3> result;
+ return result;
+ }
- for (int i=0; i<N1; i++)
- for (int j=0; j<N2; j++)
- for (int k=0; k<N3; k++)
- result[i][j][k] = ab[i][j]*c[k];
+ static Tensor3<T,N1,N2,N3> product(const Dune::FieldVector<T,N1>& a, const Dune::FieldMatrix<T,N2,N3>& bc)
+ {
+ Tensor3<T,N1,N2,N3> result;
- return result;
- }
+ for (int i=0; i<N1; i++)
+ for (int j=0; j<N2; j++)
+ for (int k=0; k<N3; k++)
+ result[i][j][k] = a[i]*bc[j][k];
- static Tensor3<T,N1,N2,N3> product(const Dune::FieldVector<T,N1>& a, const Dune::FieldMatrix<T,N2,N3>& bc)
- {
- Tensor3<T,N1,N2,N3> result;
+ return result;
+ }
- for (int i=0; i<N1; i++)
- for (int j=0; j<N2; j++)
- for (int k=0; k<N3; k++)
- result[i][j][k] = a[i]*bc[j][k];
+ template <int N4>
+ friend Tensor3<T,N1,N2,N4> operator*(const Tensor3<T,N1,N2,N3>& a, const Dune::FieldMatrix<T,N3,N4>& b)
+ {
+ Tensor3<T,N1,N2,N4> result;
- return result;
+ for (int i=0; i<N1; i++)
+ for (int j=0; j<N2; j++)
+ for (int k=0; k<N4; k++) {
+ result[i][j][k] = 0;
+ for (int l=0; l<N3; l++)
+ result[i][j][k] += a[i][j][l]*b[l][k];
}
- template <int N4>
- friend Tensor3<T,N1,N2,N4> operator*(const Tensor3<T,N1,N2,N3>& a, const Dune::FieldMatrix<T,N3,N4>& b)
- {
- Tensor3<T,N1,N2,N4> result;
+ return result;
+ }
- for (int i=0; i<N1; i++)
- for (int j=0; j<N2; j++)
- for (int k=0; k<N4; k++) {
- result[i][j][k] = 0;
- for (int l=0; l<N3; l++)
- result[i][j][k] += a[i][j][l]*b[l][k];
- }
+ template <int N4>
+ friend Tensor3<T,N1,N3,N4> operator*(const Dune::FieldMatrix<T,N1,N2>& a, const Tensor3<T,N2,N3,N4>& b)
+ {
+ Tensor3<T,N1,N3,N4> result;
- return result;
+ for (int i=0; i<N1; i++)
+ for (int j=0; j<N3; j++)
+ for (int k=0; k<N4; k++) {
+ result[i][j][k] = 0;
+ for (int l=0; l<N2; l++)
+ result[i][j][k] += a[i][l]*b[l][j][k];
}
- template <int N4>
- friend Tensor3<T,N1,N3,N4> operator*(const Dune::FieldMatrix<T,N1,N2>& a, const Tensor3<T,N2,N3,N4>& b)
- {
- Tensor3<T,N1,N3,N4> result;
-
- for (int i=0; i<N1; i++)
- for (int j=0; j<N3; j++)
- for (int k=0; k<N4; k++) {
- result[i][j][k] = 0;
- for (int l=0; l<N2; l++)
- result[i][j][k] += a[i][l]*b[l][j][k];
- }
-
- return result;
- }
+ return result;
+ }
- friend Tensor3<T,N1,N2,N3> operator+(const Tensor3<T,N1,N2,N3>& a, const Tensor3<T,N1,N2,N3>& b)
- {
- Tensor3<T,N1,N2,N3> result;
+ friend Tensor3<T,N1,N2,N3> operator+(const Tensor3<T,N1,N2,N3>& a, const Tensor3<T,N1,N2,N3>& b)
+ {
+ Tensor3<T,N1,N2,N3> result;
- for (int i=0; i<N1; i++)
- for (int j=0; j<N2; j++)
- for (int k=0; k<N3; k++)
- result[i][j][k] = a[i][j][k] + b[i][j][k];
+ for (int i=0; i<N1; i++)
+ for (int j=0; j<N2; j++)
+ for (int k=0; k<N3; k++)
+ result[i][j][k] = a[i][j][k] + b[i][j][k];
- return result;
- }
+ return result;
+ }
- friend Tensor3<T,N1,N2,N3> operator-(const Tensor3<T,N1,N2,N3>& a, const Tensor3<T,N1,N2,N3>& b)
- {
- Tensor3<T,N1,N2,N3> result;
+ friend Tensor3<T,N1,N2,N3> operator-(const Tensor3<T,N1,N2,N3>& a, const Tensor3<T,N1,N2,N3>& b)
+ {
+ Tensor3<T,N1,N2,N3> result;
- for (int i=0; i<N1; i++)
- for (int j=0; j<N2; j++)
- for (int k=0; k<N3; k++)
- result[i][j][k] = a[i][j][k] - b[i][j][k];
+ for (int i=0; i<N1; i++)
+ for (int j=0; j<N2; j++)
+ for (int k=0; k<N3; k++)
+ result[i][j][k] = a[i][j][k] - b[i][j][k];
- return result;
- }
+ return result;
+ }
- friend Tensor3<T,N1,N2,N3> operator*(const T& scalar, const Tensor3<T,N1,N2,N3>& tensor)
- {
- Tensor3<T,N1,N2,N3> result;
+ friend Tensor3<T,N1,N2,N3> operator*(const T& scalar, const Tensor3<T,N1,N2,N3>& tensor)
+ {
+ Tensor3<T,N1,N2,N3> result;
- for (int i=0; i<N1; i++)
- for (int j=0; j<N2; j++)
- for (int k=0; k<N3; k++)
- result[i][j][k] = scalar * tensor[i][j][k];
+ for (int i=0; i<N1; i++)
+ for (int j=0; j<N2; j++)
+ for (int k=0; k<N3; k++)
+ result[i][j][k] = scalar * tensor[i][j][k];
- return result;
+ return result;
- }
+ }
- Tensor3<T,N1,N2,N3>& operator*=(const T& scalar)
- {
- for (int i=0; i<N1; i++)
- for (int j=0; j<N2; j++)
- for (int k=0; k<N3; k++)
- (*this)[i][j][k] *= scalar;
+ Tensor3<T,N1,N2,N3>& operator*=(const T& scalar)
+ {
+ for (int i=0; i<N1; i++)
+ for (int j=0; j<N2; j++)
+ for (int k=0; k<N3; k++)
+ (*this)[i][j][k] *= scalar;
- return *this;
- }
+ return *this;
+ }
};
@@ -186,9 +186,9 @@ class Tensor3
template <class T, int N1, int N2, int N3>
inline std::ostream& operator<< (std::ostream& s, const Tensor3<T,N1,N2,N3>& tensor)
{
- for (int i=0; i<N1; i++)
- s << tensor[i];
- return s;
+ for (int i=0; i<N1; i++)
+ s << tensor[i];
+ return s;
}
diff --git a/dune/gfe/tensorssd.hh b/dune/gfe/tensorssd.hh
index 4d1a256a..0a9be67c 100644
--- a/dune/gfe/tensorssd.hh
+++ b/dune/gfe/tensorssd.hh
@@ -3,7 +3,7 @@
/** \file
\brief A third-rank tensor with two static (SS) and one dynamic (D) dimension
- */
+ */
#include <array>
@@ -11,120 +11,120 @@
#include <dune/istl/matrix.hh>
/** \brief A third-rank tensor with two static (SS) and one dynamic (D) dimension
- *
+ *
* \tparam T Type of the entries
* \tparam N1 Size of the first dimension
* \tparam N2 Size of the second dimension
-*/
+ */
template <class T, int N1, int N2>
class TensorSSD
{
public:
- /** \brief Constructor with the third dimension */
- explicit TensorSSD(size_t N3)
+ /** \brief Constructor with the third dimension */
+ explicit TensorSSD(size_t N3)
: N3_(N3)
- {
- for (int i=0; i<N1; i++)
- for (int j=0; j<N2; j++)
- data_[i][j].resize(N3_);
+ {
+ for (int i=0; i<N1; i++)
+ for (int j=0; j<N2; j++)
+ data_[i][j].resize(N3_);
+ }
+
+ size_t dim(int index) const
+ {
+ switch (index) {
+ case 0 :
+ return N1;
+ case 1 :
+ return N2;
+ case 2 :
+ return N3_;
+ default :
+ assert(false);
}
-
- size_t dim(int index) const
- {
- switch (index) {
- case 0:
- return N1;
- case 1:
- return N2;
- case 2:
- return N3_;
- default:
- assert(false);
+ // Make compiler happy even if NDEBUG is set
+ return 0;
+ }
+
+ /** \brief Direct access to individual entries */
+ T& operator()(size_t i, size_t j, size_t k)
+ {
+ assert(i<N1 && j<N2 && k<N3_);
+ return data_[i][j][k];
+ }
+
+ /** \brief Direct const access to individual entries */
+ const T& operator()(size_t i, size_t j, size_t k) const
+ {
+ assert(i<N1 && j<N2 && k<N3_);
+ return data_[i][j][k];
+ }
+
+ /** \brief Assignment from scalar */
+ TensorSSD<T,N1,N2>& operator=(const T& scalar)
+ {
+ for (int i=0; i<N1; i++)
+ for (int j=0; j<N2; j++)
+ for (size_t k=0; k<dim(2); k++)
+ data_[i][j][k] = scalar;
+
+ return *this;
+ }
+
+ friend TensorSSD<T,N1,N2> operator*(const TensorSSD<T,N1,N2>& a, const Dune::Matrix<T>& b)
+ {
+ TensorSSD<T,N1,N2> result(b.M());
+
+ assert(a.dim(2)==b.N());
+ size_t N4 = a.dim(2); // third dimension of a
+
+ for (int i=0; i<N1; i++)
+ for (int j=0; j<N2; j++)
+ for (size_t k=0; k<b.M(); k++) {
+ result.data_[i][j][k] = 0;
+ for (size_t l=0; l<N4; l++)
+ result.data_[i][j][k] += a.data_[i][j][l]*b[l][k];
}
- // Make compiler happy even if NDEBUG is set
- return 0;
- }
- /** \brief Direct access to individual entries */
- T& operator()(size_t i, size_t j, size_t k)
- {
- assert(i<N1 && j<N2 && k<N3_);
- return data_[i][j][k];
- }
-
- /** \brief Direct const access to individual entries */
- const T& operator()(size_t i, size_t j, size_t k) const
- {
- assert(i<N1 && j<N2 && k<N3_);
- return data_[i][j][k];
- }
-
- /** \brief Assignment from scalar */
- TensorSSD<T,N1,N2>& operator=(const T& scalar)
- {
- for (int i=0; i<N1; i++)
- for (int j=0; j<N2; j++)
- for (size_t k=0; k<dim(2); k++)
- data_[i][j][k] = scalar;
-
- return *this;
- }
+ return result;
+ }
- friend TensorSSD<T,N1,N2> operator*(const TensorSSD<T,N1,N2>& a, const Dune::Matrix<T>& b)
- {
- TensorSSD<T,N1,N2> result(b.M());
-
- assert(a.dim(2)==b.N());
- size_t N4 = a.dim(2); // third dimension of a
-
- for (int i=0; i<N1; i++)
- for (int j=0; j<N2; j++)
- for (size_t k=0; k<b.M(); k++) {
- result.data_[i][j][k] = 0;
- for (size_t l=0; l<N4; l++)
- result.data_[i][j][k] += a.data_[i][j][l]*b[l][k];
- }
-
- return result;
- }
+ friend TensorSSD<T,N1,N2> operator+(const TensorSSD<T,N1,N2>& a, const TensorSSD<T,N1,N2>& b)
+ {
+ assert(a.dim(2)==b.dim(2));
+ size_t N3 = a.dim(2);
+ TensorSSD<T,N1,N2> result(N3);
+
+ for (int i=0; i<N1; i++)
+ for (int j=0; j<N2; j++)
+ for (size_t k=0; k<N3; k++)
+ result.data_[i][j][k] = a.data_[i][j][k] + b.data_[i][j][k];
+
+ return result;
+ }
- friend TensorSSD<T,N1,N2> operator+(const TensorSSD<T,N1,N2>& a, const TensorSSD<T,N1,N2>& b)
- {
- assert(a.dim(2)==b.dim(2));
- size_t N3 = a.dim(2);
- TensorSSD<T,N1,N2> result(N3);
-
- for (int i=0; i<N1; i++)
- for (int j=0; j<N2; j++)
- for (size_t k=0; k<N3; k++)
- result.data_[i][j][k] = a.data_[i][j][k] + b.data_[i][j][k];
-
- return result;
- }
-
private:
- // having the dynamic data type on the inside is kind of a stupid data layout
- std::array<std::array<std::vector<T>, N2>, N1> data_;
-
- // size of the third dimension
- size_t N3_;
+ // having the dynamic data type on the inside is kind of a stupid data layout
+ std::array<std::array<std::vector<T>, N2>, N1> data_;
+
+ // size of the third dimension
+ size_t N3_;
};
//! Output operator for TensorSSD
template <class T, int N1, int N2>
inline std::ostream& operator<< (std::ostream& s, const TensorSSD<T,N1,N2>& tensor)
{
- for (int i=0; i<N1; i++) {
- for (int j=0; j<N2; j++) {
- for (size_t k=0; k<tensor.dim(2); k++)
- s << tensor(i,j,k) << " ";
- s << std::endl;
- }
- s << std::endl;
+ for (int i=0; i<N1; i++) {
+ for (int j=0; j<N2; j++) {
+ for (size_t k=0; k<tensor.dim(2); k++)
+ s << tensor(i,j,k) << " ";
+ s << std::endl;
}
- return s;
+ s << std::endl;
+ }
+ return s;
}
diff --git a/dune/gfe/trustregionmmgbasesolver.hh b/dune/gfe/trustregionmmgbasesolver.hh
index 416087a8..9001e709 100644
--- a/dune/gfe/trustregionmmgbasesolver.hh
+++ b/dune/gfe/trustregionmmgbasesolver.hh
@@ -10,71 +10,71 @@
#include <dune/solvers/solvers/quadraticipopt.hh>
/** \brief Base solver for a monotone multigrid solver when used as the inner solver in a trust region method
- *
- * Monotone multigrid methods solve constrained problems even on the coarsest level. Therefore, the choice
- * of possible coarse grid solvers is limited. I have tried both Gauss-Seidel and IPOpt, and both of them
- * have not satisfied my. Gauss-Seidel is slow when the coarse grid is not coarse enough. The results computed
- * by IPOpt appear to be imprecise, and I didn't get good trust-region convergence. I don't really understand
- * this -- it may be a bug in our IPOpt wrapper code.
- * Ideally, one would use a direct solver, in particular close to the solution. However, a direct solver may
- * not produce admissible corrections. Also, it may produce energy increase. Therefore, the TrustRegionMMGBaseSolver
- * does a pragmatic approach: a solution is first computed using UMFPack, disregarding the obstacles.
- * If the result is admissible and decreases the energy we keep it. Otherwise we fall back to IPOpt.
- */
+ *
+ * Monotone multigrid methods solve constrained problems even on the coarsest level. Therefore, the choice
+ * of possible coarse grid solvers is limited. I have tried both Gauss-Seidel and IPOpt, and both of them
+ * have not satisfied my. Gauss-Seidel is slow when the coarse grid is not coarse enough. The results computed
+ * by IPOpt appear to be imprecise, and I didn't get good trust-region convergence. I don't really understand
+ * this -- it may be a bug in our IPOpt wrapper code.
+ * Ideally, one would use a direct solver, in particular close to the solution. However, a direct solver may
+ * not produce admissible corrections. Also, it may produce energy increase. Therefore, the TrustRegionMMGBaseSolver
+ * does a pragmatic approach: a solution is first computed using UMFPack, disregarding the obstacles.
+ * If the result is admissible and decreases the energy we keep it. Otherwise we fall back to IPOpt.
+ */
template <class MatrixType, class VectorType>
class TrustRegionMMGBaseSolver
-: public IterativeSolver<VectorType>,
- public CanIgnore<Dune::BitSetVector<VectorType::block_type::dimension> >
+ : public IterativeSolver<VectorType>,
+ public CanIgnore<Dune::BitSetVector<VectorType::block_type::dimension> >
{
- typedef typename VectorType::field_type field_type;
+ typedef typename VectorType::field_type field_type;
- // For complex-valued data
- typedef typename Dune::FieldTraits<field_type>::real_type real_type;
+ // For complex-valued data
+ typedef typename Dune::FieldTraits<field_type>::real_type real_type;
- constexpr static int blocksize = VectorType::value_type::dimension;
- typedef Dune::BitSetVector<blocksize> BitVectorType;
+ constexpr static int blocksize = VectorType::value_type::dimension;
+ typedef Dune::BitSetVector<blocksize> BitVectorType;
public:
- /** \brief Constructor taking all relevant data */
- TrustRegionMMGBaseSolver(Solver::VerbosityMode verbosity)
- : IterativeSolver<VectorType, BitVectorType>(100, // maxIterations
- 1e-8, // tolerance
- nullptr,
- verbosity,
- false) // false = use absolute error
- {}
-
- void setProblem(const MatrixType& matrix,
- VectorType& x,
- const VectorType& rhs) {
- matrix_ = &matrix;
- x_ = &x;
- rhs_ = &rhs;
- }
+ /** \brief Constructor taking all relevant data */
+ TrustRegionMMGBaseSolver(Solver::VerbosityMode verbosity)
+ : IterativeSolver<VectorType, BitVectorType>(100, // maxIterations
+ 1e-8, // tolerance
+ nullptr,
+ verbosity,
+ false) // false = use absolute error
+ {}
+
+ void setProblem(const MatrixType& matrix,
+ VectorType& x,
+ const VectorType& rhs) {
+ matrix_ = &matrix;
+ x_ = &x;
+ rhs_ = &rhs;
+ }
- /** \brief Checks whether all relevant member variables are set
- * \exception SolverError if the iteration step is not set up properly
- */
- virtual void check() const;
+ /** \brief Checks whether all relevant member variables are set
+ * \exception SolverError if the iteration step is not set up properly
+ */
+ virtual void check() const;
- virtual void preprocess();
+ virtual void preprocess();
- /** \brief Loop, call the iteration procedure
- * and monitor convergence
- */
- virtual void solve();
+ /** \brief Loop, call the iteration procedure
+ * and monitor convergence
+ */
+ virtual void solve();
- //! The quadratic term in the quadratic energy, is assumed to be symmetric
- const MatrixType* matrix_;
+ //! The quadratic term in the quadratic energy, is assumed to be symmetric
+ const MatrixType* matrix_;
- //! Vector to store the solution
- VectorType* x_;
+ //! Vector to store the solution
+ VectorType* x_;
- //! The linear term in the quadratic energy
- const VectorType* rhs_;
+ //! The linear term in the quadratic energy
+ const VectorType* rhs_;
- std::vector<BoxConstraint<field_type,blocksize> >* obstacles_;
+ std::vector<BoxConstraint<field_type,blocksize> >* obstacles_;
};
@@ -82,14 +82,14 @@ public:
template <class MatrixType, class VectorType>
void TrustRegionMMGBaseSolver<MatrixType, VectorType>::check() const
{
- // check base class
- IterativeSolver<VectorType,BitVectorType>::check();
+ // check base class
+ IterativeSolver<VectorType,BitVectorType>::check();
}
template <class MatrixType, class VectorType>
void TrustRegionMMGBaseSolver<MatrixType, VectorType>::preprocess()
{
- //this->iterationStep_->preprocess();
+ //this->iterationStep_->preprocess();
}
template <class MatrixType, class VectorType>
diff --git a/dune/gfe/vtkfile.hh b/dune/gfe/vtkfile.hh
index 168c5ca3..3bfcd1f3 100644
--- a/dune/gfe/vtkfile.hh
+++ b/dune/gfe/vtkfile.hh
@@ -72,7 +72,7 @@ namespace Dune {
writer.endPoints();
for (int i=0; i<mpiHelper.size(); i++)
- writer.addPiece(getParallelPieceName(filename, "", i, mpiHelper.size()));
+ writer.addPiece(getParallelPieceName(filename, "", i, mpiHelper.size()));
// finish main section
writer.endMain();
@@ -201,7 +201,7 @@ namespace Dune {
pieceElement->QueryIntAttribute( "NumberOfCells", &numberOfCells );
}
else // No vtu file? So let's try vtp
- if ((pieceElement = doc.FirstChildElement( "VTKFile" )->FirstChildElement( "PolyData" )->FirstChildElement( "Piece" )) )
+ if ((pieceElement = doc.FirstChildElement( "VTKFile" )->FirstChildElement( "PolyData" )->FirstChildElement( "Piece" )) )
{
pieceElement->QueryIntAttribute( "NumberOfPolys", &numberOfCells );
}
diff --git a/src/compute-disc-error.cc b/src/compute-disc-error.cc
index ae1a3300..f5b5b277 100644
--- a/src/compute-disc-error.cc
+++ b/src/compute-disc-error.cc
@@ -39,50 +39,50 @@ using namespace Dune;
/** \brief Check whether given local coordinates are contained in the reference element
\todo This method exists in the Dune grid interface! But we need the eps.
-*/
+ */
static bool checkInside(const Dune::GeometryType& type,
const Dune::FieldVector<double, dim> &loc,
double eps)
{
switch (type.dim())
{
- case 0: // vertex
- return false;
-
- case 1: // line
- return -eps <= loc[0] && loc[0] <= 1+eps;
-
- case 2:
-
- if (type.isSimplex()) {
- return -eps <= loc[0] && -eps <= loc[1] && (loc[0]+loc[1])<=1+eps;
- } else if (type.isCube()) {
- return -eps <= loc[0] && loc[0] <= 1+eps
- && -eps <= loc[1] && loc[1] <= 1+eps;
- } else
- DUNE_THROW(Dune::GridError, "checkInside(): ERROR: Unknown type " << type << " found!");
-
- case 3:
- if (type.isSimplex()) {
- return -eps <= loc[0] && -eps <= loc[1] && -eps <= loc[2]
- && (loc[0]+loc[1]+loc[2]) <= 1+eps;
- } else if (type.isPyramid()) {
- return -eps <= loc[0] && -eps <= loc[1] && -eps <= loc[2]
- && (loc[0]+loc[2]) <= 1+eps
- && (loc[1]+loc[2]) <= 1+eps;
- } else if (type.isPrism()) {
- return -eps <= loc[0] && -eps <= loc[1]
- && (loc[0]+loc[1])<= 1+eps
- && -eps <= loc[2] && loc[2] <= 1+eps;
- } else if (type.isCube()) {
- return -eps <= loc[0] && loc[0] <= 1+eps
- && -eps <= loc[1] && loc[1] <= 1+eps
- && -eps <= loc[2] && loc[2] <= 1+eps;
- }else
- DUNE_THROW(Dune::GridError, "checkInside(): ERROR: Unknown type " << type << " found!");
-
- default:
+ case 0 : // vertex
+ return false;
+
+ case 1 : // line
+ return -eps <= loc[0] && loc[0] <= 1+eps;
+
+ case 2 :
+
+ if (type.isSimplex()) {
+ return -eps <= loc[0] && -eps <= loc[1] && (loc[0]+loc[1])<=1+eps;
+ } else if (type.isCube()) {
+ return -eps <= loc[0] && loc[0] <= 1+eps
+ && -eps <= loc[1] && loc[1] <= 1+eps;
+ } else
DUNE_THROW(Dune::GridError, "checkInside(): ERROR: Unknown type " << type << " found!");
+
+ case 3 :
+ if (type.isSimplex()) {
+ return -eps <= loc[0] && -eps <= loc[1] && -eps <= loc[2]
+ && (loc[0]+loc[1]+loc[2]) <= 1+eps;
+ } else if (type.isPyramid()) {
+ return -eps <= loc[0] && -eps <= loc[1] && -eps <= loc[2]
+ && (loc[0]+loc[2]) <= 1+eps
+ && (loc[1]+loc[2]) <= 1+eps;
+ } else if (type.isPrism()) {
+ return -eps <= loc[0] && -eps <= loc[1]
+ && (loc[0]+loc[1])<= 1+eps
+ && -eps <= loc[2] && loc[2] <= 1+eps;
+ } else if (type.isCube()) {
+ return -eps <= loc[0] && loc[0] <= 1+eps
+ && -eps <= loc[1] && loc[1] <= 1+eps
+ && -eps <= loc[2] && loc[2] <= 1+eps;
+ }else
+ DUNE_THROW(Dune::GridError, "checkInside(): ERROR: Unknown type " << type << " found!");
+
+ default :
+ DUNE_THROW(Dune::GridError, "checkInside(): ERROR: Unknown type " << type << " found!");
}
}
@@ -379,47 +379,47 @@ void measureDiscreteEOC(const GridView gridView,
}
else
{
- double l2ErrorSquared = 0;
- double h1ErrorSquared = 0;
+ double l2ErrorSquared = 0;
+ double h1ErrorSquared = 0;
- for (const auto& rElement : elements(referenceGridView))
- {
- localReferenceSolution.bind(rElement);
- auto localReferenceDerivative = derivative(localReferenceSolution);
+ for (const auto& rElement : elements(referenceGridView))
+ {
+ localReferenceSolution.bind(rElement);
+ auto localReferenceDerivative = derivative(localReferenceSolution);
- const auto& quadRule = QuadratureRules<double, dim>::rule(rElement.type(), 6);
+ const auto& quadRule = QuadratureRules<double, dim>::rule(rElement.type(), 6);
- for (const auto& qp : quadRule)
- {
- auto integrationElement = rElement.geometry().integrationElement(qp.position());
+ for (const auto& qp : quadRule)
+ {
+ auto integrationElement = rElement.geometry().integrationElement(qp.position());
- // Given a point with local coordinates qp.position() on element rElement of the reference grid
- // find the element and local coordinates on the grid of the numerical simulation
- auto supportingElement = findSupportingElement(referenceGridView.grid(),
- gridView.grid(),
- rElement, qp.position());
- auto element = std::get<0>(supportingElement);
- localNumericalSolution.bind(element);
- auto localNumericalDerivative = derivative(localNumericalSolution);
- auto localPos = std::get<1>(supportingElement);
+ // Given a point with local coordinates qp.position() on element rElement of the reference grid
+ // find the element and local coordinates on the grid of the numerical simulation
+ auto supportingElement = findSupportingElement(referenceGridView.grid(),
+ gridView.grid(),
+ rElement, qp.position());
+ auto element = std::get<0>(supportingElement);
+ localNumericalSolution.bind(element);
+ auto localNumericalDerivative = derivative(localNumericalSolution);
+ auto localPos = std::get<1>(supportingElement);
- auto diff = localReferenceSolution(qp.position()) - localNumericalSolution(localPos);
+ auto diff = localReferenceSolution(qp.position()) - localNumericalSolution(localPos);
- l2ErrorSquared += integrationElement * qp.weight() * diff.two_norm2();
+ l2ErrorSquared += integrationElement * qp.weight() * diff.two_norm2();
- auto derDiff = localReferenceDerivative(qp.position()) - localNumericalDerivative(localPos);
+ auto derDiff = localReferenceDerivative(qp.position()) - localNumericalDerivative(localPos);
- h1ErrorSquared += integrationElement * qp.weight() * derDiff.frobenius_norm2();
+ h1ErrorSquared += integrationElement * qp.weight() * derDiff.frobenius_norm2();
+ }
}
- }
- std::cout << "levels: " << gridView.grid().maxLevel()+1
- << " "
- << "L^2 error: " << std::sqrt(l2ErrorSquared)
- << " "
- << "h^1 error: " << std::sqrt(h1ErrorSquared)
- << std::endl;
+ std::cout << "levels: " << gridView.grid().maxLevel()+1
+ << " "
+ << "L^2 error: " << std::sqrt(l2ErrorSquared)
+ << " "
+ << "h^1 error: " << std::sqrt(h1ErrorSquared)
+ << std::endl;
}
}
@@ -473,33 +473,33 @@ void measureAnalyticalEOC(const GridView gridView,
// TODO: We need to use a type-erasure wrapper here
// Only used if // parameterSet["interpolationMethod"] == "geodesic"
auto numericalSolutionGeodesic = GFE::EmbeddedGlobalGFEFunction<FEBasis,
- LocalGeodesicFEFunction<dim, double, typename FEBasis::LocalView::Tree::FiniteElement, TargetSpace>,
- TargetSpace> (feBasis, x);
+ LocalGeodesicFEFunction<dim, double, typename FEBasis::LocalView::Tree::FiniteElement, TargetSpace>,
+ TargetSpace> (feBasis, x);
auto localNumericalSolutionGeodesic = localFunction(numericalSolutionGeodesic);
// ONly used if parameterSet["interpolationMethod"] == "projected"
auto numericalSolutionProjected = GFE::EmbeddedGlobalGFEFunction<FEBasis,
- GFE::LocalProjectedFEFunction<dim, double, typename FEBasis::LocalView::Tree::FiniteElement, TargetSpace>,
- TargetSpace> (feBasis, x);
+ GFE::LocalProjectedFEFunction<dim, double, typename FEBasis::LocalView::Tree::FiniteElement, TargetSpace>,
+ TargetSpace> (feBasis, x);
auto localNumericalSolutionProjected = localFunction(numericalSolutionProjected);
#else
typedef VirtualDifferentiableFunction<FieldVector<double, dimworld>, typename TargetSpace::CoordinateType> FBase;
Python::Module module = Python::import(parameterSet.get<std::string>("referenceSolution"));
- auto referenceSolution = module.get("fdf").toC<std::shared_ptr<FBase>>();
+ auto referenceSolution = module.get("fdf").toC<std::shared_ptr<FBase> >();
// The numerical solution, as a grid function
std::unique_ptr<VirtualGridViewFunction<GridView, typename TargetSpace::CoordinateType> > numericalSolution;
if (parameterSet["interpolationMethod"] == "geodesic")
numericalSolution = std::make_unique<GFE::EmbeddedGlobalGFEFunction<FEBasis,
- LocalGeodesicFEFunction<dim, double, typename FEBasis::LocalView::Tree::FiniteElement, TargetSpace>,
- TargetSpace> > (feBasis, x);
+ LocalGeodesicFEFunction<dim, double, typename FEBasis::LocalView::Tree::FiniteElement, TargetSpace>,
+ TargetSpace> > (feBasis, x);
if (parameterSet["interpolationMethod"] == "projected")
numericalSolution = std::make_unique<GFE::EmbeddedGlobalGFEFunction<FEBasis,
- GFE::LocalProjectedFEFunction<dim, double, typename FEBasis::LocalView::Tree::FiniteElement, TargetSpace>,
- TargetSpace> > (feBasis, x);
+ GFE::LocalProjectedFEFunction<dim, double, typename FEBasis::LocalView::Tree::FiniteElement, TargetSpace>,
+ TargetSpace> > (feBasis, x);
#endif
// QuadratureRule for the integral of the L^2 error
@@ -539,9 +539,9 @@ void measureAnalyticalEOC(const GridView gridView,
#if DUNE_VERSION_GT(DUNE_FUFEM, 2, 9)
FieldVector<double,blocksize> numValue;
if (parameterSet["interpolationMethod"] == "geodesic")
- numValue = localNumericalSolutionGeodesic(quadPos);
+ numValue = localNumericalSolutionGeodesic(quadPos);
if (parameterSet["interpolationMethod"] == "projected")
- numValue = localNumericalSolutionProjected(quadPos);
+ numValue = localNumericalSolutionProjected(quadPos);
auto refValue = referenceSolution(element.geometry().global(quadPos));
#else
@@ -550,11 +550,11 @@ void measureAnalyticalEOC(const GridView gridView,
// Evaluate function b. If it is a grid function use that to speed up the evaluation
FieldVector<double,blocksize> refValue;
- if (std::dynamic_pointer_cast<const VirtualGridViewFunction<GridView,FieldVector<double,blocksize> >>(referenceSolution))
- std::dynamic_pointer_cast<const VirtualGridViewFunction<GridView,FieldVector<double,blocksize> >>(referenceSolution)->evaluateLocal(element,
- quadPos,
- refValue
- );
+ if (std::dynamic_pointer_cast<const VirtualGridViewFunction<GridView,FieldVector<double,blocksize> > >(referenceSolution))
+ std::dynamic_pointer_cast<const VirtualGridViewFunction<GridView,FieldVector<double,blocksize> > >(referenceSolution)->evaluateLocal(element,
+ quadPos,
+ refValue
+ );
else
referenceSolution->evaluate(element.geometry().global(quadPos), refValue);
#endif
@@ -573,9 +573,9 @@ void measureAnalyticalEOC(const GridView gridView,
FieldMatrix<double,blocksize,dimworld> num_di;
if (parameterSet["interpolationMethod"] == "geodesic")
- num_di = localNumericalDerivativeGeodesic(quadPos);
+ num_di = localNumericalDerivativeGeodesic(quadPos);
if (parameterSet["interpolationMethod"] == "projected")
- num_di = localNumericalDerivativeProjected(quadPos);
+ num_di = localNumericalDerivativeProjected(quadPos);
auto ref_di = referenceDerivative(element.geometry().global(quadPos));
#else
@@ -585,15 +585,15 @@ void measureAnalyticalEOC(const GridView gridView,
if (dynamic_cast<const VirtualGridViewFunction<GridView,FieldVector<double,blocksize> >*>(numericalSolution.get()))
dynamic_cast<const VirtualGridViewFunction<GridView,FieldVector<double,blocksize> >*>(numericalSolution.get())->evaluateDerivativeLocal(element,
- quadPos,
- num_di);
+ quadPos,
+ num_di);
else
numericalSolution->evaluateDerivative(element.geometry().global(quadPos), num_di);
- if (std::dynamic_pointer_cast<const VirtualGridViewFunction<GridView,FieldVector<double,blocksize> >>(referenceSolution))
- std::dynamic_pointer_cast<const VirtualGridViewFunction<GridView,FieldVector<double,blocksize> >>(referenceSolution)->evaluateDerivativeLocal(element,
- quadPos,
- ref_di);
+ if (std::dynamic_pointer_cast<const VirtualGridViewFunction<GridView,FieldVector<double,blocksize> > >(referenceSolution))
+ std::dynamic_pointer_cast<const VirtualGridViewFunction<GridView,FieldVector<double,blocksize> > >(referenceSolution)->evaluateDerivativeLocal(element,
+ quadPos,
+ ref_di);
else
referenceSolution->evaluateDerivative(element.geometry().global(quadPos), ref_di);
#endif
@@ -660,19 +660,19 @@ void measureAnalyticalEOC(const GridView gridView,
<< "L^2 error: " << std::sqrt(l2Error)
#else
auto l2Error = DiscretizationError<GridView>::computeL2Error(numericalSolution.get(),
- referenceSolution.get(),
- quadKey);
+ referenceSolution.get(),
+ quadKey);
auto h1Error = DiscretizationError<GridView>::computeH1HalfNormDifferenceSquared(gridView,
- numericalSolution.get(),
- referenceSolution.get(),
- quadKey);
+ numericalSolution.get(),
+ referenceSolution.get(),
+ quadKey);
std::cout << "elements: " << gridView.size(0)
<< " "
<< "L^2 error: " << l2Error
#endif
- << " ";
+ << " ";
std::cout << "h^1 error: " << std::sqrt(h1Error) << std::endl;
}
}
@@ -690,20 +690,20 @@ void measureEOC(const std::shared_ptr<GridType> grid,
switch (order)
{
- case 1:
+ case 1 :
measureDiscreteEOC<typename GridType::LeafGridView,1,TargetSpace>(grid->leafGridView(), referenceGrid->leafGridView(), parameterSet);
break;
- case 2:
+ case 2 :
measureDiscreteEOC<typename GridType::LeafGridView,2,TargetSpace>(grid->leafGridView(), referenceGrid->leafGridView(), parameterSet);
break;
- case 3:
+ case 3 :
measureDiscreteEOC<typename GridType::LeafGridView,3,TargetSpace>(grid->leafGridView(), referenceGrid->leafGridView(), parameterSet);
break;
- default:
- DUNE_THROW(NotImplemented, "Order '" << order << "' is not implemented");
+ default :
+ DUNE_THROW(NotImplemented, "Order '" << order << "' is not implemented");
}
return; // Success
}
@@ -712,20 +712,20 @@ void measureEOC(const std::shared_ptr<GridType> grid,
{
switch (order)
{
- case 1:
+ case 1 :
measureAnalyticalEOC<typename GridType::LeafGridView,1,TargetSpace>(grid->leafGridView(), parameterSet);
break;
- case 2:
+ case 2 :
measureAnalyticalEOC<typename GridType::LeafGridView,2,TargetSpace>(grid->leafGridView(), parameterSet);
break;
- case 3:
+ case 3 :
measureAnalyticalEOC<typename GridType::LeafGridView,3,TargetSpace>(grid->leafGridView(), parameterSet);
break;
- default:
- DUNE_THROW(NotImplemented, "Order '" << order << "' is not implemented");
+ default :
+ DUNE_THROW(NotImplemented, "Order '" << order << "' is not implemented");
}
return; // Success
}
@@ -743,9 +743,9 @@ int main (int argc, char *argv[]) try
Python::run("import math");
Python::runStream()
- << std::endl << "import sys"
- << std::endl << "sys.path.append('/home/sander/dune/dune-gfe/problems')"
- << std::endl;
+ << std::endl << "import sys"
+ << std::endl << "sys.path.append('/home/sander/dune/dune-gfe/problems')"
+ << std::endl;
// parse data file
ParameterTree parameterSet;
@@ -763,10 +763,10 @@ int main (int argc, char *argv[]) try
// Create the grids
/////////////////////////////////////////
#if HAVE_DUNE_FOAMGRID
- typedef std::conditional<dim==1 or dim!=dimworld,FoamGrid<dim,dimworld>,UGGrid<dim> >::type GridType;
+ typedef std::conditional<dim==1 or dim!=dimworld,FoamGrid<dim,dimworld>,UGGrid<dim> >::type GridType;
#else
- static_assert(dim==dimworld, "You need to have dune-foamgrid installed for dim != dimworld!");
- typedef std::conditional<dim==1,OneDGrid,UGGrid<dim> >::type GridType;
+ static_assert(dim==dimworld, "You need to have dune-foamgrid installed for dim != dimworld!");
+ typedef std::conditional<dim==1,OneDGrid,UGGrid<dim> >::type GridType;
#endif
const int numLevels = parameterSet.get<int>("numLevels");
@@ -818,102 +818,102 @@ int main (int argc, char *argv[]) try
switch (targetDim)
{
- case 1:
- if (targetSpace=="RealTuple")
- {
- measureEOC<GridType,RealTuple<double,1> >(grid,
- referenceGrid,
- parameterSet);
- } else if (targetSpace=="UnitVector")
- {
- measureEOC<GridType,UnitVector<double,1> >(grid,
- referenceGrid,
- parameterSet);
- } else
- DUNE_THROW(NotImplemented, "Target space '" << targetSpace << "' is not implemented");
- break;
+ case 1 :
+ if (targetSpace=="RealTuple")
+ {
+ measureEOC<GridType,RealTuple<double,1> >(grid,
+ referenceGrid,
+ parameterSet);
+ } else if (targetSpace=="UnitVector")
+ {
+ measureEOC<GridType,UnitVector<double,1> >(grid,
+ referenceGrid,
+ parameterSet);
+ } else
+ DUNE_THROW(NotImplemented, "Target space '" << targetSpace << "' is not implemented");
+ break;
- case 2:
- if (targetSpace=="RealTuple")
- {
- measureEOC<GridType,RealTuple<double,2> >(grid,
- referenceGrid,
- parameterSet);
- } else if (targetSpace=="UnitVector")
- {
- measureEOC<GridType,UnitVector<double,2> >(grid,
- referenceGrid,
- parameterSet);
-#if 0
- } else if (targetSpace=="Rotation")
- {
- measureEOC<GridType,Rotation<double,2> >(grid,
+ case 2 :
+ if (targetSpace=="RealTuple")
+ {
+ measureEOC<GridType,RealTuple<double,2> >(grid,
+ referenceGrid,
+ parameterSet);
+ } else if (targetSpace=="UnitVector")
+ {
+ measureEOC<GridType,UnitVector<double,2> >(grid,
referenceGrid,
parameterSet);
- } else if (targetSpace=="RigidBodyMotion")
- {
- measureEOC<GridType,RigidBodyMotion<double,2> >(grid,
- referenceGrid,
- parameterSet);
+#if 0
+ } else if (targetSpace=="Rotation")
+ {
+ measureEOC<GridType,Rotation<double,2> >(grid,
+ referenceGrid,
+ parameterSet);
+ } else if (targetSpace=="RigidBodyMotion")
+ {
+ measureEOC<GridType,RigidBodyMotion<double,2> >(grid,
+ referenceGrid,
+ parameterSet);
#endif
- } else
- DUNE_THROW(NotImplemented, "Target space '" << targetSpace << "' is not implemented");
- break;
+ } else
+ DUNE_THROW(NotImplemented, "Target space '" << targetSpace << "' is not implemented");
+ break;
- case 3:
- if (targetSpace=="RealTuple")
- {
- measureEOC<GridType,RealTuple<double,3> >(grid,
- referenceGrid,
- parameterSet);
- } else if (targetSpace=="UnitVector")
- {
- measureEOC<GridType,UnitVector<double,3> >(grid,
- referenceGrid,
- parameterSet);
- } else if (targetSpace=="Rotation")
- {
- measureEOC<GridType,Rotation<double,3> >(grid,
+ case 3 :
+ if (targetSpace=="RealTuple")
+ {
+ measureEOC<GridType,RealTuple<double,3> >(grid,
+ referenceGrid,
+ parameterSet);
+ } else if (targetSpace=="UnitVector")
+ {
+ measureEOC<GridType,UnitVector<double,3> >(grid,
referenceGrid,
parameterSet);
- } else if (targetSpace=="RigidBodyMotion")
- {
- measureEOC<GridType,RigidBodyMotion<double,3> >(grid,
- referenceGrid,
- parameterSet);
- } else
- DUNE_THROW(NotImplemented, "Target space '" << targetSpace << "' is not implemented");
- break;
+ } else if (targetSpace=="Rotation")
+ {
+ measureEOC<GridType,Rotation<double,3> >(grid,
+ referenceGrid,
+ parameterSet);
+ } else if (targetSpace=="RigidBodyMotion")
+ {
+ measureEOC<GridType,RigidBodyMotion<double,3> >(grid,
+ referenceGrid,
+ parameterSet);
+ } else
+ DUNE_THROW(NotImplemented, "Target space '" << targetSpace << "' is not implemented");
+ break;
- case 4:
- if (targetSpace=="RealTuple")
- {
- measureEOC<GridType,RealTuple<double,4> >(grid,
- referenceGrid,
- parameterSet);
- } else if (targetSpace=="UnitVector")
- {
- measureEOC<GridType,UnitVector<double,4> >(grid,
- referenceGrid,
- parameterSet);
-#if 0
- } else if (targetSpace=="Rotation")
- {
- measureEOC<GridType,Rotation<double,4> >(grid,
+ case 4 :
+ if (targetSpace=="RealTuple")
+ {
+ measureEOC<GridType,RealTuple<double,4> >(grid,
+ referenceGrid,
+ parameterSet);
+ } else if (targetSpace=="UnitVector")
+ {
+ measureEOC<GridType,UnitVector<double,4> >(grid,
referenceGrid,
parameterSet);
- } else if (targetSpace=="RigidBodyMotion")
- {
- measureEOC<GridType,RigidBodyMotion<double,4> >(grid,
- referenceGrid,
- parameterSet);
+#if 0
+ } else if (targetSpace=="Rotation")
+ {
+ measureEOC<GridType,Rotation<double,4> >(grid,
+ referenceGrid,
+ parameterSet);
+ } else if (targetSpace=="RigidBodyMotion")
+ {
+ measureEOC<GridType,RigidBodyMotion<double,4> >(grid,
+ referenceGrid,
+ parameterSet);
#endif
- } else
- DUNE_THROW(NotImplemented, "Target space '" << targetSpace << "' is not implemented");
- break;
+ } else
+ DUNE_THROW(NotImplemented, "Target space '" << targetSpace << "' is not implemented");
+ break;
- default:
- DUNE_THROW(NotImplemented, "Target dimension '" << targetDim << "' is not implemented");
+ default :
+ DUNE_THROW(NotImplemented, "Target dimension '" << targetDim << "' is not implemented");
}
return 0;
diff --git a/src/cosserat-continuum.cc b/src/cosserat-continuum.cc
index b8428902..c81a9192 100644
--- a/src/cosserat-continuum.cc
+++ b/src/cosserat-continuum.cc
@@ -101,321 +101,325 @@ using namespace Dune;
int main (int argc, char *argv[]) try
{
- // initialize MPI, finalize is done automatically on exit
- Dune::MPIHelper& mpiHelper = MPIHelper::instance(argc, argv);
+ // initialize MPI, finalize is done automatically on exit
+ Dune::MPIHelper& mpiHelper = MPIHelper::instance(argc, argv);
- if (mpiHelper.rank()==0) {
- std::cout << "DISPLACEMENTORDER = " << displacementOrder << ", ROTATIONORDER = " << rotationOrder << std::endl;
- std::cout << "dim = " << dim << ", dimworld = " << dimworld << std::endl;
+ if (mpiHelper.rank()==0) {
+ std::cout << "DISPLACEMENTORDER = " << displacementOrder << ", ROTATIONORDER = " << rotationOrder << std::endl;
+ std::cout << "dim = " << dim << ", dimworld = " << dimworld << std::endl;
#if MIXED_SPACE
- std::cout << "MIXED_SPACE = 1" << std::endl;
+ std::cout << "MIXED_SPACE = 1" << std::endl;
#else
- std::cout << "MIXED_SPACE = 0" << std::endl;
+ std::cout << "MIXED_SPACE = 0" << std::endl;
#endif
- }
- // Start Python interpreter
- Python::start();
- Python::Reference main = Python::import("__main__");
- Python::run("import math");
-
- //feenableexcept(FE_INVALID);
- Python::runStream()
- << std::endl << "import sys"
- << std::endl << "sys.path.append('" << argv[1] << "')"
- << std::endl;
-
- using namespace TypeTree::Indices;
- using SolutionType = TupleVector<std::vector<RealTuple<double,3> >,
- std::vector<Rotation<double,3> > >;
-
- // parse data file
- ParameterTree parameterSet;
- if (argc < 3)
- DUNE_THROW(Exception, "Usage: ./cosserat-continuum <python path> <parameter file>");
-
- ParameterTreeParser::readINITree(argv[2], parameterSet);
-
- ParameterTreeParser::readOptions(argc, argv, parameterSet);
-
- // read solver settings
- const int numLevels = parameterSet.get<int>("numLevels");
- int numHomotopySteps = parameterSet.get<int>("numHomotopySteps");
- const double tolerance = parameterSet.get<double>("tolerance");
- const int maxSolverSteps = parameterSet.get<int>("maxSolverSteps");
- const double initialRegularization = parameterSet.get<double>("initialRegularization", 1000);
- const double initialTrustRegionRadius = parameterSet.get<double>("initialTrustRegionRadius");
- const int multigridIterations = parameterSet.get<int>("numIt");
- const int nu1 = parameterSet.get<int>("nu1");
- const int nu2 = parameterSet.get<int>("nu2");
- const int mu = parameterSet.get<int>("mu");
- const int baseIterations = parameterSet.get<int>("baseIt");
- const double mgTolerance = parameterSet.get<double>("mgTolerance");
- const double baseTolerance = parameterSet.get<double>("baseTolerance");
- const bool instrumented = parameterSet.get<bool>("instrumented");
- const bool adolcScalarMode = parameterSet.get<bool>("adolcScalarMode", false);
- const std::string resultPath = parameterSet.get("resultPath", "");
-
- // ///////////////////////////////////////
- // Create the grid
- // ///////////////////////////////////////
+ }
+ // Start Python interpreter
+ Python::start();
+ Python::Reference main = Python::import("__main__");
+ Python::run("import math");
+
+ //feenableexcept(FE_INVALID);
+ Python::runStream()
+ << std::endl << "import sys"
+ << std::endl << "sys.path.append('" << argv[1] << "')"
+ << std::endl;
+
+ using namespace TypeTree::Indices;
+ using SolutionType = TupleVector<std::vector<RealTuple<double,3> >,
+ std::vector<Rotation<double,3> > >;
+
+ // parse data file
+ ParameterTree parameterSet;
+ if (argc < 3)
+ DUNE_THROW(Exception, "Usage: ./cosserat-continuum <python path> <parameter file>");
+
+ ParameterTreeParser::readINITree(argv[2], parameterSet);
+
+ ParameterTreeParser::readOptions(argc, argv, parameterSet);
+
+ // read solver settings
+ const int numLevels = parameterSet.get<int>("numLevels");
+ int numHomotopySteps = parameterSet.get<int>("numHomotopySteps");
+ const double tolerance = parameterSet.get<double>("tolerance");
+ const int maxSolverSteps = parameterSet.get<int>("maxSolverSteps");
+ const double initialRegularization = parameterSet.get<double>("initialRegularization", 1000);
+ const double initialTrustRegionRadius = parameterSet.get<double>("initialTrustRegionRadius");
+ const int multigridIterations = parameterSet.get<int>("numIt");
+ const int nu1 = parameterSet.get<int>("nu1");
+ const int nu2 = parameterSet.get<int>("nu2");
+ const int mu = parameterSet.get<int>("mu");
+ const int baseIterations = parameterSet.get<int>("baseIt");
+ const double mgTolerance = parameterSet.get<double>("mgTolerance");
+ const double baseTolerance = parameterSet.get<double>("baseTolerance");
+ const bool instrumented = parameterSet.get<bool>("instrumented");
+ const bool adolcScalarMode = parameterSet.get<bool>("adolcScalarMode", false);
+ const std::string resultPath = parameterSet.get("resultPath", "");
+
+ // ///////////////////////////////////////
+ // Create the grid
+ // ///////////////////////////////////////
#if HAVE_DUNE_FOAMGRID
- typedef std::conditional<dim==dimworld,UGGrid<dim>, FoamGrid<dim,dimworld> >::type GridType;
+ typedef std::conditional<dim==dimworld,UGGrid<dim>, FoamGrid<dim,dimworld> >::type GridType;
#else
- static_assert(dim==dimworld, "FoamGrid needs to be installed to allow problems with dim != dimworld.");
- typedef UGGrid<dim> GridType;
+ static_assert(dim==dimworld, "FoamGrid needs to be installed to allow problems with dim != dimworld.");
+ typedef UGGrid<dim> GridType;
#endif
- std::shared_ptr<GridType> grid;
+ std::shared_ptr<GridType> grid;
- GridFactory<GridType> factory;
- Gmsh4::LagrangeGridCreator creator{factory};
+ GridFactory<GridType> factory;
+ Gmsh4::LagrangeGridCreator creator{factory};
- FieldVector<double,dimworld> lower(0), upper(1);
+ FieldVector<double,dimworld> lower(0), upper(1);
- std::string structuredGridType = parameterSet["structuredGrid"];
- if (structuredGridType == "cube") {
- if (dim!=dimworld)
- DUNE_THROW(GridError, "Please use FoamGrid and read in a grid for problems with dim != dimworld.");
+ std::string structuredGridType = parameterSet["structuredGrid"];
+ if (structuredGridType == "cube") {
+ if (dim!=dimworld)
+ DUNE_THROW(GridError, "Please use FoamGrid and read in a grid for problems with dim != dimworld.");
- lower = parameterSet.get<FieldVector<double,dimworld> >("lower");
- upper = parameterSet.get<FieldVector<double,dimworld> >("upper");
+ lower = parameterSet.get<FieldVector<double,dimworld> >("lower");
+ upper = parameterSet.get<FieldVector<double,dimworld> >("upper");
- auto elements = parameterSet.get<std::array<unsigned int,dim> >("elements");
- grid = StructuredGridFactory<GridType>::createCubeGrid(lower, upper, elements);
+ auto elements = parameterSet.get<std::array<unsigned int,dim> >("elements");
+ grid = StructuredGridFactory<GridType>::createCubeGrid(lower, upper, elements);
- } else {
- std::string path = parameterSet.get<std::string>("path", "");
- std::string gridFile = parameterSet.get<std::string>("gridFile");
+ } else {
+ std::string path = parameterSet.get<std::string>("path", "");
+ std::string gridFile = parameterSet.get<std::string>("gridFile");
- // Guess the grid file format by looking at the file name suffix
- auto dotPos = gridFile.rfind('.');
- if (dotPos == std::string::npos)
- DUNE_THROW(IOError, "Could not determine grid input file format");
- std::string suffix = gridFile.substr(dotPos, gridFile.length()-dotPos);
+ // Guess the grid file format by looking at the file name suffix
+ auto dotPos = gridFile.rfind('.');
+ if (dotPos == std::string::npos)
+ DUNE_THROW(IOError, "Could not determine grid input file format");
+ std::string suffix = gridFile.substr(dotPos, gridFile.length()-dotPos);
- if (suffix == ".msh") {
- Gmsh4Reader reader{creator};
- reader.read(path + "/" + gridFile);
- grid = factory.createGrid();
- } else if (suffix == ".vtu" or suffix == ".vtp")
+ if (suffix == ".msh") {
+ Gmsh4Reader reader{creator};
+ reader.read(path + "/" + gridFile);
+ grid = factory.createGrid();
+ } else if (suffix == ".vtu" or suffix == ".vtp")
#if HAVE_DUNE_VTK
- grid = VtkReader<GridType>::createGridFromFile(path + "/" + gridFile);
+ grid = VtkReader<GridType>::createGridFromFile(path + "/" + gridFile);
#else
- DUNE_THROW(NotImplemented, "Please install dune-vtk for VTK reading support!");
+ DUNE_THROW(NotImplemented, "Please install dune-vtk for VTK reading support!");
#endif
- }
+ }
- grid->globalRefine(numLevels-1);
+ grid->globalRefine(numLevels-1);
- grid->loadBalance();
+ grid->loadBalance();
- if (mpiHelper.rank()==0)
- std::cout << "There are " << grid->leafGridView().comm().size() << " processes" << std::endl;
+ if (mpiHelper.rank()==0)
+ std::cout << "There are " << grid->leafGridView().comm().size() << " processes" << std::endl;
- typedef GridType::LeafGridView GridView;
- GridView gridView = grid->leafGridView();
+ typedef GridType::LeafGridView GridView;
+ GridView gridView = grid->leafGridView();
- using namespace Dune::Functions::BasisFactory;
+ using namespace Dune::Functions::BasisFactory;
- const int dimRotation = Rotation<double,3>::embeddedDim;
- auto compositeBasis = makeBasis(
- gridView,
- composite(
- power<3>(
- lagrange<displacementOrder>()
+ const int dimRotation = Rotation<double,3>::embeddedDim;
+ auto compositeBasis = makeBasis(
+ gridView,
+ composite(
+ power<3>(
+ lagrange<displacementOrder>()
),
- power<dimRotation>(
- lagrange<rotationOrder>()
+ power<dimRotation>(
+ lagrange<rotationOrder>()
)
- ));
- using CompositeBasis = decltype(compositeBasis);
-
- auto deformationPowerBasis = makeBasis(
- gridView,
- power<3>(
- lagrange<displacementOrder>()
- ));
-
- auto orientationPowerBasis = makeBasis(
- gridView,
- power<3>(
- power<3>(
- lagrange<rotationOrder>()
+ ));
+ using CompositeBasis = decltype(compositeBasis);
+
+ auto deformationPowerBasis = makeBasis(
+ gridView,
+ power<3>(
+ lagrange<displacementOrder>()
+ ));
+
+ auto orientationPowerBasis = makeBasis(
+ gridView,
+ power<3>(
+ power<3>(
+ lagrange<rotationOrder>()
)
- ));
+ ));
- BlockVector<FieldVector<double,dimworld> > identityDeformation(compositeBasis.size({0}));
- auto identityDeformationBasis = makeBasis(
- gridView,
- power<dimworld>(
- lagrange<displacementOrder>()
- ));
- Dune::Functions::interpolate(identityDeformationBasis, identityDeformation, [&](FieldVector<double,dimworld> x){ return x;});
+ BlockVector<FieldVector<double,dimworld> > identityDeformation(compositeBasis.size({0}));
+ auto identityDeformationBasis = makeBasis(
+ gridView,
+ power<dimworld>(
+ lagrange<displacementOrder>()
+ ));
+ Dune::Functions::interpolate(identityDeformationBasis, identityDeformation, [&](FieldVector<double,dimworld> x){
+ return x;
+ });
- BlockVector<FieldVector<double,dimworld> > identityRotation(compositeBasis.size({1}));
- auto identityRotationBasis = makeBasis(
- gridView,
- power<dimworld>(
- lagrange<rotationOrder>()
- ));
- Dune::Functions::interpolate(identityRotationBasis, identityRotation, [&](FieldVector<double,dimworld> x){ return x;});
+ BlockVector<FieldVector<double,dimworld> > identityRotation(compositeBasis.size({1}));
+ auto identityRotationBasis = makeBasis(
+ gridView,
+ power<dimworld>(
+ lagrange<rotationOrder>()
+ ));
+ Dune::Functions::interpolate(identityRotationBasis, identityRotation, [&](FieldVector<double,dimworld> x){
+ return x;
+ });
- typedef Dune::Functions::LagrangeBasis<GridView,displacementOrder> DeformationFEBasis;
- typedef Dune::Functions::LagrangeBasis<GridView,rotationOrder> OrientationFEBasis;
+ typedef Dune::Functions::LagrangeBasis<GridView,displacementOrder> DeformationFEBasis;
+ typedef Dune::Functions::LagrangeBasis<GridView,rotationOrder> OrientationFEBasis;
- DeformationFEBasis deformationFEBasis(gridView);
- OrientationFEBasis orientationFEBasis(gridView);
+ DeformationFEBasis deformationFEBasis(gridView);
+ OrientationFEBasis orientationFEBasis(gridView);
- // /////////////////////////////////////////
- // Read Dirichlet values
- // /////////////////////////////////////////
+ // /////////////////////////////////////////
+ // Read Dirichlet values
+ // /////////////////////////////////////////
- BitSetVector<1> neumannVertices(gridView.size(dim), false);
- BitSetVector<3> deformationDirichletDofs(deformationFEBasis.size(), false);
- BitSetVector<3> orientationDirichletDofs(orientationFEBasis.size(), false);
+ BitSetVector<1> neumannVertices(gridView.size(dim), false);
+ BitSetVector<3> deformationDirichletDofs(deformationFEBasis.size(), false);
+ BitSetVector<3> orientationDirichletDofs(orientationFEBasis.size(), false);
- const GridView::IndexSet& indexSet = gridView.indexSet();
+ const GridView::IndexSet& indexSet = gridView.indexSet();
- // Make Python function that computes which vertices are on the Dirichlet boundary, based on the vertex positions.
- std::string lambda = std::string("lambda x: (") + parameterSet.get<std::string>("dirichletVerticesPredicate") + std::string(")");
- auto pythonDirichletVertices = Python::make_function<FieldVector<bool,3>>(Python::evaluate(lambda));
+ // Make Python function that computes which vertices are on the Dirichlet boundary, based on the vertex positions.
+ std::string lambda = std::string("lambda x: (") + parameterSet.get<std::string>("dirichletVerticesPredicate") + std::string(")");
+ auto pythonDirichletVertices = Python::make_function<FieldVector<bool,3> >(Python::evaluate(lambda));
- lambda = std::string("lambda x: (") + parameterSet.get<std::string>("dirichletRotationVerticesPredicate") + std::string(")");
- auto pythonOrientationDirichletVertices = Python::make_function<bool>(Python::evaluate(lambda));
+ lambda = std::string("lambda x: (") + parameterSet.get<std::string>("dirichletRotationVerticesPredicate") + std::string(")");
+ auto pythonOrientationDirichletVertices = Python::make_function<bool>(Python::evaluate(lambda));
- // Same for the Neumann boundary
- lambda = std::string("lambda x: (") + parameterSet.get<std::string>("neumannVerticesPredicate", "0") + std::string(")");
- auto pythonNeumannVertices = Python::make_function<bool>(Python::evaluate(lambda));
+ // Same for the Neumann boundary
+ lambda = std::string("lambda x: (") + parameterSet.get<std::string>("neumannVerticesPredicate", "0") + std::string(")");
+ auto pythonNeumannVertices = Python::make_function<bool>(Python::evaluate(lambda));
- for (auto&& vertex : vertices(gridView))
- {
- bool isNeumann = pythonNeumannVertices(vertex.geometry().corner(0));
- neumannVertices[indexSet.index(vertex)] = isNeumann;
- }
+ for (auto&& vertex : vertices(gridView))
+ {
+ bool isNeumann = pythonNeumannVertices(vertex.geometry().corner(0));
+ neumannVertices[indexSet.index(vertex)] = isNeumann;
+ }
- BoundaryPatch<GridView> neumannBoundary(gridView, neumannVertices);
+ BoundaryPatch<GridView> neumannBoundary(gridView, neumannVertices);
- std::cout << "On rank " << mpiHelper.rank() << ": Neumann boundary has " << neumannBoundary.numFaces()
- << " faces and " << neumannVertices.count() << " degrees of freedom.\n";
-
- BitSetVector<1> neumannNodes(deformationFEBasis.size(), false);
- constructBoundaryDofs(neumannBoundary,deformationFEBasis,neumannNodes);
+ std::cout << "On rank " << mpiHelper.rank() << ": Neumann boundary has " << neumannBoundary.numFaces()
+ << " faces and " << neumannVertices.count() << " degrees of freedom.\n";
- for (size_t i=0; i<deformationFEBasis.size(); i++) {
- FieldVector<bool,3> isDirichlet;
- isDirichlet = pythonDirichletVertices(identityDeformation[i]);
- for (size_t j=0; j<3; j++)
- deformationDirichletDofs[i][j] = isDirichlet[j];
- }
+ BitSetVector<1> neumannNodes(deformationFEBasis.size(), false);
+ constructBoundaryDofs(neumannBoundary,deformationFEBasis,neumannNodes);
+ for (size_t i=0; i<deformationFEBasis.size(); i++) {
+ FieldVector<bool,3> isDirichlet;
+ isDirichlet = pythonDirichletVertices(identityDeformation[i]);
+ for (size_t j=0; j<3; j++)
+ deformationDirichletDofs[i][j] = isDirichlet[j];
+ }
- for (size_t i=0; i<orientationFEBasis.size(); i++) {
- bool isDirichletOrientation = pythonOrientationDirichletVertices(identityRotation[i]);
- for (size_t j=0; j<3; j++)
- orientationDirichletDofs[i][j] = isDirichletOrientation;
- }
- std::cout << "On rank " << mpiHelper.rank() << ": Dirichlet boundary has " << deformationDirichletDofs.count() << " degrees of freedom.\n";
- std::cout << "On rank " << mpiHelper.rank() << ": Dirichlet boundary (orientation) has " << orientationDirichletDofs.count() << " degrees of freedom.\n";
+ for (size_t i=0; i<orientationFEBasis.size(); i++) {
+ bool isDirichletOrientation = pythonOrientationDirichletVertices(identityRotation[i]);
+ for (size_t j=0; j<3; j++)
+ orientationDirichletDofs[i][j] = isDirichletOrientation;
+ }
- // //////////////////////////
- // Initial iterate
- // //////////////////////////
+ std::cout << "On rank " << mpiHelper.rank() << ": Dirichlet boundary has " << deformationDirichletDofs.count() << " degrees of freedom.\n";
+ std::cout << "On rank " << mpiHelper.rank() << ": Dirichlet boundary (orientation) has " << orientationDirichletDofs.count() << " degrees of freedom.\n";
- SolutionType x;
+ // //////////////////////////
+ // Initial iterate
+ // //////////////////////////
- x[_0].resize(compositeBasis.size({0}));
+ SolutionType x;
- lambda = std::string("lambda x: (") + parameterSet.get<std::string>("initialDeformation") + std::string(")");
- auto pythonInitialDeformation = Python::make_function<FieldVector<double,3> >(Python::evaluate(lambda));
+ x[_0].resize(compositeBasis.size({0}));
- std::vector<FieldVector<double,3> > v;
- Functions::interpolate(deformationPowerBasis, v, pythonInitialDeformation);
+ lambda = std::string("lambda x: (") + parameterSet.get<std::string>("initialDeformation") + std::string(")");
+ auto pythonInitialDeformation = Python::make_function<FieldVector<double,3> >(Python::evaluate(lambda));
- for (size_t i=0; i<x[_0].size(); i++)
- x[_0][i] = v[i];
+ std::vector<FieldVector<double,3> > v;
+ Functions::interpolate(deformationPowerBasis, v, pythonInitialDeformation);
- x[_1].resize(compositeBasis.size({1}));
+ for (size_t i=0; i<x[_0].size(); i++)
+ x[_0][i] = v[i];
+
+ x[_1].resize(compositeBasis.size({1}));
#if !MIXED_SPACE
- if (parameterSet.hasKey("startFromFile"))
+ if (parameterSet.hasKey("startFromFile"))
+ {
+ std::shared_ptr<GridType> initialIterateGrid;
+ if (parameterSet.get<bool>("structuredGrid"))
{
- std::shared_ptr<GridType> initialIterateGrid;
- if (parameterSet.get<bool>("structuredGrid"))
- {
- std::array<unsigned int,dim> elements = parameterSet.get<std::array<unsigned int,dim> >("elements");
- initialIterateGrid = StructuredGridFactory<GridType>::createCubeGrid(lower, upper, elements);
- }
- else
- {
- std::string path = parameterSet.get<std::string>("path");
- std::string initialIterateGridFilename = parameterSet.get<std::string>("initialIterateGridFilename");
+ std::array<unsigned int,dim> elements = parameterSet.get<std::array<unsigned int,dim> >("elements");
+ initialIterateGrid = StructuredGridFactory<GridType>::createCubeGrid(lower, upper, elements);
+ }
+ else
+ {
+ std::string path = parameterSet.get<std::string>("path");
+ std::string initialIterateGridFilename = parameterSet.get<std::string>("initialIterateGridFilename");
- initialIterateGrid = std::shared_ptr<GridType>(Gmsh4Reader<GridType>::createGridFromFile(path + "/" + initialIterateGridFilename));
- }
+ initialIterateGrid = std::shared_ptr<GridType>(Gmsh4Reader<GridType>::createGridFromFile(path + "/" + initialIterateGridFilename));
+ }
- std::vector<TargetSpace> initialIterate;
- GFE::CosseratVTKReader::read(initialIterate, parameterSet.get<std::string>("initialIterateFilename"));
+ std::vector<TargetSpace> initialIterate;
+ GFE::CosseratVTKReader::read(initialIterate, parameterSet.get<std::string>("initialIterateFilename"));
- typedef Dune::Functions::LagrangeBasis<typename GridType::LeafGridView, 2> InitialBasis;
- InitialBasis initialBasis(initialIterateGrid->leafGridView());
+ typedef Dune::Functions::LagrangeBasis<typename GridType::LeafGridView, 2> InitialBasis;
+ InitialBasis initialBasis(initialIterateGrid->leafGridView());
#ifdef PROJECTED_INTERPOLATION
- using LocalInterpolationRule = GFE::LocalProjectedFEFunction<dim, double, DeformationFEBasis::LocalView::Tree::FiniteElement, TargetSpace>;
+ using LocalInterpolationRule = GFE::LocalProjectedFEFunction<dim, double, DeformationFEBasis::LocalView::Tree::FiniteElement, TargetSpace>;
#else
- using LocalInterpolationRule = LocalGeodesicFEFunction<dim, double, DeformationFEBasis::LocalView::Tree::FiniteElement, TargetSpace>;
+ using LocalInterpolationRule = LocalGeodesicFEFunction<dim, double, DeformationFEBasis::LocalView::Tree::FiniteElement, TargetSpace>;
#endif
- GFE::EmbeddedGlobalGFEFunction<InitialBasis,LocalInterpolationRule,TargetSpace> initialFunction(initialBasis,initialIterate);
- auto powerBasis = makeBasis(
- gridView,
- power<7>(
- lagrange<displacementOrder>()
- ));
- std::vector<FieldVector<double,7> > v;
- //TODO: Interpolate does not work with an GFE:EmbeddedGlobalGFEFunction
- //Dune::Functions::interpolate(powerBasis,v,initialFunction);
-
- for (size_t i=0; i<x.size(); i++) {
- auto vTargetSpace = TargetSpace(v[i]);
- x[_0][i] = vTargetSpace.r;
- x[_1][i] = vTargetSpace.q;
- }
+ GFE::EmbeddedGlobalGFEFunction<InitialBasis,LocalInterpolationRule,TargetSpace> initialFunction(initialBasis,initialIterate);
+ auto powerBasis = makeBasis(
+ gridView,
+ power<7>(
+ lagrange<displacementOrder>()
+ ));
+ std::vector<FieldVector<double,7> > v;
+ //TODO: Interpolate does not work with an GFE:EmbeddedGlobalGFEFunction
+ //Dune::Functions::interpolate(powerBasis,v,initialFunction);
+
+ for (size_t i=0; i<x.size(); i++) {
+ auto vTargetSpace = TargetSpace(v[i]);
+ x[_0][i] = vTargetSpace.r;
+ x[_1][i] = vTargetSpace.q;
}
+ }
#endif
- ////////////////////////////////////////////////////////
- // Main homotopy loop
- ////////////////////////////////////////////////////////
+ ////////////////////////////////////////////////////////
+ // Main homotopy loop
+ ////////////////////////////////////////////////////////
- // Output initial iterate (of homotopy loop)
- if (dim == 2 && dimworld == 2) {
+ // Output initial iterate (of homotopy loop)
+ if (dim == 2 && dimworld == 2) {
CosseratVTKWriter<GridType>::writeMixed<DeformationFEBasis,OrientationFEBasis>(deformationFEBasis,x[_0],
orientationFEBasis,x[_1],
resultPath + "cosserat_homotopy_0_l" + std::to_string(numLevels));
- } else if (dim == 2 && dimworld == 3) {
+ } else if (dim == 2 && dimworld == 3) {
#if MIXED_SPACE
CosseratVTKWriter<GridType>::write<DeformationFEBasis>(deformationFEBasis, x[_0], resultPath + "cosserat_homotopy_0_l" + std::to_string(numLevels));
#else
CosseratVTKWriter<GridType>::write<DeformationFEBasis>(deformationFEBasis, x, resultPath + "cosserat_homotopy_0_l" + std::to_string(numLevels));
-#endif
- } else if (dim == 3 && dimworld == 3) {
-
+#endif
+ } else if (dim == 3 && dimworld == 3) {
+
BlockVector<FieldVector<double,dimworld> > displacement(x[_0].size());
for (size_t i=0; i<x[_0].size(); i++) {
- for (int j = 0; j < 3; j ++)
- displacement[i][j] = x[_0][i][j] - identityDeformation[i][j];
+ for (int j = 0; j < 3; j ++)
+ displacement[i][j] = x[_0][i][j] - identityDeformation[i][j];
}
- auto displacementFunction = Dune::Functions::makeDiscreteGlobalBasisFunction<FieldVector<double,dim>>(deformationPowerBasis, displacement);
+ auto displacementFunction = Dune::Functions::makeDiscreteGlobalBasisFunction<FieldVector<double,dim> >(deformationPowerBasis, displacement);
SubsamplingVTKWriter<GridView> vtkWriter(gridView, Dune::refinementLevels(displacementOrder-1));
vtkWriter.addVertexData(displacementFunction, VTK::FieldInfo("displacement", VTK::FieldInfo::Type::scalar, dim));
vtkWriter.write(resultPath + "cosserat_homotopy_0_l" + std::to_string(numLevels));
- }
- for (int i=0; i<numHomotopySteps; i++) {
+ }
+ for (int i=0; i<numHomotopySteps; i++) {
- double homotopyParameter = (i+1)*(1.0/numHomotopySteps);
- if (mpiHelper.rank()==0)
- std::cout << "Homotopy step: " << i << ", parameter: " << homotopyParameter << std::endl;
+ double homotopyParameter = (i+1)*(1.0/numHomotopySteps);
+ if (mpiHelper.rank()==0)
+ std::cout << "Homotopy step: " << i << ", parameter: " << homotopyParameter << std::endl;
// ////////////////////////////////////////////////////////////
@@ -425,13 +429,13 @@ int main (int argc, char *argv[]) try
const ParameterTree& materialParameters = parameterSet.sub("materialParameters");
FieldVector<double,3> neumannValues {0,0,0};
if (parameterSet.hasKey("neumannValues"))
- neumannValues = parameterSet.get<FieldVector<double,3> >("neumannValues");
+ neumannValues = parameterSet.get<FieldVector<double,3> >("neumannValues");
auto neumannFunction = [&]( FieldVector<double,dimworld> ) {
- auto nV = neumannValues;
- nV *= (-homotopyParameter);
- return nV;
- };
+ auto nV = neumannValues;
+ nV *= (-homotopyParameter);
+ return nV;
+ };
Python::Reference volumeLoadClass = Python::import(parameterSet.get<std::string>("volumeLoadPythonFunction", "zero-volume-load"));
Python::Callable volumeLoadCallable = volumeLoadClass.get("VolumeLoad");
@@ -443,66 +447,105 @@ int main (int argc, char *argv[]) try
auto volumeLoad = Python::make_function<FieldVector<double,3> > (volumeLoadPythonObject.get("volumeLoad"));
if (mpiHelper.rank() == 0) {
- std::cout << "Material parameters:" << std::endl;
- materialParameters.report();
+ std::cout << "Material parameters:" << std::endl;
+ materialParameters.report();
}
- ////////////////////////////////////////////////////////
- // Set Dirichlet values
- ////////////////////////////////////////////////////////
-
- Python::Reference dirichletValuesClass = Python::import(parameterSet.get<std::string>("problem") + "-dirichlet-values");
-
- Python::Callable C = dirichletValuesClass.get("DirichletValues");
-
- // Call a constructor.
- Python::Reference dirichletValuesPythonObject = C(homotopyParameter);
-
- // Extract object member functions as Dune functions
- auto deformationDirichletValues = Python::make_function<FieldVector<double,3> > (dirichletValuesPythonObject.get("deformation"));
- auto orientationDirichletValues = Python::make_function<FieldMatrix<double,3,3> > (dirichletValuesPythonObject.get("orientation"));
-
- BlockVector<FieldVector<double,3> > ddV;
- Dune::Functions::interpolate(deformationPowerBasis, ddV, deformationDirichletValues);
-
- BlockVector<FieldMatrix<double,3,3> > dOV;
- Dune::Functions::interpolate(orientationPowerBasis, dOV, orientationDirichletValues);
-
- for (std::size_t i = 0; i < compositeBasis.size({0}); i++) {
- FieldVector<double,3> x0i = x[_0][i].globalCoordinates();
- for (int j=0; j<3; j++) {
- if (deformationDirichletDofs[i][j])
- x0i[j] = ddV[i][j];
- }
- x[_0][i] = x0i;
- }
- for (std::size_t i = 0; i < compositeBasis.size({1}); i++)
- if (orientationDirichletDofs[i][0])
- x[_1][i].set(dOV[i]);
-
- if (dim==dimworld) {
- CosseratEnergyLocalStiffness<CompositeBasis, 3,adouble> localCosseratEnergy(materialParameters,
- &neumannBoundary,
- neumannFunction,
- volumeLoad);
- MixedLocalGFEADOLCStiffness<CompositeBasis,
- RealTuple<double,3>,
- Rotation<double,3> > localGFEADOLCStiffness(&localCosseratEnergy, adolcScalarMode);
- MixedGFEAssembler<CompositeBasis,
- RealTuple<double,3>,
- Rotation<double,3> > mixedAssembler(compositeBasis, &localGFEADOLCStiffness);
+ ////////////////////////////////////////////////////////
+ // Set Dirichlet values
+ ////////////////////////////////////////////////////////
+
+ Python::Reference dirichletValuesClass = Python::import(parameterSet.get<std::string>("problem") + "-dirichlet-values");
+
+ Python::Callable C = dirichletValuesClass.get("DirichletValues");
+
+ // Call a constructor.
+ Python::Reference dirichletValuesPythonObject = C(homotopyParameter);
+
+ // Extract object member functions as Dune functions
+ auto deformationDirichletValues = Python::make_function<FieldVector<double,3> > (dirichletValuesPythonObject.get("deformation"));
+ auto orientationDirichletValues = Python::make_function<FieldMatrix<double,3,3> > (dirichletValuesPythonObject.get("orientation"));
+
+ BlockVector<FieldVector<double,3> > ddV;
+ Dune::Functions::interpolate(deformationPowerBasis, ddV, deformationDirichletValues);
+
+ BlockVector<FieldMatrix<double,3,3> > dOV;
+ Dune::Functions::interpolate(orientationPowerBasis, dOV, orientationDirichletValues);
+
+ for (std::size_t i = 0; i < compositeBasis.size({0}); i++) {
+ FieldVector<double,3> x0i = x[_0][i].globalCoordinates();
+ for (int j=0; j<3; j++) {
+ if (deformationDirichletDofs[i][j])
+ x0i[j] = ddV[i][j];
+ }
+ x[_0][i] = x0i;
+ }
+ for (std::size_t i = 0; i < compositeBasis.size({1}); i++)
+ if (orientationDirichletDofs[i][0])
+ x[_1][i].set(dOV[i]);
+
+ if (dim==dimworld) {
+ CosseratEnergyLocalStiffness<CompositeBasis, 3,adouble> localCosseratEnergy(materialParameters,
+ &neumannBoundary,
+ neumannFunction,
+ volumeLoad);
+ MixedLocalGFEADOLCStiffness<CompositeBasis,
+ RealTuple<double,3>,
+ Rotation<double,3> > localGFEADOLCStiffness(&localCosseratEnergy, adolcScalarMode);
+ MixedGFEAssembler<CompositeBasis,
+ RealTuple<double,3>,
+ Rotation<double,3> > mixedAssembler(compositeBasis, &localGFEADOLCStiffness);
#if MIXED_SPACE
- MixedRiemannianTrustRegionSolver<GridType,
- CompositeBasis,
- DeformationFEBasis, RealTuple<double,3>,
- OrientationFEBasis, Rotation<double,3> > solver;
- solver.setup(*grid,
- &mixedAssembler,
- deformationFEBasis,
- orientationFEBasis,
- x,
- deformationDirichletDofs,
- orientationDirichletDofs, tolerance,
+ MixedRiemannianTrustRegionSolver<GridType,
+ CompositeBasis,
+ DeformationFEBasis, RealTuple<double,3>,
+ OrientationFEBasis, Rotation<double,3> > solver;
+ solver.setup(*grid,
+ &mixedAssembler,
+ deformationFEBasis,
+ orientationFEBasis,
+ x,
+ deformationDirichletDofs,
+ orientationDirichletDofs, tolerance,
+ maxSolverSteps,
+ initialTrustRegionRadius,
+ multigridIterations,
+ mgTolerance,
+ mu, nu1, nu2,
+ baseIterations,
+ baseTolerance,
+ instrumented);
+
+ solver.setScaling(parameterSet.get<FieldVector<double,6> >("solverScaling"));
+
+ solver.setInitialIterate(x);
+ solver.solve();
+ x = solver.getSol();
+#else
+ //The MixedRiemannianTrustRegionSolver can treat the Displacement and Orientation Space as separate ones
+ //The RiemannianTrustRegionSolver can only treat the Displacement and Rotation together in a RigidBodyMotion
+ //Therefore, x and the dirichletDofs are converted to a RigidBodyMotion structure, as well as the Hessian and Gradient that are returned by the assembler
+ std::vector<TargetSpace> xTargetSpace(compositeBasis.size({0}));
+ BitSetVector<TargetSpace::TangentVector::dimension> dirichletDofsTargetSpace(compositeBasis.size({0}), false);
+ for (std::size_t i = 0; i < compositeBasis.size({0}); i++) {
+ for (int j = 0; j < 3; j ++) { // Displacement part
+ xTargetSpace[i].r[j] = x[_0][i][j];
+ dirichletDofsTargetSpace[i][j] = deformationDirichletDofs[i][j];
+ }
+ xTargetSpace[i].q = x[_1][i]; // Rotation part
+ for (int j = 3; j < TargetSpace::TangentVector::dimension; j ++)
+ dirichletDofsTargetSpace[i][j] = orientationDirichletDofs[i][j-3];
+ }
+
+ using GFEAssemblerWrapper = Dune::GFE::GeodesicFEAssemblerWrapper<CompositeBasis, DeformationFEBasis, TargetSpace, RealTuple<double, 3>, Rotation<double,3> >;
+ GFEAssemblerWrapper assembler(&mixedAssembler, deformationFEBasis);
+ if (parameterSet.get<std::string>("solvertype", "trustRegion") == "trustRegion") {
+ RiemannianTrustRegionSolver<DeformationFEBasis, TargetSpace, GFEAssemblerWrapper> solver;
+ solver.setup(*grid,
+ &assembler,
+ xTargetSpace,
+ dirichletDofsTargetSpace,
+ tolerance,
maxSolverSteps,
initialTrustRegionRadius,
multigridIterations,
@@ -512,97 +555,97 @@ int main (int argc, char *argv[]) try
baseTolerance,
instrumented);
- solver.setScaling(parameterSet.get<FieldVector<double,6> >("solverScaling"));
-
- solver.setInitialIterate(x);
- solver.solve();
- x = solver.getSol();
-#else
- //The MixedRiemannianTrustRegionSolver can treat the Displacement and Orientation Space as separate ones
- //The RiemannianTrustRegionSolver can only treat the Displacement and Rotation together in a RigidBodyMotion
- //Therefore, x and the dirichletDofs are converted to a RigidBodyMotion structure, as well as the Hessian and Gradient that are returned by the assembler
- std::vector<TargetSpace> xTargetSpace(compositeBasis.size({0}));
- BitSetVector<TargetSpace::TangentVector::dimension> dirichletDofsTargetSpace(compositeBasis.size({0}), false);
- for (std::size_t i = 0; i < compositeBasis.size({0}); i++) {
- for (int j = 0; j < 3; j ++) { // Displacement part
- xTargetSpace[i].r[j] = x[_0][i][j];
- dirichletDofsTargetSpace[i][j] = deformationDirichletDofs[i][j];
- }
- xTargetSpace[i].q = x[_1][i]; // Rotation part
- for (int j = 3; j < TargetSpace::TangentVector::dimension; j ++)
- dirichletDofsTargetSpace[i][j] = orientationDirichletDofs[i][j-3];
- }
-
- using GFEAssemblerWrapper = Dune::GFE::GeodesicFEAssemblerWrapper<CompositeBasis, DeformationFEBasis, TargetSpace, RealTuple<double, 3>, Rotation<double,3>>;
- GFEAssemblerWrapper assembler(&mixedAssembler, deformationFEBasis);
- if (parameterSet.get<std::string>("solvertype", "trustRegion") == "trustRegion") {
- RiemannianTrustRegionSolver<DeformationFEBasis, TargetSpace, GFEAssemblerWrapper> solver;
- solver.setup(*grid,
- &assembler,
- xTargetSpace,
- dirichletDofsTargetSpace,
- tolerance,
- maxSolverSteps,
- initialTrustRegionRadius,
- multigridIterations,
- mgTolerance,
- mu, nu1, nu2,
- baseIterations,
- baseTolerance,
- instrumented);
-
- solver.setScaling(parameterSet.get<FieldVector<double,6> >("solverScaling"));
- solver.setInitialIterate(xTargetSpace);
- solver.solve();
- xTargetSpace = solver.getSol();
- } else {
- RiemannianProximalNewtonSolver<DeformationFEBasis, TargetSpace, GFEAssemblerWrapper> solver;
- solver.setup(*grid,
- &assembler,
- xTargetSpace,
- dirichletDofsTargetSpace,
- tolerance,
- maxSolverSteps,
- initialRegularization,
- instrumented);
- solver.setScaling(parameterSet.get<FieldVector<double,6> >("solverScaling"));
- solver.setInitialIterate(xTargetSpace);
- solver.solve();
- xTargetSpace = solver.getSol();
- }
- for (std::size_t i = 0; i < xTargetSpace.size(); i++) {
- x[_0][i] = xTargetSpace[i].r;
- x[_1][i] = xTargetSpace[i].q;
- }
+ solver.setScaling(parameterSet.get<FieldVector<double,6> >("solverScaling"));
+ solver.setInitialIterate(xTargetSpace);
+ solver.solve();
+ xTargetSpace = solver.getSol();
+ } else {
+ RiemannianProximalNewtonSolver<DeformationFEBasis, TargetSpace, GFEAssemblerWrapper> solver;
+ solver.setup(*grid,
+ &assembler,
+ xTargetSpace,
+ dirichletDofsTargetSpace,
+ tolerance,
+ maxSolverSteps,
+ initialRegularization,
+ instrumented);
+ solver.setScaling(parameterSet.get<FieldVector<double,6> >("solverScaling"));
+ solver.setInitialIterate(xTargetSpace);
+ solver.solve();
+ xTargetSpace = solver.getSol();
+ }
+ for (std::size_t i = 0; i < xTargetSpace.size(); i++) {
+ x[_0][i] = xTargetSpace[i].r;
+ x[_1][i] = xTargetSpace[i].q;
+ }
#endif
- } else { //dim != dimworld
- using StiffnessType = MixedLocalGFEADOLCStiffness<CompositeBasis, RealTuple<double,3>, Rotation<double,3>>;
- std::shared_ptr<StiffnessType> localGFEStiffness;
+ } else { //dim != dimworld
+ using StiffnessType = MixedLocalGFEADOLCStiffness<CompositeBasis, RealTuple<double,3>, Rotation<double,3> >;
+ std::shared_ptr<StiffnessType> localGFEStiffness;
#if HAVE_DUNE_CURVEDGEOMETRY && WORLD_DIM == 3 && GRID_DIM == 2
- NonplanarCosseratShellEnergy<CompositeBasis, 3, adouble, decltype(creator)> localCosseratEnergy(materialParameters,
- &creator,
- &neumannBoundary,
- neumannFunction,
- volumeLoad);
+ NonplanarCosseratShellEnergy<CompositeBasis, 3, adouble, decltype(creator)> localCosseratEnergy(materialParameters,
+ &creator,
+ &neumannBoundary,
+ neumannFunction,
+ volumeLoad);
- localGFEStiffness = std::make_shared<StiffnessType>(&localCosseratEnergy, adolcScalarMode);
+ localGFEStiffness = std::make_shared<StiffnessType>(&localCosseratEnergy, adolcScalarMode);
#endif
- MixedGFEAssembler<CompositeBasis,
- RealTuple<double,3>,
- Rotation<double,3> > mixedAssembler(compositeBasis, localGFEStiffness.get());
+ MixedGFEAssembler<CompositeBasis,
+ RealTuple<double,3>,
+ Rotation<double,3> > mixedAssembler(compositeBasis, localGFEStiffness.get());
#if MIXED_SPACE
- MixedRiemannianTrustRegionSolver<GridType,
- CompositeBasis,
- DeformationFEBasis, RealTuple<double,3>,
- OrientationFEBasis, Rotation<double,3> > solver;
- solver.setup(*grid,
- &mixedAssembler,
- deformationFEBasis,
- orientationFEBasis,
- x,
- deformationDirichletDofs,
- orientationDirichletDofs, tolerance,
+ MixedRiemannianTrustRegionSolver<GridType,
+ CompositeBasis,
+ DeformationFEBasis, RealTuple<double,3>,
+ OrientationFEBasis, Rotation<double,3> > solver;
+ solver.setup(*grid,
+ &mixedAssembler,
+ deformationFEBasis,
+ orientationFEBasis,
+ x,
+ deformationDirichletDofs,
+ orientationDirichletDofs, tolerance,
+ maxSolverSteps,
+ initialTrustRegionRadius,
+ multigridIterations,
+ mgTolerance,
+ mu, nu1, nu2,
+ baseIterations,
+ baseTolerance,
+ instrumented);
+
+ solver.setScaling(parameterSet.get<FieldVector<double,6> >("solverScaling"));
+
+ solver.setInitialIterate(x);
+ solver.solve();
+ x = solver.getSol();
+#else
+ //The MixedRiemannianTrustRegionSolver can treat the Displacement and Orientation Space as separate ones
+ //The RiemannianTrustRegionSolver can only treat the Displacement and Rotation together in a RigidBodyMotion
+ //Therefore, x and the dirichletDofs are converted to a RigidBodyMotion structure, as well as the Hessian and Gradient that are returned by the assembler
+ std::vector<TargetSpace> xTargetSpace(compositeBasis.size({0}));
+ BitSetVector<TargetSpace::TangentVector::dimension> dirichletDofsTargetSpace(compositeBasis.size({0}), false);
+ for (std::size_t i = 0; i < compositeBasis.size({0}); i++) {
+ for (int j = 0; j < 3; j ++) { // Displacement part
+ xTargetSpace[i].r[j] = x[_0][i][j];
+ dirichletDofsTargetSpace[i][j] = deformationDirichletDofs[i][j];
+ }
+ xTargetSpace[i].q = x[_1][i]; // Rotation part
+ for (int j = 3; j < TargetSpace::TangentVector::dimension; j ++)
+ dirichletDofsTargetSpace[i][j] = orientationDirichletDofs[i][j-3];
+ }
+
+ using GFEAssemblerWrapper = Dune::GFE::GeodesicFEAssemblerWrapper<CompositeBasis, DeformationFEBasis, TargetSpace, RealTuple<double, 3>, Rotation<double,3> >;
+ GFEAssemblerWrapper assembler(&mixedAssembler, deformationFEBasis);
+ if (parameterSet.get<std::string>("solvertype", "trustRegion") == "trustRegion") {
+ RiemannianTrustRegionSolver<DeformationFEBasis, TargetSpace, GFEAssemblerWrapper> solver;
+ solver.setup(*grid,
+ &assembler,
+ xTargetSpace,
+ dirichletDofsTargetSpace,
+ tolerance,
maxSolverSteps,
initialTrustRegionRadius,
multigridIterations,
@@ -612,124 +655,85 @@ int main (int argc, char *argv[]) try
baseTolerance,
instrumented);
- solver.setScaling(parameterSet.get<FieldVector<double,6> >("solverScaling"));
+ solver.setScaling(parameterSet.get<FieldVector<double,6> >("solverScaling"));
+ solver.setInitialIterate(xTargetSpace);
+ solver.solve();
+ xTargetSpace = solver.getSol();
+ } else { //parameterSet.get<std::string>("solvertype") == "proximalNewton"
+ RiemannianProximalNewtonSolver<DeformationFEBasis, TargetSpace, GFEAssemblerWrapper> solver;
+ solver.setup(*grid,
+ &assembler,
+ xTargetSpace,
+ dirichletDofsTargetSpace,
+ tolerance,
+ maxSolverSteps,
+ initialRegularization,
+ instrumented);
+ solver.setScaling(parameterSet.get<FieldVector<double,6> >("solverScaling"));
+ solver.setInitialIterate(xTargetSpace);
+ solver.solve();
+ xTargetSpace = solver.getSol();
+ }
- solver.setInitialIterate(x);
- solver.solve();
- x = solver.getSol();
-#else
- //The MixedRiemannianTrustRegionSolver can treat the Displacement and Orientation Space as separate ones
- //The RiemannianTrustRegionSolver can only treat the Displacement and Rotation together in a RigidBodyMotion
- //Therefore, x and the dirichletDofs are converted to a RigidBodyMotion structure, as well as the Hessian and Gradient that are returned by the assembler
- std::vector<TargetSpace> xTargetSpace(compositeBasis.size({0}));
- BitSetVector<TargetSpace::TangentVector::dimension> dirichletDofsTargetSpace(compositeBasis.size({0}), false);
- for (std::size_t i = 0; i < compositeBasis.size({0}); i++) {
- for (int j = 0; j < 3; j ++) { // Displacement part
- xTargetSpace[i].r[j] = x[_0][i][j];
- dirichletDofsTargetSpace[i][j] = deformationDirichletDofs[i][j];
- }
- xTargetSpace[i].q = x[_1][i]; // Rotation part
- for (int j = 3; j < TargetSpace::TangentVector::dimension; j ++)
- dirichletDofsTargetSpace[i][j] = orientationDirichletDofs[i][j-3];
- }
-
- using GFEAssemblerWrapper = Dune::GFE::GeodesicFEAssemblerWrapper<CompositeBasis, DeformationFEBasis, TargetSpace, RealTuple<double, 3>, Rotation<double,3>>;
- GFEAssemblerWrapper assembler(&mixedAssembler, deformationFEBasis);
- if (parameterSet.get<std::string>("solvertype", "trustRegion") == "trustRegion") {
- RiemannianTrustRegionSolver<DeformationFEBasis, TargetSpace, GFEAssemblerWrapper> solver;
- solver.setup(*grid,
- &assembler,
- xTargetSpace,
- dirichletDofsTargetSpace,
- tolerance,
- maxSolverSteps,
- initialTrustRegionRadius,
- multigridIterations,
- mgTolerance,
- mu, nu1, nu2,
- baseIterations,
- baseTolerance,
- instrumented);
-
- solver.setScaling(parameterSet.get<FieldVector<double,6> >("solverScaling"));
- solver.setInitialIterate(xTargetSpace);
- solver.solve();
- xTargetSpace = solver.getSol();
- } else { //parameterSet.get<std::string>("solvertype") == "proximalNewton"
- RiemannianProximalNewtonSolver<DeformationFEBasis, TargetSpace, GFEAssemblerWrapper> solver;
- solver.setup(*grid,
- &assembler,
- xTargetSpace,
- dirichletDofsTargetSpace,
- tolerance,
- maxSolverSteps,
- initialRegularization,
- instrumented);
- solver.setScaling(parameterSet.get<FieldVector<double,6> >("solverScaling"));
- solver.setInitialIterate(xTargetSpace);
- solver.solve();
- xTargetSpace = solver.getSol();
- }
-
- for (std::size_t i = 0; i < xTargetSpace.size(); i++) {
- x[_0][i] = xTargetSpace[i].r;
- x[_1][i] = xTargetSpace[i].q;
- }
+ for (std::size_t i = 0; i < xTargetSpace.size(); i++) {
+ x[_0][i] = xTargetSpace[i].r;
+ x[_1][i] = xTargetSpace[i].q;
+ }
#endif
- }
- // Output result of each homotopy step
- std::stringstream iAsAscii;
- iAsAscii << i+1;
-
- if (dim == 2 && dimworld == 2) {
- CosseratVTKWriter<GridType>::writeMixed<DeformationFEBasis,OrientationFEBasis>(deformationFEBasis,x[_0],
- orientationFEBasis,x[_1],
- resultPath + "cosserat_homotopy_" + iAsAscii.str());
- } else if (dim == 2 && dimworld == 3) {
+ }
+ // Output result of each homotopy step
+ std::stringstream iAsAscii;
+ iAsAscii << i+1;
+
+ if (dim == 2 && dimworld == 2) {
+ CosseratVTKWriter<GridType>::writeMixed<DeformationFEBasis,OrientationFEBasis>(deformationFEBasis,x[_0],
+ orientationFEBasis,x[_1],
+ resultPath + "cosserat_homotopy_" + iAsAscii.str());
+ } else if (dim == 2 && dimworld == 3) {
#if MIXED_SPACE
- CosseratVTKWriter<GridType>::write<DeformationFEBasis>(deformationFEBasis, x[_0], resultPath + "cosserat_homotopy_" + std::to_string(i+1) + "_l" + std::to_string(numLevels));
-#else
- CosseratVTKWriter<GridType>::write<DeformationFEBasis>(deformationFEBasis, x, resultPath + "cosserat_homotopy_" + std::to_string(i+1) + "_l" + std::to_string(numLevels));
+ CosseratVTKWriter<GridType>::write<DeformationFEBasis>(deformationFEBasis, x[_0], resultPath + "cosserat_homotopy_" + std::to_string(i+1) + "_l" + std::to_string(numLevels));
+#else
+ CosseratVTKWriter<GridType>::write<DeformationFEBasis>(deformationFEBasis, x, resultPath + "cosserat_homotopy_" + std::to_string(i+1) + "_l" + std::to_string(numLevels));
#endif
- } else if (dim == 3 && dimworld == 3) {
-
- BlockVector<FieldVector<double,dimworld> > displacement(x[_0].size());
- for (size_t i=0; i<x[_0].size(); i++) {
- for (int j = 0; j < 3; j ++)
- displacement[i][j] = x[_0][i][j] - identityDeformation[i][j];
- }
+ } else if (dim == 3 && dimworld == 3) {
- auto displacementFunction = Dune::Functions::makeDiscreteGlobalBasisFunction<FieldVector<double,dim>>(deformationPowerBasis, displacement);
- SubsamplingVTKWriter<GridView> vtkWriter(gridView, Dune::refinementLevels(displacementOrder-1));
- vtkWriter.addVertexData(displacementFunction, VTK::FieldInfo("displacement", VTK::FieldInfo::Type::scalar, dim));
- vtkWriter.write(resultPath + "cosserat_homotopy_" + std::to_string(i+1) + "_l" + std::to_string(numLevels));
- }
+ BlockVector<FieldVector<double,dimworld> > displacement(x[_0].size());
+ for (size_t i=0; i<x[_0].size(); i++) {
+ for (int j = 0; j < 3; j ++)
+ displacement[i][j] = x[_0][i][j] - identityDeformation[i][j];
+ }
+
+ auto displacementFunction = Dune::Functions::makeDiscreteGlobalBasisFunction<FieldVector<double,dim> >(deformationPowerBasis, displacement);
+ SubsamplingVTKWriter<GridView> vtkWriter(gridView, Dune::refinementLevels(displacementOrder-1));
+ vtkWriter.addVertexData(displacementFunction, VTK::FieldInfo("displacement", VTK::FieldInfo::Type::scalar, dim));
+ vtkWriter.write(resultPath + "cosserat_homotopy_" + std::to_string(i+1) + "_l" + std::to_string(numLevels));
}
+ }
- // //////////////////////////////
- // Output result
- // //////////////////////////////
+ // //////////////////////////////
+ // Output result
+ // //////////////////////////////
#if !MIXED_SPACE
- // Write the corresponding coefficient vector: verbatim in binary, to be completely lossless
- // This data may be used by other applications measuring the discretization error
- BlockVector<TargetSpace::CoordinateType> xEmbedded(compositeBasis.size({0}));
- for (size_t i=0; i<compositeBasis.size({0}); i++)
- for (size_t j=0; j<TargetSpace::TangentVector::dimension; j++)
- xEmbedded[i][j] = j < 3 ? x[_0][i][j] : x[_1][i].globalCoordinates()[j-3];
-
- std::ofstream outFile("cosserat-continuum-result-" + std::to_string(numLevels) + ".data", std::ios_base::binary);
- MatrixVector::Generic::writeBinary(outFile, xEmbedded);
- outFile.close();
+ // Write the corresponding coefficient vector: verbatim in binary, to be completely lossless
+ // This data may be used by other applications measuring the discretization error
+ BlockVector<TargetSpace::CoordinateType> xEmbedded(compositeBasis.size({0}));
+ for (size_t i=0; i<compositeBasis.size({0}); i++)
+ for (size_t j=0; j<TargetSpace::TangentVector::dimension; j++)
+ xEmbedded[i][j] = j < 3 ? x[_0][i][j] : x[_1][i].globalCoordinates()[j-3];
+
+ std::ofstream outFile("cosserat-continuum-result-" + std::to_string(numLevels) + ".data", std::ios_base::binary);
+ MatrixVector::Generic::writeBinary(outFile, xEmbedded);
+ outFile.close();
#endif
- if (parameterSet.get<bool>("computeAverageNeumannDeflection", false) and parameterSet.hasKey("neumannValues")) {
+ if (parameterSet.get<bool>("computeAverageNeumannDeflection", false) and parameterSet.hasKey("neumannValues")) {
// finally: compute the average deformation of the Neumann boundary
// That is what we need for the locking tests
FieldVector<double,3> averageDef(0);
for (size_t i=0; i<x[_0].size(); i++)
- if (neumannNodes[i][0])
- averageDef += x[_0][i].globalCoordinates();
+ if (neumannNodes[i][0])
+ averageDef += x[_0][i].globalCoordinates();
averageDef /= neumannNodes.count();
if (mpiHelper.rank()==0 and parameterSet.hasKey("neumannValues"))
@@ -737,9 +741,10 @@ int main (int argc, char *argv[]) try
std::cout << "Neumann values = " << parameterSet.get<FieldVector<double, 3> >("neumannValues") << " "
<< ", average deflection: " << averageDef << std::endl;
}
- }
+ }
-} catch (Exception& e)
+}
+catch (Exception& e)
{
- std::cout << e.what() << std::endl;
+ std::cout << e.what() << std::endl;
}
diff --git a/src/film-on-substrate-stress-plot.cc b/src/film-on-substrate-stress-plot.cc
index a21523f4..77158d11 100644
--- a/src/film-on-substrate-stress-plot.cc
+++ b/src/film-on-substrate-stress-plot.cc
@@ -60,10 +60,10 @@ int main (int argc, char *argv[]) try
//feenableexcept(FE_INVALID);
Python::runStream()
- << std::endl << "import sys"
- << std::endl << "import os"
- << std::endl << "sys.path.append(os.getcwd() + '/../../problems/')"
- << std::endl;
+ << std::endl << "import sys"
+ << std::endl << "import os"
+ << std::endl << "sys.path.append(os.getcwd() + '/../../problems/')"
+ << std::endl;
// parse data file
ParameterTree parameterSet;
@@ -103,12 +103,12 @@ int main (int argc, char *argv[]) try
auto pythonSurfaceShellVertices = Python::make_function<bool>(Python::evaluate(lambda));
int numLevels = parameterSet.get<int>("numLevels");
-
+
while (numLevels > 0) {
- for (auto&& e : elements(grid->leafGridView())){
+ for (auto&& e : elements(grid->leafGridView())) {
bool isSurfaceShell = false;
for (int i = 0; i < e.geometry().corners(); i++) {
- isSurfaceShell = isSurfaceShell || pythonSurfaceShellVertices(e.geometry().corner(i));
+ isSurfaceShell = isSurfaceShell || pythonSurfaceShellVertices(e.geometry().corner(i));
}
grid->mark(isSurfaceShell ? 1 : 0,e);
}
@@ -122,8 +122,8 @@ int main (int argc, char *argv[]) try
if (grid->leafGridView().comm().size() > 1)
DUNE_THROW(Exception,
- std::string("To create a stress plot, please use only one process, now there are ") + std::to_string(grid->leafGridView().comm().size()) + std::string(" procsses."));
-
+ std::string("To create a stress plot, please use only one process, now there are ") + std::to_string(grid->leafGridView().comm().size()) + std::string(" procsses."));
+
typedef GridType::LeafGridView GridView;
GridView gridView = grid->leafGridView();
@@ -148,14 +148,14 @@ int main (int argc, char *argv[]) try
auto basisOrderD = makeBasis(
gridView,
power<dim>(
- lagrange<displacementOrder>()
- ));
+ lagrange<displacementOrder>()
+ ));
auto basisOrderR = makeBasis(
gridView,
power<dim>(
- lagrange<rotationOrder>()
- ));
+ lagrange<rotationOrder>()
+ ));
/////////////////////////////////////////////////////////////
// INITIAL DATA
@@ -169,14 +169,14 @@ int main (int argc, char *argv[]) try
std::cout << "... done: The basis has " << basisOrderD.size() << " elements and the defomation file has " << deformationMap.size() << " entries." << std::endl;
const auto dimRotation = Rotation<double,dim>::embeddedDim;
- std::unordered_map<std::string, FieldVector<double,dimRotation>> rotationMap;
+ std::unordered_map<std::string, FieldVector<double,dimRotation> > rotationMap;
if (parameterSet.hasKey("rotationOutput")) {
std::cout << "Reading in rotation file (" << "order is " << rotationOrder << "): " << pathToOutput + parameterSet.get<std::string>("rotationOutput") << std::endl;
rotationMap = Dune::GFE::transformFileToMap<dimRotation>(pathToOutput + parameterSet.get<std::string>("rotationOutput"));
}
const bool startFromFile = parameterSet.get<bool>("startFromFile");
- std::unordered_map<std::string, FieldVector<double,dim>> initialDeformationMap;
-
+ std::unordered_map<std::string, FieldVector<double,dim> > initialDeformationMap;
+
auto gridDeformationLambda = std::string("lambda x: (") + parameterSet.get<std::string>("gridDeformation") + std::string(")");
auto gridDeformation = Python::make_function<FieldVector<double,dim> >(Python::evaluate(gridDeformationLambda));
@@ -192,9 +192,13 @@ int main (int argc, char *argv[]) try
xInitial.resize(basisOrderD.size());
DisplacementVector displacement;
displacement.resize(basisOrderD.size());
-
- Functions::interpolate(basisOrderD, x, [](FieldVector<double,dim> x){ return x; });
- Functions::interpolate(basisOrderD, xInitial, [](FieldVector<double,dim> x){ return x; });
+
+ Functions::interpolate(basisOrderD, x, [](FieldVector<double,dim> x){
+ return x;
+ });
+ Functions::interpolate(basisOrderD, xInitial, [](FieldVector<double,dim> x){
+ return x;
+ });
for (std::size_t i = 0; i < basisOrderD.size(); i++) {
std::stringstream stream;
@@ -210,14 +214,16 @@ int main (int argc, char *argv[]) try
}
}
- using RotationVector = std::vector<Rotation<double,dim>>;
+ using RotationVector = std::vector<Rotation<double,dim> >;
RotationVector rot;
rot.resize(basisOrderR.size());
DisplacementVector xOrderR;
xOrderR.resize(basisOrderR.size());
- Functions::interpolate(basisOrderR, xOrderR, [](FieldVector<double,dim> x){ return x; });
-
- using DirectorVector = std::vector<Dune::FieldVector<double,dim>>;
+ Functions::interpolate(basisOrderR, xOrderR, [](FieldVector<double,dim> x){
+ return x;
+ });
+
+ using DirectorVector = std::vector<Dune::FieldVector<double,dim> >;
std::array<DirectorVector,3> rot_director;
rot_director[0].resize(basisOrderR.size());
rot_director[1].resize(basisOrderR.size());
@@ -239,42 +245,42 @@ int main (int argc, char *argv[]) try
/////////////////////////////////////////////////////////////
int quadOrder = parameterSet.hasKey("quadOrder") ? parameterSet.get<int>("quadOrder") : 4;
- auto stressAssembler = GFE::SurfaceCosseratStressAssembler<decltype(basisOrderD),decltype(basisOrderR), FieldVector<double,dim>, Rotation<double,dim>>
- (basisOrderD, basisOrderR);
-
+ auto stressAssembler = GFE::SurfaceCosseratStressAssembler<decltype(basisOrderD),decltype(basisOrderR), FieldVector<double,dim>, Rotation<double,dim> >
+ (basisOrderD, basisOrderR);
+
std::cout << "Selected energy is: " << parameterSet.get<std::string>("energy") << std::endl;
- std::shared_ptr<Elasticity::LocalDensity<dim,ValueType>> elasticDensity;
+ std::shared_ptr<Elasticity::LocalDensity<dim,ValueType> > elasticDensity;
const ParameterTree& materialParameters = parameterSet.sub("materialParameters");
if (parameterSet.get<std::string>("energy") == "stvenantkirchhoff")
- elasticDensity = std::make_shared<Elasticity::StVenantKirchhoffDensity<dim,ValueType>>(materialParameters);
+ elasticDensity = std::make_shared<Elasticity::StVenantKirchhoffDensity<dim,ValueType> >(materialParameters);
if (parameterSet.get<std::string>("energy") == "neohooke")
- elasticDensity = std::make_shared<Elasticity::NeoHookeDensity<dim,ValueType>>(materialParameters);
+ elasticDensity = std::make_shared<Elasticity::NeoHookeDensity<dim,ValueType> >(materialParameters);
if (parameterSet.get<std::string>("energy") == "hencky")
- elasticDensity = std::make_shared<Elasticity::HenckyDensity<dim,ValueType>>(materialParameters);
+ elasticDensity = std::make_shared<Elasticity::HenckyDensity<dim,ValueType> >(materialParameters);
if (parameterSet.get<std::string>("energy") == "exphencky")
- elasticDensity = std::make_shared<Elasticity::ExpHenckyDensity<dim,ValueType>>(materialParameters);
+ elasticDensity = std::make_shared<Elasticity::ExpHenckyDensity<dim,ValueType> >(materialParameters);
if (parameterSet.get<std::string>("energy") == "mooneyrivlin")
- elasticDensity = std::make_shared<Elasticity::MooneyRivlinDensity<dim,ValueType>>(materialParameters);
+ elasticDensity = std::make_shared<Elasticity::MooneyRivlinDensity<dim,ValueType> >(materialParameters);
if(!elasticDensity)
- DUNE_THROW(Exception, "Error: Selected energy not available!");
+ DUNE_THROW(Exception, "Error: Selected energy not available!");
Python::Reference surfaceShellClass = Python::import(materialParameters.get<std::string>("surfaceShellParameters"));
Python::Callable surfaceShellCallable = surfaceShellClass.get("SurfaceShellParameters");
Python::Reference pythonObject = surfaceShellCallable();
auto fLame = Python::make_function<FieldVector<double, 2> >(pythonObject.get("lame"));
- std::vector<FieldMatrix<double,dim,dim>> stressSubstrate1stPiolaKirchhoffTensor;
- std::vector<FieldMatrix<double,dim,dim>> stressSubstrateCauchyTensor;
+ std::vector<FieldMatrix<double,dim,dim> > stressSubstrate1stPiolaKirchhoffTensor;
+ std::vector<FieldMatrix<double,dim,dim> > stressSubstrateCauchyTensor;
std::cout << "Assemble stress for the substrate.." << std::endl;
- stressAssembler.assembleSubstrateStress<Elasticity::LocalDensity<dim,ValueType>>(x, elasticDensity.get(), quadOrder, stressSubstrate1stPiolaKirchhoffTensor, stressSubstrateCauchyTensor);
+ stressAssembler.assembleSubstrateStress<Elasticity::LocalDensity<dim,ValueType> >(x, elasticDensity.get(), quadOrder, stressSubstrate1stPiolaKirchhoffTensor, stressSubstrateCauchyTensor);
- std::vector<FieldMatrix<double,dim,dim>> stressShellBiotTensor;
+ std::vector<FieldMatrix<double,dim,dim> > stressShellBiotTensor;
std::cout << "Assemble stress for the shell.." << std::endl;
- stressAssembler.assembleShellStress(rot, x, xInitial, fLame,/*mu_c*/0, surfaceShellBoundary, quadOrder, stressShellBiotTensor);
+ stressAssembler.assembleShellStress(rot, x, xInitial, fLame,/*mu_c*/ 0, surfaceShellBoundary, quadOrder, stressShellBiotTensor);
std::vector<double> stressSubstrate1stPiolaKirchhoff(stressSubstrate1stPiolaKirchhoffTensor.size());
std::vector<double> stressSubstrateCauchy(stressSubstrate1stPiolaKirchhoffTensor.size());
@@ -296,12 +302,12 @@ int main (int argc, char *argv[]) try
stressShellBiot[i] = stressShellBiotTensor[i].frobenius_norm();
}
-
- auto displacementFunction = Functions::makeDiscreteGlobalBasisFunction<FieldVector<double,dim>>(basisOrderD, displacement);
- auto director0Function = Functions::makeDiscreteGlobalBasisFunction<FieldVector<double,dim>>(basisOrderR, rot_director[0]);
- auto director1Function = Functions::makeDiscreteGlobalBasisFunction<FieldVector<double,dim>>(basisOrderR, rot_director[1]);
- auto director2Function = Functions::makeDiscreteGlobalBasisFunction<FieldVector<double,dim>>(basisOrderR, rot_director[2]);
+ auto displacementFunction = Functions::makeDiscreteGlobalBasisFunction<FieldVector<double,dim> >(basisOrderD, displacement);
+
+ auto director0Function = Functions::makeDiscreteGlobalBasisFunction<FieldVector<double,dim> >(basisOrderR, rot_director[0]);
+ auto director1Function = Functions::makeDiscreteGlobalBasisFunction<FieldVector<double,dim> >(basisOrderR, rot_director[1]);
+ auto director2Function = Functions::makeDiscreteGlobalBasisFunction<FieldVector<double,dim> >(basisOrderR, rot_director[2]);
SubsamplingVTKWriter<GridView> vtkWriter(gridView, refinementLevels(displacementOrder-1));
vtkWriter.addVertexData(displacementFunction, VTK::FieldInfo("displacement", VTK::FieldInfo::Type::scalar, dim));
@@ -330,6 +336,7 @@ int main (int argc, char *argv[]) try
vtkWriterElementOnly.addVertexData(displacementFunction, VTK::FieldInfo("displacement", VTK::FieldInfo::Type::scalar, dim));
vtkWriterElementOnly.write("stress_plot_" + parameterSet.get<std::string>("energy") + "_element_only");
-} catch (Exception& e) {
- std::cout << e.what() << std::endl;
+}
+catch (Exception& e) {
+ std::cout << e.what() << std::endl;
}
diff --git a/src/film-on-substrate.cc b/src/film-on-substrate.cc
index 8c7d2bea..016275d8 100644
--- a/src/film-on-substrate.cc
+++ b/src/film-on-substrate.cc
@@ -121,9 +121,9 @@ int main (int argc, char *argv[]) try
//feenableexcept(FE_INVALID);
Python::runStream()
- << std::endl << "import sys"
- << std::endl << "sys.path.append('" << argv[1] << "')"
- << std::endl;
+ << std::endl << "import sys"
+ << std::endl << "sys.path.append('" << argv[1] << "')"
+ << std::endl;
// parse data file
ParameterTree parameterSet;
@@ -194,10 +194,10 @@ int main (int argc, char *argv[]) try
auto pythonAdaptiveRefinementVertices = Python::make_function<bool>(Python::evaluate(lambda));
while (numLevels > 0) {
- for (auto&& e : elements(grid->leafGridView())){
+ for (auto&& e : elements(grid->leafGridView())) {
bool refineHere = false;
for (int i = 0; i < e.geometry().corners(); i++) {
- refineHere = refineHere || pythonSurfaceShellVertices(e.geometry().corner(i)) || pythonAdaptiveRefinementVertices(e.geometry().corner(i));
+ refineHere = refineHere || pythonSurfaceShellVertices(e.geometry().corner(i)) || pythonAdaptiveRefinementVertices(e.geometry().corner(i));
}
grid->mark(refineHere ? 1 : 0, e);
}
@@ -216,13 +216,13 @@ int main (int argc, char *argv[]) try
GridView gridView = grid->leafGridView();
/////////////////////////////////////////////////////////////
- // DATA TYPES
+ // DATA TYPES
/////////////////////////////////////////////////////////////
using namespace Dune::Indices;
typedef std::vector<RealTuple<double,dim> > DisplacementVector;
- typedef std::vector<Rotation<double,dim>> RotationVector;
+ typedef std::vector<Rotation<double,dim> > RotationVector;
const int dimRotation = Rotation<double,dim>::embeddedDim;
typedef TupleVector<DisplacementVector, RotationVector> SolutionType;
@@ -236,25 +236,25 @@ int main (int argc, char *argv[]) try
composite(
power<dim>(
lagrange<displacementOrder>()
- ),
+ ),
power<dimRotation>(
lagrange<rotationOrder>()
- )
- ));
+ )
+ ));
auto deformationPowerBasis = makeBasis(
gridView,
power<dim>(
- lagrange<displacementOrder>()
- ));
+ lagrange<displacementOrder>()
+ ));
auto orientationPowerBasis = makeBasis(
- gridView,
+ gridView,
+ power<dim>(
power<dim>(
- power<dim>(
- lagrange<rotationOrder>()
- )
- ));
+ lagrange<rotationOrder>()
+ )
+ ));
typedef Dune::Functions::LagrangeBasis<GridView,displacementOrder> DeformationFEBasis;
typedef Dune::Functions::LagrangeBasis<GridView,rotationOrder> OrientationFEBasis;
@@ -293,12 +293,12 @@ int main (int argc, char *argv[]) try
BoundaryPatch<GridView> dirichletBoundaryX(gridView, dirichletVerticesX);
BoundaryPatch<GridView> dirichletBoundaryY(gridView, dirichletVerticesY);
BoundaryPatch<GridView> dirichletBoundaryZ(gridView, dirichletVerticesZ);
- auto neumannBoundary = std::make_shared<BoundaryPatch<GridView>>(gridView, neumannVertices);
+ auto neumannBoundary = std::make_shared<BoundaryPatch<GridView> >(gridView, neumannVertices);
BoundaryPatch<GridView> surfaceShellBoundary(gridView, surfaceShellVertices);
std::cout << "On rank " << mpiHelper.rank() << ": Dirichlet boundary has [" << dirichletBoundaryX.numFaces() <<
- ", " << dirichletBoundaryY.numFaces() <<
- ", " << dirichletBoundaryZ.numFaces() <<"] faces\n";
+ ", " << dirichletBoundaryY.numFaces() <<
+ ", " << dirichletBoundaryZ.numFaces() <<"] faces\n";
std::cout << "On rank " << mpiHelper.rank() << ": Neumann boundary has " << neumannBoundary->numFaces() << " faces\n";
std::cout << "On rank " << mpiHelper.rank() << ": Shell boundary has " << surfaceShellBoundary.numFaces() << " faces\n";
@@ -313,7 +313,7 @@ int main (int argc, char *argv[]) try
//Create BitVector matching the tangential space
const int dimRotationTangent = Rotation<double,dim>::TangentVector::dimension;
- typedef MultiTypeBlockVector<std::vector<FieldVector<double,dim> >, std::vector<FieldVector<double,dimRotationTangent>> > VectorForBit;
+ typedef MultiTypeBlockVector<std::vector<FieldVector<double,dim> >, std::vector<FieldVector<double,dimRotationTangent> > > VectorForBit;
typedef Solvers::DefaultBitVector_t<VectorForBit> BitVector;
BitVector dirichletDofs;
@@ -325,7 +325,7 @@ int main (int argc, char *argv[]) try
dirichletDofs[_0][i][2] = dirichletNodesZ[i][0];
}
for (size_t i = 0; i < compositeBasis.size({1}); i++) {
- for (int j = 0; j < dimRotationTangent; j++){
+ for (int j = 0; j < dimRotationTangent; j++) {
dirichletDofs[_1][i][j] = not surfaceShellNodes[i][0];
}
}
@@ -333,7 +333,7 @@ int main (int argc, char *argv[]) try
/////////////////////////////////////////////////////////////
// INITIAL DATA
/////////////////////////////////////////////////////////////
-
+
SolutionType x;
x[_0].resize(compositeBasis.size({0}));
x[_1].resize(compositeBasis.size({1}));
@@ -345,8 +345,10 @@ int main (int argc, char *argv[]) try
Dune::Functions::interpolate(deformationPowerBasis, displacement, pythonInitialDeformation);
BlockVector<FieldVector<double,dim> > identity(compositeBasis.size({0}));
- Dune::Functions::interpolate(deformationPowerBasis, identity, [](FieldVector<double,dim> x){ return x; });
-
+ Dune::Functions::interpolate(deformationPowerBasis, identity, [](FieldVector<double,dim> x){
+ return x;
+ });
+
double max_x = 0;
double initial_max_x = 0;
for (int i = 0; i < displacement.size(); i++) {
@@ -354,12 +356,12 @@ int main (int argc, char *argv[]) try
initial_max_x = std::max(x[_0][i][0], initial_max_x);
displacement[i] -= identity[i]; //Subtract identity to get the initial displacement as a function
}
- auto displacementFunction = Dune::Functions::makeDiscreteGlobalBasisFunction<FieldVector<double,dim>>(deformationPowerBasis, displacement);
+ auto displacementFunction = Dune::Functions::makeDiscreteGlobalBasisFunction<FieldVector<double,dim> >(deformationPowerBasis, displacement);
// We need to subsample, because VTK cannot natively display real second-order functions
SubsamplingVTKWriter<GridView> vtkWriter(gridView, Dune::refinementLevels(displacementOrder-1));
vtkWriter.addVertexData(displacementFunction, VTK::FieldInfo("displacement", VTK::FieldInfo::Type::scalar, dim));
vtkWriter.write(resultPath + "finite-strain_homotopy_" + parameterSet.get<std::string>("energy") + "_0");
-
+
/////////////////////////////////////////////////////////////
// STRESS-FREE SURFACE SHELL DATA
/////////////////////////////////////////////////////////////
@@ -368,7 +370,7 @@ int main (int argc, char *argv[]) try
power<dim>(
lagrange<stressFreeDataOrder>(),
blockedInterleaved()
- ));
+ ));
auto& idSet = grid->globalIdSet();
GlobalIndexSet<GridView> globalVertexIndexSet(gridView,dim);
@@ -377,9 +379,9 @@ int main (int argc, char *argv[]) try
if (startFromFile) {
const std::string pathToGridDeformationFile = parameterSet.get("pathToGridDeformationFile", "");
- std::unordered_map<std::string, FieldVector<double,3>> deformationMap;
+ std::unordered_map<std::string, FieldVector<double,3> > deformationMap;
std::string line, displacement, entry;
- if (mpiHelper.rank() == 0)
+ if (mpiHelper.rank() == 0)
std::cout << "Reading in deformation file (" << "order is " << stressFreeDataOrder << "): " << pathToGridDeformationFile + parameterSet.get<std::string>("gridDeformationFile") << std::endl;
// Read grid deformation information from the file specified in the parameter set via gridDeformationFile
@@ -404,7 +406,9 @@ int main (int argc, char *argv[]) try
} else {
DUNE_THROW(Exception, "Error: Could not open the file containing the deformation vector!");
}
- Dune::Functions::interpolate(stressFreeFEBasis, stressFreeShellVector, [](FieldVector<double,dim> x){ return x; });
+ Dune::Functions::interpolate(stressFreeFEBasis, stressFreeShellVector, [](FieldVector<double,dim> x){
+ return x;
+ });
for (auto& entry : stressFreeShellVector) {
std::stringstream stream;
@@ -418,16 +422,18 @@ int main (int argc, char *argv[]) try
Dune::Functions::interpolate(stressFreeFEBasis, stressFreeShellVector, gridDeformation);
}
- auto stressFreeShellFunction = Dune::Functions::makeDiscreteGlobalBasisFunction<FieldVector<double,dim>>(stressFreeFEBasis, stressFreeShellVector);
-
+ auto stressFreeShellFunction = Dune::Functions::makeDiscreteGlobalBasisFunction<FieldVector<double,dim> >(stressFreeFEBasis, stressFreeShellVector);
+
if (parameterSet.hasKey("writeOutStressFreeData") && parameterSet.get<bool>("writeOutStressFreeData")) {
BlockVector<FieldVector<double,dim> > stressFreeDisplacement(stressFreeFEBasis.size());
- Dune::Functions::interpolate(stressFreeFEBasis, stressFreeDisplacement, [](FieldVector<double,dim> x){ return (-1.0)*x; });
+ Dune::Functions::interpolate(stressFreeFEBasis, stressFreeDisplacement, [](FieldVector<double,dim> x){
+ return (-1.0)*x;
+ });
for (int i = 0; i < stressFreeFEBasis.size(); i++) {
stressFreeDisplacement[i] += stressFreeShellVector[i];
}
- auto stressFreeDisplacementFunction = Dune::Functions::makeDiscreteGlobalBasisFunction<FieldVector<double,dim>>(stressFreeFEBasis, stressFreeDisplacement);
+ auto stressFreeDisplacementFunction = Dune::Functions::makeDiscreteGlobalBasisFunction<FieldVector<double,dim> >(stressFreeFEBasis, stressFreeDisplacement);
//Write out the stress-free shell function that was read in
SubsamplingVTKWriter<GridView> vtkWriterStressFree(gridView, Dune::refinementLevels(1));
vtkWriterStressFree.addVertexData(stressFreeDisplacementFunction, VTK::FieldInfo("displacement", VTK::FieldInfo::Type::scalar, dim));
@@ -459,9 +465,9 @@ int main (int argc, char *argv[]) try
// ////////////////////////////////////////////////////////////
- // A constant vector-valued function, for simple Neumann boundary values
- std::shared_ptr<std::function<Dune::FieldVector<double,dim>(Dune::FieldVector<double,dim>)>> neumannFunctionPtr;
- neumannFunctionPtr = std::make_shared<std::function<Dune::FieldVector<double,dim>(Dune::FieldVector<double,dim>)>>([&](FieldVector<double,dim> ) {
+ // A constant vector-valued function, for simple Neumann boundary values
+ std::shared_ptr<std::function<Dune::FieldVector<double,dim>(Dune::FieldVector<double,dim>)> > neumannFunctionPtr;
+ neumannFunctionPtr = std::make_shared<std::function<Dune::FieldVector<double,dim>(Dune::FieldVector<double,dim>)> >([&](FieldVector<double,dim> ) {
return neumannValues * (-homotopyParameter);
});
@@ -479,43 +485,43 @@ int main (int argc, char *argv[]) try
// Create the energy functional
// /////////////////////////////////////////////////
- std::shared_ptr<Elasticity::LocalDensity<dim,ValueType>> elasticDensity;
+ std::shared_ptr<Elasticity::LocalDensity<dim,ValueType> > elasticDensity;
if (parameterSet.get<std::string>("energy") == "stvenantkirchhoff")
- elasticDensity = std::make_shared<Elasticity::StVenantKirchhoffDensity<dim,ValueType>>(materialParameters);
+ elasticDensity = std::make_shared<Elasticity::StVenantKirchhoffDensity<dim,ValueType> >(materialParameters);
if (parameterSet.get<std::string>("energy") == "neohooke")
- elasticDensity = std::make_shared<Elasticity::NeoHookeDensity<dim,ValueType>>(materialParameters);
+ elasticDensity = std::make_shared<Elasticity::NeoHookeDensity<dim,ValueType> >(materialParameters);
if (parameterSet.get<std::string>("energy") == "hencky")
- elasticDensity = std::make_shared<Elasticity::HenckyDensity<dim,ValueType>>(materialParameters);
+ elasticDensity = std::make_shared<Elasticity::HenckyDensity<dim,ValueType> >(materialParameters);
if (parameterSet.get<std::string>("energy") == "exphencky")
- elasticDensity = std::make_shared<Elasticity::ExpHenckyDensity<dim,ValueType>>(materialParameters);
+ elasticDensity = std::make_shared<Elasticity::ExpHenckyDensity<dim,ValueType> >(materialParameters);
if (parameterSet.get<std::string>("energy") == "mooneyrivlin")
- elasticDensity = std::make_shared<Elasticity::MooneyRivlinDensity<dim,ValueType>>(materialParameters);
+ elasticDensity = std::make_shared<Elasticity::MooneyRivlinDensity<dim,ValueType> >(materialParameters);
if(!elasticDensity)
DUNE_THROW(Exception, "Error: Selected energy not available!");
- auto elasticEnergy = std::make_shared<GFE::LocalIntegralEnergy<CompositeBasis, RealTuple<ValueType,targetDim>, Rotation<ValueType,dim>>>(elasticDensity);
- auto neumannEnergy = std::make_shared<GFE::NeumannEnergy<CompositeBasis, RealTuple<ValueType,targetDim>, Rotation<ValueType,dim>>>(neumannBoundary,*neumannFunctionPtr);
+ auto elasticEnergy = std::make_shared<GFE::LocalIntegralEnergy<CompositeBasis, RealTuple<ValueType,targetDim>, Rotation<ValueType,dim> > >(elasticDensity);
+ auto neumannEnergy = std::make_shared<GFE::NeumannEnergy<CompositeBasis, RealTuple<ValueType,targetDim>, Rotation<ValueType,dim> > >(neumannBoundary,*neumannFunctionPtr);
auto surfaceCosseratEnergy = std::make_shared<GFE::SurfaceCosseratEnergy<
- decltype(stressFreeShellFunction), CompositeBasis, RealTuple<ValueType,dim>, Rotation<ValueType,dim> >>(
- materialParameters,
- &surfaceShellBoundary,
- stressFreeShellFunction,
- fThickness,
- fLame);
-
- GFE::SumEnergy<CompositeBasis, RealTuple<ValueType,targetDim>, Rotation<ValueType,targetDim>> sumEnergy;
+ decltype(stressFreeShellFunction), CompositeBasis, RealTuple<ValueType,dim>, Rotation<ValueType,dim> > >(
+ materialParameters,
+ &surfaceShellBoundary,
+ stressFreeShellFunction,
+ fThickness,
+ fLame);
+
+ GFE::SumEnergy<CompositeBasis, RealTuple<ValueType,targetDim>, Rotation<ValueType,targetDim> > sumEnergy;
sumEnergy.addLocalEnergy(neumannEnergy);
sumEnergy.addLocalEnergy(elasticEnergy);
sumEnergy.addLocalEnergy(surfaceCosseratEnergy);
MixedLocalGFEADOLCStiffness<CompositeBasis,
- RealTuple<double,dim>,
- Rotation<double,dim> > localGFEADOLCStiffness(&sumEnergy);
+ RealTuple<double,dim>,
+ Rotation<double,dim> > localGFEADOLCStiffness(&sumEnergy);
MixedGFEAssembler<CompositeBasis,
- RealTuple<double,dim>,
- Rotation<double,dim> > mixedAssembler(compositeBasis, &localGFEADOLCStiffness);
+ RealTuple<double,dim>,
+ Rotation<double,dim> > mixedAssembler(compositeBasis, &localGFEADOLCStiffness);
////////////////////////////////////////////////////////
// Set Dirichlet values
@@ -573,7 +579,7 @@ int main (int argc, char *argv[]) try
for (int j = dim; j < RBM::TangentVector::dimension; j ++)
dirichletDofsRBM[i][j] = dirichletDofs[_1][i][j-dim];
}
- typedef Dune::GFE::GeodesicFEAssemblerWrapper<CompositeBasis, DeformationFEBasis, RBM, RealTuple<double, dim>, Rotation<double,dim>> GFEAssemblerWrapper;
+ typedef Dune::GFE::GeodesicFEAssemblerWrapper<CompositeBasis, DeformationFEBasis, RBM, RealTuple<double, dim>, Rotation<double,dim> > GFEAssemblerWrapper;
GFEAssemblerWrapper assembler(&mixedAssembler, deformationFEBasis);
#endif
@@ -583,7 +589,7 @@ int main (int argc, char *argv[]) try
if (parameterSet.get<std::string>("solvertype", "trustRegion") == "trustRegion") {
#if MIXED_SPACE
- MixedRiemannianTrustRegionSolver<GridType, CompositeBasis, DeformationFEBasis, RealTuple<double,dim>, OrientationFEBasis, Rotation<double,dim>> solver;
+ MixedRiemannianTrustRegionSolver<GridType, CompositeBasis, DeformationFEBasis, RealTuple<double,dim>, OrientationFEBasis, Rotation<double,dim> > solver;
solver.setup(*grid,
&mixedAssembler,
deformationFEBasis,
@@ -633,7 +639,7 @@ int main (int argc, char *argv[]) try
} else { //parameterSet.get<std::string>("solvertype") == "proximalNewton"
#if MIXED_SPACE
- DUNE_THROW(Exception, "Error: There is no MixedRiemannianProximalNewtonSolver!");
+ DUNE_THROW(Exception, "Error: There is no MixedRiemannianProximalNewtonSolver!");
#else
RiemannianProximalNewtonSolver<DeformationFEBasis, RBM, GFEAssemblerWrapper> solver;
solver.setup(*grid,
@@ -663,12 +669,12 @@ int main (int argc, char *argv[]) try
// Compute the displacement
for (int i = 0; i < compositeBasis.size({0}); i++) {
- for (int j = 0; j < dim; j++) {
+ for (int j = 0; j < dim; j++) {
displacement[i][j] = x[_0][i][j];
}
displacement[i] -= identity[i];
}
- auto displacementFunction = Dune::Functions::makeDiscreteGlobalBasisFunction<FieldVector<double,dim>>(deformationPowerBasis, displacement);
+ auto displacementFunction = Dune::Functions::makeDiscreteGlobalBasisFunction<FieldVector<double,dim> >(deformationPowerBasis, displacement);
// We need to subsample, because VTK cannot natively display real second-order functions
SubsamplingVTKWriter<GridView> vtkWriter(gridView, Dune::refinementLevels(displacementOrder-1));
@@ -688,27 +694,29 @@ int main (int argc, char *argv[]) try
std::string pathToOutput = parameterSet.hasKey("pathToOutput") ? parameterSet.get<std::string>("pathToOutput") : "./";
std::string deformationOutput = parameterSet.hasKey("deformationOutput") ? parameterSet.get<std::string>("deformationOutput") : "deformation";
std::string rotationOutput = parameterSet.hasKey("rotationOutput") ? parameterSet.get<std::string>("rotationOutput") : "rotation";
-
+
deformationOutput = pathToOutput + deformationOutput;
rotationOutput = pathToOutput + rotationOutput;
file.open(deformationOutput + ending);
- for (int i = 0; i < identity.size(); i++){
+ for (int i = 0; i < identity.size(); i++) {
file << identity[i] << ":" << displacement[i] << "\n";
}
file.close();
-
+
BlockVector<FieldVector<double,dim> > identityRotation(orientationFEBasis.size());
auto identityRotationPowerBasis = makeBasis(
gridView,
power<dim>(
- lagrange<rotationOrder>()
- ));
- Dune::Functions::interpolate(identityRotationPowerBasis, identityRotation, [](FieldVector<double,dim> x){ return x; });
+ lagrange<rotationOrder>()
+ ));
+ Dune::Functions::interpolate(identityRotationPowerBasis, identityRotation, [](FieldVector<double,dim> x){
+ return x;
+ });
file.open(rotationOutput + ending);
- for (int i = 0; i < identityRotation.size(); i++){
+ for (int i = 0; i < identityRotation.size(); i++) {
file << identityRotation[i] << ":" << x[_1][i] << "\n";
}
@@ -740,6 +748,7 @@ int main (int argc, char *argv[]) try
file.close();
}
-} catch (Exception& e) {
- std::cout << e.what() << std::endl;
+}
+catch (Exception& e) {
+ std::cout << e.what() << std::endl;
}
diff --git a/src/gradient-flow.cc b/src/gradient-flow.cc
index 6ffe0055..3979f517 100644
--- a/src/gradient-flow.cc
+++ b/src/gradient-flow.cc
@@ -77,9 +77,9 @@ int main (int argc, char *argv[]) try
//feenableexcept(FE_INVALID);
Python::runStream()
- << std::endl << "import sys"
- << std::endl << "sys.path.append('../../problems/')"
- << std::endl;
+ << std::endl << "import sys"
+ << std::endl << "sys.path.append('../../problems/')"
+ << std::endl;
typedef std::vector<TargetSpace> SolutionType;
@@ -184,7 +184,7 @@ int main (int argc, char *argv[]) try
power<TargetSpace::CoordinateType::dimension>(
lagrange<order>(),
blockedInterleaved()
- ));
+ ));
Functions::interpolate(powerBasis, v, pythonInitialIterate);
diff --git a/src/harmonicmaps.cc b/src/harmonicmaps.cc
index 8a45a3a8..4033c842 100644
--- a/src/harmonicmaps.cc
+++ b/src/harmonicmaps.cc
@@ -119,234 +119,234 @@ void fillVTKWriter(Writer& vtkWriter, const Basis& feBasis, const SolutionType&
int main (int argc, char *argv[])
{
- MPIHelper::instance(argc, argv);
-
- //feenableexcept(FE_INVALID);
- // Start Python interpreter
- Python::start();
- Python::Reference main = Python::import("__main__");
- Python::run("import math");
-
- //feenableexcept(FE_INVALID);
- Python::runStream()
- << std::endl << "import sys"
- << std::endl << "import os"
- << std::endl << "sys.path.append(os.getcwd() + '/../../problems/')"
- << std::endl;
-
-
- typedef std::vector<TargetSpace> SolutionType;
-
- // parse data file
- ParameterTree parameterSet;
- if (argc < 2)
- DUNE_THROW(Exception, "Usage: ./harmonicmaps <parameter file>");
-
- ParameterTreeParser::readINITree(argv[1], parameterSet);
-
- ParameterTreeParser::readOptions(argc, argv, parameterSet);
-
- // read problem settings
- const int numLevels = parameterSet.get<int>("numLevels");
-
- // read solver settings
- const double tolerance = parameterSet.get<double>("tolerance");
- const int maxTrustRegionSteps = parameterSet.get<int>("maxTrustRegionSteps");
- const double initialTrustRegionRadius = parameterSet.get<double>("initialTrustRegionRadius");
- const int multigridIterations = parameterSet.get<int>("numIt");
- const int nu1 = parameterSet.get<int>("nu1");
- const int nu2 = parameterSet.get<int>("nu2");
- const int mu = parameterSet.get<int>("mu");
- const int baseIterations = parameterSet.get<int>("baseIt");
- const double mgTolerance = parameterSet.get<double>("mgTolerance");
- const double baseTolerance = parameterSet.get<double>("baseTolerance");
- std::string resultPath = parameterSet.get("resultPath", "");
-
- // ///////////////////////////////////////
- // Create the grid
- // ///////////////////////////////////////
+ MPIHelper::instance(argc, argv);
+
+ //feenableexcept(FE_INVALID);
+ // Start Python interpreter
+ Python::start();
+ Python::Reference main = Python::import("__main__");
+ Python::run("import math");
+
+ //feenableexcept(FE_INVALID);
+ Python::runStream()
+ << std::endl << "import sys"
+ << std::endl << "import os"
+ << std::endl << "sys.path.append(os.getcwd() + '/../../problems/')"
+ << std::endl;
+
+
+ typedef std::vector<TargetSpace> SolutionType;
+
+ // parse data file
+ ParameterTree parameterSet;
+ if (argc < 2)
+ DUNE_THROW(Exception, "Usage: ./harmonicmaps <parameter file>");
+
+ ParameterTreeParser::readINITree(argv[1], parameterSet);
+
+ ParameterTreeParser::readOptions(argc, argv, parameterSet);
+
+ // read problem settings
+ const int numLevels = parameterSet.get<int>("numLevels");
+
+ // read solver settings
+ const double tolerance = parameterSet.get<double>("tolerance");
+ const int maxTrustRegionSteps = parameterSet.get<int>("maxTrustRegionSteps");
+ const double initialTrustRegionRadius = parameterSet.get<double>("initialTrustRegionRadius");
+ const int multigridIterations = parameterSet.get<int>("numIt");
+ const int nu1 = parameterSet.get<int>("nu1");
+ const int nu2 = parameterSet.get<int>("nu2");
+ const int mu = parameterSet.get<int>("mu");
+ const int baseIterations = parameterSet.get<int>("baseIt");
+ const double mgTolerance = parameterSet.get<double>("mgTolerance");
+ const double baseTolerance = parameterSet.get<double>("baseTolerance");
+ std::string resultPath = parameterSet.get("resultPath", "");
+
+ // ///////////////////////////////////////
+ // Create the grid
+ // ///////////////////////////////////////
#if HAVE_DUNE_FOAMGRID
- typedef std::conditional<dim==1 or dim!=dimworld,FoamGrid<dim,dimworld>,UGGrid<dim> >::type GridType;
+ typedef std::conditional<dim==1 or dim!=dimworld,FoamGrid<dim,dimworld>,UGGrid<dim> >::type GridType;
#else
- static_assert(dim==dimworld, "You need to have dune-foamgrid installed for dim != dimworld!");
- typedef std::conditional<dim==1,OneDGrid,UGGrid<dim> >::type GridType;
+ static_assert(dim==dimworld, "You need to have dune-foamgrid installed for dim != dimworld!");
+ typedef std::conditional<dim==1,OneDGrid,UGGrid<dim> >::type GridType;
#endif
- std::shared_ptr<GridType> grid;
- FieldVector<double,dimworld> lower(0), upper(1);
- std::array<unsigned int,dim> elements;
+ std::shared_ptr<GridType> grid;
+ FieldVector<double,dimworld> lower(0), upper(1);
+ std::array<unsigned int,dim> elements;
- std::string structuredGridType = parameterSet["structuredGrid"];
- if (structuredGridType != "false" ) {
+ std::string structuredGridType = parameterSet["structuredGrid"];
+ if (structuredGridType != "false" ) {
- lower = parameterSet.get<FieldVector<double,dimworld> >("lower");
- upper = parameterSet.get<FieldVector<double,dimworld> >("upper");
+ lower = parameterSet.get<FieldVector<double,dimworld> >("lower");
+ upper = parameterSet.get<FieldVector<double,dimworld> >("upper");
- elements = parameterSet.get<std::array<unsigned int,dim> >("elements");
- if (structuredGridType == "simplex")
- grid = StructuredGridFactory<GridType>::createSimplexGrid(lower, upper, elements);
- else if (structuredGridType == "cube")
- grid = StructuredGridFactory<GridType>::createCubeGrid(lower, upper, elements);
- else
- DUNE_THROW(Exception, "Unknown structured grid type '" << structuredGridType << "' found!");
+ elements = parameterSet.get<std::array<unsigned int,dim> >("elements");
+ if (structuredGridType == "simplex")
+ grid = StructuredGridFactory<GridType>::createSimplexGrid(lower, upper, elements);
+ else if (structuredGridType == "cube")
+ grid = StructuredGridFactory<GridType>::createCubeGrid(lower, upper, elements);
+ else
+ DUNE_THROW(Exception, "Unknown structured grid type '" << structuredGridType << "' found!");
- } else {
+ } else {
- std::string path = parameterSet.get<std::string>("path");
- std::string gridFile = parameterSet.get<std::string>("gridFile");
+ std::string path = parameterSet.get<std::string>("path");
+ std::string gridFile = parameterSet.get<std::string>("gridFile");
- grid = std::shared_ptr<GridType>(GmshReader<GridType>::read(path + "/" + gridFile));
- }
+ grid = std::shared_ptr<GridType>(GmshReader<GridType>::read(path + "/" + gridFile));
+ }
- grid->globalRefine(numLevels-1);
+ grid->globalRefine(numLevels-1);
- //////////////////////////////////////////////////////////////////////////////////
- // Construct the scalar function space basis corresponding to the GFE space
- //////////////////////////////////////////////////////////////////////////////////
+ //////////////////////////////////////////////////////////////////////////////////
+ // Construct the scalar function space basis corresponding to the GFE space
+ //////////////////////////////////////////////////////////////////////////////////
- using GridView = GridType::LeafGridView;
- GridView gridView = grid->leafGridView();
+ using GridView = GridType::LeafGridView;
+ GridView gridView = grid->leafGridView();
- typedef Dune::Functions::LagrangeBasis<GridView, order> FEBasis;
- FEBasis feBasis(gridView);
- SolutionType x(feBasis.size());
+ typedef Dune::Functions::LagrangeBasis<GridView, order> FEBasis;
+ FEBasis feBasis(gridView);
+ SolutionType x(feBasis.size());
- // /////////////////////////////////////////
- // Read Dirichlet values
- // /////////////////////////////////////////
- BitSetVector<1> dirichletVertices(gridView.size(dim), false);
- const GridView::IndexSet& indexSet = gridView.indexSet();
+ // /////////////////////////////////////////
+ // Read Dirichlet values
+ // /////////////////////////////////////////
+ BitSetVector<1> dirichletVertices(gridView.size(dim), false);
+ const GridView::IndexSet& indexSet = gridView.indexSet();
- // Make Python function that computes which vertices are on the Dirichlet boundary,
- // based on the vertex positions.
- std::string lambda = std::string("lambda x: (") + parameterSet.get<std::string>("dirichletVerticesPredicate") + std::string(")");
- auto pythonDirichletVertices = Python::make_function<bool>(Python::evaluate(lambda));
+ // Make Python function that computes which vertices are on the Dirichlet boundary,
+ // based on the vertex positions.
+ std::string lambda = std::string("lambda x: (") + parameterSet.get<std::string>("dirichletVerticesPredicate") + std::string(")");
+ auto pythonDirichletVertices = Python::make_function<bool>(Python::evaluate(lambda));
- for (auto&& vertex : vertices(gridView))
- {
- bool isDirichlet = pythonDirichletVertices(vertex.geometry().corner(0));
- dirichletVertices[indexSet.index(vertex)] = isDirichlet;
- }
+ for (auto&& vertex : vertices(gridView))
+ {
+ bool isDirichlet = pythonDirichletVertices(vertex.geometry().corner(0));
+ dirichletVertices[indexSet.index(vertex)] = isDirichlet;
+ }
- BoundaryPatch<GridView> dirichletBoundary(gridView, dirichletVertices);
+ BoundaryPatch<GridView> dirichletBoundary(gridView, dirichletVertices);
- BitSetVector<blocksize> dirichletNodes(feBasis.size(), false);
+ BitSetVector<blocksize> dirichletNodes(feBasis.size(), false);
- constructBoundaryDofs(dirichletBoundary,feBasis,dirichletNodes);
+ constructBoundaryDofs(dirichletBoundary,feBasis,dirichletNodes);
- // //////////////////////////
- // Initial iterate
- // //////////////////////////
+ // //////////////////////////
+ // Initial iterate
+ // //////////////////////////
- // Read initial iterate into a Python function
- Python::Module module = Python::import(parameterSet.get<std::string>("initialIterate"));
- auto pythonInitialIterate = Python::makeFunction<TargetSpace::CoordinateType(const FieldVector<double,dimworld>&)>(module.get("f"));
+ // Read initial iterate into a Python function
+ Python::Module module = Python::import(parameterSet.get<std::string>("initialIterate"));
+ auto pythonInitialIterate = Python::makeFunction<TargetSpace::CoordinateType(const FieldVector<double,dimworld>&)>(module.get("f"));
- std::vector<TargetSpace::CoordinateType> v;
- using namespace Functions::BasisFactory;
+ std::vector<TargetSpace::CoordinateType> v;
+ using namespace Functions::BasisFactory;
- auto powerBasis = makeBasis(
- gridView,
- power<TargetSpace::CoordinateType::dimension>(
- lagrange<order>(),
- blockedInterleaved()
+ auto powerBasis = makeBasis(
+ gridView,
+ power<TargetSpace::CoordinateType::dimension>(
+ lagrange<order>(),
+ blockedInterleaved()
));
- Dune::Functions::interpolate(powerBasis, v, pythonInitialIterate);
+ Dune::Functions::interpolate(powerBasis, v, pythonInitialIterate);
- for (size_t i=0; i<x.size(); i++)
- x[i] = v[i];
+ for (size_t i=0; i<x.size(); i++)
+ x[i] = v[i];
- // backup for error measurement later
- SolutionType initialIterate = x;
+ // backup for error measurement later
+ SolutionType initialIterate = x;
- // ////////////////////////////////////////////////////////////
- // Create an assembler for the Harmonic Energy Functional
- // ////////////////////////////////////////////////////////////
+ // ////////////////////////////////////////////////////////////
+ // Create an assembler for the Harmonic Energy Functional
+ // ////////////////////////////////////////////////////////////
- typedef TargetSpace::rebind<adouble>::other ATargetSpace;
- using GeodesicInterpolationRule = LocalGeodesicFEFunction<dim, double, FEBasis::LocalView::Tree::FiniteElement, ATargetSpace>;
- using ProjectedInterpolationRule = GFE::LocalProjectedFEFunction<dim, double, FEBasis::LocalView::Tree::FiniteElement, ATargetSpace>;
+ typedef TargetSpace::rebind<adouble>::other ATargetSpace;
+ using GeodesicInterpolationRule = LocalGeodesicFEFunction<dim, double, FEBasis::LocalView::Tree::FiniteElement, ATargetSpace>;
+ using ProjectedInterpolationRule = GFE::LocalProjectedFEFunction<dim, double, FEBasis::LocalView::Tree::FiniteElement, ATargetSpace>;
- // Assembler using ADOL-C
- std::shared_ptr<GFE::LocalEnergy<FEBasis,ATargetSpace> > localEnergy;
+ // Assembler using ADOL-C
+ std::shared_ptr<GFE::LocalEnergy<FEBasis,ATargetSpace> > localEnergy;
- std::string energy = parameterSet.get<std::string>("energy");
- if (energy == "harmonic")
- {
- if (parameterSet["interpolationMethod"] == "geodesic")
- localEnergy.reset(new HarmonicEnergy<FEBasis, GeodesicInterpolationRule, ATargetSpace>);
- else if (parameterSet["interpolationMethod"] == "projected")
- localEnergy.reset(new HarmonicEnergy<FEBasis, ProjectedInterpolationRule, ATargetSpace>);
- else
- DUNE_THROW(Exception, "Unknown interpolation method " << parameterSet["interpolationMethod"] << " requested!");
-
- } else if (energy == "chiral_skyrmion")
- {
-// // Doesn't work: we are not inside of a template
-// if constexpr (std::is_same<TargetSpace, UnitVector<double,3> >::value)
-// {
- if (parameterSet["interpolationMethod"] == "geodesic")
- localEnergy.reset(new GFE::ChiralSkyrmionEnergy<FEBasis, GeodesicInterpolationRule, adouble>(parameterSet.sub("energyParameters")));
- else if (parameterSet["interpolationMethod"] == "projected")
- localEnergy.reset(new GFE::ChiralSkyrmionEnergy<FEBasis, ProjectedInterpolationRule, adouble>(parameterSet.sub("energyParameters")));
- else
- DUNE_THROW(Exception, "Unknown interpolation method " << parameterSet["interpolationMethod"] << " requested!");
-// } else
-// DUNE_THROW(Exception, "Build program with TargetSpace = UnitVector<3> for the ChiralSkyrmion energy!");
-
- } else
- DUNE_THROW(Exception, "Unknown energy type '" << energy << "'");
-
- LocalGeodesicFEADOLCStiffness<FEBasis,TargetSpace> localGFEADOLCStiffness(localEnergy.get());
-
- GeodesicFEAssembler<FEBasis,TargetSpace> assembler(feBasis, localGFEADOLCStiffness);
-
- // /////////////////////////////////////////////////
- // Create a Riemannian trust-region solver
- // /////////////////////////////////////////////////
-
- RiemannianTrustRegionSolver<FEBasis,TargetSpace> solver;
- solver.setup(*grid,
- &assembler,
- x,
- dirichletNodes,
- tolerance,
- maxTrustRegionSteps,
- initialTrustRegionRadius,
- multigridIterations,
- mgTolerance,
- mu, nu1, nu2,
- baseIterations,
- baseTolerance,
- false); // instrumented
-
- // /////////////////////////////////////////////////////
- // Solve!
- // /////////////////////////////////////////////////////
-
- solver.setInitialIterate(x);
- solver.solve();
-
- x = solver.getSol();
-
- // //////////////////////////////
- // Output result
- // //////////////////////////////
-
- SubsamplingVTKWriter<GridView> vtkWriter(gridView,Dune::refinementLevels(order-1));
- std::string baseName = "harmonicmaps-result-" + std::to_string(order) + "-" + std::to_string(numLevels);
- fillVTKWriter(vtkWriter, feBasis, x, resultPath + baseName);
-
- // Write the corresponding coefficient vector: verbatim in binary, to be completely lossless
- typedef BlockVector<TargetSpace::CoordinateType> EmbeddedVectorType;
- EmbeddedVectorType xEmbedded(x.size());
- for (size_t i=0; i<x.size(); i++)
- xEmbedded[i] = x[i].globalCoordinates();
+ std::string energy = parameterSet.get<std::string>("energy");
+ if (energy == "harmonic")
+ {
+ if (parameterSet["interpolationMethod"] == "geodesic")
+ localEnergy.reset(new HarmonicEnergy<FEBasis, GeodesicInterpolationRule, ATargetSpace>);
+ else if (parameterSet["interpolationMethod"] == "projected")
+ localEnergy.reset(new HarmonicEnergy<FEBasis, ProjectedInterpolationRule, ATargetSpace>);
+ else
+ DUNE_THROW(Exception, "Unknown interpolation method " << parameterSet["interpolationMethod"] << " requested!");
+
+ } else if (energy == "chiral_skyrmion")
+ {
+ // // Doesn't work: we are not inside of a template
+ // if constexpr (std::is_same<TargetSpace, UnitVector<double,3> >::value)
+ // {
+ if (parameterSet["interpolationMethod"] == "geodesic")
+ localEnergy.reset(new GFE::ChiralSkyrmionEnergy<FEBasis, GeodesicInterpolationRule, adouble>(parameterSet.sub("energyParameters")));
+ else if (parameterSet["interpolationMethod"] == "projected")
+ localEnergy.reset(new GFE::ChiralSkyrmionEnergy<FEBasis, ProjectedInterpolationRule, adouble>(parameterSet.sub("energyParameters")));
+ else
+ DUNE_THROW(Exception, "Unknown interpolation method " << parameterSet["interpolationMethod"] << " requested!");
+ // } else
+ // DUNE_THROW(Exception, "Build program with TargetSpace = UnitVector<3> for the ChiralSkyrmion energy!");
+
+ } else
+ DUNE_THROW(Exception, "Unknown energy type '" << energy << "'");
+
+ LocalGeodesicFEADOLCStiffness<FEBasis,TargetSpace> localGFEADOLCStiffness(localEnergy.get());
+
+ GeodesicFEAssembler<FEBasis,TargetSpace> assembler(feBasis, localGFEADOLCStiffness);
+
+ // /////////////////////////////////////////////////
+ // Create a Riemannian trust-region solver
+ // /////////////////////////////////////////////////
+
+ RiemannianTrustRegionSolver<FEBasis,TargetSpace> solver;
+ solver.setup(*grid,
+ &assembler,
+ x,
+ dirichletNodes,
+ tolerance,
+ maxTrustRegionSteps,
+ initialTrustRegionRadius,
+ multigridIterations,
+ mgTolerance,
+ mu, nu1, nu2,
+ baseIterations,
+ baseTolerance,
+ false); // instrumented
+
+ // /////////////////////////////////////////////////////
+ // Solve!
+ // /////////////////////////////////////////////////////
+
+ solver.setInitialIterate(x);
+ solver.solve();
+
+ x = solver.getSol();
+
+ // //////////////////////////////
+ // Output result
+ // //////////////////////////////
+
+ SubsamplingVTKWriter<GridView> vtkWriter(gridView,Dune::refinementLevels(order-1));
+ std::string baseName = "harmonicmaps-result-" + std::to_string(order) + "-" + std::to_string(numLevels);
+ fillVTKWriter(vtkWriter, feBasis, x, resultPath + baseName);
+
+ // Write the corresponding coefficient vector: verbatim in binary, to be completely lossless
+ typedef BlockVector<TargetSpace::CoordinateType> EmbeddedVectorType;
+ EmbeddedVectorType xEmbedded(x.size());
+ for (size_t i=0; i<x.size(); i++)
+ xEmbedded[i] = x[i].globalCoordinates();
- std::ofstream outFile(baseName + ".data", std::ios_base::binary);
- MatrixVector::Generic::writeBinary(outFile, xEmbedded);
- outFile.close();
+ std::ofstream outFile(baseName + ".data", std::ios_base::binary);
+ MatrixVector::Generic::writeBinary(outFile, xEmbedded);
+ outFile.close();
- return 0;
- }
+ return 0;
+}
diff --git a/src/rod3d.cc b/src/rod3d.cc
index f1009140..d934c906 100644
--- a/src/rod3d.cc
+++ b/src/rod3d.cc
@@ -52,241 +52,246 @@ using namespace Dune;
int main (int argc, char *argv[]) try
{
- MPIHelper::instance(argc, argv);
-
- // parse data file
- ParameterTree parameterSet;
- if (argc < 2)
- DUNE_THROW(Exception, "Usage: ./rod3d <parameter file>");
-
- ParameterTreeParser::readINITree(argv[1], parameterSet);
-
- ParameterTreeParser::readOptions(argc, argv, parameterSet);
-
- // read solver settings
- const int numLevels = parameterSet.get<int>("numLevels");
- const double tolerance = parameterSet.get<double>("tolerance");
- const int maxTrustRegionSteps = parameterSet.get<int>("maxTrustRegionSteps");
- const double initialTrustRegionRadius = parameterSet.get<double>("initialTrustRegionRadius");
- const int multigridIterations = parameterSet.get<int>("numIt");
- const int nu1 = parameterSet.get<int>("nu1");
- const int nu2 = parameterSet.get<int>("nu2");
- const int mu = parameterSet.get<int>("mu");
- const int baseIterations = parameterSet.get<int>("baseIt");
- const double mgTolerance = parameterSet.get<double>("mgTolerance");
- const double baseTolerance = parameterSet.get<double>("baseTolerance");
- const bool instrumented = parameterSet.get<bool>("instrumented");
- std::string resultPath = parameterSet.get("resultPath", "");
-
- // read rod parameter settings
- const double A = parameterSet.get<double>("A");
- const double J1 = parameterSet.get<double>("J1");
- const double J2 = parameterSet.get<double>("J2");
- const double E = parameterSet.get<double>("E");
- const double nu = parameterSet.get<double>("nu");
- const int numRodBaseElements = parameterSet.get<int>("numRodBaseElements");
-
- // ///////////////////////////////////////
- // Create the grid
- // ///////////////////////////////////////
- typedef OneDGrid GridType;
- GridType grid(numRodBaseElements, 0, 1);
-
- grid.globalRefine(numLevels-1);
-
- using GridView = GridType::LeafGridView;
- GridView gridView = grid.leafGridView();
-
- //////////////////////////////////////////////
- // Create the stress-free configuration
- //////////////////////////////////////////////
-
- using ScalarBasis = Functions::LagrangeBasis<GridView,order>;
- ScalarBasis scalarBasis(gridView);
-
- std::vector<double> referenceConfigurationX(scalarBasis.size());
-
- auto identity = [](const FieldVector<double,1>& x) { return x; };
-
- Functions::interpolate(scalarBasis, referenceConfigurationX, identity);
-
- using Configuration = std::vector<RigidBodyMotion<double,3> >;
- Configuration referenceConfiguration(scalarBasis.size());
-
- for (std::size_t i=0; i<referenceConfiguration.size(); i++)
+ MPIHelper::instance(argc, argv);
+
+ // parse data file
+ ParameterTree parameterSet;
+ if (argc < 2)
+ DUNE_THROW(Exception, "Usage: ./rod3d <parameter file>");
+
+ ParameterTreeParser::readINITree(argv[1], parameterSet);
+
+ ParameterTreeParser::readOptions(argc, argv, parameterSet);
+
+ // read solver settings
+ const int numLevels = parameterSet.get<int>("numLevels");
+ const double tolerance = parameterSet.get<double>("tolerance");
+ const int maxTrustRegionSteps = parameterSet.get<int>("maxTrustRegionSteps");
+ const double initialTrustRegionRadius = parameterSet.get<double>("initialTrustRegionRadius");
+ const int multigridIterations = parameterSet.get<int>("numIt");
+ const int nu1 = parameterSet.get<int>("nu1");
+ const int nu2 = parameterSet.get<int>("nu2");
+ const int mu = parameterSet.get<int>("mu");
+ const int baseIterations = parameterSet.get<int>("baseIt");
+ const double mgTolerance = parameterSet.get<double>("mgTolerance");
+ const double baseTolerance = parameterSet.get<double>("baseTolerance");
+ const bool instrumented = parameterSet.get<bool>("instrumented");
+ std::string resultPath = parameterSet.get("resultPath", "");
+
+ // read rod parameter settings
+ const double A = parameterSet.get<double>("A");
+ const double J1 = parameterSet.get<double>("J1");
+ const double J2 = parameterSet.get<double>("J2");
+ const double E = parameterSet.get<double>("E");
+ const double nu = parameterSet.get<double>("nu");
+ const int numRodBaseElements = parameterSet.get<int>("numRodBaseElements");
+
+ // ///////////////////////////////////////
+ // Create the grid
+ // ///////////////////////////////////////
+ typedef OneDGrid GridType;
+ GridType grid(numRodBaseElements, 0, 1);
+
+ grid.globalRefine(numLevels-1);
+
+ using GridView = GridType::LeafGridView;
+ GridView gridView = grid.leafGridView();
+
+ //////////////////////////////////////////////
+ // Create the stress-free configuration
+ //////////////////////////////////////////////
+
+ using ScalarBasis = Functions::LagrangeBasis<GridView,order>;
+ ScalarBasis scalarBasis(gridView);
+
+ std::vector<double> referenceConfigurationX(scalarBasis.size());
+
+ auto identity = [](const FieldVector<double,1>& x) {
+ return x;
+ };
+
+ Functions::interpolate(scalarBasis, referenceConfigurationX, identity);
+
+ using Configuration = std::vector<RigidBodyMotion<double,3> >;
+ Configuration referenceConfiguration(scalarBasis.size());
+
+ for (std::size_t i=0; i<referenceConfiguration.size(); i++)
+ {
+ referenceConfiguration[i].r[0] = 0;
+ referenceConfiguration[i].r[1] = 0;
+ referenceConfiguration[i].r[2] = referenceConfigurationX[i];
+ referenceConfiguration[i].q = Rotation<double,3>::identity();
+ }
+
+ // Select the reference configuration as initial iterate
+
+ Configuration x = referenceConfiguration;
+
+ // /////////////////////////////////////////
+ // Read Dirichlet values
+ // /////////////////////////////////////////
+
+ // A basis for the tangent space
+ using namespace Functions::BasisFactory;
+
+ auto tangentBasis = makeBasis(
+ gridView,
+ power<TargetSpace::TangentVector::dimension>(
+ lagrange<order>(),
+ blockedInterleaved()
+ ));
+
+ // Find all boundary dofs
+ BoundaryPatch<GridView> dirichletBoundary(gridView,
+ true); // true: The entire boundary is Dirichlet boundary
+ BitSetVector<TargetSpace::TangentVector::dimension> dirichletNodes(tangentBasis.size(), false);
+ constructBoundaryDofs(dirichletBoundary,tangentBasis,dirichletNodes);
+
+ // Find the dof on the right boundary
+ std::size_t rightBoundaryDof;
+ for (std::size_t i=0; i<referenceConfigurationX.size(); i++)
+ if (std::fabs(referenceConfigurationX[i] - 1.0) < 1e-6)
{
- referenceConfiguration[i].r[0] = 0;
- referenceConfiguration[i].r[1] = 0;
- referenceConfiguration[i].r[2] = referenceConfigurationX[i];
- referenceConfiguration[i].q = Rotation<double,3>::identity();
+ rightBoundaryDof = i;
+ break;
}
- // Select the reference configuration as initial iterate
-
- Configuration x = referenceConfiguration;
-
- // /////////////////////////////////////////
- // Read Dirichlet values
- // /////////////////////////////////////////
-
- // A basis for the tangent space
- using namespace Functions::BasisFactory;
-
- auto tangentBasis = makeBasis(
- gridView,
- power<TargetSpace::TangentVector::dimension>(
- lagrange<order>(),
- blockedInterleaved()
- ));
-
- // Find all boundary dofs
- BoundaryPatch<GridView> dirichletBoundary(gridView,
- true); // true: The entire boundary is Dirichlet boundary
- BitSetVector<TargetSpace::TangentVector::dimension> dirichletNodes(tangentBasis.size(), false);
- constructBoundaryDofs(dirichletBoundary,tangentBasis,dirichletNodes);
-
- // Find the dof on the right boundary
- std::size_t rightBoundaryDof;
- for (std::size_t i=0; i<referenceConfigurationX.size(); i++)
- if (std::fabs(referenceConfigurationX[i] - 1.0) < 1e-6)
- {
- rightBoundaryDof = i;
- break;
- }
-
- // Set Dirichlet values
- x[rightBoundaryDof].r = parameterSet.get<FieldVector<double,3> >("dirichletValue");
-
- auto axis = parameterSet.get<FieldVector<double,3> >("dirichletAxis");
- double angle = parameterSet.get<double>("dirichletAngle");
-
- x[rightBoundaryDof].q = Rotation<double,3>(axis, M_PI*angle/180);
-
- // backup for error measurement later
- std::cout << "Right boundary orientation:" << std::endl;
- std::cout << "director 0: " << x[rightBoundaryDof].q.director(0) << std::endl;
- std::cout << "director 1: " << x[rightBoundaryDof].q.director(1) << std::endl;
- std::cout << "director 2: " << x[rightBoundaryDof].q.director(2) << std::endl;
-
- //////////////////////////////////////////////
- // Create the energy and assembler
- //////////////////////////////////////////////
-
- using ATargetSpace = TargetSpace::rebind<adouble>::other;
- using GeodesicInterpolationRule = LocalGeodesicFEFunction<1, double, ScalarBasis::LocalView::Tree::FiniteElement, ATargetSpace>;
- using ProjectedInterpolationRule = GFE::LocalProjectedFEFunction<1, double, ScalarBasis::LocalView::Tree::FiniteElement, ATargetSpace>;
-
- // Assembler using ADOL-C
- std::shared_ptr<GFE::LocalEnergy<ScalarBasis,ATargetSpace> > localRodEnergy;
-
- if (parameterSet["interpolationMethod"] == "geodesic")
- {
- auto energy = std::make_shared<GFE::CosseratRodEnergy<ScalarBasis, GeodesicInterpolationRule, adouble> >(gridView,
- A, J1, J2, E, nu);
- energy->setReferenceConfiguration(referenceConfiguration);
- localRodEnergy = energy;
- }
- else if (parameterSet["interpolationMethod"] == "projected")
- {
- auto energy = std::make_shared<GFE::CosseratRodEnergy<ScalarBasis, ProjectedInterpolationRule, adouble> >(gridView,
- A, J1, J2, E, nu);
- energy->setReferenceConfiguration(referenceConfiguration);
- localRodEnergy = energy;
- }
- else
- DUNE_THROW(Exception, "Unknown interpolation method " << parameterSet["interpolationMethod"] << " requested!");
-
- LocalGeodesicFEADOLCStiffness<ScalarBasis,
- TargetSpace> localStiffness(localRodEnergy.get());
-
- GeodesicFEAssembler<ScalarBasis,TargetSpace> rodAssembler(gridView, localStiffness);
-
- /////////////////////////////////////////////
- // Create a solver for the rod problem
- /////////////////////////////////////////////
-
- RiemannianTrustRegionSolver<ScalarBasis,RigidBodyMotion<double,3> > rodSolver;
-
- rodSolver.setup(grid,
- &rodAssembler,
- x,
- dirichletNodes,
- tolerance,
- maxTrustRegionSteps,
- initialTrustRegionRadius,
- multigridIterations,
- mgTolerance,
- mu, nu1, nu2,
- baseIterations,
- baseTolerance,
- instrumented);
-
- // /////////////////////////////////////////////////////
- // Solve!
- // /////////////////////////////////////////////////////
-
- std::cout << "Energy: " << rodAssembler.computeEnergy(x) << std::endl;
-
- rodSolver.setInitialIterate(x);
- rodSolver.solve();
-
- x = rodSolver.getSol();
-
- // //////////////////////////////
- // Output result
- // //////////////////////////////
+ // Set Dirichlet values
+ x[rightBoundaryDof].r = parameterSet.get<FieldVector<double,3> >("dirichletValue");
+
+ auto axis = parameterSet.get<FieldVector<double,3> >("dirichletAxis");
+ double angle = parameterSet.get<double>("dirichletAngle");
+
+ x[rightBoundaryDof].q = Rotation<double,3>(axis, M_PI*angle/180);
+
+ // backup for error measurement later
+ std::cout << "Right boundary orientation:" << std::endl;
+ std::cout << "director 0: " << x[rightBoundaryDof].q.director(0) << std::endl;
+ std::cout << "director 1: " << x[rightBoundaryDof].q.director(1) << std::endl;
+ std::cout << "director 2: " << x[rightBoundaryDof].q.director(2) << std::endl;
+
+ //////////////////////////////////////////////
+ // Create the energy and assembler
+ //////////////////////////////////////////////
+
+ using ATargetSpace = TargetSpace::rebind<adouble>::other;
+ using GeodesicInterpolationRule = LocalGeodesicFEFunction<1, double, ScalarBasis::LocalView::Tree::FiniteElement, ATargetSpace>;
+ using ProjectedInterpolationRule = GFE::LocalProjectedFEFunction<1, double, ScalarBasis::LocalView::Tree::FiniteElement, ATargetSpace>;
+
+ // Assembler using ADOL-C
+ std::shared_ptr<GFE::LocalEnergy<ScalarBasis,ATargetSpace> > localRodEnergy;
+
+ if (parameterSet["interpolationMethod"] == "geodesic")
+ {
+ auto energy = std::make_shared<GFE::CosseratRodEnergy<ScalarBasis, GeodesicInterpolationRule, adouble> >(gridView,
+ A, J1, J2, E, nu);
+ energy->setReferenceConfiguration(referenceConfiguration);
+ localRodEnergy = energy;
+ }
+ else if (parameterSet["interpolationMethod"] == "projected")
+ {
+ auto energy = std::make_shared<GFE::CosseratRodEnergy<ScalarBasis, ProjectedInterpolationRule, adouble> >(gridView,
+ A, J1, J2, E, nu);
+ energy->setReferenceConfiguration(referenceConfiguration);
+ localRodEnergy = energy;
+ }
+ else
+ DUNE_THROW(Exception, "Unknown interpolation method " << parameterSet["interpolationMethod"] << " requested!");
+
+ LocalGeodesicFEADOLCStiffness<ScalarBasis,
+ TargetSpace> localStiffness(localRodEnergy.get());
+
+ GeodesicFEAssembler<ScalarBasis,TargetSpace> rodAssembler(gridView, localStiffness);
+
+ /////////////////////////////////////////////
+ // Create a solver for the rod problem
+ /////////////////////////////////////////////
+
+ RiemannianTrustRegionSolver<ScalarBasis,RigidBodyMotion<double,3> > rodSolver;
+
+ rodSolver.setup(grid,
+ &rodAssembler,
+ x,
+ dirichletNodes,
+ tolerance,
+ maxTrustRegionSteps,
+ initialTrustRegionRadius,
+ multigridIterations,
+ mgTolerance,
+ mu, nu1, nu2,
+ baseIterations,
+ baseTolerance,
+ instrumented);
+
+ // /////////////////////////////////////////////////////
+ // Solve!
+ // /////////////////////////////////////////////////////
+
+ std::cout << "Energy: " << rodAssembler.computeEnergy(x) << std::endl;
+
+ rodSolver.setInitialIterate(x);
+ rodSolver.solve();
+
+ x = rodSolver.getSol();
+
+ // //////////////////////////////
+ // Output result
+ // //////////////////////////////
#if HAVE_DUNE_VTK
- using DataCollector = Vtk::LagrangeDataCollector<GridView,order>;
- DataCollector dataCollector(gridView);
- VtkUnstructuredGridWriter<GridView,DataCollector> vtkWriter(gridView, Vtk::FormatTypes::ASCII);
+ using DataCollector = Vtk::LagrangeDataCollector<GridView,order>;
+ DataCollector dataCollector(gridView);
+ VtkUnstructuredGridWriter<GridView,DataCollector> vtkWriter(gridView, Vtk::FormatTypes::ASCII);
- // Make basis for R^3-valued data
- using namespace Functions::BasisFactory;
+ // Make basis for R^3-valued data
+ using namespace Functions::BasisFactory;
- auto worldBasis = makeBasis(
- gridView,
- power<3>(lagrange<order>())
+ auto worldBasis = makeBasis(
+ gridView,
+ power<3>(lagrange<order>())
);
- // The rod displacement field
- BlockVector<FieldVector<double,3> > displacement(worldBasis.size());
- for (std::size_t i=0; i<x.size(); i++)
- displacement[i] = x[i].r;
+ // The rod displacement field
+ BlockVector<FieldVector<double,3> > displacement(worldBasis.size());
+ for (std::size_t i=0; i<x.size(); i++)
+ displacement[i] = x[i].r;
- std::vector<double> xEmbedding;
- Functions::interpolate(scalarBasis, xEmbedding, [](FieldVector<double,1> x){ return x; });
+ std::vector<double> xEmbedding;
+ Functions::interpolate(scalarBasis, xEmbedding, [](FieldVector<double,1> x){
+ return x;
+ });
- BlockVector<FieldVector<double,3> > gridEmbedding(xEmbedding.size());
- for (std::size_t i=0; i<gridEmbedding.size(); i++)
- gridEmbedding[i] = {xEmbedding[i], 0, 0};
+ BlockVector<FieldVector<double,3> > gridEmbedding(xEmbedding.size());
+ for (std::size_t i=0; i<gridEmbedding.size(); i++)
+ gridEmbedding[i] = {xEmbedding[i], 0, 0};
- displacement -= gridEmbedding;
+ displacement -= gridEmbedding;
- auto displacementFunction = Functions::makeDiscreteGlobalBasisFunction<FieldVector<double,3> >(worldBasis, displacement);
- vtkWriter.addPointData(displacementFunction, "displacement", 3);
+ auto displacementFunction = Functions::makeDiscreteGlobalBasisFunction<FieldVector<double,3> >(worldBasis, displacement);
+ vtkWriter.addPointData(displacementFunction, "displacement", 3);
- // The three director fields
- using FunctionType = decltype(displacementFunction);
- std::array<std::optional<FunctionType>, 3> directorFunction;
- std::array<BlockVector<FieldVector<double, 3> >, 3> director;
- for (int i=0; i<3; i++)
- {
- director[i].resize(worldBasis.size());
- for (std::size_t j=0; j<x.size(); j++)
- director[i][j] = x[j].q.director(i);
+ // The three director fields
+ using FunctionType = decltype(displacementFunction);
+ std::array<std::optional<FunctionType>, 3> directorFunction;
+ std::array<BlockVector<FieldVector<double, 3> >, 3> director;
+ for (int i=0; i<3; i++)
+ {
+ director[i].resize(worldBasis.size());
+ for (std::size_t j=0; j<x.size(); j++)
+ director[i][j] = x[j].q.director(i);
- directorFunction[i] = Functions::makeDiscreteGlobalBasisFunction<FieldVector<double,3> >(worldBasis, std::move(director[i]));
- vtkWriter.addPointData(*directorFunction[i], "director " + std::to_string(i), 3);
- }
+ directorFunction[i] = Functions::makeDiscreteGlobalBasisFunction<FieldVector<double,3> >(worldBasis, std::move(director[i]));
+ vtkWriter.addPointData(*directorFunction[i], "director " + std::to_string(i), 3);
+ }
- vtkWriter.write(resultPath + "rod3d-result");
+ vtkWriter.write(resultPath + "rod3d-result");
#else
- std::cout << "Falling back to legacy file writing. Get dune-vtk for better results" << std::endl;
- // Fall-back solution for users without dune-vtk
- CosseratVTKWriter<GridType>::write<ScalarBasis>(scalarBasis,x, resultPath + "rod3d-result");
+ std::cout << "Falling back to legacy file writing. Get dune-vtk for better results" << std::endl;
+ // Fall-back solution for users without dune-vtk
+ CosseratVTKWriter<GridType>::write<ScalarBasis>(scalarBasis,x, resultPath + "rod3d-result");
#endif
-} catch (Exception& e)
+}
+catch (Exception& e)
{
- std::cout << e.what() << std::endl;
+ std::cout << e.what() << std::endl;
}
diff --git a/src/rodobstacle.cc b/src/rodobstacle.cc
index d4b62e05..6267e6d2 100644
--- a/src/rodobstacle.cc
+++ b/src/rodobstacle.cc
@@ -32,321 +32,322 @@ void setTrustRegionObstacles(double trustRegionRadius,
const std::vector<BoxConstraint<double,blocksize> >& trueObstacles,
const BitSetVector<blocksize>& dirichletNodes)
{
- //std::cout << "True obstacles\n" << trueObstacles << std::endl;
+ //std::cout << "True obstacles\n" << trueObstacles << std::endl;
- for (int j=0; j<trustRegionObstacles.size(); j++) {
+ for (int j=0; j<trustRegionObstacles.size(); j++) {
- for (int k=0; k<blocksize; k++) {
+ for (int k=0; k<blocksize; k++) {
- if (dirichletNodes[j][k])
- continue;
+ if (dirichletNodes[j][k])
+ continue;
- trustRegionObstacles[j].lower(k) =
- (trueObstacles[j].lower(k) < -1e10)
+ trustRegionObstacles[j].lower(k) =
+ (trueObstacles[j].lower(k) < -1e10)
? std::min(-trustRegionRadius, trueObstacles[j].upper(k) - trustRegionRadius)
: trueObstacles[j].lower(k);
- trustRegionObstacles[j].upper(k) =
- (trueObstacles[j].upper(k) > 1e10)
+ trustRegionObstacles[j].upper(k) =
+ (trueObstacles[j].upper(k) > 1e10)
? std::max(trustRegionRadius,trueObstacles[j].lower(k) + trustRegionRadius)
: trueObstacles[j].upper(k);
- }
-
}
- //std::cout << "TrustRegion obstacles\n" << trustRegionObstacles << std::endl;
+ }
+
+ //std::cout << "TrustRegion obstacles\n" << trustRegionObstacles << std::endl;
}
bool refineCondition(const FieldVector<double,1>& pos) {
- return pos[2] > -2 && pos[2] < -0.5;
+ return pos[2] > -2 && pos[2] < -0.5;
}
bool refineAll(const FieldVector<double,1>& pos) {
- return true;
+ return true;
}
int main (int argc, char *argv[]) try
{
- // Some types that I need
- typedef BCRSMatrix<FieldMatrix<double, blocksize, blocksize> > MatrixType;
- typedef BlockVector<FieldVector<double, blocksize> > CorrectionType;
- typedef std::vector<RigidBodyMotion<double,2> > SolutionType;
-
- // parse data file
- ParameterTree parameterSet;
- ParameterTreeParser::readINITree("rodobstacle.parset", parameterSet);
-
- // read solver settings
- const int minLevel = parameterSet.get<int>("minLevel");
- const int maxLevel = parameterSet.get<int>("maxLevel");
- const int maxNewtonSteps = parameterSet.get<int>("maxNewtonSteps");
- const int numIt = parameterSet.get<int>("numIt");
- const int nu1 = parameterSet.get<int>("nu1");
- const int nu2 = parameterSet.get<int>("nu2");
- const int mu = parameterSet.get<int>("mu");
- const int baseIt = parameterSet.get<int>("baseIt");
- const double tolerance = parameterSet.get<double>("tolerance");
- const double baseTolerance = parameterSet.get<double>("baseTolerance");
-
- // Problem settings
- const int numRodBaseElements = parameterSet.get<int>("numRodBaseElements");
-
- // ///////////////////////////////////////
- // Create the two grids
- // ///////////////////////////////////////
- typedef OneDGrid GridType;
- GridType grid(numRodBaseElements, 0, numRodBaseElements);
-
- grid.globalRefine(minLevel);
-
- std::vector<std::vector<BoxConstraint<double,3> > > trustRegionObstacles(minLevel+1);
- std::vector<BitSetVector<3> > hasObstacle(minLevel+1);
- BitSetVector<blocksize> dirichletNodes;
-
- // ////////////////////////////////
- // Create a multigrid solver
- // ////////////////////////////////
-
- // First create a gauss-seidel base solver
- ProjectedBlockGSStep<MatrixType, CorrectionType> baseSolverStep;
-
- EnergyNorm<MatrixType, CorrectionType> baseEnergyNorm(baseSolverStep);
-
- LoopSolver<CorrectionType> baseSolver(&baseSolverStep,
- baseIt,
- baseTolerance,
- &baseEnergyNorm,
- Solver::QUIET);
-
- // Make pre and postsmoothers
- ProjectedBlockGSStep<MatrixType, CorrectionType> presmoother;
- ProjectedBlockGSStep<MatrixType, CorrectionType> postsmoother;
-
- MonotoneMGStep<MatrixType, CorrectionType> multigridStep;
-
- multigridStep.setMGType(mu, nu1, nu2);
- multigridStep.ignoreNodes_ = &dirichletNodes;
- multigridStep.basesolver_ = &baseSolver;
- multigridStep.hasObstacle_ = &hasObstacle;
- multigridStep.obstacles_ = &trustRegionObstacles;
- multigridStep.verbosity_ = Solver::QUIET;
- multigridStep.obstacleRestrictor_ = new MandelObstacleRestrictor<CorrectionType>;
-
-
- EnergyNorm<MatrixType, CorrectionType> energyNorm(multigridStep);
-
- LoopSolver<CorrectionType> solver(&multigridStep,
- numIt,
- tolerance,
- &energyNorm,
- Solver::FULL);
-
- double trustRegionRadius = 0.1;
-
- CorrectionType rhs;
- SolutionType x(grid.size(1));
- CorrectionType corr;
-
- // //////////////////////////
- // Initial solution
- // //////////////////////////
-
- for (int i=0; i<x.size(); i++) {
- x[i].r[0] = 0;
- x[i].r[1] = i;//double(i)/(x.size()-1);
- x[i].q = Rotation<double,2>::identity();
- }
+ // Some types that I need
+ typedef BCRSMatrix<FieldMatrix<double, blocksize, blocksize> > MatrixType;
+ typedef BlockVector<FieldVector<double, blocksize> > CorrectionType;
+ typedef std::vector<RigidBodyMotion<double,2> > SolutionType;
+
+ // parse data file
+ ParameterTree parameterSet;
+ ParameterTreeParser::readINITree("rodobstacle.parset", parameterSet);
- x.back().r[1] += 1;
+ // read solver settings
+ const int minLevel = parameterSet.get<int>("minLevel");
+ const int maxLevel = parameterSet.get<int>("maxLevel");
+ const int maxNewtonSteps = parameterSet.get<int>("maxNewtonSteps");
+ const int numIt = parameterSet.get<int>("numIt");
+ const int nu1 = parameterSet.get<int>("nu1");
+ const int nu2 = parameterSet.get<int>("nu2");
+ const int mu = parameterSet.get<int>("mu");
+ const int baseIt = parameterSet.get<int>("baseIt");
+ const double tolerance = parameterSet.get<double>("tolerance");
+ const double baseTolerance = parameterSet.get<double>("baseTolerance");
- // /////////////////////////////////////////////////////////////////////
- // Refinement Loop
- // /////////////////////////////////////////////////////////////////////
+ // Problem settings
+ const int numRodBaseElements = parameterSet.get<int>("numRodBaseElements");
- for (int toplevel=minLevel; toplevel<=maxLevel; toplevel++) {
+ // ///////////////////////////////////////
+ // Create the two grids
+ // ///////////////////////////////////////
+ typedef OneDGrid GridType;
+ GridType grid(numRodBaseElements, 0, numRodBaseElements);
- std::cout << "####################################################" << std::endl;
- std::cout << " Solving on level: " << toplevel << std::endl;
- std::cout << "####################################################" << std::endl;
+ grid.globalRefine(minLevel);
- dirichletNodes.resize( grid.size(1) );
- dirichletNodes.unsetAll();
+ std::vector<std::vector<BoxConstraint<double,3> > > trustRegionObstacles(minLevel+1);
+ std::vector<BitSetVector<3> > hasObstacle(minLevel+1);
+ BitSetVector<blocksize> dirichletNodes;
- dirichletNodes[0] = true;
- dirichletNodes.back() = true;
+ // ////////////////////////////////
+ // Create a multigrid solver
+ // ////////////////////////////////
- // ////////////////////////////////////////////////////////////
- // Create solution and rhs vectors
- // ////////////////////////////////////////////////////////////
+ // First create a gauss-seidel base solver
+ ProjectedBlockGSStep<MatrixType, CorrectionType> baseSolverStep;
+ EnergyNorm<MatrixType, CorrectionType> baseEnergyNorm(baseSolverStep);
- MatrixType hessianMatrix;
- RodAssembler<GridType::LeafGridView,2> rodAssembler(grid.leafGridView());
+ LoopSolver<CorrectionType> baseSolver(&baseSolverStep,
+ baseIt,
+ baseTolerance,
+ &baseEnergyNorm,
+ Solver::QUIET);
- rodAssembler.setParameters(1, 350000, 350000);
+ // Make pre and postsmoothers
+ ProjectedBlockGSStep<MatrixType, CorrectionType> presmoother;
+ ProjectedBlockGSStep<MatrixType, CorrectionType> postsmoother;
- MatrixIndexSet indices(grid.size(toplevel,1), grid.size(toplevel,1));
- rodAssembler.getNeighborsPerVertex(indices);
- indices.exportIdx(hessianMatrix);
+ MonotoneMGStep<MatrixType, CorrectionType> multigridStep;
- rhs.resize(grid.size(toplevel,1));
- corr.resize(grid.size(toplevel,1));
+ multigridStep.setMGType(mu, nu1, nu2);
+ multigridStep.ignoreNodes_ = &dirichletNodes;
+ multigridStep.basesolver_ = &baseSolver;
+ multigridStep.hasObstacle_ = &hasObstacle;
+ multigridStep.obstacles_ = &trustRegionObstacles;
+ multigridStep.verbosity_ = Solver::QUIET;
+ multigridStep.obstacleRestrictor_ = new MandelObstacleRestrictor<CorrectionType>;
- // //////////////////////////////////////////////////////////
- // Create obstacles
- // //////////////////////////////////////////////////////////
+ EnergyNorm<MatrixType, CorrectionType> energyNorm(multigridStep);
- hasObstacle.resize(toplevel+1);
- for (int i=0; i<hasObstacle.size(); i++) {
- hasObstacle[i].resize(grid.size(i, 1));
- hasObstacle[i].setAll();
- }
+ LoopSolver<CorrectionType> solver(&multigridStep,
+ numIt,
+ tolerance,
+ &energyNorm,
+ Solver::FULL);
- std::vector<std::vector<BoxConstraint<double,3> > > trueObstacles(toplevel+1);
- trustRegionObstacles.resize(toplevel+1);
+ double trustRegionRadius = 0.1;
- for (int i=0; i<toplevel+1; i++) {
- trueObstacles[i].resize(grid.size(i,1));
- trustRegionObstacles[i].resize(grid.size(i,1));
- }
+ CorrectionType rhs;
+ SolutionType x(grid.size(1));
+ CorrectionType corr;
- for (int i=0; i<trueObstacles[toplevel].size(); i++) {
- trueObstacles[toplevel][i].clear();
- //trueObstacles[toplevel][i].val[0] = - x[i][0];
- trueObstacles[toplevel][i].upper(0) = 0.1 - x[i].r[0];
- }
+ // //////////////////////////
+ // Initial solution
+ // //////////////////////////
+ for (int i=0; i<x.size(); i++) {
+ x[i].r[0] = 0;
+ x[i].r[1] = i; //double(i)/(x.size()-1);
+ x[i].q = Rotation<double,2>::identity();
+ }
- trustRegionObstacles.resize(toplevel+1);
- for (int i=0; i<=toplevel; i++)
- trustRegionObstacles[i].resize(grid.size(i, 1));
+ x.back().r[1] += 1;
- // ////////////////////////////////////////////
- // Adjust the solver to the new hierarchy
- // ////////////////////////////////////////////
+ // /////////////////////////////////////////////////////////////////////
+ // Refinement Loop
+ // /////////////////////////////////////////////////////////////////////
- multigridStep.setNumberOfLevels(toplevel+1);
- multigridStep.ignoreNodes_ = &dirichletNodes;
- multigridStep.setSmoother(&presmoother, &postsmoother);
+ for (int toplevel=minLevel; toplevel<=maxLevel; toplevel++) {
- for (int k=0; k<multigridStep.mgTransfer_.size(); k++)
- delete(multigridStep.mgTransfer_[k]);
+ std::cout << "####################################################" << std::endl;
+ std::cout << " Solving on level: " << toplevel << std::endl;
+ std::cout << "####################################################" << std::endl;
- multigridStep.mgTransfer_.resize(toplevel);
+ dirichletNodes.resize( grid.size(1) );
+ dirichletNodes.unsetAll();
- for (int i=0; i<multigridStep.mgTransfer_.size(); i++){
- TruncatedCompressedMGTransfer<CorrectionType>* newTransferOp = new TruncatedCompressedMGTransfer<CorrectionType>;
- newTransferOp->setup(grid,i,i+1);
- multigridStep.mgTransfer_[i] = newTransferOp;
- }
+ dirichletNodes[0] = true;
+ dirichletNodes.back() = true;
- // /////////////////////////////////////////////////////
- // Trust-Region Solver
- // /////////////////////////////////////////////////////
- for (int i=0; i<maxNewtonSteps; i++) {
+ // ////////////////////////////////////////////////////////////
+ // Create solution and rhs vectors
+ // ////////////////////////////////////////////////////////////
- std::cout << "-----------------------------------------------------------------------------" << std::endl;
- std::cout << " Trust-Region Step Number: " << i
- << ", radius: " << trustRegionRadius
- << ", energy: " << rodAssembler.computeEnergy(x) << std::endl;
- std::cout << "-----------------------------------------------------------------------------" << std::endl;
- rhs = 0;
- corr = 0;
+ MatrixType hessianMatrix;
+ RodAssembler<GridType::LeafGridView,2> rodAssembler(grid.leafGridView());
- rodAssembler.assembleGradient(x, rhs);
- rodAssembler.assembleMatrix(x, hessianMatrix);
+ rodAssembler.setParameters(1, 350000, 350000);
- rhs *= -1;
+ MatrixIndexSet indices(grid.size(toplevel,1), grid.size(toplevel,1));
+ rodAssembler.getNeighborsPerVertex(indices);
+ indices.exportIdx(hessianMatrix);
- // Create trust-region obstacle on grid0.maxLevel()
- setTrustRegionObstacles(trustRegionRadius,
- trustRegionObstacles[toplevel],
- trueObstacles[toplevel],
- dirichletNodes);
+ rhs.resize(grid.size(toplevel,1));
+ corr.resize(grid.size(toplevel,1));
- dynamic_cast<MultigridStep<MatrixType,CorrectionType>*>(solver.iterationStep_)->setProblem(hessianMatrix, corr, rhs, toplevel+1);
- solver.preprocess();
+ // //////////////////////////////////////////////////////////
+ // Create obstacles
+ // //////////////////////////////////////////////////////////
- multigridStep.preprocess();
+ hasObstacle.resize(toplevel+1);
+ for (int i=0; i<hasObstacle.size(); i++) {
+ hasObstacle[i].resize(grid.size(i, 1));
+ hasObstacle[i].setAll();
+ }
+
+ std::vector<std::vector<BoxConstraint<double,3> > > trueObstacles(toplevel+1);
+ trustRegionObstacles.resize(toplevel+1);
+ for (int i=0; i<toplevel+1; i++) {
+ trueObstacles[i].resize(grid.size(i,1));
+ trustRegionObstacles[i].resize(grid.size(i,1));
+ }
- // /////////////////////////////
- // Solve !
- // /////////////////////////////
- solver.solve();
+ for (int i=0; i<trueObstacles[toplevel].size(); i++) {
+ trueObstacles[toplevel][i].clear();
+ //trueObstacles[toplevel][i].val[0] = - x[i][0];
+ trueObstacles[toplevel][i].upper(0) = 0.1 - x[i].r[0];
+ }
- corr = multigridStep.getSol();
- printf("infinity norm of the correction: %g\n", corr.infinity_norm());
- if (corr.infinity_norm() < 1e-5) {
- std::cout << "CORRECTION IS SMALL ENOUGH" << std::endl;
- break;
- }
+ trustRegionObstacles.resize(toplevel+1);
+ for (int i=0; i<=toplevel; i++)
+ trustRegionObstacles[i].resize(grid.size(i, 1));
+
+ // ////////////////////////////////////////////
+ // Adjust the solver to the new hierarchy
+ // ////////////////////////////////////////////
+
+ multigridStep.setNumberOfLevels(toplevel+1);
+ multigridStep.ignoreNodes_ = &dirichletNodes;
+ multigridStep.setSmoother(&presmoother, &postsmoother);
+
+ for (int k=0; k<multigridStep.mgTransfer_.size(); k++)
+ delete(multigridStep.mgTransfer_[k]);
+
+ multigridStep.mgTransfer_.resize(toplevel);
+
+ for (int i=0; i<multigridStep.mgTransfer_.size(); i++) {
+ TruncatedCompressedMGTransfer<CorrectionType>* newTransferOp = new TruncatedCompressedMGTransfer<CorrectionType>;
+ newTransferOp->setup(grid,i,i+1);
+ multigridStep.mgTransfer_[i] = newTransferOp;
+ }
+
+ // /////////////////////////////////////////////////////
+ // Trust-Region Solver
+ // /////////////////////////////////////////////////////
+ for (int i=0; i<maxNewtonSteps; i++) {
- // ////////////////////////////////////////////////////
- // Check whether trust-region step can be accepted
- // ////////////////////////////////////////////////////
+ std::cout << "-----------------------------------------------------------------------------" << std::endl;
+ std::cout << " Trust-Region Step Number: " << i
+ << ", radius: " << trustRegionRadius
+ << ", energy: " << rodAssembler.computeEnergy(x) << std::endl;
+ std::cout << "-----------------------------------------------------------------------------" << std::endl;
- SolutionType newIterate = x;
- for (int j=0; j<newIterate.size(); j++)
- newIterate[j] = RigidBodyMotion<double,2>::exp(newIterate[j], corr[j]);
+ rhs = 0;
+ corr = 0;
- /** \todo Don't always recompute oldEnergy */
- double oldEnergy = rodAssembler.computeEnergy(x);
- double energy = rodAssembler.computeEnergy(newIterate);
+ rodAssembler.assembleGradient(x, rhs);
+ rodAssembler.assembleMatrix(x, hessianMatrix);
- if (energy >= oldEnergy)
- DUNE_THROW(SolverError, "Direction is not a descent direction!");
+ rhs *= -1;
- // Add correction to the current solution
- for (int j=0; j<x.size(); j++)
- x[j] = RigidBodyMotion<double,2>::exp(x[j], corr[j]);
+ // Create trust-region obstacle on grid0.maxLevel()
+ setTrustRegionObstacles(trustRegionRadius,
+ trustRegionObstacles[toplevel],
+ trueObstacles[toplevel],
+ dirichletNodes);
- // Subtract correction from the current obstacle
- for (int k=0; k<corr.size(); k++)
- trueObstacles[grid.maxLevel()][k] -= corr[k];
+ dynamic_cast<MultigridStep<MatrixType,CorrectionType>*>(solver.iterationStep_)->setProblem(hessianMatrix, corr, rhs, toplevel+1);
- }
+ solver.preprocess();
- // //////////////////////////////
- // Output result
- // //////////////////////////////
+ multigridStep.preprocess();
- // Write Lagrange multiplyers
- std::stringstream levelAsAscii;
- levelAsAscii << toplevel;
- std::string lagrangeFilename = "pressure/lagrange_" + levelAsAscii.str();
- std::ofstream lagrangeFile(lagrangeFilename.c_str());
- CorrectionType lagrangeMultipliers;
- rodAssembler.assembleGradient(x, lagrangeMultipliers);
- lagrangeFile << lagrangeMultipliers << std::endl;
+ // /////////////////////////////
+ // Solve !
+ // /////////////////////////////
+ solver.solve();
- // Write result grid
- std::string solutionFilename = "solutions/rod_" + levelAsAscii.str() + ".result";
- writeRod(x, solutionFilename);
+ corr = multigridStep.getSol();
- // ////////////////////////////////////////////////////////////////////////////
- // Refine locally and transfer the current solution to the new leaf level
- // ////////////////////////////////////////////////////////////////////////////
+ printf("infinity norm of the correction: %g\n", corr.infinity_norm());
+ if (corr.infinity_norm() < 1e-5) {
+ std::cout << "CORRECTION IS SMALL ENOUGH" << std::endl;
+ break;
+ }
- GeometricEstimator<GridType> estimator;
+ // ////////////////////////////////////////////////////
+ // Check whether trust-region step can be accepted
+ // ////////////////////////////////////////////////////
- estimator.estimate(grid, (toplevel<=minLevel) ? refineAll : refineCondition);
+ SolutionType newIterate = x;
+ for (int j=0; j<newIterate.size(); j++)
+ newIterate[j] = RigidBodyMotion<double,2>::exp(newIterate[j], corr[j]);
- std::cout << " #### WARNING: function not transferred to the next level! #### " << std::endl;
- grid.adapt();
- x.resize(grid.size(1));
+ /** \todo Don't always recompute oldEnergy */
+ double oldEnergy = rodAssembler.computeEnergy(x);
+ double energy = rodAssembler.computeEnergy(newIterate);
+
+ if (energy >= oldEnergy)
+ DUNE_THROW(SolverError, "Direction is not a descent direction!");
+
+ // Add correction to the current solution
+ for (int j=0; j<x.size(); j++)
+ x[j] = RigidBodyMotion<double,2>::exp(x[j], corr[j]);
+
+ // Subtract correction from the current obstacle
+ for (int k=0; k<corr.size(); k++)
+ trueObstacles[grid.maxLevel()][k] -= corr[k];
- //writeRod(x, "solutions/rod_1.result");
}
- } catch (Exception e) {
+ // //////////////////////////////
+ // Output result
+ // //////////////////////////////
+
+ // Write Lagrange multiplyers
+ std::stringstream levelAsAscii;
+ levelAsAscii << toplevel;
+ std::string lagrangeFilename = "pressure/lagrange_" + levelAsAscii.str();
+ std::ofstream lagrangeFile(lagrangeFilename.c_str());
+
+ CorrectionType lagrangeMultipliers;
+ rodAssembler.assembleGradient(x, lagrangeMultipliers);
+ lagrangeFile << lagrangeMultipliers << std::endl;
+
+ // Write result grid
+ std::string solutionFilename = "solutions/rod_" + levelAsAscii.str() + ".result";
+ writeRod(x, solutionFilename);
+
+ // ////////////////////////////////////////////////////////////////////////////
+ // Refine locally and transfer the current solution to the new leaf level
+ // ////////////////////////////////////////////////////////////////////////////
- std::cout << e << std::endl;
+ GeometricEstimator<GridType> estimator;
- }
+ estimator.estimate(grid, (toplevel<=minLevel) ? refineAll : refineCondition);
+
+ std::cout << " #### WARNING: function not transferred to the next level! #### " << std::endl;
+ grid.adapt();
+ x.resize(grid.size(1));
+
+ //writeRod(x, "solutions/rod_1.result");
+ }
+
+}
+catch (Exception e) {
+
+ std::cout << e << std::endl;
+
+}
diff --git a/src/simofoxshell.cc b/src/simofoxshell.cc
index 8904851f..f8a77af5 100644
--- a/src/simofoxshell.cc
+++ b/src/simofoxshell.cc
@@ -285,9 +285,9 @@ int main(int argc, char *argv[]) try
});
auto displacementFunctionInitial = Dune::Functions::makeDiscreteGlobalBasisFunction<FieldVector<double, 3> >(deformationPowerBasis,
- displacementInitial);
+ displacementInitial);
auto directorFunctionInitial = Dune::Functions::makeDiscreteGlobalBasisFunction<FieldVector<double, 3> >(directorPowerBasis,
- directorInitial);
+ directorInitial);
// We need to subsample, because VTK cannot natively display real second-order functions
SubsamplingVTKWriter<GridView> vtkWriter(gridView, Dune::refinementLevels(midsurfaceOrder - 1));
vtkWriter.addVertexData(displacementFunctionInitial, VTK::FieldInfo("displacement", VTK::FieldInfo::Type::scalar, 3));
@@ -301,9 +301,9 @@ int main(int argc, char *argv[]) try
// Assembler using ADOL-C
Dune::GFE::SimoFoxEnergyLocalStiffness<decltype(compositeBasis), LocalFEFunction,adouble> simoFoxEnergyADOLCLocalStiffness(materialParameters,
- &neumannBoundary,
- neumannFunction,
- nullptr, x0);
+ &neumannBoundary,
+ neumannFunction,
+ nullptr, x0);
MixedLocalGFEADOLCStiffness<decltype(compositeBasis),
RealTuple<double,3>,
@@ -328,8 +328,8 @@ int main(int argc, char *argv[]) try
BlockVector<FieldVector<double,3> > ddV(deformationPowerBasis.size());
Functions::interpolate(deformationPowerBasis, ddV, deformationDirichletValues, deformationDirichletDofs);
- for (size_t j = 0; j < x[_0].size(); j++){
- if (deformationDirichletNodes[j][0]){
+ for (size_t j = 0; j < x[_0].size(); j++) {
+ if (deformationDirichletNodes[j][0]) {
x[_0][j] = ddV[j];
}
}
@@ -339,41 +339,41 @@ int main(int argc, char *argv[]) try
// /////////////////////////////////////////////////
if (parameterSet.get<std::string>("solvertype", "trustRegion") == "trustRegion") {
- MixedRiemannianTrustRegionSolver<Grid,
- decltype(compositeBasis),
- MidsurfaceFEBasis, RealTuple<double,3>,
- DirectorFEBasis, UnitVector<double,3> > solver;
-
- solver.setup(*grid,
- &assembler,
- midsurfaceFEBasis,
- directorFEBasis,
- x,
- deformationDirichletDofs,
- orientationDirichletDofs,
- tolerance,
- maxSolverSteps,
- initialTrustRegionRadius,
- multigridIterations,
- mgTolerance,
- mu, nu1, nu2,
- baseIterations,
- baseTolerance,
- instrumented);
-
- solver.setScaling(parameterSet.get<FieldVector<double, 5> >("trustRegionScaling"));
-
- // /////////////////////////////////////////////////////
- // Solve!
- // /////////////////////////////////////////////////////
-
- solver.setInitialIterate(x);
- solver.solve();
-
- x = solver.getSol();
+ MixedRiemannianTrustRegionSolver<Grid,
+ decltype(compositeBasis),
+ MidsurfaceFEBasis, RealTuple<double,3>,
+ DirectorFEBasis, UnitVector<double,3> > solver;
+
+ solver.setup(*grid,
+ &assembler,
+ midsurfaceFEBasis,
+ directorFEBasis,
+ x,
+ deformationDirichletDofs,
+ orientationDirichletDofs,
+ tolerance,
+ maxSolverSteps,
+ initialTrustRegionRadius,
+ multigridIterations,
+ mgTolerance,
+ mu, nu1, nu2,
+ baseIterations,
+ baseTolerance,
+ instrumented);
+
+ solver.setScaling(parameterSet.get<FieldVector<double, 5> >("trustRegionScaling"));
+
+ // /////////////////////////////////////////////////////
+ // Solve!
+ // /////////////////////////////////////////////////////
+
+ solver.setInitialIterate(x);
+ solver.solve();
+
+ x = solver.getSol();
} else {
#if !MIXED_SPACE
- using TargetSpace = Dune::GFE::ProductManifold<RealTuple<double,3>,UnitVector<double,3>>;
+ using TargetSpace = Dune::GFE::ProductManifold<RealTuple<double,3>,UnitVector<double,3> >;
std::vector<TargetSpace> xTargetSpace(compositeBasis.size({0}));
BitSetVector<TargetSpace::TangentVector::dimension> dirichletDofsTargetSpace(compositeBasis.size({0}), false);
for (std::size_t i = 0; i < compositeBasis.size({0}); i++) {
@@ -384,7 +384,7 @@ int main(int argc, char *argv[]) try
for (int j = 3; j < TargetSpace::TangentVector::dimension; j ++)
dirichletDofsTargetSpace[i][j] = orientationDirichletDofs[i][j-3];
}
- using GFEAssemblerWrapper = Dune::GFE::GeodesicFEAssemblerWrapper<decltype(compositeBasis), MidsurfaceFEBasis, TargetSpace, RealTuple<double, 3>, UnitVector<double,3>>;
+ using GFEAssemblerWrapper = Dune::GFE::GeodesicFEAssemblerWrapper<decltype(compositeBasis), MidsurfaceFEBasis, TargetSpace, RealTuple<double, 3>, UnitVector<double,3> >;
GFEAssemblerWrapper assemblerNotMixed(&assembler, midsurfaceFEBasis);
RiemannianProximalNewtonSolver<MidsurfaceFEBasis, TargetSpace, GFEAssemblerWrapper> solver;
solver.setup(*grid,
diff --git a/test/adolctest-scalar-and-vector-mode.cc b/test/adolctest-scalar-and-vector-mode.cc
index a989ac63..61d8f1e5 100644
--- a/test/adolctest-scalar-and-vector-mode.cc
+++ b/test/adolctest-scalar-and-vector-mode.cc
@@ -44,14 +44,14 @@ using namespace Indices;
using ValueType = adouble;
//Types for the mixed space
-using DisplacementVector = std::vector<RealTuple<double,dim>>;
-using RotationVector = std::vector<Rotation<double,dim>>;
+using DisplacementVector = std::vector<RealTuple<double,dim> >;
+using RotationVector = std::vector<Rotation<double,dim> >;
using Vector = TupleVector<DisplacementVector, RotationVector>;
const int dimCR = Rotation<double,dim>::TangentVector::dimension; //dimCorrectionRotation = Dimension of the correction for rotations
-using CorrectionTypeMixed = MultiTypeBlockVector<BlockVector<FieldVector<double,dim> >, BlockVector<FieldVector<double,dimCR>>>;
+using CorrectionTypeMixed = MultiTypeBlockVector<BlockVector<FieldVector<double,dim> >, BlockVector<FieldVector<double,dimCR> > >;
-using MatrixRow0 = MultiTypeBlockVector<BCRSMatrix<FieldMatrix<double,dim,dim>>, BCRSMatrix<FieldMatrix<double,dim,dimCR>>>;
-using MatrixRow1 = MultiTypeBlockVector<BCRSMatrix<FieldMatrix<double,dimCR,dim>>, BCRSMatrix<FieldMatrix<double,dimCR,dimCR>>>;
+using MatrixRow0 = MultiTypeBlockVector<BCRSMatrix<FieldMatrix<double,dim,dim> >, BCRSMatrix<FieldMatrix<double,dim,dimCR> > >;
+using MatrixRow1 = MultiTypeBlockVector<BCRSMatrix<FieldMatrix<double,dimCR,dim> >, BCRSMatrix<FieldMatrix<double,dimCR,dimCR> > >;
using MatrixTypeMixed = MultiTypeBlockMatrix<MatrixRow0,MatrixRow1>;
//Types for the Non-mixed space
@@ -87,11 +87,11 @@ int main (int argc, char *argv[])
composite(
power<dim>(
lagrange<1>()
- ),
+ ),
power<dim>(
lagrange<1>()
- )
- ));
+ )
+ ));
using CompositeBasis = decltype(compositeBasis);
@@ -114,30 +114,30 @@ int main (int argc, char *argv[])
//Mixed space
CosseratEnergyLocalStiffness<decltype(compositeBasis), dim,adouble> cosseratEnergyMixed(parameters,
- nullptr,
- nullptr,
- nullptr);
+ nullptr,
+ nullptr,
+ nullptr);
MixedLocalGFEADOLCStiffness<CompositeBasis,
- RealTuple<double,dim>,
- Rotation<double,dim> > mixedLocalGFEADOLCStiffnessVector(&cosseratEnergyMixed, false);
+ RealTuple<double,dim>,
+ Rotation<double,dim> > mixedLocalGFEADOLCStiffnessVector(&cosseratEnergyMixed, false);
MixedGFEAssembler<CompositeBasis,
- RealTuple<double,dim>,
- Rotation<double,dim> > mixedAssemblerVector(compositeBasis, &mixedLocalGFEADOLCStiffnessVector);
+ RealTuple<double,dim>,
+ Rotation<double,dim> > mixedAssemblerVector(compositeBasis, &mixedLocalGFEADOLCStiffnessVector);
MixedLocalGFEADOLCStiffness<CompositeBasis,
- RealTuple<double,dim>,
- Rotation<double,dim> > mixedLocalGFEADOLCStiffnessScalar(&cosseratEnergyMixed, true);
+ RealTuple<double,dim>,
+ Rotation<double,dim> > mixedLocalGFEADOLCStiffnessScalar(&cosseratEnergyMixed, true);
MixedGFEAssembler<CompositeBasis,
- RealTuple<double,dim>,
- Rotation<double,dim> > mixedAssemblerScalar(compositeBasis, &mixedLocalGFEADOLCStiffnessScalar);
-
+ RealTuple<double,dim>,
+ Rotation<double,dim> > mixedAssemblerScalar(compositeBasis, &mixedLocalGFEADOLCStiffnessScalar);
+
//Non-mixed space
using DeformationFEBasis = Dune::Functions::LagrangeBasis<GridView,1>;
CosseratEnergyLocalStiffness<DeformationFEBasis, dim,adouble> cosseratEnergy(parameters,
- nullptr,
- nullptr,
- nullptr);
+ nullptr,
+ nullptr,
+ nullptr);
LocalGeodesicFEADOLCStiffness<DeformationFEBasis,RBM> localGFEADOLCStiffnessVector(&cosseratEnergy, false);
GeodesicFEAssembler<DeformationFEBasis,RBM> assemblerVector(gridView, localGFEADOLCStiffnessVector);
@@ -151,10 +151,12 @@ int main (int argc, char *argv[])
auto deformationPowerBasis = makeBasis(
gridView,
power<gridDim>(
- lagrange<1>()
- ));
+ lagrange<1>()
+ ));
BlockVector<FieldVector<double,gridDim> > identity(compositeBasis.size({0}));
- Functions::interpolate(deformationPowerBasis, identity, [](FieldVector<double,gridDim> x){ return x; });
+ Functions::interpolate(deformationPowerBasis, identity, [](FieldVector<double,gridDim> x){
+ return x;
+ });
BlockVector<FieldVector<double,dim> > initialDeformation(compositeBasis.size({0}));
initialDeformation = 0;
@@ -202,13 +204,13 @@ int main (int argc, char *argv[])
if (differenceMixed.frobenius_norm() > 1e-8)
{
- std::cerr << "MixedLocalGFEADOLCStiffness: The ADOL-C scalar mode and vector mode produce different Hessians!" << std::endl;
- return 1;
+ std::cerr << "MixedLocalGFEADOLCStiffness: The ADOL-C scalar mode and vector mode produce different Hessians!" << std::endl;
+ return 1;
}
if (difference.frobenius_norm() > 1e-8)
{
- std::cerr << "LocalGFEADOLCStiffness: The ADOL-C scalar mode and vector mode produce different Hessians!" << std::endl;
- return 1;
+ std::cerr << "LocalGFEADOLCStiffness: The ADOL-C scalar mode and vector mode produce different Hessians!" << std::endl;
+ return 1;
}
return 0;
}
diff --git a/test/adolctest.cc b/test/adolctest.cc
index 6529617f..b43c9062 100644
--- a/test/adolctest.cc
+++ b/test/adolctest.cc
@@ -57,41 +57,41 @@ using namespace Dune;
template<class Basis>
class LocalADOLCStiffness
{
- // grid types
- typedef typename Basis::GridView GridView;
- typedef typename GridView::ctype DT;
- typedef typename TargetSpace::ctype RT;
- typedef typename GridView::template Codim<0>::Entity Entity;
+ // grid types
+ typedef typename Basis::GridView GridView;
+ typedef typename GridView::ctype DT;
+ typedef typename TargetSpace::ctype RT;
+ typedef typename GridView::template Codim<0>::Entity Entity;
- typedef typename TargetSpace::template rebind<adouble>::other ATargetSpace;
+ typedef typename TargetSpace::template rebind<adouble>::other ATargetSpace;
- // some other sizes
- constexpr static int gridDim = GridView::dimension;
+ // some other sizes
+ constexpr static int gridDim = GridView::dimension;
public:
- //! Dimension of the embedding space
- constexpr static int embeddedBlocksize = TargetSpace::EmbeddedTangentVector::dimension;
+ //! Dimension of the embedding space
+ constexpr static int embeddedBlocksize = TargetSpace::EmbeddedTangentVector::dimension;
- LocalADOLCStiffness(const GFE::LocalEnergy<Basis, ATargetSpace>* energy)
+ LocalADOLCStiffness(const GFE::LocalEnergy<Basis, ATargetSpace>* energy)
: localEnergy_(energy)
- {}
+ {}
- /** \brief Compute the energy at the current configuration */
- virtual RT energy (const typename Basis::LocalView& localView,
- const std::vector<TargetSpace>& localSolution) const;
+ /** \brief Compute the energy at the current configuration */
+ virtual RT energy (const typename Basis::LocalView& localView,
+ const std::vector<TargetSpace>& localSolution) const;
- /** \brief Assemble the local stiffness matrix at the current position
+ /** \brief Assemble the local stiffness matrix at the current position
- This uses the automatic differentiation toolbox ADOL_C.
- */
- virtual void assembleGradientAndHessian(const typename Basis::LocalView& localView,
- const std::vector<TargetSpace>& localSolution,
- std::vector<Dune::FieldVector<double, embeddedBlocksize> >& localGradient,
- Dune::Matrix<Dune::FieldMatrix<RT,embeddedBlocksize,embeddedBlocksize> >& localHessian,
- bool vectorMode);
+ This uses the automatic differentiation toolbox ADOL_C.
+ */
+ virtual void assembleGradientAndHessian(const typename Basis::LocalView& localView,
+ const std::vector<TargetSpace>& localSolution,
+ std::vector<Dune::FieldVector<double, embeddedBlocksize> >& localGradient,
+ Dune::Matrix<Dune::FieldMatrix<RT,embeddedBlocksize,embeddedBlocksize> >& localHessian,
+ bool vectorMode);
- const GFE::LocalEnergy<Basis, ATargetSpace>* localEnergy_;
+ const GFE::LocalEnergy<Basis, ATargetSpace>* localEnergy_;
};
@@ -102,38 +102,38 @@ LocalADOLCStiffness<Basis>::
energy(const typename Basis::LocalView& localView,
const std::vector<TargetSpace>& localSolution) const
{
- double pureEnergy;
-
- std::vector<ATargetSpace> localASolution(localSolution.size());
-
- trace_on(1);
-
- adouble energy = 0;
-
- // The following loop is not quite intuitive: we copy the localSolution into an
- // array of FieldVector<double>, go from there to FieldVector<adouble> and
- // only then to ATargetSpace.
- // Rationale: The constructor/assignment-from-vector of TargetSpace frequently
- // contains a projection onto the manifold from the surrounding Euclidean space.
- // ADOL-C needs a function on the whole Euclidean space, hence that projection
- // is part of the function and needs to be taped.
-
- // The following variable cannot be declared inside of the loop, or ADOL-C will report wrong results
- // (Presumably because several independent variables use the same memory location.)
- std::vector<typename ATargetSpace::CoordinateType> aRaw(localSolution.size());
- for (size_t i=0; i<localSolution.size(); i++) {
- typename TargetSpace::CoordinateType raw = localSolution[i].globalCoordinates();
- for (size_t j=0; j<raw.size(); j++)
- aRaw[i][j] <<= raw[j];
- localASolution[i] = aRaw[i]; // may contain a projection onto M -- needs to be done in adouble
- }
+ double pureEnergy;
+
+ std::vector<ATargetSpace> localASolution(localSolution.size());
+
+ trace_on(1);
+
+ adouble energy = 0;
+
+ // The following loop is not quite intuitive: we copy the localSolution into an
+ // array of FieldVector<double>, go from there to FieldVector<adouble> and
+ // only then to ATargetSpace.
+ // Rationale: The constructor/assignment-from-vector of TargetSpace frequently
+ // contains a projection onto the manifold from the surrounding Euclidean space.
+ // ADOL-C needs a function on the whole Euclidean space, hence that projection
+ // is part of the function and needs to be taped.
+
+ // The following variable cannot be declared inside of the loop, or ADOL-C will report wrong results
+ // (Presumably because several independent variables use the same memory location.)
+ std::vector<typename ATargetSpace::CoordinateType> aRaw(localSolution.size());
+ for (size_t i=0; i<localSolution.size(); i++) {
+ typename TargetSpace::CoordinateType raw = localSolution[i].globalCoordinates();
+ for (size_t j=0; j<raw.size(); j++)
+ aRaw[i][j] <<= raw[j];
+ localASolution[i] = aRaw[i]; // may contain a projection onto M -- needs to be done in adouble
+ }
- energy = localEnergy_->energy(localView,localASolution);
+ energy = localEnergy_->energy(localView,localASolution);
- energy >>= pureEnergy;
+ energy >>= pureEnergy;
- trace_off();
- return pureEnergy;
+ trace_off();
+ return pureEnergy;
}
@@ -146,64 +146,64 @@ energy(const typename Basis::LocalView& localView,
template <class Basis>
void LocalADOLCStiffness<Basis>::
assembleGradientAndHessian(const typename Basis::LocalView& localView,
- const std::vector<TargetSpace>& localSolution,
- std::vector<Dune::FieldVector<double,embeddedBlocksize> >& localGradient,
- Dune::Matrix<Dune::FieldMatrix<RT,embeddedBlocksize,embeddedBlocksize> >& localHessian,
- bool vectorMode)
+ const std::vector<TargetSpace>& localSolution,
+ std::vector<Dune::FieldVector<double,embeddedBlocksize> >& localGradient,
+ Dune::Matrix<Dune::FieldMatrix<RT,embeddedBlocksize,embeddedBlocksize> >& localHessian,
+ bool vectorMode)
{
- // Tape energy computation. We may not have to do this every time, but it's comparatively cheap.
- energy(localView, localSolution);
-
- /////////////////////////////////////////////////////////////////
- // Compute the gradient.
- /////////////////////////////////////////////////////////////////
-
- // Copy data from Dune data structures to plain-C ones
- size_t nDofs = localSolution.size();
- size_t nDoubles = nDofs*embeddedBlocksize;
- std::vector<double> xp(nDoubles);
- int idx=0;
- for (size_t i=0; i<nDofs; i++)
- for (size_t j=0; j<embeddedBlocksize; j++)
- xp[idx++] = localSolution[i].globalCoordinates()[j];
+ // Tape energy computation. We may not have to do this every time, but it's comparatively cheap.
+ energy(localView, localSolution);
+
+ /////////////////////////////////////////////////////////////////
+ // Compute the gradient.
+ /////////////////////////////////////////////////////////////////
+
+ // Copy data from Dune data structures to plain-C ones
+ size_t nDofs = localSolution.size();
+ size_t nDoubles = nDofs*embeddedBlocksize;
+ std::vector<double> xp(nDoubles);
+ int idx=0;
+ for (size_t i=0; i<nDofs; i++)
+ for (size_t j=0; j<embeddedBlocksize; j++)
+ xp[idx++] = localSolution[i].globalCoordinates()[j];
// Compute gradient
- std::vector<double> g(nDoubles);
- gradient(1,nDoubles,xp.data(),g.data()); // gradient evaluation
-
- // Copy into Dune type
- std::vector<typename TargetSpace::EmbeddedTangentVector> localEmbeddedGradient(localSolution.size());
-
- idx=0;
- for (size_t i=0; i<nDofs; i++)
- for (size_t j=0; j<embeddedBlocksize; j++)
- localGradient[i][j] = g[idx++];
-
- /////////////////////////////////////////////////////////////////
- // Compute Hessian
- /////////////////////////////////////////////////////////////////
-
- localHessian.setSize(nDofs,nDofs);
-
- double* rawHessian[nDoubles];
- for(size_t i=0; i<nDoubles; i++)
- rawHessian[i] = (double*)malloc((i+1)*sizeof(double));
-
- if (vectorMode)
- hessian2(1,nDoubles,xp.data(),rawHessian);
- else
- hessian(1,nDoubles,xp.data(),rawHessian);
-
- // Copy Hessian into Dune data type
- for(size_t i=0; i<nDoubles; i++)
- for (size_t j=0; j<nDoubles; j++)
- {
- double value = (i>=j) ? rawHessian[i][j] : rawHessian[j][i];
- localHessian[j/embeddedBlocksize][i/embeddedBlocksize][j%embeddedBlocksize][i%embeddedBlocksize] = value;
- }
+ std::vector<double> g(nDoubles);
+ gradient(1,nDoubles,xp.data(),g.data()); // gradient evaluation
+
+ // Copy into Dune type
+ std::vector<typename TargetSpace::EmbeddedTangentVector> localEmbeddedGradient(localSolution.size());
+
+ idx=0;
+ for (size_t i=0; i<nDofs; i++)
+ for (size_t j=0; j<embeddedBlocksize; j++)
+ localGradient[i][j] = g[idx++];
- for(size_t i=0; i<nDoubles; i++)
- free(rawHessian[i]);
+ /////////////////////////////////////////////////////////////////
+ // Compute Hessian
+ /////////////////////////////////////////////////////////////////
+
+ localHessian.setSize(nDofs,nDofs);
+
+ double* rawHessian[nDoubles];
+ for(size_t i=0; i<nDoubles; i++)
+ rawHessian[i] = (double*)malloc((i+1)*sizeof(double));
+
+ if (vectorMode)
+ hessian2(1,nDoubles,xp.data(),rawHessian);
+ else
+ hessian(1,nDoubles,xp.data(),rawHessian);
+
+ // Copy Hessian into Dune data type
+ for(size_t i=0; i<nDoubles; i++)
+ for (size_t j=0; j<nDoubles; j++)
+ {
+ double value = (i>=j) ? rawHessian[i][j] : rawHessian[j][i];
+ localHessian[j/embeddedBlocksize][i/embeddedBlocksize][j%embeddedBlocksize][i%embeddedBlocksize] = value;
+ }
+
+ for(size_t i=0; i<nDoubles; i++)
+ free(rawHessian[i]);
}
@@ -212,32 +212,32 @@ assembleGradientAndHessian(const typename Basis::LocalView& localView,
template<class Basis, class field_type=double>
class LocalFDStiffness
{
- // grid types
- typedef typename Basis::GridView GridView;
- typedef typename GridView::Grid::ctype DT;
- typedef typename GridView::template Codim<0>::Entity Entity;
+ // grid types
+ typedef typename Basis::GridView GridView;
+ typedef typename GridView::Grid::ctype DT;
+ typedef typename GridView::template Codim<0>::Entity Entity;
- typedef typename TargetSpace::template rebind<field_type>::other ATargetSpace;
+ typedef typename TargetSpace::template rebind<field_type>::other ATargetSpace;
public:
- //! Dimension of a tangent space
- constexpr static int blocksize = TargetSpace::TangentVector::dimension;
+ //! Dimension of a tangent space
+ constexpr static int blocksize = TargetSpace::TangentVector::dimension;
- //! Dimension of the embedding space
- constexpr static int embeddedBlocksize = TargetSpace::EmbeddedTangentVector::dimension;
+ //! Dimension of the embedding space
+ constexpr static int embeddedBlocksize = TargetSpace::EmbeddedTangentVector::dimension;
- LocalFDStiffness(const GFE::LocalEnergy<Basis, ATargetSpace>* energy)
+ LocalFDStiffness(const GFE::LocalEnergy<Basis, ATargetSpace>* energy)
: localEnergy_(energy)
- {}
+ {}
- virtual void assembleGradientAndHessian(const typename Basis::LocalView& localView,
- const std::vector<TargetSpace>& localSolution,
- std::vector<Dune::FieldVector<double,embeddedBlocksize> >& localGradient,
- Dune::Matrix<Dune::FieldMatrix<double,embeddedBlocksize,embeddedBlocksize> >& localHessian);
+ virtual void assembleGradientAndHessian(const typename Basis::LocalView& localView,
+ const std::vector<TargetSpace>& localSolution,
+ std::vector<Dune::FieldVector<double,embeddedBlocksize> >& localGradient,
+ Dune::Matrix<Dune::FieldMatrix<double,embeddedBlocksize,embeddedBlocksize> >& localHessian);
- const GFE::LocalEnergy<Basis, ATargetSpace>* localEnergy_;
+ const GFE::LocalEnergy<Basis, ATargetSpace>* localEnergy_;
};
// ///////////////////////////////////////////////////////////
@@ -246,132 +246,132 @@ public:
template <class Basis, class field_type>
void LocalFDStiffness<Basis, field_type>::
assembleGradientAndHessian(const typename Basis::LocalView& localView,
- const std::vector<TargetSpace>& localSolution,
- std::vector<Dune::FieldVector<double, embeddedBlocksize> >& localGradient,
- Dune::Matrix<Dune::FieldMatrix<double,embeddedBlocksize,embeddedBlocksize> >& localHessian)
+ const std::vector<TargetSpace>& localSolution,
+ std::vector<Dune::FieldVector<double, embeddedBlocksize> >& localGradient,
+ Dune::Matrix<Dune::FieldMatrix<double,embeddedBlocksize,embeddedBlocksize> >& localHessian)
{
- // Number of degrees of freedom for this element
- size_t nDofs = localSolution.size();
+ // Number of degrees of freedom for this element
+ size_t nDofs = localSolution.size();
- // Clear assemble data
- localHessian.setSize(nDofs, nDofs);
- localHessian = 0;
+ // Clear assemble data
+ localHessian.setSize(nDofs, nDofs);
+ localHessian = 0;
#ifdef MULTIPRECISION
- const field_type eps = 1e-10;
+ const field_type eps = 1e-10;
#else
- const field_type eps = 1e-4;
+ const field_type eps = 1e-4;
#endif
- std::vector<ATargetSpace> localASolution(localSolution.size());
- std::vector<typename ATargetSpace::CoordinateType> aRaw(localSolution.size());
- for (size_t i=0; i<localSolution.size(); i++) {
- typename TargetSpace::CoordinateType raw = localSolution[i].globalCoordinates();
- for (size_t j=0; j<raw.size(); j++)
- aRaw[i][j] = raw[j];
- localASolution[i] = aRaw[i]; // may contain a projection onto M -- needs to be done in adouble
- }
-
- std::vector<Dune::FieldMatrix<field_type,embeddedBlocksize,embeddedBlocksize> > B(localSolution.size());
- for (size_t i=0; i<B.size(); i++)
- {
- B[i] = 0;
- for (int j=0; j<embeddedBlocksize; j++)
- B[i][j][j] = 1.0;
- }
+ std::vector<ATargetSpace> localASolution(localSolution.size());
+ std::vector<typename ATargetSpace::CoordinateType> aRaw(localSolution.size());
+ for (size_t i=0; i<localSolution.size(); i++) {
+ typename TargetSpace::CoordinateType raw = localSolution[i].globalCoordinates();
+ for (size_t j=0; j<raw.size(); j++)
+ aRaw[i][j] = raw[j];
+ localASolution[i] = aRaw[i]; // may contain a projection onto M -- needs to be done in adouble
+ }
- // Precompute negative energy at the current configuration
- // (negative because that is how we need it as part of the 2nd-order fd formula)
- field_type centerValue = -localEnergy_->energy(localView, localASolution);
+ std::vector<Dune::FieldMatrix<field_type,embeddedBlocksize,embeddedBlocksize> > B(localSolution.size());
+ for (size_t i=0; i<B.size(); i++)
+ {
+ B[i] = 0;
+ for (int j=0; j<embeddedBlocksize; j++)
+ B[i][j][j] = 1.0;
+ }
- // Precompute energy infinitesimal corrections in the directions of the local basis vectors
- std::vector<std::array<field_type,embeddedBlocksize> > forwardEnergy(nDofs);
- std::vector<std::array<field_type,embeddedBlocksize> > backwardEnergy(nDofs);
+ // Precompute negative energy at the current configuration
+ // (negative because that is how we need it as part of the 2nd-order fd formula)
+ field_type centerValue = -localEnergy_->energy(localView, localASolution);
- for (size_t i=0; i<localSolution.size(); i++) {
- for (size_t i2=0; i2<embeddedBlocksize; i2++) {
- typename ATargetSpace::EmbeddedTangentVector epsXi = B[i][i2];
- epsXi *= eps;
- typename ATargetSpace::EmbeddedTangentVector minusEpsXi = epsXi;
- minusEpsXi *= -1;
+ // Precompute energy infinitesimal corrections in the directions of the local basis vectors
+ std::vector<std::array<field_type,embeddedBlocksize> > forwardEnergy(nDofs);
+ std::vector<std::array<field_type,embeddedBlocksize> > backwardEnergy(nDofs);
- std::vector<ATargetSpace> forwardSolution = localASolution;
- std::vector<ATargetSpace> backwardSolution = localASolution;
+ for (size_t i=0; i<localSolution.size(); i++) {
+ for (size_t i2=0; i2<embeddedBlocksize; i2++) {
+ typename ATargetSpace::EmbeddedTangentVector epsXi = B[i][i2];
+ epsXi *= eps;
+ typename ATargetSpace::EmbeddedTangentVector minusEpsXi = epsXi;
+ minusEpsXi *= -1;
- forwardSolution[i] = ATargetSpace(localASolution[i].globalCoordinates() + epsXi);
- backwardSolution[i] = ATargetSpace(localASolution[i].globalCoordinates() + minusEpsXi);
+ std::vector<ATargetSpace> forwardSolution = localASolution;
+ std::vector<ATargetSpace> backwardSolution = localASolution;
- forwardEnergy[i][i2] = localEnergy_->energy(localView, forwardSolution);
- backwardEnergy[i][i2] = localEnergy_->energy(localView, backwardSolution);
+ forwardSolution[i] = ATargetSpace(localASolution[i].globalCoordinates() + epsXi);
+ backwardSolution[i] = ATargetSpace(localASolution[i].globalCoordinates() + minusEpsXi);
- }
+ forwardEnergy[i][i2] = localEnergy_->energy(localView, forwardSolution);
+ backwardEnergy[i][i2] = localEnergy_->energy(localView, backwardSolution);
}
- //////////////////////////////////////////////////////////////
- // Compute gradient by finite-difference approximation
- //////////////////////////////////////////////////////////////
+ }
- localGradient.resize(localSolution.size());
+ //////////////////////////////////////////////////////////////
+ // Compute gradient by finite-difference approximation
+ //////////////////////////////////////////////////////////////
- for (size_t i=0; i<localSolution.size(); i++)
- for (int j=0; j<embeddedBlocksize; j++)
- {
- field_type foo = (forwardEnergy[i][j] - backwardEnergy[i][j]) / (2*eps);
+ localGradient.resize(localSolution.size());
+
+ for (size_t i=0; i<localSolution.size(); i++)
+ for (int j=0; j<embeddedBlocksize; j++)
+ {
+ field_type foo = (forwardEnergy[i][j] - backwardEnergy[i][j]) / (2*eps);
#ifdef MULTIPRECISION
- localGradient[i][j] = foo.template convert_to<double>();
+ localGradient[i][j] = foo.template convert_to<double>();
#else
- localGradient[i][j] = foo;
+ localGradient[i][j] = foo;
#endif
- }
+ }
- ///////////////////////////////////////////////////////////////////////////
- // Compute Riemannian Hesse matrix by finite-difference approximation.
- // We loop over the lower left triangular half of the matrix.
- // The other half follows from symmetry.
- ///////////////////////////////////////////////////////////////////////////
- //#pragma omp parallel for schedule (dynamic)
- for (size_t i=0; i<localSolution.size(); i++) {
- for (size_t i2=0; i2<embeddedBlocksize; i2++) {
- for (size_t j=0; j<=i; j++) {
- for (size_t j2=0; j2<((i==j) ? i2+1 : embeddedBlocksize); j2++) {
-
- std::vector<ATargetSpace> forwardSolutionXiEta = localASolution;
- std::vector<ATargetSpace> backwardSolutionXiEta = localASolution;
-
- typename ATargetSpace::EmbeddedTangentVector epsXi = B[i][i2]; epsXi *= eps;
- typename ATargetSpace::EmbeddedTangentVector epsEta = B[j][j2]; epsEta *= eps;
-
- typename ATargetSpace::EmbeddedTangentVector minusEpsXi = epsXi; minusEpsXi *= -1;
- typename ATargetSpace::EmbeddedTangentVector minusEpsEta = epsEta; minusEpsEta *= -1;
-
- if (i==j)
- forwardSolutionXiEta[i] = ATargetSpace(localASolution[i].globalCoordinates() + epsXi+epsEta);
- else {
- forwardSolutionXiEta[i] = ATargetSpace(localASolution[i].globalCoordinates() + epsXi);
- forwardSolutionXiEta[j] = ATargetSpace(localASolution[j].globalCoordinates() + epsEta);
- }
-
- if (i==j)
- backwardSolutionXiEta[i] = ATargetSpace(localASolution[i].globalCoordinates() + minusEpsXi+minusEpsEta);
- else {
- backwardSolutionXiEta[i] = ATargetSpace(localASolution[i].globalCoordinates() + minusEpsXi);
- backwardSolutionXiEta[j] = ATargetSpace(localASolution[j].globalCoordinates() + minusEpsEta);
- }
-
- field_type forwardValue = localEnergy_->energy(localView, forwardSolutionXiEta) - forwardEnergy[i][i2] - forwardEnergy[j][j2];
- field_type backwardValue = localEnergy_->energy(localView, backwardSolutionXiEta) - backwardEnergy[i][i2] - backwardEnergy[j][j2];
-
- field_type foo = 0.5 * (forwardValue - 2*centerValue + backwardValue) / (eps*eps);
+ ///////////////////////////////////////////////////////////////////////////
+ // Compute Riemannian Hesse matrix by finite-difference approximation.
+ // We loop over the lower left triangular half of the matrix.
+ // The other half follows from symmetry.
+ ///////////////////////////////////////////////////////////////////////////
+ //#pragma omp parallel for schedule (dynamic)
+ for (size_t i=0; i<localSolution.size(); i++) {
+ for (size_t i2=0; i2<embeddedBlocksize; i2++) {
+ for (size_t j=0; j<=i; j++) {
+ for (size_t j2=0; j2<((i==j) ? i2+1 : embeddedBlocksize); j2++) {
+
+ std::vector<ATargetSpace> forwardSolutionXiEta = localASolution;
+ std::vector<ATargetSpace> backwardSolutionXiEta = localASolution;
+
+ typename ATargetSpace::EmbeddedTangentVector epsXi = B[i][i2]; epsXi *= eps;
+ typename ATargetSpace::EmbeddedTangentVector epsEta = B[j][j2]; epsEta *= eps;
+
+ typename ATargetSpace::EmbeddedTangentVector minusEpsXi = epsXi; minusEpsXi *= -1;
+ typename ATargetSpace::EmbeddedTangentVector minusEpsEta = epsEta; minusEpsEta *= -1;
+
+ if (i==j)
+ forwardSolutionXiEta[i] = ATargetSpace(localASolution[i].globalCoordinates() + epsXi+epsEta);
+ else {
+ forwardSolutionXiEta[i] = ATargetSpace(localASolution[i].globalCoordinates() + epsXi);
+ forwardSolutionXiEta[j] = ATargetSpace(localASolution[j].globalCoordinates() + epsEta);
+ }
+
+ if (i==j)
+ backwardSolutionXiEta[i] = ATargetSpace(localASolution[i].globalCoordinates() + minusEpsXi+minusEpsEta);
+ else {
+ backwardSolutionXiEta[i] = ATargetSpace(localASolution[i].globalCoordinates() + minusEpsXi);
+ backwardSolutionXiEta[j] = ATargetSpace(localASolution[j].globalCoordinates() + minusEpsEta);
+ }
+
+ field_type forwardValue = localEnergy_->energy(localView, forwardSolutionXiEta) - forwardEnergy[i][i2] - forwardEnergy[j][j2];
+ field_type backwardValue = localEnergy_->energy(localView, backwardSolutionXiEta) - backwardEnergy[i][i2] - backwardEnergy[j][j2];
+
+ field_type foo = 0.5 * (forwardValue - 2*centerValue + backwardValue) / (eps*eps);
#ifdef MULTIPRECISION
- localHessian[i][j][i2][j2] = localHessian[j][i][j2][i2] = foo.template convert_to<double>();
+ localHessian[i][j][i2][j2] = localHessian[j][i][j2][i2] = foo.template convert_to<double>();
#else
- localHessian[i][j][i2][j2] = localHessian[j][i][j2][i2] = foo;
+ localHessian[i][j][i2][j2] = localHessian[j][i][j2][i2] = foo;
#endif
- }
- }
}
+ }
}
+ }
}
@@ -401,7 +401,7 @@ void compareMatrices(const Matrix<FieldMatrix<double,N,N> >& matrixA, std::strin
if (relDifference > 1)
std::cout << i << ", " << j << " " << ii << ", " << jj
- << ", " << nameA << ": " << valueA << ", " << nameB << ": " << valueB << std::endl;
+ << ", " << nameA << ": " << valueA << ", " << nameB << ": " << valueB << std::endl;
}
}
}
@@ -412,184 +412,187 @@ void compareMatrices(const Matrix<FieldMatrix<double,N,N> >& matrixA, std::strin
int main (int argc, char *argv[]) try
{
- MPIHelper::instance(argc, argv);
+ MPIHelper::instance(argc, argv);
- typedef std::vector<TargetSpace> SolutionType;
- constexpr static int embeddedBlocksize = TargetSpace::EmbeddedTangentVector::dimension;
- constexpr static int blocksize = TargetSpace::TangentVector::dimension;
+ typedef std::vector<TargetSpace> SolutionType;
+ constexpr static int embeddedBlocksize = TargetSpace::EmbeddedTangentVector::dimension;
+ constexpr static int blocksize = TargetSpace::TangentVector::dimension;
- // ///////////////////////////////////////
- // Create the grid
- // ///////////////////////////////////////
- typedef YaspGrid<dim> GridType;
+ // ///////////////////////////////////////
+ // Create the grid
+ // ///////////////////////////////////////
+ typedef YaspGrid<dim> GridType;
- FieldVector<double,dim> upper = {{0.38, 0.128}};
+ FieldVector<double,dim> upper = {{0.38, 0.128}};
- std::array<int,dim> elements = {{5, 5}};
- GridType grid(upper, elements);
+ std::array<int,dim> elements = {{5, 5}};
+ GridType grid(upper, elements);
- typedef GridType::LeafGridView GridView;
- GridView gridView = grid.leafGridView();
+ typedef GridType::LeafGridView GridView;
+ GridView gridView = grid.leafGridView();
- typedef Functions::LagrangeBasis<GridView,1> FEBasis;
- FEBasis feBasis(gridView);
+ typedef Functions::LagrangeBasis<GridView,1> FEBasis;
+ FEBasis feBasis(gridView);
- // /////////////////////////////////////////
- // Read Dirichlet values
- // /////////////////////////////////////////
+ // /////////////////////////////////////////
+ // Read Dirichlet values
+ // /////////////////////////////////////////
- // //////////////////////////
- // Initial iterate
- // //////////////////////////
+ // //////////////////////////
+ // Initial iterate
+ // //////////////////////////
- SolutionType x(feBasis.size());
+ SolutionType x(feBasis.size());
- //////////////////////////////////////////7
- // Read initial iterate from file
- //////////////////////////////////////////7
+ //////////////////////////////////////////7
+ // Read initial iterate from file
+ //////////////////////////////////////////7
#if 0
- Dune::BlockVector<FieldVector<double,7> > xEmbedded(x.size());
+ Dune::BlockVector<FieldVector<double,7> > xEmbedded(x.size());
- std::ifstream file("dangerous_iterate", std::ios::in|std::ios::binary);
- if (not(file))
- DUNE_THROW(SolverError, "Couldn't open file 'dangerous_iterate' for reading");
+ std::ifstream file("dangerous_iterate", std::ios::in|std::ios::binary);
+ if (not (file))
+ DUNE_THROW(SolverError, "Couldn't open file 'dangerous_iterate' for reading");
- GenericVector::readBinary(file, xEmbedded);
+ GenericVector::readBinary(file, xEmbedded);
- file.close();
+ file.close();
- for (int ii=0; ii<x.size(); ii++)
- x[ii] = xEmbedded[ii];
+ for (int ii=0; ii<x.size(); ii++)
+ x[ii] = xEmbedded[ii];
#else
- auto identity = [](const FieldVector<double,2>& x) -> FieldVector<double,3> { return {x[0], x[1], 0};};
-
- std::vector<FieldVector<double,3> > v;
- using namespace Functions::BasisFactory;
-
- auto powerBasis = makeBasis(
- gridView,
- power<3>(
- lagrange<1>(),
- blockedInterleaved()
+ auto identity = [](const FieldVector<double,2>& x) -> FieldVector<double,3> {
+ return {x[0], x[1], 0};
+ };
+
+ std::vector<FieldVector<double,3> > v;
+ using namespace Functions::BasisFactory;
+
+ auto powerBasis = makeBasis(
+ gridView,
+ power<3>(
+ lagrange<1>(),
+ blockedInterleaved()
));
- Functions::interpolate(powerBasis, v, identity);
+ Functions::interpolate(powerBasis, v, identity);
- for (size_t i=0; i<x.size(); i++)
- x[i].r = v[i];
+ for (size_t i=0; i<x.size(); i++)
+ x[i].r = v[i];
#endif
- // ////////////////////////////////////////////////////////////
- // Create an assembler for the energy functional
- // ////////////////////////////////////////////////////////////
+ // ////////////////////////////////////////////////////////////
+ // Create an assembler for the energy functional
+ // ////////////////////////////////////////////////////////////
- ParameterTree materialParameters;
- materialParameters["thickness"] = "1";
- materialParameters["mu"] = "1";
- materialParameters["lambda"] = "1";
- materialParameters["mu_c"] = "1";
- materialParameters["L_c"] = "1";
- materialParameters["q"] = "2";
- materialParameters["kappa"] = "1";
- materialParameters["b1"] = "1";
- materialParameters["b2"] = "1";
- materialParameters["b3"] = "1";
+ ParameterTree materialParameters;
+ materialParameters["thickness"] = "1";
+ materialParameters["mu"] = "1";
+ materialParameters["lambda"] = "1";
+ materialParameters["mu_c"] = "1";
+ materialParameters["L_c"] = "1";
+ materialParameters["q"] = "2";
+ materialParameters["kappa"] = "1";
+ materialParameters["b1"] = "1";
+ materialParameters["b2"] = "1";
+ materialParameters["b3"] = "1";
- ///////////////////////////////////////////////////////////////////////
- // Assemblers for the Euclidean derivatives in an embedding space
- ///////////////////////////////////////////////////////////////////////
+ ///////////////////////////////////////////////////////////////////////
+ // Assemblers for the Euclidean derivatives in an embedding space
+ ///////////////////////////////////////////////////////////////////////
- // Assembler using ADOL-C
- CosseratEnergyLocalStiffness<FEBasis,
- 3,adouble> cosseratEnergyADOLCLocalStiffness(materialParameters, nullptr, nullptr, nullptr);
+ // Assembler using ADOL-C
+ CosseratEnergyLocalStiffness<FEBasis,
+ 3,adouble> cosseratEnergyADOLCLocalStiffness(materialParameters, nullptr, nullptr, nullptr);
- LocalADOLCStiffness<FEBasis> localADOLCStiffness(&cosseratEnergyADOLCLocalStiffness);
+ LocalADOLCStiffness<FEBasis> localADOLCStiffness(&cosseratEnergyADOLCLocalStiffness);
- CosseratEnergyLocalStiffness<FEBasis,
- 3,FDType> cosseratEnergyFDLocalStiffness(materialParameters, nullptr, nullptr, nullptr);
+ CosseratEnergyLocalStiffness<FEBasis,
+ 3,FDType> cosseratEnergyFDLocalStiffness(materialParameters, nullptr, nullptr, nullptr);
- LocalFDStiffness<FEBasis,FDType> localFDStiffness(&cosseratEnergyFDLocalStiffness);
+ LocalFDStiffness<FEBasis,FDType> localFDStiffness(&cosseratEnergyFDLocalStiffness);
- ///////////////////////////////////////////////////////////////////////
- // Assemblers for the Riemannian derivatives without embedding space
- ///////////////////////////////////////////////////////////////////////
+ ///////////////////////////////////////////////////////////////////////
+ // Assemblers for the Riemannian derivatives without embedding space
+ ///////////////////////////////////////////////////////////////////////
- // Assembler using ADOL-C
- LocalGeodesicFEADOLCStiffness<FEBasis,
- TargetSpace> localGFEADOLCStiffness(&cosseratEnergyADOLCLocalStiffness);
+ // Assembler using ADOL-C
+ LocalGeodesicFEADOLCStiffness<FEBasis,
+ TargetSpace> localGFEADOLCStiffness(&cosseratEnergyADOLCLocalStiffness);
- LocalGeodesicFEFDStiffness<FEBasis,
- TargetSpace,
- FDType> localGFEFDStiffness(&cosseratEnergyFDLocalStiffness);
+ LocalGeodesicFEFDStiffness<FEBasis,
+ TargetSpace,
+ FDType> localGFEFDStiffness(&cosseratEnergyFDLocalStiffness);
- // Compute and compare matrices
- for (const auto& element : Dune::elements(gridView))
- {
- std::cout << " ++++ element " << gridView.indexSet().index(element) << " ++++" << std::endl;
+ // Compute and compare matrices
+ for (const auto& element : Dune::elements(gridView))
+ {
+ std::cout << " ++++ element " << gridView.indexSet().index(element) << " ++++" << std::endl;
- auto localView = feBasis.localView();
- localView.bind(element);
+ auto localView = feBasis.localView();
+ localView.bind(element);
- const int numOfBaseFct = localView.size();
+ const int numOfBaseFct = localView.size();
- // Extract local configuration
- std::vector<TargetSpace> localSolution(numOfBaseFct);
+ // Extract local configuration
+ std::vector<TargetSpace> localSolution(numOfBaseFct);
- for (int i=0; i<numOfBaseFct; i++)
- localSolution[i] = x[localView.index(i)];
+ for (int i=0; i<numOfBaseFct; i++)
+ localSolution[i] = x[localView.index(i)];
- std::vector<Dune::FieldVector<double,embeddedBlocksize> > localADGradient(numOfBaseFct);
- std::vector<Dune::FieldVector<double,embeddedBlocksize> > localADVMGradient(numOfBaseFct); // VM: vector-mode
- std::vector<Dune::FieldVector<double,embeddedBlocksize> > localFDGradient(numOfBaseFct);
+ std::vector<Dune::FieldVector<double,embeddedBlocksize> > localADGradient(numOfBaseFct);
+ std::vector<Dune::FieldVector<double,embeddedBlocksize> > localADVMGradient(numOfBaseFct); // VM: vector-mode
+ std::vector<Dune::FieldVector<double,embeddedBlocksize> > localFDGradient(numOfBaseFct);
- Matrix<FieldMatrix<double,embeddedBlocksize,embeddedBlocksize> > localADHessian;
- Matrix<FieldMatrix<double,embeddedBlocksize,embeddedBlocksize> > localADVMHessian; // VM: vector-mode
- Matrix<FieldMatrix<double,embeddedBlocksize,embeddedBlocksize> > localFDHessian;
+ Matrix<FieldMatrix<double,embeddedBlocksize,embeddedBlocksize> > localADHessian;
+ Matrix<FieldMatrix<double,embeddedBlocksize,embeddedBlocksize> > localADVMHessian; // VM: vector-mode
+ Matrix<FieldMatrix<double,embeddedBlocksize,embeddedBlocksize> > localFDHessian;
- // Assemble Euclidean derivatives
- localADOLCStiffness.assembleGradientAndHessian(localView,
- localSolution,
- localADGradient,
- localADHessian,
- false); // 'true' means 'vector mode'
+ // Assemble Euclidean derivatives
+ localADOLCStiffness.assembleGradientAndHessian(localView,
+ localSolution,
+ localADGradient,
+ localADHessian,
+ false); // 'true' means 'vector mode'
- localADOLCStiffness.assembleGradientAndHessian(localView,
- localSolution,
- localADGradient,
- localADVMHessian,
- true); // 'true' means 'vector mode'
+ localADOLCStiffness.assembleGradientAndHessian(localView,
+ localSolution,
+ localADGradient,
+ localADVMHessian,
+ true); // 'true' means 'vector mode'
- localFDStiffness.assembleGradientAndHessian(localView,
- localSolution,
- localFDGradient,
- localFDHessian);
+ localFDStiffness.assembleGradientAndHessian(localView,
+ localSolution,
+ localFDGradient,
+ localFDHessian);
- // compare
- compareMatrices(localADHessian, "AD", localFDHessian, "FD");
- compareMatrices(localADHessian, "AD scalar", localADVMHessian, "AD vector");
+ // compare
+ compareMatrices(localADHessian, "AD", localFDHessian, "FD");
+ compareMatrices(localADHessian, "AD scalar", localADVMHessian, "AD vector");
- // Assemble Riemannian derivatives
- std::vector<Dune::FieldVector<double,blocksize> > localRiemannianADGradient(numOfBaseFct);
- std::vector<Dune::FieldVector<double,blocksize> > localRiemannianFDGradient(numOfBaseFct);
+ // Assemble Riemannian derivatives
+ std::vector<Dune::FieldVector<double,blocksize> > localRiemannianADGradient(numOfBaseFct);
+ std::vector<Dune::FieldVector<double,blocksize> > localRiemannianFDGradient(numOfBaseFct);
- Matrix<FieldMatrix<double,blocksize,blocksize> > localRiemannianADHessian;
- Matrix<FieldMatrix<double,blocksize,blocksize> > localRiemannianFDHessian;
+ Matrix<FieldMatrix<double,blocksize,blocksize> > localRiemannianADHessian;
+ Matrix<FieldMatrix<double,blocksize,blocksize> > localRiemannianFDHessian;
- localGFEADOLCStiffness.assembleGradientAndHessian(localView,
- localSolution,
- localRiemannianADGradient);
+ localGFEADOLCStiffness.assembleGradientAndHessian(localView,
+ localSolution,
+ localRiemannianADGradient);
- localGFEFDStiffness.assembleGradientAndHessian(localView,
- localSolution,
- localRiemannianFDGradient);
+ localGFEFDStiffness.assembleGradientAndHessian(localView,
+ localSolution,
+ localRiemannianFDGradient);
- // compare
- compareMatrices(localGFEADOLCStiffness.A_, "Riemannian AD", localGFEFDStiffness.A_, "Riemannian FD");
+ // compare
+ compareMatrices(localGFEADOLCStiffness.A_, "Riemannian AD", localGFEFDStiffness.A_, "Riemannian FD");
- }
+ }
- // //////////////////////////////
- } catch (Exception& e) {
+ // //////////////////////////////
+}
+catch (Exception& e) {
- std::cout << e.what() << std::endl;
+ std::cout << e.what() << std::endl;
- }
+}
diff --git a/test/averagedistanceassemblertest.cc b/test/averagedistanceassemblertest.cc
index c106a08a..0dcb7ccf 100644
--- a/test/averagedistanceassemblertest.cc
+++ b/test/averagedistanceassemblertest.cc
@@ -25,73 +25,73 @@ void assembleGradientAndHessianApproximation(const DistanceAssembler& assembler,
typename TargetSpace::TangentVector& gradient,
FieldMatrix<double, TargetSpace::TangentVector::dimension, TargetSpace::TangentVector::dimension>& hesseMatrix)
{
- using field_type = typename TargetSpace::field_type;
- constexpr auto blocksize = TargetSpace::TangentVector::dimension;
- constexpr auto embeddedBlocksize = TargetSpace::EmbeddedTangentVector::dimension;
-
- const field_type eps = 1e-4;
-
- FieldMatrix<double,blocksize,embeddedBlocksize> B = argument.orthonormalFrame();
-
- // Precompute negative energy at the current configuration
- // (negative because that is how we need it as part of the 2nd-order fd formula)
- field_type centerValue = -assembler.value(argument);
-
- // Precompute energy infinitesimal corrections in the directions of the local basis vectors
- std::array<field_type,blocksize> forwardEnergy;
- std::array<field_type,blocksize> backwardEnergy;
-
- for (size_t i2=0; i2<blocksize; i2++)
+ using field_type = typename TargetSpace::field_type;
+ constexpr auto blocksize = TargetSpace::TangentVector::dimension;
+ constexpr auto embeddedBlocksize = TargetSpace::EmbeddedTangentVector::dimension;
+
+ const field_type eps = 1e-4;
+
+ FieldMatrix<double,blocksize,embeddedBlocksize> B = argument.orthonormalFrame();
+
+ // Precompute negative energy at the current configuration
+ // (negative because that is how we need it as part of the 2nd-order fd formula)
+ field_type centerValue = -assembler.value(argument);
+
+ // Precompute energy infinitesimal corrections in the directions of the local basis vectors
+ std::array<field_type,blocksize> forwardEnergy;
+ std::array<field_type,blocksize> backwardEnergy;
+
+ for (size_t i2=0; i2<blocksize; i2++)
+ {
+ typename TargetSpace::EmbeddedTangentVector epsXi = B[i2];
+ epsXi *= eps;
+ typename TargetSpace::EmbeddedTangentVector minusEpsXi = epsXi;
+ minusEpsXi *= -1;
+
+ TargetSpace forwardSolution = argument;
+ TargetSpace backwardSolution = argument;
+
+ forwardSolution = TargetSpace::exp(argument,epsXi);
+ backwardSolution = TargetSpace::exp(argument,minusEpsXi);
+
+ forwardEnergy[i2] = assembler.value(forwardSolution);
+ backwardEnergy[i2] = assembler.value(backwardSolution);
+ }
+
+ //////////////////////////////////////////////////////////////
+ // Compute gradient by finite-difference approximation
+ //////////////////////////////////////////////////////////////
+
+ for (int j=0; j<blocksize; j++)
+ gradient[j] = (forwardEnergy[j] - backwardEnergy[j]) / (2*eps);
+
+ ///////////////////////////////////////////////////////////////////////////
+ // Compute Riemannian Hesse matrix by finite-difference approximation.
+ // We loop over the lower left triangular half of the matrix.
+ // The other half follows from symmetry.
+ ///////////////////////////////////////////////////////////////////////////
+ for (size_t i2=0; i2<blocksize; i2++)
+ {
+ for (size_t j2=0; j2<i2+1; j2++)
{
- typename TargetSpace::EmbeddedTangentVector epsXi = B[i2];
- epsXi *= eps;
- typename TargetSpace::EmbeddedTangentVector minusEpsXi = epsXi;
- minusEpsXi *= -1;
+ TargetSpace forwardSolutionXiEta = argument;
+ TargetSpace backwardSolutionXiEta = argument;
- TargetSpace forwardSolution = argument;
- TargetSpace backwardSolution = argument;
+ typename TargetSpace::EmbeddedTangentVector epsXi = B[i2]; epsXi *= eps;
+ typename TargetSpace::EmbeddedTangentVector epsEta = B[j2]; epsEta *= eps;
- forwardSolution = TargetSpace::exp(argument,epsXi);
- backwardSolution = TargetSpace::exp(argument,minusEpsXi);
+ typename TargetSpace::EmbeddedTangentVector minusEpsXi = epsXi; minusEpsXi *= -1;
+ typename TargetSpace::EmbeddedTangentVector minusEpsEta = epsEta; minusEpsEta *= -1;
- forwardEnergy[i2] = assembler.value(forwardSolution);
- backwardEnergy[i2] = assembler.value(backwardSolution);
- }
-
- //////////////////////////////////////////////////////////////
- // Compute gradient by finite-difference approximation
- //////////////////////////////////////////////////////////////
-
- for (int j=0; j<blocksize; j++)
- gradient[j] = (forwardEnergy[j] - backwardEnergy[j]) / (2*eps);
-
- ///////////////////////////////////////////////////////////////////////////
- // Compute Riemannian Hesse matrix by finite-difference approximation.
- // We loop over the lower left triangular half of the matrix.
- // The other half follows from symmetry.
- ///////////////////////////////////////////////////////////////////////////
- for (size_t i2=0; i2<blocksize; i2++)
- {
- for (size_t j2=0; j2<i2+1; j2++)
- {
- TargetSpace forwardSolutionXiEta = argument;
- TargetSpace backwardSolutionXiEta = argument;
+ forwardSolutionXiEta = TargetSpace::exp(argument, epsXi+epsEta);
+ backwardSolutionXiEta = TargetSpace::exp(argument, minusEpsXi+minusEpsEta);
- typename TargetSpace::EmbeddedTangentVector epsXi = B[i2]; epsXi *= eps;
- typename TargetSpace::EmbeddedTangentVector epsEta = B[j2]; epsEta *= eps;
+ field_type forwardValue = assembler.value(forwardSolutionXiEta) - forwardEnergy[i2] - forwardEnergy[j2];
+ field_type backwardValue = assembler.value(backwardSolutionXiEta) - backwardEnergy[i2] - backwardEnergy[j2];
- typename TargetSpace::EmbeddedTangentVector minusEpsXi = epsXi; minusEpsXi *= -1;
- typename TargetSpace::EmbeddedTangentVector minusEpsEta = epsEta; minusEpsEta *= -1;
-
- forwardSolutionXiEta = TargetSpace::exp(argument, epsXi+epsEta);
- backwardSolutionXiEta = TargetSpace::exp(argument, minusEpsXi+minusEpsEta);
-
- field_type forwardValue = assembler.value(forwardSolutionXiEta) - forwardEnergy[i2] - forwardEnergy[j2];
- field_type backwardValue = assembler.value(backwardSolutionXiEta) - backwardEnergy[i2] - backwardEnergy[j2];
-
- hesseMatrix[i2][j2] = hesseMatrix[j2][i2] = 0.5 * (forwardValue - 2*centerValue + backwardValue) / (eps*eps);
- }
+ hesseMatrix[i2][j2] = hesseMatrix[j2][i2] = 0.5 * (forwardValue - 2*centerValue + backwardValue) / (eps*eps);
}
+ }
}
@@ -99,160 +99,160 @@ void assembleGradientAndHessianApproximation(const DistanceAssembler& assembler,
/** \brief Test whether interpolation is invariant under permutation of the simplex vertices
*/
template <class TargetSpace>
-void testPoint(const std::vector<TargetSpace>& corners,
+void testPoint(const std::vector<TargetSpace>& corners,
const std::vector<double>& weights,
const TargetSpace& argument)
{
- // create the assembler
- AverageDistanceAssembler<TargetSpace> assembler(corners, weights);
-
- // test the functional
- double value = assembler.value(argument);
- assert(!std::isnan(value));
- assert(value >= 0);
-
- // test the gradient
- typename TargetSpace::TangentVector gradient;
- assembler.assembleGradient(argument, gradient);
- typename TargetSpace::TangentVector gradientApproximation;
-
- // test the hessian
- FieldMatrix<double, TargetSpace::TangentVector::dimension, TargetSpace::TangentVector::dimension> hessian;
- FieldMatrix<double, TargetSpace::TangentVector::dimension, TargetSpace::TangentVector::dimension> hessianApproximation(0);
-
- assembler.assembleHessian(argument, hessian);
- assembleGradientAndHessianApproximation(assembler, argument,
- gradientApproximation, hessianApproximation);
-
- // Check gradient
- for (size_t i=0; i<gradient.size(); i++)
+ // create the assembler
+ AverageDistanceAssembler<TargetSpace> assembler(corners, weights);
+
+ // test the functional
+ double value = assembler.value(argument);
+ assert(!std::isnan(value));
+ assert(value >= 0);
+
+ // test the gradient
+ typename TargetSpace::TangentVector gradient;
+ assembler.assembleGradient(argument, gradient);
+ typename TargetSpace::TangentVector gradientApproximation;
+
+ // test the hessian
+ FieldMatrix<double, TargetSpace::TangentVector::dimension, TargetSpace::TangentVector::dimension> hessian;
+ FieldMatrix<double, TargetSpace::TangentVector::dimension, TargetSpace::TangentVector::dimension> hessianApproximation(0);
+
+ assembler.assembleHessian(argument, hessian);
+ assembleGradientAndHessianApproximation(assembler, argument,
+ gradientApproximation, hessianApproximation);
+
+ // Check gradient
+ for (size_t i=0; i<gradient.size(); i++)
+ {
+ if (std::isnan(gradient[i]))
+ DUNE_THROW(Dune::Exception, "Gradient contains NaN");
+ if (std::isnan(gradientApproximation[i]))
+ DUNE_THROW(Dune::Exception, "Gradient approximation contains NaN");
+ if (std::abs(gradient[i] - gradientApproximation[i]) > 1e-6)
+ DUNE_THROW(Dune::Exception, "Gradient and its approximation do not match");
+ }
+
+ // Check Hesse matrix
+ for (size_t i=0; i<hessian.N(); i++)
+ for (size_t j=0; j<hessian.M(); j++)
{
- if (std::isnan(gradient[i]))
- DUNE_THROW(Dune::Exception, "Gradient contains NaN");
- if (std::isnan(gradientApproximation[i]))
- DUNE_THROW(Dune::Exception, "Gradient approximation contains NaN");
- if (std::abs(gradient[i] - gradientApproximation[i]) > 1e-6)
- DUNE_THROW(Dune::Exception, "Gradient and its approximation do not match");
+ if (std::isnan(hessian[i][j]))
+ DUNE_THROW(Dune::Exception, "Hesse matrix contains NaN");
+ if (std::isnan(hessianApproximation[i][j]))
+ DUNE_THROW(Dune::Exception, "Hesse matrix approximation contains NaN");
+ if (std::abs(hessian[i][j] - hessianApproximation[i][j]) > 1e-6)
+ DUNE_THROW(Dune::Exception, "Hesse matrix and its approximation do not match");
}
- // Check Hesse matrix
- for (size_t i=0; i<hessian.N(); i++)
- for (size_t j=0; j<hessian.M(); j++)
- {
- if (std::isnan(hessian[i][j]))
- DUNE_THROW(Dune::Exception, "Hesse matrix contains NaN");
- if (std::isnan(hessianApproximation[i][j]))
- DUNE_THROW(Dune::Exception, "Hesse matrix approximation contains NaN");
- if (std::abs(hessian[i][j] - hessianApproximation[i][j]) > 1e-6)
- DUNE_THROW(Dune::Exception, "Hesse matrix and its approximation do not match");
- }
-
}
template <class TargetSpace>
-void testWeightSet(const std::vector<TargetSpace>& corners,
+void testWeightSet(const std::vector<TargetSpace>& corners,
const TargetSpace& argument)
{
- // A quadrature rule as a set of test points
- int quadOrder = 3;
-
- const auto& quad = QuadratureRules<double, dim>::rule(GeometryTypes::simplex(dim), quadOrder);
-
- for (size_t pt=0; pt<quad.size(); pt++) {
-
- const Dune::FieldVector<double,dim>& quadPos = quad[pt].position();
-
- // local to barycentric coordinates
- std::vector<double> weights(dim+1);
- weights[0] = 1;
- for (int i=0; i<dim; i++) {
- weights[0] -= quadPos[i];
- weights[i+1] = quadPos[i];
- }
-
- testPoint(corners, weights, argument);
+ // A quadrature rule as a set of test points
+ int quadOrder = 3;
+
+ const auto& quad = QuadratureRules<double, dim>::rule(GeometryTypes::simplex(dim), quadOrder);
+ for (size_t pt=0; pt<quad.size(); pt++) {
+
+ const Dune::FieldVector<double,dim>& quadPos = quad[pt].position();
+
+ // local to barycentric coordinates
+ std::vector<double> weights(dim+1);
+ weights[0] = 1;
+ for (int i=0; i<dim; i++) {
+ weights[0] -= quadPos[i];
+ weights[i+1] = quadPos[i];
}
+ testPoint(corners, weights, argument);
+
+ }
+
}
void testRealTuples()
{
- typedef RealTuple<double,1> TargetSpace;
-
- std::vector<TargetSpace> corners = {TargetSpace(1),
- TargetSpace(2),
- TargetSpace(3)};
-
- TargetSpace argument = corners[0];
- testWeightSet(corners, argument);
- argument = corners[1];
- testWeightSet(corners, argument);
- argument = corners[2];
- testWeightSet(corners, argument);
+ typedef RealTuple<double,1> TargetSpace;
+
+ std::vector<TargetSpace> corners = {TargetSpace(1),
+ TargetSpace(2),
+ TargetSpace(3)};
+
+ TargetSpace argument = corners[0];
+ testWeightSet(corners, argument);
+ argument = corners[1];
+ testWeightSet(corners, argument);
+ argument = corners[2];
+ testWeightSet(corners, argument);
}
void testUnitVectors()
{
- typedef UnitVector<double,3> TargetSpace;
+ typedef UnitVector<double,3> TargetSpace;
- std::vector<TargetSpace> corners(dim+1);
+ std::vector<TargetSpace> corners(dim+1);
- corners[0] = {1,0,0};
- corners[1] = {0,1,0};
- corners[2] = {0,0,1};
+ corners[0] = {1,0,0};
+ corners[1] = {0,1,0};
+ corners[2] = {0,0,1};
- TargetSpace argument = corners[0];
- testWeightSet(corners, argument);
- argument = corners[1];
- testWeightSet(corners, argument);
- argument = corners[2];
- testWeightSet(corners, argument);
+ TargetSpace argument = corners[0];
+ testWeightSet(corners, argument);
+ argument = corners[1];
+ testWeightSet(corners, argument);
+ argument = corners[2];
+ testWeightSet(corners, argument);
}
void testRotations()
{
- typedef Rotation<double,3> TargetSpace;
-
- std::vector<TargetSpace> corners(dim+1);
- corners[0] = Rotation<double,3>({1,0,0}, 0.1);
- corners[1] = Rotation<double,3>({0,1,0}, 0.1);
- corners[2] = Rotation<double,3>({0,0,1}, 0.1);
-
- TargetSpace argument = corners[0];
- testWeightSet(corners, argument);
- argument = corners[1];
- testWeightSet(corners, argument);
- argument = corners[2];
- testWeightSet(corners, argument);
+ typedef Rotation<double,3> TargetSpace;
+
+ std::vector<TargetSpace> corners(dim+1);
+ corners[0] = Rotation<double,3>({1,0,0}, 0.1);
+ corners[1] = Rotation<double,3>({0,1,0}, 0.1);
+ corners[2] = Rotation<double,3>({0,0,1}, 0.1);
+
+ TargetSpace argument = corners[0];
+ testWeightSet(corners, argument);
+ argument = corners[1];
+ testWeightSet(corners, argument);
+ argument = corners[2];
+ testWeightSet(corners, argument);
}
void testProductManifold()
{
- typedef Dune::GFE::ProductManifold<RealTuple<double,5>,UnitVector<double,3>, Rotation<double,3>> TargetSpace;
+ typedef Dune::GFE::ProductManifold<RealTuple<double,5>,UnitVector<double,3>, Rotation<double,3> > TargetSpace;
- std::vector<TargetSpace> corners(dim+1);
+ std::vector<TargetSpace> corners(dim+1);
- std::generate(corners.begin(), corners.end(), []() {
- return Dune::GFE::randomFieldVector<typename TargetSpace::field_type,TargetSpace::CoordinateType::dimension>(0.9,1.1);
- });
+ std::generate(corners.begin(), corners.end(), []() {
+ return Dune::GFE::randomFieldVector<typename TargetSpace::field_type,TargetSpace::CoordinateType::dimension>(0.9,1.1);
+ });
- TargetSpace argument = corners[0];
- testWeightSet(corners, argument);
- argument = corners[1];
- testWeightSet(corners, argument);
- argument = corners[2];
- testWeightSet(corners, argument);
+ TargetSpace argument = corners[0];
+ testWeightSet(corners, argument);
+ argument = corners[1];
+ testWeightSet(corners, argument);
+ argument = corners[2];
+ testWeightSet(corners, argument);
}
int main()
{
- testRealTuples();
- testUnitVectors();
- testRotations();
- testProductManifold();
+ testRealTuples();
+ testUnitVectors();
+ testRotations();
+ testProductManifold();
}
diff --git a/test/cosseratcontinuumtest.cc b/test/cosseratcontinuumtest.cc
index 8bcf1a00..54f8dd91 100644
--- a/test/cosseratcontinuumtest.cc
+++ b/test/cosseratcontinuumtest.cc
@@ -62,14 +62,14 @@ int main (int argc, char *argv[])
// ///////////////////////////////////////
using GridType = UGGrid<dim>;
- //Create a grid with 2 elements, one element will get refined to create different element types, the other one stays a cube
+ //Create a grid with 2 elements, one element will get refined to create different element types, the other one stays a cube
std::shared_ptr<GridType> grid = StructuredGridFactory<GridType>::createCubeGrid({0,0,0}, {1,1,1}, {2,1,1});
// Refine once
- for (auto&& e : elements(grid->leafGridView())){
+ for (auto&& e : elements(grid->leafGridView())) {
bool refineThisElement = false;
for (int i = 0; i < e.geometry().corners(); i++) {
- refineThisElement = refineThisElement || (e.geometry().corner(i)[0] > 0.99);
+ refineThisElement = refineThisElement || (e.geometry().corner(i)[0] > 0.99);
}
grid->mark(refineThisElement ? 1 : 0, e);
}
@@ -90,12 +90,12 @@ int main (int argc, char *argv[])
gridView,
composite(
power<dim>(
- lagrange<displacementOrder>()
- ),
+ lagrange<displacementOrder>()
+ ),
power<dimRotation>(
- lagrange<rotationOrder>()
- )
- ));
+ lagrange<rotationOrder>()
+ )
+ ));
using CompositeBasis = decltype(compositeBasis);
using DeformationFEBasis = Functions::LagrangeBasis<GridView,displacementOrder>;
@@ -112,18 +112,22 @@ int main (int argc, char *argv[])
gridView,
composite(
power<dim>(
- lagrange<displacementOrder>()
- ),
+ lagrange<displacementOrder>()
+ ),
power<dim>(
- lagrange<rotationOrder>()
- )
- ));
+ lagrange<rotationOrder>()
+ )
+ ));
auto deformationPowerBasis = Functions::subspaceBasis(identityBasis, _0);
auto rotationPowerBasis = Functions::subspaceBasis(identityBasis, _1);
- MultiTypeBlockVector<BlockVector<FieldVector<double,dim>>,BlockVector<FieldVector<double,dim>>> identity;
- Functions::interpolate(deformationPowerBasis, identity, [&](FieldVector<double,dim> x){ return x;});
- Functions::interpolate(rotationPowerBasis, identity, [&](FieldVector<double,dim> x){ return x;});
+ MultiTypeBlockVector<BlockVector<FieldVector<double,dim> >,BlockVector<FieldVector<double,dim> > > identity;
+ Functions::interpolate(deformationPowerBasis, identity, [&](FieldVector<double,dim> x){
+ return x;
+ });
+ Functions::interpolate(rotationPowerBasis, identity, [&](FieldVector<double,dim> x){
+ return x;
+ });
BitSetVector<dim> deformationDirichletDofs(deformationFEBasis.size(), false);
BitSetVector<dim> orientationDirichletDofs(orientationFEBasis.size(), false);
@@ -132,40 +136,40 @@ int main (int argc, char *argv[])
// Make predicate function that computes which vertices are on the Dirichlet boundary, based on the vertex positions.
auto isDirichlet = [](FieldVector<double,dim> coordinate)
- {
- return coordinate[0] < 0.01;
- };
+ {
+ return coordinate[0] < 0.01;
+ };
for (size_t i=0; i<deformationFEBasis.size(); i++) {
- bool isDirichletDeformation = isDirichlet(identity[_0][i]);
- for (size_t j=0; j<dim; j++)
- deformationDirichletDofs[i][j] = isDirichletDeformation;
+ bool isDirichletDeformation = isDirichlet(identity[_0][i]);
+ for (size_t j=0; j<dim; j++)
+ deformationDirichletDofs[i][j] = isDirichletDeformation;
}
for (size_t i=0; i<orientationFEBasis.size(); i++) {
- bool isDirichletOrientation = isDirichlet(identity[_1][i]);
- for (size_t j=0; j<dim; j++)
- orientationDirichletDofs[i][j] = isDirichletOrientation;
+ bool isDirichletOrientation = isDirichlet(identity[_1][i]);
+ for (size_t j=0; j<dim; j++)
+ orientationDirichletDofs[i][j] = isDirichletOrientation;
}
// /////////////////////////////////////////
// Determine Neumann dofs and values
- // /////////////////////////////////////////
+ // /////////////////////////////////////////
std::function<bool(FieldVector<double,dim>)> isNeumann = [](FieldVector<double,dim> coordinate) {
- return coordinate[0] > 0.99;
- };
+ return coordinate[0] > 0.99;
+ };
BitSetVector<1> neumannVertices(gridView.size(dim), false);
-
+
for (auto&& vertex : vertices(gridView))
- neumannVertices[indexSet.index(vertex)] = isNeumann(vertex.geometry().corner(0));
+ neumannVertices[indexSet.index(vertex)] = isNeumann(vertex.geometry().corner(0));
- auto neumannBoundary = std::make_shared<BoundaryPatch<GridType::LeafGridView>>(gridView, neumannVertices);
+ auto neumannBoundary = std::make_shared<BoundaryPatch<GridType::LeafGridView> >(gridView, neumannVertices);
FieldVector<double,dim> values_ = {0,0,0};
auto neumannFunction = [&](FieldVector<double, dim>){
- return values_;
- };
+ return values_;
+ };
// //////////////////////////
// Initial iterate
@@ -197,39 +201,39 @@ int main (int argc, char *argv[])
// ////////////////////////////
GFE::SumEnergy<CompositeBasis, RealTuple<adouble,dim>,Rotation<adouble,dim> > sumEnergy;
- auto neumannEnergy = std::make_shared<GFE::NeumannEnergy<CompositeBasis, RealTuple<adouble,dim>, Rotation<adouble,dim>>>(neumannBoundary,neumannFunction);
- auto bulkCosseratDensity = std::make_shared<GFE::BulkCosseratDensity<adouble,double>>(parameters);
- auto bulkCosseratEnergy = std::make_shared<GFE::LocalIntegralEnergy<CompositeBasis, RealTuple<adouble,dim>, Rotation<adouble,dim>>>(bulkCosseratDensity);
+ auto neumannEnergy = std::make_shared<GFE::NeumannEnergy<CompositeBasis, RealTuple<adouble,dim>, Rotation<adouble,dim> > >(neumannBoundary,neumannFunction);
+ auto bulkCosseratDensity = std::make_shared<GFE::BulkCosseratDensity<adouble,double> >(parameters);
+ auto bulkCosseratEnergy = std::make_shared<GFE::LocalIntegralEnergy<CompositeBasis, RealTuple<adouble,dim>, Rotation<adouble,dim> > >(bulkCosseratDensity);
sumEnergy.addLocalEnergy(bulkCosseratEnergy);
sumEnergy.addLocalEnergy(neumannEnergy);
MixedLocalGFEADOLCStiffness<CompositeBasis,
- RealTuple<double,dim>,
- Rotation<double,dim> > localGFEADOLCStiffness(&sumEnergy);
+ RealTuple<double,dim>,
+ Rotation<double,dim> > localGFEADOLCStiffness(&sumEnergy);
MixedGFEAssembler<CompositeBasis,
- RealTuple<double,dim>,
- Rotation<double,dim> > mixedAssembler(compositeBasis, &localGFEADOLCStiffness);
-
+ RealTuple<double,dim>,
+ Rotation<double,dim> > mixedAssembler(compositeBasis, &localGFEADOLCStiffness);
+
MixedRiemannianTrustRegionSolver<GridType,
- CompositeBasis,
- DeformationFEBasis, RealTuple<double,dim>,
- OrientationFEBasis, Rotation<double,dim> > solver;
+ CompositeBasis,
+ DeformationFEBasis, RealTuple<double,dim>,
+ OrientationFEBasis, Rotation<double,dim> > solver;
solver.setup(*grid,
- &mixedAssembler,
- deformationFEBasis,
- orientationFEBasis,
- x,
- deformationDirichletDofs,
- orientationDirichletDofs,
- tolerance,
- maxSolverSteps,
- initialTrustRegionRadius,
- multigridIterations,
- mgTolerance,
- 3, 3, 1, // Multigrid V-cycle
- baseIterations,
- baseTolerance,
- false);
+ &mixedAssembler,
+ deformationFEBasis,
+ orientationFEBasis,
+ x,
+ deformationDirichletDofs,
+ orientationDirichletDofs,
+ tolerance,
+ maxSolverSteps,
+ initialTrustRegionRadius,
+ multigridIterations,
+ mgTolerance,
+ 3, 3, 1, // Multigrid V-cycle
+ baseIterations,
+ baseTolerance,
+ false);
solver.setInitialIterate(x);
solver.solve();
@@ -243,17 +247,17 @@ int main (int argc, char *argv[])
if (solver.getStatistics().finalIteration != expectedFinalIteration)
{
- std::cerr << "Trust-region solver did " << solver.getStatistics().finalIteration+1
- << " iterations, instead of the expected '" << expectedFinalIteration+1 << "'!" << std::endl;
- return 1;
+ std::cerr << "Trust-region solver did " << solver.getStatistics().finalIteration+1
+ << " iterations, instead of the expected '" << expectedFinalIteration+1 << "'!" << std::endl;
+ return 1;
}
if ( std::abs(solver.getStatistics().finalEnergy - expectedEnergy) > 1e-7)
{
- std::cerr << std::setprecision(9);
- std::cerr << "Final energy is " << solver.getStatistics().finalEnergy
- << " but '" << expectedEnergy << "' was expected!" << std::endl;
- return 1;
+ std::cerr << std::setprecision(9);
+ std::cerr << "Final energy is " << solver.getStatistics().finalEnergy
+ << " but '" << expectedEnergy << "' was expected!" << std::endl;
+ return 1;
}
return 0;
diff --git a/test/cosseratenergytest.cc b/test/cosseratenergytest.cc
index 85fc3b25..f9348a2f 100644
--- a/test/cosseratenergytest.cc
+++ b/test/cosseratenergytest.cc
@@ -25,24 +25,24 @@ using namespace Dune;
template <class GridType>
std::unique_ptr<GridType> makeSingleSimplexGrid()
{
- static const int domainDim = GridType::dimension;
- GridFactory<GridType> factory;
+ static const int domainDim = GridType::dimension;
+ GridFactory<GridType> factory;
- FieldVector<double,domainDim> pos(0);
- factory.insertVertex(pos);
+ FieldVector<double,domainDim> pos(0);
+ factory.insertVertex(pos);
- for (int i=0; i<domainDim; i++) {
- pos = 0;
- pos[i] = 1;
- factory.insertVertex(pos);
- }
+ for (int i=0; i<domainDim; i++) {
+ pos = 0;
+ pos[i] = 1;
+ factory.insertVertex(pos);
+ }
- std::vector<unsigned int> v(domainDim+1);
- for (int i=0; i<domainDim+1; i++)
- v[i] = i;
- factory.insertElement(GeometryTypes::simplex(domainDim), v);
+ std::vector<unsigned int> v(domainDim+1);
+ for (int i=0; i<domainDim+1; i++)
+ v[i] = i;
+ factory.insertElement(GeometryTypes::simplex(domainDim), v);
- return factory.createGrid();
+ return factory.createGrid();
}
@@ -53,121 +53,121 @@ std::unique_ptr<GridType> makeSingleSimplexGrid()
template <class GridType>
void testEnergy(const GridType* grid, const std::vector<TargetSpace>& coefficients)
{
- ParameterTree materialParameters;
- materialParameters["thickness"] = "0.1";
- materialParameters["mu"] = "3.8462e+05";
- materialParameters["lambda"] = "2.7149e+05";
- materialParameters["mu_c"] = "3.8462e+05";
- materialParameters["L_c"] = "0.1";
- materialParameters["q"] = "2.5";
- materialParameters["kappa"] = "0.1";
- materialParameters["b1"] = "1";
- materialParameters["b2"] = "1";
- materialParameters["b3"] = "1";
-
- typedef Dune::Functions::LagrangeBasis<typename GridType::LeafGridView,1> FEBasis;
- FEBasis feBasis(grid->leafGridView());
-
- CosseratEnergyLocalStiffness<FEBasis,3> assembler(materialParameters,
- nullptr,
- nullptr,
- nullptr);
-
- // compute reference energy
- auto localView = feBasis.localView();
- localView.bind(*grid->leafGridView().template begin<0>());
-
- double referenceEnergy = assembler.energy(localView,
- coefficients);
-
- // rotate the entire configuration
- std::vector<TargetSpace> rotatedCoefficients(coefficients.size());
-
- std::vector<Rotation<double,3> > testRotations;
- ValueFactory<Rotation<double,3> >::get(testRotations);
-
- for (size_t i=0; i<testRotations.size(); i++) {
-
- /////////////////////////////////////////////////////////////////////////
- // Multiply the given configuration by the test rotation.
- // The energy should remain unchanged.
- /////////////////////////////////////////////////////////////////////////
- FieldMatrix<double,3,3> matrix;
- testRotations[i].matrix(matrix);
-
- for (size_t j=0; j<coefficients.size(); j++) {
- FieldVector<double,3> tmp;
- matrix.mv(coefficients[j].r, tmp);
- rotatedCoefficients[j].r = tmp;
-
- rotatedCoefficients[j].q = testRotations[i].mult(coefficients[j].q);
- }
-
- double energy = assembler.energy(localView,
- rotatedCoefficients);
- assert(std::fabs(energy-referenceEnergy)/std::fabs(energy) < 1e-4);
-
+ ParameterTree materialParameters;
+ materialParameters["thickness"] = "0.1";
+ materialParameters["mu"] = "3.8462e+05";
+ materialParameters["lambda"] = "2.7149e+05";
+ materialParameters["mu_c"] = "3.8462e+05";
+ materialParameters["L_c"] = "0.1";
+ materialParameters["q"] = "2.5";
+ materialParameters["kappa"] = "0.1";
+ materialParameters["b1"] = "1";
+ materialParameters["b2"] = "1";
+ materialParameters["b3"] = "1";
+
+ typedef Dune::Functions::LagrangeBasis<typename GridType::LeafGridView,1> FEBasis;
+ FEBasis feBasis(grid->leafGridView());
+
+ CosseratEnergyLocalStiffness<FEBasis,3> assembler(materialParameters,
+ nullptr,
+ nullptr,
+ nullptr);
+
+ // compute reference energy
+ auto localView = feBasis.localView();
+ localView.bind(*grid->leafGridView().template begin<0>());
+
+ double referenceEnergy = assembler.energy(localView,
+ coefficients);
+
+ // rotate the entire configuration
+ std::vector<TargetSpace> rotatedCoefficients(coefficients.size());
+
+ std::vector<Rotation<double,3> > testRotations;
+ ValueFactory<Rotation<double,3> >::get(testRotations);
+
+ for (size_t i=0; i<testRotations.size(); i++) {
+
+ /////////////////////////////////////////////////////////////////////////
+ // Multiply the given configuration by the test rotation.
+ // The energy should remain unchanged.
+ /////////////////////////////////////////////////////////////////////////
+ FieldMatrix<double,3,3> matrix;
+ testRotations[i].matrix(matrix);
+
+ for (size_t j=0; j<coefficients.size(); j++) {
+ FieldVector<double,3> tmp;
+ matrix.mv(coefficients[j].r, tmp);
+ rotatedCoefficients[j].r = tmp;
+
+ rotatedCoefficients[j].q = testRotations[i].mult(coefficients[j].q);
}
+ double energy = assembler.energy(localView,
+ rotatedCoefficients);
+ assert(std::fabs(energy-referenceEnergy)/std::fabs(energy) < 1e-4);
+
+ }
+
}
template <int domainDim>
void testFrameInvariance()
{
- std::cout << " --- Testing frame invariance of the Cosserat energy, domain dimension: " << domainDim << " ---" << std::endl;
+ std::cout << " --- Testing frame invariance of the Cosserat energy, domain dimension: " << domainDim << " ---" << std::endl;
- // ////////////////////////////////////////////////////////
- // Make a test grid consisting of a single simplex
- // ////////////////////////////////////////////////////////
+ // ////////////////////////////////////////////////////////
+ // Make a test grid consisting of a single simplex
+ // ////////////////////////////////////////////////////////
- typedef UGGrid<domainDim> GridType;
- const std::unique_ptr<GridType> grid = makeSingleSimplexGrid<GridType>();
-
- // //////////////////////////////////////////////////////////
- // Test whether the energy is invariant under isometries
- // //////////////////////////////////////////////////////////
+ typedef UGGrid<domainDim> GridType;
+ const std::unique_ptr<GridType> grid = makeSingleSimplexGrid<GridType>();
- std::vector<TargetSpace> testPoints;
- ValueFactory<TargetSpace>::get(testPoints);
+ // //////////////////////////////////////////////////////////
+ // Test whether the energy is invariant under isometries
+ // //////////////////////////////////////////////////////////
- // Set up elements of SE(3)
- std::vector<TargetSpace> coefficients(domainDim+1);
+ std::vector<TargetSpace> testPoints;
+ ValueFactory<TargetSpace>::get(testPoints);
- ::MultiIndex index(domainDim+1, testPoints.size());
- int numIndices = index.cycle();
+ // Set up elements of SE(3)
+ std::vector<TargetSpace> coefficients(domainDim+1);
- for (int i=0; i<numIndices; i++, ++index) {
-
- // Discard all configurations that deform the element to zero area
- bool identicalPoints = false;
- for (int j=0; j<domainDim+1; j++)
- for (int k=0; k<domainDim+1; k++)
- if (j!=k and (testPoints[index[j]].r - testPoints[index[k]].r).two_norm() < 1e-5)
- identicalPoints = true;
+ ::MultiIndex index(domainDim+1, testPoints.size());
+ int numIndices = index.cycle();
- if (identicalPoints)
- continue;
+ for (int i=0; i<numIndices; i++, ++index) {
- for (int j=0; j<domainDim+1; j++)
- coefficients[j] = testPoints[index[j]];
+ // Discard all configurations that deform the element to zero area
+ bool identicalPoints = false;
+ for (int j=0; j<domainDim+1; j++)
+ for (int k=0; k<domainDim+1; k++)
+ if (j!=k and (testPoints[index[j]].r - testPoints[index[k]].r).two_norm() < 1e-5)
+ identicalPoints = true;
+
+ if (identicalPoints)
+ continue;
+
+ for (int j=0; j<domainDim+1; j++)
+ coefficients[j] = testPoints[index[j]];
+
+ testEnergy<GridType>(grid.get(), coefficients);
+
+ }
- testEnergy<GridType>(grid.get(), coefficients);
-
- }
-
}
int main(int argc, char** argv)
{
- MPIHelper::instance(argc, argv);
+ MPIHelper::instance(argc, argv);
+
+ const int domainDim = 2;
- const int domainDim = 2;
+ //////////////////////////////////////////////////////////////////////////////////////
+ // Test invariance of the energy functional under rotations
+ //////////////////////////////////////////////////////////////////////////////////////
- //////////////////////////////////////////////////////////////////////////////////////
- // Test invariance of the energy functional under rotations
- //////////////////////////////////////////////////////////////////////////////////////
-
- testFrameInvariance<domainDim>();
+ testFrameInvariance<domainDim>();
}
diff --git a/test/cosseratrodenergytest.cc b/test/cosseratrodenergytest.cc
index 1430f72d..95cbc183 100644
--- a/test/cosseratrodenergytest.cc
+++ b/test/cosseratrodenergytest.cc
@@ -14,95 +14,96 @@ using namespace Dune;
int main (int argc, char *argv[]) try
{
- // Some types that I need
- typedef std::vector<RigidBodyMotion<double,3> > SolutionType;
+ // Some types that I need
+ typedef std::vector<RigidBodyMotion<double,3> > SolutionType;
- // Problem settings
- const int numRodBaseElements = 100;
-
- // ///////////////////////////////////////
- // Create the grid
- // ///////////////////////////////////////
- typedef OneDGrid GridType;
- GridType grid(numRodBaseElements, 0, 1);
- using GridView = GridType::LeafGridView;
- GridView gridView = grid.leafGridView();
+ // Problem settings
+ const int numRodBaseElements = 100;
- using FEBasis = Functions::LagrangeBasis<GridView,1>;
- FEBasis feBasis(gridView);
+ // ///////////////////////////////////////
+ // Create the grid
+ // ///////////////////////////////////////
+ typedef OneDGrid GridType;
+ GridType grid(numRodBaseElements, 0, 1);
+ using GridView = GridType::LeafGridView;
+ GridView gridView = grid.leafGridView();
- SolutionType x(feBasis.size());
+ using FEBasis = Functions::LagrangeBasis<GridView,1>;
+ FEBasis feBasis(gridView);
- // //////////////////////////
- // Initial solution
- // //////////////////////////
+ SolutionType x(feBasis.size());
- for (size_t i=0; i<x.size(); i++)
- {
- double s = double(i)/(x.size()-1);
- x[i].r[0] = 0.1*std::cos(2*M_PI*s);
- x[i].r[1] = 0.1*std::sin(2*M_PI*s);
- x[i].r[2] = s;
- x[i].q = Rotation<double,3>::identity();
- //x[i].q = Quaternion<double>(zAxis, (double(i)*M_PI)/(2*(x.size()-1)) );
- }
+ // //////////////////////////
+ // Initial solution
+ // //////////////////////////
- FieldVector<double,3> zAxis(0); zAxis[2]=1;
- x.back().q = Rotation<double,3>(zAxis, M_PI/4);
+ for (size_t i=0; i<x.size(); i++)
+ {
+ double s = double(i)/(x.size()-1);
+ x[i].r[0] = 0.1*std::cos(2*M_PI*s);
+ x[i].r[1] = 0.1*std::sin(2*M_PI*s);
+ x[i].r[2] = s;
+ x[i].q = Rotation<double,3>::identity();
+ //x[i].q = Quaternion<double>(zAxis, (double(i)*M_PI)/(2*(x.size()-1)) );
+ }
- // /////////////////////////////////////////////////////////////////////
- // Create a second, rotated copy of the configuration
- // /////////////////////////////////////////////////////////////////////
+ FieldVector<double,3> zAxis(0); zAxis[2]=1;
+ x.back().q = Rotation<double,3>(zAxis, M_PI/4);
- FieldVector<double,3> displacement {0, 1, 0};
+ // /////////////////////////////////////////////////////////////////////
+ // Create a second, rotated copy of the configuration
+ // /////////////////////////////////////////////////////////////////////
- FieldVector<double,3> axis = {1,0,0};
- Rotation<double,3> rotation(axis,M_PI/2);
+ FieldVector<double,3> displacement {0, 1, 0};
- SolutionType rotatedX = x;
+ FieldVector<double,3> axis = {1,0,0};
+ Rotation<double,3> rotation(axis,M_PI/2);
- for (size_t i=0; i<rotatedX.size(); i++)
- {
- rotatedX[i].r = rotation.rotate(x[i].r);
- rotatedX[i].r += displacement;
+ SolutionType rotatedX = x;
- rotatedX[i].q = rotation.mult(x[i].q);
- }
+ for (size_t i=0; i<rotatedX.size(); i++)
+ {
+ rotatedX[i].r = rotation.rotate(x[i].r);
+ rotatedX[i].r += displacement;
- using GeodesicInterpolationRule = LocalGeodesicFEFunction<1, double,
- FEBasis::LocalView::Tree::FiniteElement,
- RigidBodyMotion<double,3> >;
+ rotatedX[i].q = rotation.mult(x[i].q);
+ }
- GFE::CosseratRodEnergy<FEBasis,
- GeodesicInterpolationRule,
- double> localRodEnergy(gridView,
- 1,1,1,1e6,0.3);
+ using GeodesicInterpolationRule = LocalGeodesicFEFunction<1, double,
+ FEBasis::LocalView::Tree::FiniteElement,
+ RigidBodyMotion<double,3> >;
- std::vector<RigidBodyMotion<double,3> > referenceConfiguration(gridView.size(1));
+ GFE::CosseratRodEnergy<FEBasis,
+ GeodesicInterpolationRule,
+ double> localRodEnergy(gridView,
+ 1,1,1,1e6,0.3);
- for (const auto& vertex : vertices(gridView))
- {
- auto idx = gridView.indexSet().index(vertex);
+ std::vector<RigidBodyMotion<double,3> > referenceConfiguration(gridView.size(1));
- referenceConfiguration[idx].r[0] = 0;
- referenceConfiguration[idx].r[1] = 0;
- referenceConfiguration[idx].r[2] = vertex.geometry().corner(0)[0];
- referenceConfiguration[idx].q = Rotation<double,3>::identity();
- }
+ for (const auto& vertex : vertices(gridView))
+ {
+ auto idx = gridView.indexSet().index(vertex);
- localRodEnergy.setReferenceConfiguration(referenceConfiguration);
+ referenceConfiguration[idx].r[0] = 0;
+ referenceConfiguration[idx].r[1] = 0;
+ referenceConfiguration[idx].r[2] = vertex.geometry().corner(0)[0];
+ referenceConfiguration[idx].q = Rotation<double,3>::identity();
+ }
- auto localView = feBasis.localView();
- localView.bind(*gridView.begin<0>());
+ localRodEnergy.setReferenceConfiguration(referenceConfiguration);
- SolutionType localX = {x[0], x[1]};
- SolutionType localRotatedX = {rotatedX[0], rotatedX[1]};
+ auto localView = feBasis.localView();
+ localView.bind(*gridView.begin<0>());
- if (std::abs(localRodEnergy.energy(localView, localX) - localRodEnergy.energy(localView, localRotatedX)) > 1e-6)
- DUNE_THROW(Dune::Exception, "Rod energy not invariant under rigid body motions!");
+ SolutionType localX = {x[0], x[1]};
+ SolutionType localRotatedX = {rotatedX[0], rotatedX[1]};
- } catch (Exception& e) {
+ if (std::abs(localRodEnergy.energy(localView, localX) - localRodEnergy.energy(localView, localRotatedX)) > 1e-6)
+ DUNE_THROW(Dune::Exception, "Rod energy not invariant under rigid body motions!");
- std::cout << e.what() << std::endl;
+}
+catch (Exception& e) {
- }
+ std::cout << e.what() << std::endl;
+
+}
diff --git a/test/cosseratrodtest.cc b/test/cosseratrodtest.cc
index 6347ecca..59fc5a58 100644
--- a/test/cosseratrodtest.cc
+++ b/test/cosseratrodtest.cc
@@ -64,7 +64,9 @@ int main (int argc, char *argv[]) try
std::vector<double> referenceConfigurationX(scalarBasis.size());
- auto identity = [](const FieldVector<double,1>& x) { return x; };
+ auto identity = [](const FieldVector<double,1>& x) {
+ return x;
+ };
Functions::interpolate(scalarBasis, referenceConfigurationX, identity);
@@ -94,7 +96,7 @@ int main (int argc, char *argv[]) try
power<TargetSpace::TangentVector::dimension>(
lagrange<order>(),
blockedInterleaved()
- ));
+ ));
// Find all boundary dofs
BoundaryPatch<GridView> dirichletBoundary(gridView,
@@ -135,14 +137,14 @@ int main (int argc, char *argv[]) try
if (interpolationMethod == "geodesic")
{
auto energy = std::make_shared<GFE::CosseratRodEnergy<ScalarBasis, GeodesicInterpolationRule, adouble> >(gridView,
- A, J1, J2, E, nu);
+ A, J1, J2, E, nu);
energy->setReferenceConfiguration(referenceConfiguration);
localRodEnergy = energy;
}
else if (interpolationMethod == "projected")
{
auto energy = std::make_shared<GFE::CosseratRodEnergy<ScalarBasis, ProjectedInterpolationRule, adouble> >(gridView,
- A, J1, J2, E, nu);
+ A, J1, J2, E, nu);
energy->setReferenceConfiguration(referenceConfiguration);
localRodEnergy = energy;
}
@@ -150,7 +152,7 @@ int main (int argc, char *argv[]) try
DUNE_THROW(Exception, "Unknown interpolation method " << interpolationMethod << " requested!");
LocalGeodesicFEADOLCStiffness<ScalarBasis,
- TargetSpace> localStiffness(localRodEnergy.get());
+ TargetSpace> localStiffness(localRodEnergy.get());
GeodesicFEAssembler<ScalarBasis,TargetSpace> rodAssembler(gridView, localStiffness);
@@ -182,7 +184,7 @@ int main (int argc, char *argv[]) try
solver.solve();
x = solver.getSol();
-
+
std::size_t expectedFinalIteration = 4;
if (solver.getStatistics().finalIteration != expectedFinalIteration)
{
@@ -200,7 +202,8 @@ int main (int argc, char *argv[]) try
return 1;
}
-} catch (Exception& e)
+}
+catch (Exception& e)
{
- std::cout << e.what() << std::endl;
+ std::cout << e.what() << std::endl;
}
diff --git a/test/geodesicfeassemblerwrappertest.cc b/test/geodesicfeassemblerwrappertest.cc
index 737e5d25..ae08c341 100644
--- a/test/geodesicfeassemblerwrappertest.cc
+++ b/test/geodesicfeassemblerwrappertest.cc
@@ -53,14 +53,14 @@ using namespace Indices;
using ValueType = adouble;
//Types for the mixed space
-using DisplacementVector = std::vector<RealTuple<double,dim>>;
-using RotationVector = std::vector<Rotation<double,dim>>;
+using DisplacementVector = std::vector<RealTuple<double,dim> >;
+using RotationVector = std::vector<Rotation<double,dim> >;
using Vector = TupleVector<DisplacementVector, RotationVector>;
const int dimCR = Rotation<double,dim>::TangentVector::dimension; //dimCorrectionRotation = Dimension of the correction for rotations
-using CorrectionType = MultiTypeBlockVector<BlockVector<FieldVector<double,dim> >, BlockVector<FieldVector<double,dimCR>>>;
+using CorrectionType = MultiTypeBlockVector<BlockVector<FieldVector<double,dim> >, BlockVector<FieldVector<double,dimCR> > >;
-using MatrixRow0 = MultiTypeBlockVector<BCRSMatrix<FieldMatrix<double,dim,dim>>, BCRSMatrix<FieldMatrix<double,dim,dimCR>>>;
-using MatrixRow1 = MultiTypeBlockVector<BCRSMatrix<FieldMatrix<double,dimCR,dim>>, BCRSMatrix<FieldMatrix<double,dimCR,dimCR>>>;
+using MatrixRow0 = MultiTypeBlockVector<BCRSMatrix<FieldMatrix<double,dim,dim> >, BCRSMatrix<FieldMatrix<double,dim,dimCR> > >;
+using MatrixRow1 = MultiTypeBlockVector<BCRSMatrix<FieldMatrix<double,dimCR,dim> >, BCRSMatrix<FieldMatrix<double,dimCR,dimCR> > >;
using MatrixType = MultiTypeBlockMatrix<MatrixRow0,MatrixRow1>;
//Types for the Non-mixed space
@@ -85,14 +85,14 @@ int main (int argc, char *argv[])
GridView gridView = grid->leafGridView();
std::function<bool(FieldVector<double,gridDim>)> isNeumann = [](FieldVector<double,gridDim> coordinate) {
- return coordinate[0] > 0.99;
- };
+ return coordinate[0] > 0.99;
+ };
BitSetVector<1> neumannVertices(gridView.size(gridDim), false);
const GridView::IndexSet& indexSet = gridView.indexSet();
-
+
for (auto&& vertex : vertices(gridView))
- neumannVertices[indexSet.index(vertex)] = isNeumann(vertex.geometry().corner(0));
+ neumannVertices[indexSet.index(vertex)] = isNeumann(vertex.geometry().corner(0));
BoundaryPatch<GridView> neumannBoundary(gridView, neumannVertices);
@@ -108,11 +108,11 @@ int main (int argc, char *argv[])
composite(
power<dim>(
lagrange<displacementOrder>()
- ),
+ ),
power<dim>(
lagrange<rotationOrder>()
- )
- ));
+ )
+ ));
using CompositeBasis = decltype(compositeBasis);
@@ -136,36 +136,38 @@ int main (int argc, char *argv[])
FieldVector<double,dim> values_ = {3e4,2e4,1e4};
auto neumannFunction = [&](FieldVector<double, gridDim>){
- return values_;
- };
+ return values_;
+ };
CosseratEnergyLocalStiffness<decltype(compositeBasis), dim,adouble> cosseratEnergy(parameters,
- &neumannBoundary,
- neumannFunction,
- nullptr);
+ &neumannBoundary,
+ neumannFunction,
+ nullptr);
MixedLocalGFEADOLCStiffness<CompositeBasis,
- RealTuple<double,dim>,
- Rotation<double,dim> > mixedLocalGFEADOLCStiffness(&cosseratEnergy);
+ RealTuple<double,dim>,
+ Rotation<double,dim> > mixedLocalGFEADOLCStiffness(&cosseratEnergy);
MixedGFEAssembler<CompositeBasis,
- RealTuple<double,dim>,
- Rotation<double,dim> > mixedAssembler(compositeBasis, &mixedLocalGFEADOLCStiffness);
+ RealTuple<double,dim>,
+ Rotation<double,dim> > mixedAssembler(compositeBasis, &mixedLocalGFEADOLCStiffness);
using RBM = RigidBodyMotion<double, dim>;
using DeformationFEBasis = Functions::LagrangeBasis<GridView,displacementOrder>;
DeformationFEBasis deformationFEBasis(gridView);
- using GFEAssemblerWrapper = GFE::GeodesicFEAssemblerWrapper<CompositeBasis, DeformationFEBasis, RBM, RealTuple<double, dim>, Rotation<double,dim>>;
+ using GFEAssemblerWrapper = GFE::GeodesicFEAssemblerWrapper<CompositeBasis, DeformationFEBasis, RBM, RealTuple<double, dim>, Rotation<double,dim> >;
GFEAssemblerWrapper assembler(&mixedAssembler, deformationFEBasis);
-
+
/////////////////////////////////////////////////////////////////////////
// Prepare the iterate x where we want to assemble - identity in 2D with z = 0
- /////////////////////////////////////////////////////////////////////////
+ /////////////////////////////////////////////////////////////////////////
auto deformationPowerBasis = makeBasis(
gridView,
power<gridDim>(
- lagrange<displacementOrder>()
- ));
+ lagrange<displacementOrder>()
+ ));
BlockVector<FieldVector<double,gridDim> > identity(compositeBasis.size({0}));
- Functions::interpolate(deformationPowerBasis, identity, [](FieldVector<double,gridDim> x){ return x; });
+ Functions::interpolate(deformationPowerBasis, identity, [](FieldVector<double,gridDim> x){
+ return x;
+ });
BlockVector<FieldVector<double,dim> > initialDeformation(compositeBasis.size({0}));
initialDeformation = 0;
@@ -184,7 +186,7 @@ int main (int argc, char *argv[])
}
//////////////////////////////////////////////////////////////////////////////
- // Compute the energy, assemble the Gradient and Hessian using
+ // Compute the energy, assemble the Gradient and Hessian using
// the GeodesicFEAssemblerWrapper and the MixedGFEAssembler and compare!
//////////////////////////////////////////////////////////////////////////////
CorrectionTypeWrapped gradient;
@@ -207,27 +209,27 @@ int main (int argc, char *argv[])
if (std::abs(energy - energyMixed)/energyMixed > 1e-8)
{
- std::cerr << std::setprecision(9);
- std::cerr << "The energy calculated by the GeodesicFEAssemblerWrapper is " << energy << " but "
- << energyMixed << " (calculated by the MixedGFEAssembler) was expected!" << std::endl;
- return 1;
+ std::cerr << std::setprecision(9);
+ std::cerr << "The energy calculated by the GeodesicFEAssemblerWrapper is " << energy << " but "
+ << energyMixed << " (calculated by the MixedGFEAssembler) was expected!" << std::endl;
+ return 1;
}
if ( std::abs(gradientTwoNorm - gradientMixedTwoNorm)/gradientMixedTwoNorm > 1e-8 ||
std::abs(gradientInfinityNorm - gradientMixedInfinityNorm)/gradientMixedInfinityNorm > 1e-8)
{
- std::cerr << std::setprecision(9);
- std::cerr << "The gradient infinity norm calculated by the GeodesicFEAssemblerWrapper is " << gradientInfinityNorm << " but "
- << gradientMixedInfinityNorm << " (calculated by the MixedGFEAssembler) was expected!" << std::endl;
- std::cerr << "The gradient norm calculated by the GeodesicFEAssemblerWrapper is " << gradientTwoNorm << " but "
- << gradientMixedTwoNorm << " (calculated by the MixedGFEAssembler) was expected!" << std::endl;
- return 1;
+ std::cerr << std::setprecision(9);
+ std::cerr << "The gradient infinity norm calculated by the GeodesicFEAssemblerWrapper is " << gradientInfinityNorm << " but "
+ << gradientMixedInfinityNorm << " (calculated by the MixedGFEAssembler) was expected!" << std::endl;
+ std::cerr << "The gradient norm calculated by the GeodesicFEAssemblerWrapper is " << gradientTwoNorm << " but "
+ << gradientMixedTwoNorm << " (calculated by the MixedGFEAssembler) was expected!" << std::endl;
+ return 1;
}
if (std::abs(matrixFrobeniusNorm - matrixMixedFrobeniusNorm)/matrixMixedFrobeniusNorm > 1e-8)
{
- std::cerr << std::setprecision(9);
- std::cerr << "The matrix norm calculated by the GeodesicFEAssemblerWrapper is " << matrixFrobeniusNorm << " but "
- << matrixMixedFrobeniusNorm << " (calculated by the MixedGFEAssembler) was expected!" << std::endl;
- return 1;
+ std::cerr << std::setprecision(9);
+ std::cerr << "The matrix norm calculated by the GeodesicFEAssemblerWrapper is " << matrixFrobeniusNorm << " but "
+ << matrixMixedFrobeniusNorm << " (calculated by the MixedGFEAssembler) was expected!" << std::endl;
+ return 1;
}
}
diff --git a/test/harmonicenergytest.cc b/test/harmonicenergytest.cc
index 6ed8ca93..bdfa68df 100644
--- a/test/harmonicenergytest.cc
+++ b/test/harmonicenergytest.cc
@@ -19,43 +19,43 @@ using namespace Dune;
template <class TargetSpace>
double diameter(const std::vector<TargetSpace>& v)
{
- double d = 0;
- for (size_t i=0; i<v.size(); i++)
- for (size_t j=0; j<v.size(); j++)
- d = std::max(d, TargetSpace::distance(v[i],v[j]));
- return d;
+ double d = 0;
+ for (size_t i=0; i<v.size(); i++)
+ for (size_t j=0; j<v.size(); j++)
+ d = std::max(d, TargetSpace::distance(v[i],v[j]));
+ return d;
}
template <class Basis, class TargetSpace>
void testEnergy(const Basis& basis, const std::vector<TargetSpace>& coefficients)
{
- using GridView = typename Basis::GridView;
- GridView gridView = basis.gridView();
+ using GridView = typename Basis::GridView;
+ GridView gridView = basis.gridView();
- using GeodesicInterpolationRule = LocalGeodesicFEFunction<Basis::GridView::dimension, double, typename Basis::LocalView::Tree::FiniteElement, TargetSpace>;
+ using GeodesicInterpolationRule = LocalGeodesicFEFunction<Basis::GridView::dimension, double, typename Basis::LocalView::Tree::FiniteElement, TargetSpace>;
- HarmonicEnergy<Basis,GeodesicInterpolationRule,TargetSpace> assembler;
- std::vector<TargetSpace> rotatedCoefficients(coefficients.size());
+ HarmonicEnergy<Basis,GeodesicInterpolationRule,TargetSpace> assembler;
+ std::vector<TargetSpace> rotatedCoefficients(coefficients.size());
- auto localView = basis.localView();
- localView.bind(*gridView.template begin<0>());
+ auto localView = basis.localView();
+ localView.bind(*gridView.template begin<0>());
- for (int i=0; i<10; i++) {
+ for (int i=0; i<10; i++) {
- Rotation<double,3> rotation(FieldVector<double,3>(1), double(i));
+ Rotation<double,3> rotation(FieldVector<double,3>(1), double(i));
- FieldMatrix<double,3,3> matrix;
- rotation.matrix(matrix);
- for (size_t j=0; j<coefficients.size(); j++) {
- FieldVector<double,3> tmp;
- matrix.mv(coefficients[j].globalCoordinates(), tmp);
- rotatedCoefficients[j] = tmp;
- }
+ FieldMatrix<double,3,3> matrix;
+ rotation.matrix(matrix);
+ for (size_t j=0; j<coefficients.size(); j++) {
+ FieldVector<double,3> tmp;
+ matrix.mv(coefficients[j].globalCoordinates(), tmp);
+ rotatedCoefficients[j] = tmp;
+ }
- std::cout << "energy: " << assembler.energy(localView,
- rotatedCoefficients) << std::endl;
+ std::cout << "energy: " << assembler.energy(localView,
+ rotatedCoefficients) << std::endl;
- }
+ }
}
@@ -63,68 +63,68 @@ void testEnergy(const Basis& basis, const std::vector<TargetSpace>& coefficients
template <int domainDim, class TargetSpace>
void test()
{
- // ////////////////////////////////////////////////////////
- // Make a test grid consisting of a single simplex
- // ////////////////////////////////////////////////////////
+ // ////////////////////////////////////////////////////////
+ // Make a test grid consisting of a single simplex
+ // ////////////////////////////////////////////////////////
+
+ typedef UGGrid<domainDim> GridType;
- typedef UGGrid<domainDim> GridType;
+ GridFactory<GridType> factory;
- GridFactory<GridType> factory;
+ FieldVector<double,domainDim> pos(0);
+ factory.insertVertex(pos);
- FieldVector<double,domainDim> pos(0);
+ for (int i=0; i<domainDim; i++) {
+ pos = 0;
+ pos[i] = 1;
factory.insertVertex(pos);
+ }
- for (int i=0; i<domainDim; i++) {
- pos = 0;
- pos[i] = 1;
- factory.insertVertex(pos);
- }
+ std::vector<unsigned int> v(domainDim+1);
+ for (int i=0; i<domainDim+1; i++)
+ v[i] = i;
+ factory.insertElement(GeometryTypes::simplex(domainDim), v);
- std::vector<unsigned int> v(domainDim+1);
- for (int i=0; i<domainDim+1; i++)
- v[i] = i;
- factory.insertElement(GeometryTypes::simplex(domainDim), v);
+ auto grid = std::unique_ptr<const GridType>(factory.createGrid());
+ using GridView = typename GridType::LeafGridView;
+ auto gridView = grid->leafGridView();
- auto grid = std::unique_ptr<const GridType>(factory.createGrid());
- using GridView = typename GridType::LeafGridView;
- auto gridView = grid->leafGridView();
+ // A function space basis
+ using Basis = Functions::LagrangeBasis<GridView,1>;
+ Basis basis(gridView);
- // A function space basis
- using Basis = Functions::LagrangeBasis<GridView,1>;
- Basis basis(gridView);
+ // //////////////////////////////////////////////////////////
+ // Test whether the energy is invariant under isometries
+ // //////////////////////////////////////////////////////////
- // //////////////////////////////////////////////////////////
- // Test whether the energy is invariant under isometries
- // //////////////////////////////////////////////////////////
+ std::vector<TargetSpace> testPoints;
+ ValueFactory<TargetSpace>::get(testPoints);
- std::vector<TargetSpace> testPoints;
- ValueFactory<TargetSpace>::get(testPoints);
+ // Set up elements of S^2
+ std::vector<TargetSpace> coefficients(domainDim+1);
- // Set up elements of S^2
- std::vector<TargetSpace> coefficients(domainDim+1);
+ ::MultiIndex index(domainDim+1, testPoints.size());
+ int numIndices = index.cycle();
- ::MultiIndex index(domainDim+1, testPoints.size());
- int numIndices = index.cycle();
+ for (int i=0; i<numIndices; i++, ++index) {
- for (int i=0; i<numIndices; i++, ++index) {
-
- for (int j=0; j<domainDim+1; j++)
- coefficients[j] = testPoints[index[j]];
+ for (int j=0; j<domainDim+1; j++)
+ coefficients[j] = testPoints[index[j]];
- // This may be overly restrictive, but see the TODO in targetspacetrsolver.cc
- if (diameter(coefficients) > TargetSpace::convexityRadius)
- continue;
+ // This may be overly restrictive, but see the TODO in targetspacetrsolver.cc
+ if (diameter(coefficients) > TargetSpace::convexityRadius)
+ continue;
- testEnergy<Basis>(basis, coefficients);
-
- }
+ testEnergy<Basis>(basis, coefficients);
+
+ }
}
int main(int argc, char** argv)
{
- MPIHelper::instance(argc, argv);
+ MPIHelper::instance(argc, argv);
- test<2,UnitVector<double,3> >();
+ test<2,UnitVector<double,3> >();
}
diff --git a/test/harmonicmaptest.cc b/test/harmonicmaptest.cc
index bca635fd..34049922 100644
--- a/test/harmonicmaptest.cc
+++ b/test/harmonicmaptest.cc
@@ -88,7 +88,7 @@ int main (int argc, char *argv[])
power<TargetSpace::CoordinateType::dimension>(
lagrange<order>(),
blockedInterleaved()
- ));
+ ));
// A basis for the tangent space
auto tangentBasis = makeBasis(
@@ -96,7 +96,7 @@ int main (int argc, char *argv[])
power<TargetSpace::TangentVector::dimension>(
lagrange<order>(),
blockedInterleaved()
- ));
+ ));
///////////////////////////////////////////
// Determine Dirichlet values
@@ -107,9 +107,9 @@ int main (int argc, char *argv[])
// Make predicate function that computes which vertices are on the Dirichlet boundary,
// based on the vertex positions.
auto dirichletVerticesPredicate = [](FieldVector<double,dim> x)
- {
- return (x[0] < -4.9999 or x[0] > 4.9999 or x[1] < -4.9999 or x[1] > 4.9999);
- };
+ {
+ return (x[0] < -4.9999 or x[0] > 4.9999 or x[1] < -4.9999 or x[1] > 4.9999);
+ };
for (auto&& vertex : vertices(gridView))
{
@@ -127,10 +127,10 @@ int main (int argc, char *argv[])
// The inverse stereographic projection through the north pole
auto initialIterateFunction = [](FieldVector<double,dim> x) -> TargetSpace::CoordinateType
- {
- auto normSquared = x.two_norm2();
- return {2*x[0] / (normSquared+1), 2*x[1] / (normSquared+1), (normSquared-1)/ (normSquared+1)};
- };
+ {
+ auto normSquared = x.two_norm2();
+ return {2*x[0] / (normSquared+1), 2*x[1] / (normSquared+1), (normSquared-1)/ (normSquared+1)};
+ };
std::vector<TargetSpace::CoordinateType> v;
Dune::Functions::interpolate(powerBasis, v, initialIterateFunction);
@@ -184,18 +184,18 @@ int main (int argc, char *argv[])
std::size_t expectedFinalIteration = 12;
if (solver.getStatistics().finalIteration != expectedFinalIteration)
{
- std::cerr << "Trust-region solver did " << solver.getStatistics().finalIteration+1
- << " iterations, instead of the expected '" << expectedFinalIteration+1 << "'!" << std::endl;
- return 1;
+ std::cerr << "Trust-region solver did " << solver.getStatistics().finalIteration+1
+ << " iterations, instead of the expected '" << expectedFinalIteration+1 << "'!" << std::endl;
+ return 1;
}
double expectedEnergy = 12.2927849;
if ( std::abs(solver.getStatistics().finalEnergy - expectedEnergy) > 1e-7)
{
- std::cerr << std::setprecision(9);
- std::cerr << "Final energy is " << solver.getStatistics().finalEnergy
- << " but '" << expectedEnergy << "' was expected!" << std::endl;
- return 1;
+ std::cerr << std::setprecision(9);
+ std::cerr << "Final energy is " << solver.getStatistics().finalEnergy
+ << " but '" << expectedEnergy << "' was expected!" << std::endl;
+ return 1;
}
return 0;
diff --git a/test/localgeodesicfefunctiontest.cc b/test/localgeodesicfefunctiontest.cc
index 30e052f1..1ff9526d 100644
--- a/test/localgeodesicfefunctiontest.cc
+++ b/test/localgeodesicfefunctiontest.cc
@@ -28,11 +28,11 @@ using namespace Dune;
template <class TargetSpace>
double diameter(const std::vector<TargetSpace>& v)
{
- double d = 0;
- for (size_t i=0; i<v.size(); i++)
- for (size_t j=0; j<v.size(); j++)
- d = std::max(d, TargetSpace::distance(v[i],v[j]));
- return d;
+ double d = 0;
+ for (size_t i=0; i<v.size(); i++)
+ for (size_t j=0; j<v.size(); j++)
+ d = std::max(d, TargetSpace::distance(v[i],v[j]));
+ return d;
}
template <int dim, class ctype, class LocalFunction>
@@ -40,27 +40,27 @@ auto
evaluateDerivativeFD(const LocalFunction& f, const Dune::FieldVector<ctype, dim>& local)
-> decltype(f.evaluateDerivative(local))
{
- double eps = 1e-8;
- //static const int embeddedDim = LocalFunction::TargetSpace::embeddedDim;
- decltype(f.evaluateDerivative(local)) result;
+ double eps = 1e-8;
+ //static const int embeddedDim = LocalFunction::TargetSpace::embeddedDim;
+ decltype(f.evaluateDerivative(local)) result;
- for (int i=0; i<dim; i++) {
+ for (int i=0; i<dim; i++) {
- Dune::FieldVector<ctype, dim> forward = local;
- Dune::FieldVector<ctype, dim> backward = local;
+ Dune::FieldVector<ctype, dim> forward = local;
+ Dune::FieldVector<ctype, dim> backward = local;
- forward[i] += eps;
- backward[i] -= eps;
+ forward[i] += eps;
+ backward[i] -= eps;
- auto fdDer = f.evaluate(forward).globalCoordinates() - f.evaluate(backward).globalCoordinates();
- fdDer /= 2*eps;
+ auto fdDer = f.evaluate(forward).globalCoordinates() - f.evaluate(backward).globalCoordinates();
+ fdDer /= 2*eps;
- for (size_t j=0; j<result.N(); j++)
- result[j][i] = fdDer[j];
+ for (size_t j=0; j<result.N(); j++)
+ result[j][i] = fdDer[j];
- }
+ }
- return result;
+ return result;
}
@@ -70,265 +70,265 @@ evaluateDerivativeFD(const LocalFunction& f, const Dune::FieldVector<ctype, dim>
template <int domainDim, class TargetSpace>
void testPermutationInvariance(const std::vector<TargetSpace>& corners)
{
- // works only for 2d domains
- if (domainDim!=2)
- return;
+ // works only for 2d domains
+ if (domainDim!=2)
+ return;
- LagrangeLocalFiniteElementCache<double,double,domainDim,1> feCache;
- typedef typename LagrangeLocalFiniteElementCache<double,double,domainDim,1>::FiniteElementType LocalFiniteElement;
-
- GeometryType simplex = GeometryTypes::simplex(domainDim);
-
- //
- std::vector<TargetSpace> cornersRotated1(domainDim+1);
- std::vector<TargetSpace> cornersRotated2(domainDim+1);
-
- cornersRotated1[0] = cornersRotated2[2] = corners[1];
- cornersRotated1[1] = cornersRotated2[0] = corners[2];
- cornersRotated1[2] = cornersRotated2[1] = corners[0];
-
- LocalGeodesicFEFunction<2,double,LocalFiniteElement,TargetSpace> f0(feCache.get(simplex), corners);
- LocalGeodesicFEFunction<2,double,LocalFiniteElement,TargetSpace> f1(feCache.get(simplex), cornersRotated1);
- LocalGeodesicFEFunction<2,double,LocalFiniteElement,TargetSpace> f2(feCache.get(simplex), cornersRotated2);
-
- // A quadrature rule as a set of test points
- int quadOrder = 3;
-
- const Dune::QuadratureRule<double, domainDim>& quad
- = Dune::QuadratureRules<double, domainDim>::rule(simplex, quadOrder);
-
- for (size_t pt=0; pt<quad.size(); pt++) {
-
- const Dune::FieldVector<double,domainDim>& quadPos = quad[pt].position();
-
- Dune::FieldVector<double,domainDim> l0 = quadPos;
- Dune::FieldVector<double,domainDim> l1, l2;
-
- l1[0] = quadPos[1];
- l1[1] = 1-quadPos[0]-quadPos[1];
-
- l2[0] = 1-quadPos[0]-quadPos[1];
- l2[1] = quadPos[0];
-
- // evaluate the three functions
- TargetSpace v0 = f0.evaluate(l0);
- TargetSpace v1 = f1.evaluate(l1);
- TargetSpace v2 = f2.evaluate(l2);
-
- // Check that they are all equal
- assert(TargetSpace::distance(v0,v1) < eps);
- assert(TargetSpace::distance(v0,v2) < eps);
+ LagrangeLocalFiniteElementCache<double,double,domainDim,1> feCache;
+ typedef typename LagrangeLocalFiniteElementCache<double,double,domainDim,1>::FiniteElementType LocalFiniteElement;
- }
+ GeometryType simplex = GeometryTypes::simplex(domainDim);
+
+ //
+ std::vector<TargetSpace> cornersRotated1(domainDim+1);
+ std::vector<TargetSpace> cornersRotated2(domainDim+1);
+
+ cornersRotated1[0] = cornersRotated2[2] = corners[1];
+ cornersRotated1[1] = cornersRotated2[0] = corners[2];
+ cornersRotated1[2] = cornersRotated2[1] = corners[0];
+
+ LocalGeodesicFEFunction<2,double,LocalFiniteElement,TargetSpace> f0(feCache.get(simplex), corners);
+ LocalGeodesicFEFunction<2,double,LocalFiniteElement,TargetSpace> f1(feCache.get(simplex), cornersRotated1);
+ LocalGeodesicFEFunction<2,double,LocalFiniteElement,TargetSpace> f2(feCache.get(simplex), cornersRotated2);
+
+ // A quadrature rule as a set of test points
+ int quadOrder = 3;
+
+ const Dune::QuadratureRule<double, domainDim>& quad
+ = Dune::QuadratureRules<double, domainDim>::rule(simplex, quadOrder);
+
+ for (size_t pt=0; pt<quad.size(); pt++) {
+
+ const Dune::FieldVector<double,domainDim>& quadPos = quad[pt].position();
+
+ Dune::FieldVector<double,domainDim> l0 = quadPos;
+ Dune::FieldVector<double,domainDim> l1, l2;
+
+ l1[0] = quadPos[1];
+ l1[1] = 1-quadPos[0]-quadPos[1];
+
+ l2[0] = 1-quadPos[0]-quadPos[1];
+ l2[1] = quadPos[0];
+
+ // evaluate the three functions
+ TargetSpace v0 = f0.evaluate(l0);
+ TargetSpace v1 = f1.evaluate(l1);
+ TargetSpace v2 = f2.evaluate(l2);
+
+ // Check that they are all equal
+ assert(TargetSpace::distance(v0,v1) < eps);
+ assert(TargetSpace::distance(v0,v2) < eps);
+
+ }
}
template <int domainDim, class TargetSpace>
void testDerivative(const LocalGeodesicFEFunction<domainDim,double,typename LagrangeLocalFiniteElementCache<double,double,domainDim,1>::FiniteElementType, TargetSpace>& f)
{
- static const int embeddedDim = TargetSpace::EmbeddedTangentVector::dimension;
-
- // A quadrature rule as a set of test points
- int quadOrder = 3;
-
- const Dune::QuadratureRule<double, domainDim>& quad
- = Dune::QuadratureRules<double, domainDim>::rule(f.type(), quadOrder);
-
- for (size_t pt=0; pt<quad.size(); pt++) {
-
- const Dune::FieldVector<double,domainDim>& quadPos = quad[pt].position();
-
- // evaluate actual derivative
- Dune::FieldMatrix<double, embeddedDim, domainDim> derivative = f.evaluateDerivative(quadPos);
-
- // evaluate fd approximation of derivative
- Dune::FieldMatrix<double, embeddedDim, domainDim> fdDerivative = evaluateDerivativeFD(f,quadPos);
-
- Dune::FieldMatrix<double, embeddedDim, domainDim> diff = derivative;
- diff -= fdDerivative;
-
- if ( diff.infinity_norm() > 100*eps ) {
- std::cout << className<TargetSpace>() << ": Analytical gradient does not match fd approximation." << std::endl;
- std::cout << "Analytical: " << derivative << std::endl;
- std::cout << "FD : " << fdDerivative << std::endl;
- }
+ static const int embeddedDim = TargetSpace::EmbeddedTangentVector::dimension;
+
+ // A quadrature rule as a set of test points
+ int quadOrder = 3;
+
+ const Dune::QuadratureRule<double, domainDim>& quad
+ = Dune::QuadratureRules<double, domainDim>::rule(f.type(), quadOrder);
+
+ for (size_t pt=0; pt<quad.size(); pt++) {
+
+ const Dune::FieldVector<double,domainDim>& quadPos = quad[pt].position();
+
+ // evaluate actual derivative
+ Dune::FieldMatrix<double, embeddedDim, domainDim> derivative = f.evaluateDerivative(quadPos);
+
+ // evaluate fd approximation of derivative
+ Dune::FieldMatrix<double, embeddedDim, domainDim> fdDerivative = evaluateDerivativeFD(f,quadPos);
+ Dune::FieldMatrix<double, embeddedDim, domainDim> diff = derivative;
+ diff -= fdDerivative;
+
+ if ( diff.infinity_norm() > 100*eps ) {
+ std::cout << className<TargetSpace>() << ": Analytical gradient does not match fd approximation." << std::endl;
+ std::cout << "Analytical: " << derivative << std::endl;
+ std::cout << "FD : " << fdDerivative << std::endl;
}
+
+ }
}
template <int domainDim, class TargetSpace>
void testDerivativeOfValueWRTCoefficients(const LocalGeodesicFEFunction<domainDim,double,typename LagrangeLocalFiniteElementCache<double,double,domainDim,1>::FiniteElementType, TargetSpace>& f)
{
- static const int embeddedDim = TargetSpace::EmbeddedTangentVector::dimension;
-
- // A quadrature rule as a set of test points
- int quadOrder = 3;
-
- const Dune::QuadratureRule<double, domainDim>& quad
- = Dune::QuadratureRules<double, domainDim>::rule(f.type(), quadOrder);
-
- for (size_t pt=0; pt<quad.size(); pt++) {
-
- Dune::FieldVector<double,domainDim> quadPos = quad[pt].position();
-
- // loop over the coefficients
- for (size_t i=0; i<f.size(); i++) {
-
- // evaluate actual derivative
- FieldMatrix<double, embeddedDim, embeddedDim> derivative;
- f.evaluateDerivativeOfValueWRTCoefficient(quadPos, i, derivative);
-
- // evaluate fd approximation of derivative
- FieldMatrix<double, embeddedDim, embeddedDim> fdDerivative;
- f.evaluateFDDerivativeOfValueWRTCoefficient(quadPos, i, fdDerivative);
-
- if ( (derivative - fdDerivative).infinity_norm() > eps ) {
- std::cout << className<TargetSpace>() << ": Analytical derivative of value does not match fd approximation." << std::endl;
- std::cout << "coefficient: " << i << std::endl;
- std::cout << "quad pos: " << quadPos << std::endl;
- std::cout << "gfe: ";
- for (size_t j=0; j<f.size(); j++)
- std::cout << ", " << f.coefficient(j);
- std::cout << std::endl;
- std::cout << "Analytical:\n " << derivative << std::endl;
- std::cout << "FD :\n " << fdDerivative << std::endl;
- assert(false);
- }
-
- }
-
+ static const int embeddedDim = TargetSpace::EmbeddedTangentVector::dimension;
+
+ // A quadrature rule as a set of test points
+ int quadOrder = 3;
+
+ const Dune::QuadratureRule<double, domainDim>& quad
+ = Dune::QuadratureRules<double, domainDim>::rule(f.type(), quadOrder);
+
+ for (size_t pt=0; pt<quad.size(); pt++) {
+
+ Dune::FieldVector<double,domainDim> quadPos = quad[pt].position();
+
+ // loop over the coefficients
+ for (size_t i=0; i<f.size(); i++) {
+
+ // evaluate actual derivative
+ FieldMatrix<double, embeddedDim, embeddedDim> derivative;
+ f.evaluateDerivativeOfValueWRTCoefficient(quadPos, i, derivative);
+
+ // evaluate fd approximation of derivative
+ FieldMatrix<double, embeddedDim, embeddedDim> fdDerivative;
+ f.evaluateFDDerivativeOfValueWRTCoefficient(quadPos, i, fdDerivative);
+
+ if ( (derivative - fdDerivative).infinity_norm() > eps ) {
+ std::cout << className<TargetSpace>() << ": Analytical derivative of value does not match fd approximation." << std::endl;
+ std::cout << "coefficient: " << i << std::endl;
+ std::cout << "quad pos: " << quadPos << std::endl;
+ std::cout << "gfe: ";
+ for (size_t j=0; j<f.size(); j++)
+ std::cout << ", " << f.coefficient(j);
+ std::cout << std::endl;
+ std::cout << "Analytical:\n " << derivative << std::endl;
+ std::cout << "FD :\n " << fdDerivative << std::endl;
+ assert(false);
+ }
+
}
+
+ }
}
template <int domainDim, class TargetSpace>
void testDerivativeOfGradientWRTCoefficients(const LocalGeodesicFEFunction<domainDim,double,typename LagrangeLocalFiniteElementCache<double,double,domainDim,1>::FiniteElementType, TargetSpace>& f)
{
- static const int embeddedDim = TargetSpace::EmbeddedTangentVector::dimension;
-
- // A quadrature rule as a set of test points
- int quadOrder = 3;
-
- const Dune::QuadratureRule<double, domainDim>& quad
- = Dune::QuadratureRules<double, domainDim>::rule(f.type(), quadOrder);
-
- for (size_t pt=0; pt<quad.size(); pt++) {
-
- const Dune::FieldVector<double,domainDim>& quadPos = quad[pt].position();
-
- // loop over the coefficients
- for (size_t i=0; i<f.size(); i++) {
-
- // evaluate actual derivative
- Tensor3<double, embeddedDim, embeddedDim, domainDim> derivative;
- f.evaluateDerivativeOfGradientWRTCoefficient(quadPos, i, derivative);
-
- // evaluate fd approximation of derivative
- Tensor3<double, embeddedDim, embeddedDim, domainDim> fdDerivative;
- f.evaluateFDDerivativeOfGradientWRTCoefficient(quadPos, i, fdDerivative);
-
- if ( (derivative - fdDerivative).infinity_norm() > eps ) {
- std::cout << className<TargetSpace>() << ": Analytical derivative of gradient does not match fd approximation." << std::endl;
- std::cout << "coefficient: " << i << std::endl;
- std::cout << "quad pos: " << quadPos << std::endl;
- std::cout << "gfe: ";
- for (size_t j=0; j<f.size(); j++)
- std::cout << ", " << f.coefficient(j);
- std::cout << std::endl;
- std::cout << "Analytical:\n " << derivative << std::endl;
- std::cout << "FD :\n " << fdDerivative << std::endl;
- assert(false);
- }
-
- }
-
+ static const int embeddedDim = TargetSpace::EmbeddedTangentVector::dimension;
+
+ // A quadrature rule as a set of test points
+ int quadOrder = 3;
+
+ const Dune::QuadratureRule<double, domainDim>& quad
+ = Dune::QuadratureRules<double, domainDim>::rule(f.type(), quadOrder);
+
+ for (size_t pt=0; pt<quad.size(); pt++) {
+
+ const Dune::FieldVector<double,domainDim>& quadPos = quad[pt].position();
+
+ // loop over the coefficients
+ for (size_t i=0; i<f.size(); i++) {
+
+ // evaluate actual derivative
+ Tensor3<double, embeddedDim, embeddedDim, domainDim> derivative;
+ f.evaluateDerivativeOfGradientWRTCoefficient(quadPos, i, derivative);
+
+ // evaluate fd approximation of derivative
+ Tensor3<double, embeddedDim, embeddedDim, domainDim> fdDerivative;
+ f.evaluateFDDerivativeOfGradientWRTCoefficient(quadPos, i, fdDerivative);
+
+ if ( (derivative - fdDerivative).infinity_norm() > eps ) {
+ std::cout << className<TargetSpace>() << ": Analytical derivative of gradient does not match fd approximation." << std::endl;
+ std::cout << "coefficient: " << i << std::endl;
+ std::cout << "quad pos: " << quadPos << std::endl;
+ std::cout << "gfe: ";
+ for (size_t j=0; j<f.size(); j++)
+ std::cout << ", " << f.coefficient(j);
+ std::cout << std::endl;
+ std::cout << "Analytical:\n " << derivative << std::endl;
+ std::cout << "FD :\n " << fdDerivative << std::endl;
+ assert(false);
+ }
+
}
+
+ }
}
template <class TargetSpace, int domainDim>
void test(const GeometryType& element)
{
- std::cout << " --- Testing " << className<TargetSpace>() << ", domain dimension: " << element.dim() << " ---" << std::endl;
-
- std::vector<TargetSpace> testPoints;
- ValueFactory<TargetSpace>::get(testPoints);
-
- int nTestPoints = testPoints.size();
- size_t nVertices = Dune::ReferenceElements<double,domainDim>::general(element).size(domainDim);
-
- // Set up elements of the target space
- std::vector<TargetSpace> corners(nVertices);
-
- MultiIndex index(nVertices, nTestPoints);
- int numIndices = index.cycle();
-
- for (int i=0; i<numIndices; i++, ++index) {
-
- for (size_t j=0; j<nVertices; j++)
- corners[j] = testPoints[index[j]];
-
- if (diameter(corners) > 0.5*M_PI)
- continue;
-
- // Make local gfe function to be tested
- LagrangeLocalFiniteElementCache<double,double,domainDim,1> feCache;
- typedef typename LagrangeLocalFiniteElementCache<double,double,domainDim,1>::FiniteElementType LocalFiniteElement;
-
- LocalGeodesicFEFunction<domainDim,double,LocalFiniteElement,TargetSpace> f(feCache.get(element),corners);
-
- //testPermutationInvariance(corners);
- testDerivative<domainDim>(f);
- testDerivativeOfValueWRTCoefficients<domainDim>(f);
- testDerivativeOfGradientWRTCoefficients<domainDim>(f);
-
- }
+ std::cout << " --- Testing " << className<TargetSpace>() << ", domain dimension: " << element.dim() << " ---" << std::endl;
+
+ std::vector<TargetSpace> testPoints;
+ ValueFactory<TargetSpace>::get(testPoints);
+
+ int nTestPoints = testPoints.size();
+ size_t nVertices = Dune::ReferenceElements<double,domainDim>::general(element).size(domainDim);
+
+ // Set up elements of the target space
+ std::vector<TargetSpace> corners(nVertices);
+
+ MultiIndex index(nVertices, nTestPoints);
+ int numIndices = index.cycle();
+
+ for (int i=0; i<numIndices; i++, ++index) {
+
+ for (size_t j=0; j<nVertices; j++)
+ corners[j] = testPoints[index[j]];
+
+ if (diameter(corners) > 0.5*M_PI)
+ continue;
+
+ // Make local gfe function to be tested
+ LagrangeLocalFiniteElementCache<double,double,domainDim,1> feCache;
+ typedef typename LagrangeLocalFiniteElementCache<double,double,domainDim,1>::FiniteElementType LocalFiniteElement;
+
+ LocalGeodesicFEFunction<domainDim,double,LocalFiniteElement,TargetSpace> f(feCache.get(element),corners);
+
+ //testPermutationInvariance(corners);
+ testDerivative<domainDim>(f);
+ testDerivativeOfValueWRTCoefficients<domainDim>(f);
+ testDerivativeOfGradientWRTCoefficients<domainDim>(f);
+
+ }
}
int main()
{
- // choke on NaN -- don't enable this by default, as there are
- // a few harmless NaN in the loopsolver
- //feenableexcept(FE_INVALID);
-
- std::cout << std::setw(15) << std::setprecision(12);
-
- ////////////////////////////////////////////////////////////////
- // Test functions on 1d elements
- ////////////////////////////////////////////////////////////////
-
- test<RealTuple<double,1>,1>(GeometryTypes::simplex(1));
- test<UnitVector<double,2>,1>(GeometryTypes::simplex(1));
- test<UnitVector<double,3>,1>(GeometryTypes::simplex(1));
- test<Rotation<double,3>,1>(GeometryTypes::simplex(1));
- test<RigidBodyMotion<double,3>,1>(GeometryTypes::simplex(1));
- typedef Dune::GFE::ProductManifold<RealTuple<double,1>,Rotation<double,3>,UnitVector<double,2>> CrazyManifold;
- test<CrazyManifold,1>(GeometryTypes::simplex(1));
-
- ////////////////////////////////////////////////////////////////
- // Test functions on 2d simplex elements
- ////////////////////////////////////////////////////////////////
-
- test<RealTuple<double,1>,2>(GeometryTypes::simplex(2));
- test<UnitVector<double,2>,2>(GeometryTypes::simplex(2));
- test<UnitVector<double,3>,2>(GeometryTypes::simplex(2));
- test<Rotation<double,3>,2>(GeometryTypes::simplex(2));
- test<RigidBodyMotion<double,3>,2>(GeometryTypes::simplex(2));
- typedef Dune::GFE::ProductManifold<RealTuple<double,1>,Rotation<double,3>,UnitVector<double,2>> CrazyManifold;
- test<CrazyManifold,2>(GeometryTypes::simplex(2));
-
- ////////////////////////////////////////////////////////////////
- // Test functions on 2d quadrilateral elements
- ////////////////////////////////////////////////////////////////
-
- test<RealTuple<double,1>,2>(GeometryTypes::cube(2));
- test<UnitVector<double,2>,2>(GeometryTypes::cube(2));
- test<UnitVector<double,3>,2>(GeometryTypes::cube(2));
- test<Rotation<double,3>,2>(GeometryTypes::cube(2));
- test<RigidBodyMotion<double,3>,2>(GeometryTypes::cube(2));
- typedef Dune::GFE::ProductManifold<RealTuple<double,1>,Rotation<double,3>,UnitVector<double,2>> CrazyManifold;
- test<CrazyManifold,2>(GeometryTypes::cube(2));
+ // choke on NaN -- don't enable this by default, as there are
+ // a few harmless NaN in the loopsolver
+ //feenableexcept(FE_INVALID);
+
+ std::cout << std::setw(15) << std::setprecision(12);
+
+ ////////////////////////////////////////////////////////////////
+ // Test functions on 1d elements
+ ////////////////////////////////////////////////////////////////
+
+ test<RealTuple<double,1>,1>(GeometryTypes::simplex(1));
+ test<UnitVector<double,2>,1>(GeometryTypes::simplex(1));
+ test<UnitVector<double,3>,1>(GeometryTypes::simplex(1));
+ test<Rotation<double,3>,1>(GeometryTypes::simplex(1));
+ test<RigidBodyMotion<double,3>,1>(GeometryTypes::simplex(1));
+ typedef Dune::GFE::ProductManifold<RealTuple<double,1>,Rotation<double,3>,UnitVector<double,2> > CrazyManifold;
+ test<CrazyManifold,1>(GeometryTypes::simplex(1));
+
+ ////////////////////////////////////////////////////////////////
+ // Test functions on 2d simplex elements
+ ////////////////////////////////////////////////////////////////
+
+ test<RealTuple<double,1>,2>(GeometryTypes::simplex(2));
+ test<UnitVector<double,2>,2>(GeometryTypes::simplex(2));
+ test<UnitVector<double,3>,2>(GeometryTypes::simplex(2));
+ test<Rotation<double,3>,2>(GeometryTypes::simplex(2));
+ test<RigidBodyMotion<double,3>,2>(GeometryTypes::simplex(2));
+ typedef Dune::GFE::ProductManifold<RealTuple<double,1>,Rotation<double,3>,UnitVector<double,2> > CrazyManifold;
+ test<CrazyManifold,2>(GeometryTypes::simplex(2));
+
+ ////////////////////////////////////////////////////////////////
+ // Test functions on 2d quadrilateral elements
+ ////////////////////////////////////////////////////////////////
+
+ test<RealTuple<double,1>,2>(GeometryTypes::cube(2));
+ test<UnitVector<double,2>,2>(GeometryTypes::cube(2));
+ test<UnitVector<double,3>,2>(GeometryTypes::cube(2));
+ test<Rotation<double,3>,2>(GeometryTypes::cube(2));
+ test<RigidBodyMotion<double,3>,2>(GeometryTypes::cube(2));
+ typedef Dune::GFE::ProductManifold<RealTuple<double,1>,Rotation<double,3>,UnitVector<double,2> > CrazyManifold;
+ test<CrazyManifold,2>(GeometryTypes::cube(2));
}
diff --git a/test/localgfetestfunctiontest.cc b/test/localgfetestfunctiontest.cc
index 47ba3738..55a92f96 100644
--- a/test/localgfetestfunctiontest.cc
+++ b/test/localgfetestfunctiontest.cc
@@ -25,65 +25,65 @@ using namespace Dune;
template <class TargetSpace, int domainDim>
void test()
{
- std::cout << " --- Testing " << className<TargetSpace>() << ", domain dimension: " << domainDim << " ---" << std::endl;
-
- std::vector<TargetSpace> testPoints;
- ValueFactory<TargetSpace>::get(testPoints);
-
- int nTestPoints = testPoints.size();
-
- // Set up elements of SO(3)
- std::vector<TargetSpace> coefficients(domainDim+1);
-
- MultiIndex index(domainDim+1, nTestPoints);
- int numIndices = index.cycle();
-
- LagrangeLocalFiniteElementCache<double,double,domainDim,1> feCache;
- typedef typename LagrangeLocalFiniteElementCache<double,double,domainDim,1>::FiniteElementType LocalFiniteElement;
-
- for (int i=0; i<numIndices; i++, ++index) {
-
- for (int j=0; j<domainDim+1; j++)
- coefficients[j] = testPoints[index[j]];
-
- LocalGfeTestFunctionFiniteElement<LocalFiniteElement,TargetSpace> testFunctionSet(feCache.get(GeometryTypes::simplex(domainDim)),coefficients);
-
- FieldVector<double,domainDim> stupidTestPoint(0);
-
- // test whether evaluation of the shape functions works
- std::vector<std::array<typename TargetSpace::EmbeddedTangentVector, TargetSpace::TangentVector::dimension> > values;
- testFunctionSet.localBasis().evaluateFunction(stupidTestPoint, values);
-
- // test whether evaluation of the shape function derivatives works
- std::vector<std::array<FieldMatrix<double, TargetSpace::EmbeddedTangentVector::dimension, domainDim>, TargetSpace::TangentVector::dimension> > derivatives;
- testFunctionSet.localBasis().evaluateJacobian(stupidTestPoint, derivatives);
-
- }
+ std::cout << " --- Testing " << className<TargetSpace>() << ", domain dimension: " << domainDim << " ---" << std::endl;
+
+ std::vector<TargetSpace> testPoints;
+ ValueFactory<TargetSpace>::get(testPoints);
+
+ int nTestPoints = testPoints.size();
+
+ // Set up elements of SO(3)
+ std::vector<TargetSpace> coefficients(domainDim+1);
+
+ MultiIndex index(domainDim+1, nTestPoints);
+ int numIndices = index.cycle();
+
+ LagrangeLocalFiniteElementCache<double,double,domainDim,1> feCache;
+ typedef typename LagrangeLocalFiniteElementCache<double,double,domainDim,1>::FiniteElementType LocalFiniteElement;
+
+ for (int i=0; i<numIndices; i++, ++index) {
+
+ for (int j=0; j<domainDim+1; j++)
+ coefficients[j] = testPoints[index[j]];
+
+ LocalGfeTestFunctionFiniteElement<LocalFiniteElement,TargetSpace> testFunctionSet(feCache.get(GeometryTypes::simplex(domainDim)),coefficients);
+
+ FieldVector<double,domainDim> stupidTestPoint(0);
+
+ // test whether evaluation of the shape functions works
+ std::vector<std::array<typename TargetSpace::EmbeddedTangentVector, TargetSpace::TangentVector::dimension> > values;
+ testFunctionSet.localBasis().evaluateFunction(stupidTestPoint, values);
+
+ // test whether evaluation of the shape function derivatives works
+ std::vector<std::array<FieldMatrix<double, TargetSpace::EmbeddedTangentVector::dimension, domainDim>, TargetSpace::TangentVector::dimension> > derivatives;
+ testFunctionSet.localBasis().evaluateJacobian(stupidTestPoint, derivatives);
+
+ }
}
int main() try
{
- // choke on NaN -- don't enable this by default, as there are
- // a few harmless NaN in the loopsolver
- //feenableexcept(FE_INVALID);
-
- std::cout << std::setw(15) << std::setprecision(12);
-
- test<RealTuple<double,1>, 1>();
-
- test<UnitVector<double,2>, 1>();
- test<UnitVector<double,3>, 1>();
- test<UnitVector<double,2>, 2>();
- test<UnitVector<double,3>, 2>();
-
- test<Rotation<double,3>, 1>();
- test<Rotation<double,3>, 2>();
- typedef Dune::GFE::ProductManifold<RealTuple<double,1>,Rotation<double,3>,UnitVector<double,2>> CrazyManifold;
- test<CrazyManifold, 2>();
-
-} catch (Exception& e) {
- std::cout << e.what() << std::endl;
-}
+ // choke on NaN -- don't enable this by default, as there are
+ // a few harmless NaN in the loopsolver
+ //feenableexcept(FE_INVALID);
+
+ std::cout << std::setw(15) << std::setprecision(12);
+
+ test<RealTuple<double,1>, 1>();
+ test<UnitVector<double,2>, 1>();
+ test<UnitVector<double,3>, 1>();
+ test<UnitVector<double,2>, 2>();
+ test<UnitVector<double,3>, 2>();
+
+ test<Rotation<double,3>, 1>();
+ test<Rotation<double,3>, 2>();
+ typedef Dune::GFE::ProductManifold<RealTuple<double,1>,Rotation<double,3>,UnitVector<double,2> > CrazyManifold;
+ test<CrazyManifold, 2>();
+
+}
+catch (Exception& e) {
+ std::cout << e.what() << std::endl;
+}
diff --git a/test/localprojectedfefunctiontest.cc b/test/localprojectedfefunctiontest.cc
index 142b62ef..58373aba 100644
--- a/test/localprojectedfefunctiontest.cc
+++ b/test/localprojectedfefunctiontest.cc
@@ -29,11 +29,11 @@ using namespace Dune;
template <class TargetSpace>
double diameter(const std::vector<TargetSpace>& v)
{
- double d = 0;
- for (size_t i=0; i<v.size(); i++)
- for (size_t j=0; j<v.size(); j++)
- d = std::max(d, TargetSpace::distance(v[i],v[j]));
- return d;
+ double d = 0;
+ for (size_t i=0; i<v.size(); i++)
+ for (size_t j=0; j<v.size(); j++)
+ d = std::max(d, TargetSpace::distance(v[i],v[j]));
+ return d;
}
template <int dim, class ctype, class LocalFunction>
@@ -41,27 +41,27 @@ auto
evaluateDerivativeFD(const LocalFunction& f, const Dune::FieldVector<ctype, dim>& local)
-> decltype(f.evaluateDerivative(local))
{
- double eps = 1e-8;
- static const int embeddedDim = LocalFunction::TargetSpace::embeddedDim;
- Dune::FieldMatrix<ctype, embeddedDim, dim> result;
+ double eps = 1e-8;
+ static const int embeddedDim = LocalFunction::TargetSpace::embeddedDim;
+ Dune::FieldMatrix<ctype, embeddedDim, dim> result;
- for (int i=0; i<dim; i++) {
+ for (int i=0; i<dim; i++) {
- Dune::FieldVector<ctype, dim> forward = local;
- Dune::FieldVector<ctype, dim> backward = local;
+ Dune::FieldVector<ctype, dim> forward = local;
+ Dune::FieldVector<ctype, dim> backward = local;
- forward[i] += eps;
- backward[i] -= eps;
+ forward[i] += eps;
+ backward[i] -= eps;
- auto fdDer = f.evaluate(forward).globalCoordinates() - f.evaluate(backward).globalCoordinates();
- fdDer /= 2*eps;
+ auto fdDer = f.evaluate(forward).globalCoordinates() - f.evaluate(backward).globalCoordinates();
+ fdDer /= 2*eps;
- for (int j=0; j<embeddedDim; j++)
- result[j][i] = fdDer[j];
+ for (int j=0; j<embeddedDim; j++)
+ result[j][i] = fdDer[j];
- }
+ }
- return result;
+ return result;
}
@@ -69,7 +69,7 @@ template <int domainDim, int dim>
void testDerivativeTangentiality(const RealTuple<double,dim>& x,
const FieldMatrix<double,dim,domainDim>& derivative)
{
- // By construction, derivatives of RealTuples are always tangent
+ // By construction, derivatives of RealTuples are always tangent
}
// the columns of the derivative must be tangential to the manifold
@@ -77,18 +77,18 @@ template <int domainDim, int vectorDim>
void testDerivativeTangentiality(const UnitVector<double,vectorDim>& x,
const FieldMatrix<double,vectorDim,domainDim>& derivative)
{
- for (int i=0; i<domainDim; i++) {
+ for (int i=0; i<domainDim; i++) {
- // The i-th column is a tangent vector if its scalar product with the global coordinates
- // of x vanishes.
- double sp = 0;
- for (int j=0; j<vectorDim; j++)
- sp += x.globalCoordinates()[j] * derivative[j][i];
+ // The i-th column is a tangent vector if its scalar product with the global coordinates
+ // of x vanishes.
+ double sp = 0;
+ for (int j=0; j<vectorDim; j++)
+ sp += x.globalCoordinates()[j] * derivative[j][i];
- if (std::fabs(sp) > 1e-8)
- DUNE_THROW(Dune::Exception, "Derivative is not tangential: Column: " << i << ", product: " << sp);
+ if (std::fabs(sp) > 1e-8)
+ DUNE_THROW(Dune::Exception, "Derivative is not tangential: Column: " << i << ", product: " << sp);
- }
+ }
}
@@ -96,28 +96,26 @@ void testDerivativeTangentiality(const UnitVector<double,vectorDim>& x,
template <int domainDim, int vectorDim>
void testDerivativeTangentiality(const Rotation<double,vectorDim-1>& x,
const FieldMatrix<double,vectorDim,domainDim>& derivative)
-{
-}
+{}
// the columns of the derivative must be tangential to the manifold
template <int domainDim, int vectorDim>
void testDerivativeTangentiality(const RigidBodyMotion<double,3>& x,
const FieldMatrix<double,vectorDim,domainDim>& derivative)
-{
-}
+{}
// the columns of the derivative must be tangential to the manifold
-template <int domainDim, int vectorDim,typename ...TargetSpaces>
+template <int domainDim, int vectorDim,typename ... TargetSpaces>
void testDerivativeTangentiality(const Dune::GFE::ProductManifold<TargetSpaces...>& x,
const FieldMatrix<double,vectorDim,domainDim>& derivative)
{
- size_t posHelper=0;
- using namespace Dune::Hybrid;
- forEach(integralRange(Dune::Hybrid::size(x)), [&](auto&& i) {
- using Manifold = std::remove_reference_t<decltype(x[i])>;
- testDerivativeTangentiality(x[i],Dune::GFE::blockAt<Manifold::embeddedDim,domainDim>( derivative,posHelper,0));
- posHelper +=Manifold::embeddedDim;
- });
+ size_t posHelper=0;
+ using namespace Dune::Hybrid;
+ forEach(integralRange(Dune::Hybrid::size(x)), [&](auto&& i) {
+ using Manifold = std::remove_reference_t<decltype(x[i])>;
+ testDerivativeTangentiality(x[i],Dune::GFE::blockAt<Manifold::embeddedDim,domainDim>( derivative,posHelper,0));
+ posHelper +=Manifold::embeddedDim;
+ });
}
/** \brief Test whether interpolation is invariant under permutation of the simplex vertices
@@ -126,179 +124,179 @@ void testDerivativeTangentiality(const Dune::GFE::ProductManifold<TargetSpaces..
template <int domainDim, class TargetSpace>
void testPermutationInvariance(const std::vector<TargetSpace>& corners)
{
- // works only for 2d domains
- if (domainDim!=2)
- return;
+ // works only for 2d domains
+ if (domainDim!=2)
+ return;
- LagrangeLocalFiniteElementCache<double,double,domainDim,1> feCache;
- typedef typename LagrangeLocalFiniteElementCache<double,double,domainDim,1>::FiniteElementType LocalFiniteElement;
+ LagrangeLocalFiniteElementCache<double,double,domainDim,1> feCache;
+ typedef typename LagrangeLocalFiniteElementCache<double,double,domainDim,1>::FiniteElementType LocalFiniteElement;
- GeometryType simplex = GeometryTypes::simplex(domainDim);
+ GeometryType simplex = GeometryTypes::simplex(domainDim);
- //
- std::vector<TargetSpace> cornersRotated1(domainDim+1);
- std::vector<TargetSpace> cornersRotated2(domainDim+1);
+ //
+ std::vector<TargetSpace> cornersRotated1(domainDim+1);
+ std::vector<TargetSpace> cornersRotated2(domainDim+1);
- cornersRotated1[0] = cornersRotated2[2] = corners[1];
- cornersRotated1[1] = cornersRotated2[0] = corners[2];
- cornersRotated1[2] = cornersRotated2[1] = corners[0];
+ cornersRotated1[0] = cornersRotated2[2] = corners[1];
+ cornersRotated1[1] = cornersRotated2[0] = corners[2];
+ cornersRotated1[2] = cornersRotated2[1] = corners[0];
- GFE::LocalProjectedFEFunction<2,double,LocalFiniteElement,TargetSpace> f0(feCache.get(simplex), corners);
- GFE::LocalProjectedFEFunction<2,double,LocalFiniteElement,TargetSpace> f1(feCache.get(simplex), cornersRotated1);
- GFE::LocalProjectedFEFunction<2,double,LocalFiniteElement,TargetSpace> f2(feCache.get(simplex), cornersRotated2);
+ GFE::LocalProjectedFEFunction<2,double,LocalFiniteElement,TargetSpace> f0(feCache.get(simplex), corners);
+ GFE::LocalProjectedFEFunction<2,double,LocalFiniteElement,TargetSpace> f1(feCache.get(simplex), cornersRotated1);
+ GFE::LocalProjectedFEFunction<2,double,LocalFiniteElement,TargetSpace> f2(feCache.get(simplex), cornersRotated2);
- // A quadrature rule as a set of test points
- int quadOrder = 3;
+ // A quadrature rule as a set of test points
+ int quadOrder = 3;
- const Dune::QuadratureRule<double, domainDim>& quad
- = Dune::QuadratureRules<double, domainDim>::rule(simplex, quadOrder);
+ const Dune::QuadratureRule<double, domainDim>& quad
+ = Dune::QuadratureRules<double, domainDim>::rule(simplex, quadOrder);
- for (size_t pt=0; pt<quad.size(); pt++) {
+ for (size_t pt=0; pt<quad.size(); pt++) {
- const Dune::FieldVector<double,domainDim>& quadPos = quad[pt].position();
+ const Dune::FieldVector<double,domainDim>& quadPos = quad[pt].position();
- Dune::FieldVector<double,domainDim> l0 = quadPos;
- Dune::FieldVector<double,domainDim> l1, l2;
+ Dune::FieldVector<double,domainDim> l0 = quadPos;
+ Dune::FieldVector<double,domainDim> l1, l2;
- l1[0] = quadPos[1];
- l1[1] = 1-quadPos[0]-quadPos[1];
+ l1[0] = quadPos[1];
+ l1[1] = 1-quadPos[0]-quadPos[1];
- l2[0] = 1-quadPos[0]-quadPos[1];
- l2[1] = quadPos[0];
+ l2[0] = 1-quadPos[0]-quadPos[1];
+ l2[1] = quadPos[0];
- // evaluate the three functions
- TargetSpace v0 = f0.evaluate(l0);
- TargetSpace v1 = f1.evaluate(l1);
- TargetSpace v2 = f2.evaluate(l2);
+ // evaluate the three functions
+ TargetSpace v0 = f0.evaluate(l0);
+ TargetSpace v1 = f1.evaluate(l1);
+ TargetSpace v2 = f2.evaluate(l2);
- // Check that they are all equal
- assert(TargetSpace::distance(v0,v1) < eps);
- assert(TargetSpace::distance(v0,v2) < eps);
+ // Check that they are all equal
+ assert(TargetSpace::distance(v0,v1) < eps);
+ assert(TargetSpace::distance(v0,v2) < eps);
- }
+ }
}
template <int domainDim, class TargetSpace, bool conforming=true>
void testDerivative(const GFE::LocalProjectedFEFunction<domainDim,double,typename LagrangeLocalFiniteElementCache<double,double,domainDim,1>::FiniteElementType, TargetSpace, conforming>& f)
{
- static const int embeddedDim = TargetSpace::EmbeddedTangentVector::dimension;
+ static const int embeddedDim = TargetSpace::EmbeddedTangentVector::dimension;
- // A quadrature rule as a set of test points
- int quadOrder = 3;
+ // A quadrature rule as a set of test points
+ int quadOrder = 3;
- const auto& quad = Dune::QuadratureRules<double, domainDim>::rule(f.type(), quadOrder);
+ const auto& quad = Dune::QuadratureRules<double, domainDim>::rule(f.type(), quadOrder);
- for (size_t pt=0; pt<quad.size(); pt++) {
+ for (size_t pt=0; pt<quad.size(); pt++) {
- const Dune::FieldVector<double,domainDim>& quadPos = quad[pt].position();
+ const Dune::FieldVector<double,domainDim>& quadPos = quad[pt].position();
- // evaluate actual derivative
- Dune::FieldMatrix<double, embeddedDim, domainDim> derivative = f.evaluateDerivative(quadPos);
+ // evaluate actual derivative
+ Dune::FieldMatrix<double, embeddedDim, domainDim> derivative = f.evaluateDerivative(quadPos);
- // evaluate fd approximation of derivative
- Dune::FieldMatrix<double, embeddedDim, domainDim> fdDerivative = evaluateDerivativeFD(f,quadPos);
+ // evaluate fd approximation of derivative
+ Dune::FieldMatrix<double, embeddedDim, domainDim> fdDerivative = evaluateDerivativeFD(f,quadPos);
- Dune::FieldMatrix<double, embeddedDim, domainDim> diff = derivative;
- diff -= fdDerivative;
+ Dune::FieldMatrix<double, embeddedDim, domainDim> diff = derivative;
+ diff -= fdDerivative;
- if ( diff.infinity_norm() > 100*eps ) {
- std::cout << className<TargetSpace>() << ": Analytical gradient does not match fd approximation." << std::endl;
- std::cout << "Analytical: " << derivative << std::endl;
- std::cout << "FD : " << fdDerivative << std::endl;
- assert(false);
- }
+ if ( diff.infinity_norm() > 100*eps ) {
+ std::cout << className<TargetSpace>() << ": Analytical gradient does not match fd approximation." << std::endl;
+ std::cout << "Analytical: " << derivative << std::endl;
+ std::cout << "FD : " << fdDerivative << std::endl;
+ assert(false);
+ }
- if(conforming)
- testDerivativeTangentiality(f.evaluate(quadPos), derivative);
+ if(conforming)
+ testDerivativeTangentiality(f.evaluate(quadPos), derivative);
- }
+ }
}
template <class TargetSpace, int domainDim>
void test(const GeometryType& element)
{
- std::cout << " --- Testing " << className<TargetSpace>() << ", domain dimension: " << element.dim() << " ---" << std::endl;
+ std::cout << " --- Testing " << className<TargetSpace>() << ", domain dimension: " << element.dim() << " ---" << std::endl;
- std::vector<TargetSpace> testPoints;
- ValueFactory<TargetSpace>::get(testPoints);
+ std::vector<TargetSpace> testPoints;
+ ValueFactory<TargetSpace>::get(testPoints);
- int nTestPoints = testPoints.size();
- size_t nVertices = Dune::ReferenceElements<double,domainDim>::general(element).size(domainDim);
+ int nTestPoints = testPoints.size();
+ size_t nVertices = Dune::ReferenceElements<double,domainDim>::general(element).size(domainDim);
- // Set up elements of the target space
- std::vector<TargetSpace> corners(nVertices);
+ // Set up elements of the target space
+ std::vector<TargetSpace> corners(nVertices);
- MultiIndex index(nVertices, nTestPoints);
- int numIndices = index.cycle();
+ MultiIndex index(nVertices, nTestPoints);
+ int numIndices = index.cycle();
- for (int i=0; i<numIndices; i++, ++index) {
+ for (int i=0; i<numIndices; i++, ++index) {
- for (size_t j=0; j<nVertices; j++)
- corners[j] = testPoints[index[j]];
+ for (size_t j=0; j<nVertices; j++)
+ corners[j] = testPoints[index[j]];
- if (diameter(corners) > 0.5*M_PI)
- continue;
+ if (diameter(corners) > 0.5*M_PI)
+ continue;
- // Make local gfe function to be tested
- LagrangeLocalFiniteElementCache<double,double,domainDim,1> feCache;
- typedef typename LagrangeLocalFiniteElementCache<double,double,domainDim,1>::FiniteElementType LocalFiniteElement;
+ // Make local gfe function to be tested
+ LagrangeLocalFiniteElementCache<double,double,domainDim,1> feCache;
+ typedef typename LagrangeLocalFiniteElementCache<double,double,domainDim,1>::FiniteElementType LocalFiniteElement;
- GFE::LocalProjectedFEFunction<domainDim,double,LocalFiniteElement,TargetSpace> f(feCache.get(element),corners);
- GFE::LocalProjectedFEFunction<domainDim, double, LocalFiniteElement, TargetSpace,false> f_nonconforming(feCache.get(element), corners);
+ GFE::LocalProjectedFEFunction<domainDim,double,LocalFiniteElement,TargetSpace> f(feCache.get(element),corners);
+ GFE::LocalProjectedFEFunction<domainDim, double, LocalFiniteElement, TargetSpace,false> f_nonconforming(feCache.get(element), corners);
- //testPermutationInvariance(corners);
- testDerivative<domainDim>(f);
- testDerivative<domainDim>(f_nonconforming);
- }
+ //testPermutationInvariance(corners);
+ testDerivative<domainDim>(f);
+ testDerivative<domainDim>(f_nonconforming);
+ }
}
int main()
{
- // choke on NaN -- don't enable this by default, as there are
- // a few harmless NaN in the loopsolver
- //feenableexcept(FE_INVALID);
-
- std::cout << std::setw(15) << std::setprecision(12);
-
- ////////////////////////////////////////////////////////////////
- // Test functions on 1d elements
- ////////////////////////////////////////////////////////////////
-
- test<RealTuple<double,1>,1>(GeometryTypes::line);
- test<UnitVector<double,2>,1>(GeometryTypes::line);
- test<UnitVector<double,3>,1>(GeometryTypes::line);
- test<Rotation<double,3>,1>(GeometryTypes::line);
- test<RigidBodyMotion<double,3>,1>(GeometryTypes::line);
- typedef Dune::GFE::ProductManifold<RealTuple<double,1>,Rotation<double,3>,UnitVector<double,2>> CrazyManifold;
- test<CrazyManifold, 1>(GeometryTypes::line);
-
- ////////////////////////////////////////////////////////////////
- // Test functions on 2d simplex elements
- ////////////////////////////////////////////////////////////////
-
- test<RealTuple<double,1>,2>(GeometryTypes::triangle);
- test<UnitVector<double,2>,2>(GeometryTypes::triangle);
- test<RealTuple<double,3>,2>(GeometryTypes::triangle);
- test<UnitVector<double,3>,2>(GeometryTypes::triangle);
- test<Rotation<double,3>,2>(GeometryTypes::triangle);
- test<RigidBodyMotion<double,3>,2>(GeometryTypes::triangle);
- typedef Dune::GFE::ProductManifold<RealTuple<double,1>,Rotation<double,3>,UnitVector<double,2>> CrazyManifold;
- test<CrazyManifold, 2>(GeometryTypes::triangle);
-
- ////////////////////////////////////////////////////////////////
- // Test functions on 2d quadrilateral elements
- ////////////////////////////////////////////////////////////////
-
- test<RealTuple<double,1>,2>(GeometryTypes::quadrilateral);
- test<UnitVector<double,2>,2>(GeometryTypes::quadrilateral);
- test<UnitVector<double,3>,2>(GeometryTypes::quadrilateral);
- test<Rotation<double,3>,2>(GeometryTypes::quadrilateral);
- test<RigidBodyMotion<double,3>,2>(GeometryTypes::quadrilateral);
- typedef Dune::GFE::ProductManifold<RealTuple<double,1>,Rotation<double,3>,UnitVector<double,2>> CrazyManifold;
- test<CrazyManifold, 2>(GeometryTypes::quadrilateral);
+ // choke on NaN -- don't enable this by default, as there are
+ // a few harmless NaN in the loopsolver
+ //feenableexcept(FE_INVALID);
+
+ std::cout << std::setw(15) << std::setprecision(12);
+
+ ////////////////////////////////////////////////////////////////
+ // Test functions on 1d elements
+ ////////////////////////////////////////////////////////////////
+
+ test<RealTuple<double,1>,1>(GeometryTypes::line);
+ test<UnitVector<double,2>,1>(GeometryTypes::line);
+ test<UnitVector<double,3>,1>(GeometryTypes::line);
+ test<Rotation<double,3>,1>(GeometryTypes::line);
+ test<RigidBodyMotion<double,3>,1>(GeometryTypes::line);
+ typedef Dune::GFE::ProductManifold<RealTuple<double,1>,Rotation<double,3>,UnitVector<double,2> > CrazyManifold;
+ test<CrazyManifold, 1>(GeometryTypes::line);
+
+ ////////////////////////////////////////////////////////////////
+ // Test functions on 2d simplex elements
+ ////////////////////////////////////////////////////////////////
+
+ test<RealTuple<double,1>,2>(GeometryTypes::triangle);
+ test<UnitVector<double,2>,2>(GeometryTypes::triangle);
+ test<RealTuple<double,3>,2>(GeometryTypes::triangle);
+ test<UnitVector<double,3>,2>(GeometryTypes::triangle);
+ test<Rotation<double,3>,2>(GeometryTypes::triangle);
+ test<RigidBodyMotion<double,3>,2>(GeometryTypes::triangle);
+ typedef Dune::GFE::ProductManifold<RealTuple<double,1>,Rotation<double,3>,UnitVector<double,2> > CrazyManifold;
+ test<CrazyManifold, 2>(GeometryTypes::triangle);
+
+ ////////////////////////////////////////////////////////////////
+ // Test functions on 2d quadrilateral elements
+ ////////////////////////////////////////////////////////////////
+
+ test<RealTuple<double,1>,2>(GeometryTypes::quadrilateral);
+ test<UnitVector<double,2>,2>(GeometryTypes::quadrilateral);
+ test<UnitVector<double,3>,2>(GeometryTypes::quadrilateral);
+ test<Rotation<double,3>,2>(GeometryTypes::quadrilateral);
+ test<RigidBodyMotion<double,3>,2>(GeometryTypes::quadrilateral);
+ typedef Dune::GFE::ProductManifold<RealTuple<double,1>,Rotation<double,3>,UnitVector<double,2> > CrazyManifold;
+ test<CrazyManifold, 2>(GeometryTypes::quadrilateral);
}
diff --git a/test/multiindex.hh b/test/multiindex.hh
index f9b9fad3..51b80d4e 100644
--- a/test/multiindex.hh
+++ b/test/multiindex.hh
@@ -4,51 +4,51 @@
#include <vector>
/** \brief A multi-index
-*/
+ */
class MultiIndex
- : public std::vector<unsigned int>
+ : public std::vector<unsigned int>
{
- // The range of each component
- unsigned int limit_;
+ // The range of each component
+ unsigned int limit_;
public:
- /** \brief Constructor with a given range for each digit
- * \param n Number of digits
- */
- MultiIndex(unsigned int n, unsigned int limit)
- : std::vector<unsigned int>(n),
- limit_(limit)
- {
- std::fill(this->begin(), this->end(), 0);
- }
+ /** \brief Constructor with a given range for each digit
+ * \param n Number of digits
+ */
+ MultiIndex(unsigned int n, unsigned int limit)
+ : std::vector<unsigned int>(n),
+ limit_(limit)
+ {
+ std::fill(this->begin(), this->end(), 0);
+ }
- /** \brief Increment the MultiIndex */
- MultiIndex& operator++() {
+ /** \brief Increment the MultiIndex */
+ MultiIndex& operator++() {
- for (size_t i=0; i<size(); i++) {
+ for (size_t i=0; i<size(); i++) {
- // Augment digit
- (*this)[i]++;
+ // Augment digit
+ (*this)[i]++;
- // If there is no carry-over we can stop here
- if ((*this)[i]<limit_)
- break;
+ // If there is no carry-over we can stop here
+ if ((*this)[i]<limit_)
+ break;
- (*this)[i] = 0;
-
- }
- return *this;
- }
+ (*this)[i] = 0;
- /** \brief Compute how many times you can call operator++ before getting to (0,...,0) again */
- size_t cycle() const {
- size_t result = 1;
- for (size_t i=0; i<size(); i++)
- result *= limit_;
- return result;
}
+ return *this;
+ }
+
+ /** \brief Compute how many times you can call operator++ before getting to (0,...,0) again */
+ size_t cycle() const {
+ size_t result = 1;
+ for (size_t i=0; i<size(); i++)
+ result *= limit_;
+ return result;
+ }
};
-#endif
\ No newline at end of file
+#endif
diff --git a/test/nonplanarcosseratenergytest.cc b/test/nonplanarcosseratenergytest.cc
index 17c3c3f9..ddb2ee83 100644
--- a/test/nonplanarcosseratenergytest.cc
+++ b/test/nonplanarcosseratenergytest.cc
@@ -33,20 +33,20 @@ using TargetSpace = RigidBodyMotion<double,dimworld>;
template <class GridType>
std::unique_ptr<GridType> makeSingleElementGrid()
{
- constexpr auto triangle = Dune::GeometryTypes::triangle;
- GridFactory<GridType> factory;
+ constexpr auto triangle = Dune::GeometryTypes::triangle;
+ GridFactory<GridType> factory;
- //Create a triangle that is not parallel to the planes formed by the coordinate axes
- FieldVector<double,dimworld> vertex0{0,0,0};
- FieldVector<double,dimworld> vertex1{0,1,1};
- FieldVector<double,dimworld> vertex2{1,0,0};
- factory.insertVertex(vertex0);
- factory.insertVertex(vertex1);
- factory.insertVertex(vertex2);
+ //Create a triangle that is not parallel to the planes formed by the coordinate axes
+ FieldVector<double,dimworld> vertex0{0,0,0};
+ FieldVector<double,dimworld> vertex1{0,1,1};
+ FieldVector<double,dimworld> vertex2{1,0,0};
+ factory.insertVertex(vertex0);
+ factory.insertVertex(vertex1);
+ factory.insertVertex(vertex2);
- factory.insertElement(triangle, {0,1,2});
+ factory.insertElement(triangle, {0,1,2});
- return std::unique_ptr<GridType>(factory.createGrid());
+ return std::unique_ptr<GridType>(factory.createGrid());
}
@@ -56,132 +56,134 @@ std::unique_ptr<GridType> makeSingleElementGrid()
template <class F1, class F2>
double calculateEnergy(const int numLevels, const F1 referenceConfigurationFunction, const F2 configurationFunction)
{
- ParameterTree materialParameters;
- materialParameters["thickness"] = "0.1";
- materialParameters["mu"] = "3.8462e+05";
- materialParameters["lambda"] = "2.7149e+05";
- materialParameters["mu_c"] = "0";
- materialParameters["L_c"] = "1e-3";
- materialParameters["q"] = "2.5";
- materialParameters["kappa"] = "0.1";
- materialParameters["b1"] = "1";
- materialParameters["b2"] = "1";
- materialParameters["b3"] = "1";
-
- const std::unique_ptr<GridType> grid = makeSingleElementGrid<GridType>();
- grid->globalRefine(numLevels-1);
- GridType::LeafGridView gridView = grid->leafGridView();
-
- using FEBasis = Dune::Functions::LagrangeBasis<typename GridType::LeafGridView,2>;
- FEBasis feBasis(gridView);
-
- using namespace Dune::Functions::BasisFactory;
- using namespace Dune::TypeTree::Indices;
-
- auto deformationPowerBasis = makeBasis(
- gridView,
- power<dimworld>(
- lagrange<2>()
- ));
-
- BlockVector<FieldVector<double,3> > helperVector1(feBasis.size());
- Dune::Functions::interpolate(deformationPowerBasis, helperVector1, referenceConfigurationFunction);
- auto stressFreeConfiguration = Dune::Functions::makeDiscreteGlobalBasisFunction<FieldVector<double,dimworld>>(deformationPowerBasis, helperVector1);
-
- NonplanarCosseratShellEnergy<FEBasis, 3, double, decltype(stressFreeConfiguration)> nonplanarCosseratShellEnergy(materialParameters,
- &stressFreeConfiguration,
- nullptr,
- nullptr,
- nullptr);
- BlockVector<TargetSpace> sol(feBasis.size());
- TupleVector<std::vector<RealTuple<double,3> >,
- std::vector<Rotation<double,3> > > solTuple;
- solTuple[_0].resize(feBasis.size());
- solTuple[_1].resize(feBasis.size());
-
- BlockVector<FieldVector<double,3> > helperVector2(feBasis.size());
- Dune::Functions::interpolate(deformationPowerBasis, helperVector2, configurationFunction);
- for (std::size_t i = 0; i < feBasis.size(); i++) {
- for (int j = 0; j < dimworld; j++)
- sol[i].r[j] = helperVector2[i][j];
-
- FieldVector<double,4> idRotation = {0, 0, 0, 1}; //set rotation = Id everywhere
- Rotation<double,dimworld> rotation(idRotation);
- FieldMatrix<double,dimworld,dimworld> rotationMatrix(0);
- rotation.matrix(rotationMatrix);
- sol[i].q.set(rotationMatrix);
- solTuple[_0][i] = sol[i].r;
- solTuple[_1][i] = sol[i].q;
- }
- CosseratVTKWriter<GridType>::write<FEBasis>(feBasis, solTuple, "configuration_l" + std::to_string(numLevels));
-
- double energy = 0;
- // A view on the FE basis on a single element
- auto localView = feBasis.localView();
- // Loop over all elements
- for (const auto& element : elements(feBasis.gridView(), Dune::Partitions::interior)) {
- localView.bind(element);
- // Number of degrees of freedom on this element
- size_t nDofs = localView.tree().size();
- std::vector<TargetSpace> localSolution(nDofs);
- for (size_t i=0; i<nDofs; i++)
- localSolution[i] = sol[localView.index(i)[0]];
- energy += nonplanarCosseratShellEnergy.energy(localView, localSolution);
- }
- return energy;
+ ParameterTree materialParameters;
+ materialParameters["thickness"] = "0.1";
+ materialParameters["mu"] = "3.8462e+05";
+ materialParameters["lambda"] = "2.7149e+05";
+ materialParameters["mu_c"] = "0";
+ materialParameters["L_c"] = "1e-3";
+ materialParameters["q"] = "2.5";
+ materialParameters["kappa"] = "0.1";
+ materialParameters["b1"] = "1";
+ materialParameters["b2"] = "1";
+ materialParameters["b3"] = "1";
+
+ const std::unique_ptr<GridType> grid = makeSingleElementGrid<GridType>();
+ grid->globalRefine(numLevels-1);
+ GridType::LeafGridView gridView = grid->leafGridView();
+
+ using FEBasis = Dune::Functions::LagrangeBasis<typename GridType::LeafGridView,2>;
+ FEBasis feBasis(gridView);
+
+ using namespace Dune::Functions::BasisFactory;
+ using namespace Dune::TypeTree::Indices;
+
+ auto deformationPowerBasis = makeBasis(
+ gridView,
+ power<dimworld>(
+ lagrange<2>()
+ ));
+
+ BlockVector<FieldVector<double,3> > helperVector1(feBasis.size());
+ Dune::Functions::interpolate(deformationPowerBasis, helperVector1, referenceConfigurationFunction);
+ auto stressFreeConfiguration = Dune::Functions::makeDiscreteGlobalBasisFunction<FieldVector<double,dimworld> >(deformationPowerBasis, helperVector1);
+
+ NonplanarCosseratShellEnergy<FEBasis, 3, double, decltype(stressFreeConfiguration)> nonplanarCosseratShellEnergy(materialParameters,
+ &stressFreeConfiguration,
+ nullptr,
+ nullptr,
+ nullptr);
+ BlockVector<TargetSpace> sol(feBasis.size());
+ TupleVector<std::vector<RealTuple<double,3> >,
+ std::vector<Rotation<double,3> > > solTuple;
+ solTuple[_0].resize(feBasis.size());
+ solTuple[_1].resize(feBasis.size());
+
+ BlockVector<FieldVector<double,3> > helperVector2(feBasis.size());
+ Dune::Functions::interpolate(deformationPowerBasis, helperVector2, configurationFunction);
+ for (std::size_t i = 0; i < feBasis.size(); i++) {
+ for (int j = 0; j < dimworld; j++)
+ sol[i].r[j] = helperVector2[i][j];
+
+ FieldVector<double,4> idRotation = {0, 0, 0, 1}; //set rotation = Id everywhere
+ Rotation<double,dimworld> rotation(idRotation);
+ FieldMatrix<double,dimworld,dimworld> rotationMatrix(0);
+ rotation.matrix(rotationMatrix);
+ sol[i].q.set(rotationMatrix);
+ solTuple[_0][i] = sol[i].r;
+ solTuple[_1][i] = sol[i].q;
+ }
+ CosseratVTKWriter<GridType>::write<FEBasis>(feBasis, solTuple, "configuration_l" + std::to_string(numLevels));
+
+ double energy = 0;
+ // A view on the FE basis on a single element
+ auto localView = feBasis.localView();
+ // Loop over all elements
+ for (const auto& element : elements(feBasis.gridView(), Dune::Partitions::interior)) {
+ localView.bind(element);
+ // Number of degrees of freedom on this element
+ size_t nDofs = localView.tree().size();
+ std::vector<TargetSpace> localSolution(nDofs);
+ for (size_t i=0; i<nDofs; i++)
+ localSolution[i] = sol[localView.index(i)[0]];
+ energy += nonplanarCosseratShellEnergy.energy(localView, localSolution);
+ }
+ return energy;
}
int main(int argc, char** argv)
{
- MPIHelper::instance(argc, argv);
- auto configurationId = [](FieldVector<double,dimworld> x){ return x; };
- auto configurationStretchY = [](FieldVector<double,dimworld> x){
- auto out = x;
- out[1] *= 2;
- return out;
- };
-
- auto configurationTwist = [](FieldVector<double,dimworld> x){
- auto out = x;
- out[1] = x[2];
- out[2] = -x[1];
- return out;
- };
-
- auto configurationCurved = [](FieldVector<double,dimworld> x){
- auto out = x;
- out[1] = x[2];
- out[2] = -x[1];
- return out;
- };
- auto configurationSquare = [](FieldVector<double,dimworld> x){
- auto out = x;
- out[1] += x[1]*x[1];
- return out;
- };
-
- auto configurationSin = [](FieldVector<double,dimworld> x){
- auto out = x;
- out[2] = sin(x[2]);
- return out;
- };
-
- double energyFine = calculateEnergy(2, configurationId, configurationStretchY);
- double energyCoarse = calculateEnergy(1, configurationId, configurationStretchY);
- assert(std::abs(energyFine - energyCoarse) < 1e-3);
-
- double energyForZeroDifference = calculateEnergy(1,configurationId,configurationId);
- assert(std::abs(energyForZeroDifference) < 1e-3);
-
- double energyForZeroDifference2 = calculateEnergy(1,configurationStretchY,configurationStretchY);
- assert(std::abs(energyForZeroDifference2) < 1e-3);
-
- double energyForZeroDifference3 = calculateEnergy(1,configurationTwist,configurationTwist);
- assert(std::abs(energyForZeroDifference3) < 1e-3);
-
- double energyForZeroDifference4 = calculateEnergy(1,configurationSquare,configurationSquare);
- assert(std::abs(energyForZeroDifference4) < 1e-3);
-
- double energyForZeroDifference5 = calculateEnergy(1,configurationSin,configurationSin);
- assert(std::abs(energyForZeroDifference5) < 1e-3);
+ MPIHelper::instance(argc, argv);
+ auto configurationId = [](FieldVector<double,dimworld> x){
+ return x;
+ };
+ auto configurationStretchY = [](FieldVector<double,dimworld> x){
+ auto out = x;
+ out[1] *= 2;
+ return out;
+ };
+
+ auto configurationTwist = [](FieldVector<double,dimworld> x){
+ auto out = x;
+ out[1] = x[2];
+ out[2] = -x[1];
+ return out;
+ };
+
+ auto configurationCurved = [](FieldVector<double,dimworld> x){
+ auto out = x;
+ out[1] = x[2];
+ out[2] = -x[1];
+ return out;
+ };
+ auto configurationSquare = [](FieldVector<double,dimworld> x){
+ auto out = x;
+ out[1] += x[1]*x[1];
+ return out;
+ };
+
+ auto configurationSin = [](FieldVector<double,dimworld> x){
+ auto out = x;
+ out[2] = sin(x[2]);
+ return out;
+ };
+
+ double energyFine = calculateEnergy(2, configurationId, configurationStretchY);
+ double energyCoarse = calculateEnergy(1, configurationId, configurationStretchY);
+ assert(std::abs(energyFine - energyCoarse) < 1e-3);
+
+ double energyForZeroDifference = calculateEnergy(1,configurationId,configurationId);
+ assert(std::abs(energyForZeroDifference) < 1e-3);
+
+ double energyForZeroDifference2 = calculateEnergy(1,configurationStretchY,configurationStretchY);
+ assert(std::abs(energyForZeroDifference2) < 1e-3);
+
+ double energyForZeroDifference3 = calculateEnergy(1,configurationTwist,configurationTwist);
+ assert(std::abs(energyForZeroDifference3) < 1e-3);
+
+ double energyForZeroDifference4 = calculateEnergy(1,configurationSquare,configurationSquare);
+ assert(std::abs(energyForZeroDifference4) < 1e-3);
+
+ double energyForZeroDifference5 = calculateEnergy(1,configurationSin,configurationSin);
+ assert(std::abs(energyForZeroDifference5) < 1e-3);
}
diff --git a/test/orthogonalmatrixtest.cc b/test/orthogonalmatrixtest.cc
index 31f13e67..c1e0ac2c 100644
--- a/test/orthogonalmatrixtest.cc
+++ b/test/orthogonalmatrixtest.cc
@@ -7,7 +7,7 @@
/** \file
\brief Unit tests for the OrthogonalMatrix class
-*/
+ */
using namespace Dune;
@@ -18,88 +18,88 @@ double eps = 1e-6;
template <class T, int N>
void testOrthogonality(const OrthogonalMatrix<T,N>& p)
{
- Dune::FieldMatrix<T,N,N> prod(0);
- for (int i=0; i<N; i++)
- for (int j=0; j<N; j++)
- for (int k=0; k<N; k++)
- prod[i][j] += p.data()[k][i] * p.data()[k][j];
-
- for (int i=0; i<N; i++)
- for (int j=0; j<N; j++)
- if ( std::abs(prod[i][j] - (i==j) ) > eps)
- DUNE_THROW(Exception, "Matrix is not orthogonal");
+ Dune::FieldMatrix<T,N,N> prod(0);
+ for (int i=0; i<N; i++)
+ for (int j=0; j<N; j++)
+ for (int k=0; k<N; k++)
+ prod[i][j] += p.data()[k][i] * p.data()[k][j];
+
+ for (int i=0; i<N; i++)
+ for (int j=0; j<N; j++)
+ if ( std::abs(prod[i][j] - (i==j) ) > eps)
+ DUNE_THROW(Exception, "Matrix is not orthogonal");
}
-
+
/** \brief Test orthogonal projection onto the tangent space at p
*/
template <class T, int N>
void testProjectionOntoTangentSpace(const OrthogonalMatrix<T,N>& p)
{
- std::vector<FieldMatrix<T,N,N> > testVectors;
- ValueFactory<FieldMatrix<T,N,N> >::get(testVectors);
-
- // Test each element in the list
- for (size_t i=0; i<testVectors.size(); i++) {
-
- // get projection
- FieldMatrix<T,N,N> projected = p.projectOntoTangentSpace(testVectors[i]);
-
- // Test whether the tangent vector is really tangent.
- // The tangent space at q consist of all matrices of the form q * (a skew matrix).
- // Hence we left-multiply by q^T and check whether the result is skew-symmetric.
- FieldMatrix<T,N,N> skewPart(0);
- for (int j=0; j<N; j++)
- for (int k=0; k<N; k++)
- for (int l=0; l<N; l++)
- skewPart[j][k] += p.data()[l][j] * projected[l][k];
-
- // is it skew?
- for (int j=0; j<N; j++)
- for (int k=0; k<=j; k++)
- if ( std::abs(skewPart[j][k] + skewPart[k][j]) > eps ) {
-
- std::cout << "matrix is not skew-symmetric\n" << skewPart << std::endl;
- abort();
-
- }
- }
-
-
+ std::vector<FieldMatrix<T,N,N> > testVectors;
+ ValueFactory<FieldMatrix<T,N,N> >::get(testVectors);
+
+ // Test each element in the list
+ for (size_t i=0; i<testVectors.size(); i++) {
+
+ // get projection
+ FieldMatrix<T,N,N> projected = p.projectOntoTangentSpace(testVectors[i]);
+
+ // Test whether the tangent vector is really tangent.
+ // The tangent space at q consist of all matrices of the form q * (a skew matrix).
+ // Hence we left-multiply by q^T and check whether the result is skew-symmetric.
+ FieldMatrix<T,N,N> skewPart(0);
+ for (int j=0; j<N; j++)
+ for (int k=0; k<N; k++)
+ for (int l=0; l<N; l++)
+ skewPart[j][k] += p.data()[l][j] * projected[l][k];
+
+ // is it skew?
+ for (int j=0; j<N; j++)
+ for (int k=0; k<=j; k++)
+ if ( std::abs(skewPart[j][k] + skewPart[k][j]) > eps ) {
+
+ std::cout << "matrix is not skew-symmetric\n" << skewPart << std::endl;
+ abort();
+
+ }
+ }
+
+
}
template <class T, int N>
void test()
{
- std::cout << "Testing class " << className<OrthogonalMatrix<T,N> >() << std::endl;
-
- // Get set of orthogonal test matrices
- std::vector<OrthogonalMatrix<T,N> > testPoints;
- ValueFactory<OrthogonalMatrix<T,N> >::get(testPoints);
-
- int nTestPoints = testPoints.size();
-
- // Test each element in the list
- for (int i=0; i<nTestPoints; i++) {
-
- // Test whether the matrix really is orthogonal
- testOrthogonality(testPoints[i]);
-
- testProjectionOntoTangentSpace(testPoints[i]);
-
- }
-
+ std::cout << "Testing class " << className<OrthogonalMatrix<T,N> >() << std::endl;
+
+ // Get set of orthogonal test matrices
+ std::vector<OrthogonalMatrix<T,N> > testPoints;
+ ValueFactory<OrthogonalMatrix<T,N> >::get(testPoints);
+
+ int nTestPoints = testPoints.size();
+
+ // Test each element in the list
+ for (int i=0; i<nTestPoints; i++) {
+
+ // Test whether the matrix really is orthogonal
+ testOrthogonality(testPoints[i]);
+
+ testProjectionOntoTangentSpace(testPoints[i]);
+
+ }
+
}
int main() try
{
- test<double,1>();
- test<double,2>();
- test<double,3>();
-
-} catch (Exception& e) {
-
- std::cout << e.what() << std::endl;
+ test<double,1>();
+ test<double,2>();
+ test<double,3>();
}
+catch (Exception& e) {
+ std::cout << e.what() << std::endl;
+
+}
diff --git a/test/polardecompositiontest.cc b/test/polardecompositiontest.cc
index b4c87f6a..7ab8a775 100644
--- a/test/polardecompositiontest.cc
+++ b/test/polardecompositiontest.cc
@@ -7,7 +7,7 @@
#include <chrono>
#include <fstream>
-#include <random>
+#include <random>
using namespace Dune;
@@ -15,228 +15,228 @@ using field_type = double;
class PolarDecompositionTest : public Dune::GFE::HighamNoferiniPolarDecomposition {
- public:
- using HighamNoferiniPolarDecomposition::HighamNoferiniPolarDecomposition;
- using HighamNoferiniPolarDecomposition::bilinearMatrix;
- using HighamNoferiniPolarDecomposition::determinantLaplace;
- using HighamNoferiniPolarDecomposition::dominantEVNewton;
- using HighamNoferiniPolarDecomposition::characteristicCoefficients;
- using HighamNoferiniPolarDecomposition::obtainQuaternion;
+public:
+ using HighamNoferiniPolarDecomposition::HighamNoferiniPolarDecomposition;
+ using HighamNoferiniPolarDecomposition::bilinearMatrix;
+ using HighamNoferiniPolarDecomposition::determinantLaplace;
+ using HighamNoferiniPolarDecomposition::dominantEVNewton;
+ using HighamNoferiniPolarDecomposition::characteristicCoefficients;
+ using HighamNoferiniPolarDecomposition::obtainQuaternion;
};
/** \brief Check if the matrix is not orthogonal */
static bool isNotOrthogonal(const FieldMatrix<field_type,3,3>& matrix) {
- bool notOrthogonal = std::abs(1-matrix.determinant()) > 1e-12;
- notOrthogonal = notOrthogonal or (( matrix[0]*matrix[1] ) > 1e-12);
- notOrthogonal = notOrthogonal or (( matrix[0]*matrix[2] ) > 1e-12);
- notOrthogonal = notOrthogonal or (( matrix[1]*matrix[2] ) > 1e-12);
- return notOrthogonal;
+ bool notOrthogonal = std::abs(1-matrix.determinant()) > 1e-12;
+ notOrthogonal = notOrthogonal or (( matrix[0]*matrix[1] ) > 1e-12);
+ notOrthogonal = notOrthogonal or (( matrix[0]*matrix[2] ) > 1e-12);
+ notOrthogonal = notOrthogonal or (( matrix[1]*matrix[2] ) > 1e-12);
+ return notOrthogonal;
}
/** \brief Return the time needed for 1000 polar decompositions of the given matrix using the iterative algorithm
and the algorithm by Higham. */
static FieldVector<field_type,2> measureTimeForPolarDecomposition(const FieldMatrix<field_type, 3, 3>& matrix, double tol = 10e-3)
{
- FieldMatrix<field_type, 3, 3> Q1;
- FieldMatrix<field_type, 3, 3> Q2;
- FieldVector<field_type,2> actualtime;
- std::chrono::steady_clock::time_point begindecomold = std::chrono::steady_clock::now();
- for (int i = 0; i < 1000; ++i) {
- Q1 = Dune::GFE::PolarDecomposition()(matrix, tol);
- }
- std::chrono::steady_clock::time_point enddecomold = std::chrono::steady_clock::now();
- actualtime[0] = (enddecomold - begindecomold).count();
-
- std::chrono::steady_clock::time_point begindecom = std::chrono::steady_clock::now();
- for (int i = 0; i < 1000; ++i) {
- Q2 = Dune::GFE::HighamNoferiniPolarDecomposition()(matrix, tol, tol);
- }
- std::chrono::steady_clock::time_point enddecom = std::chrono::steady_clock::now();
- actualtime[1] = (enddecom - begindecom).count();
- return actualtime;
+ FieldMatrix<field_type, 3, 3> Q1;
+ FieldMatrix<field_type, 3, 3> Q2;
+ FieldVector<field_type,2> actualtime;
+ std::chrono::steady_clock::time_point begindecomold = std::chrono::steady_clock::now();
+ for (int i = 0; i < 1000; ++i) {
+ Q1 = Dune::GFE::PolarDecomposition()(matrix, tol);
+ }
+ std::chrono::steady_clock::time_point enddecomold = std::chrono::steady_clock::now();
+ actualtime[0] = (enddecomold - begindecomold).count();
+
+ std::chrono::steady_clock::time_point begindecom = std::chrono::steady_clock::now();
+ for (int i = 0; i < 1000; ++i) {
+ Q2 = Dune::GFE::HighamNoferiniPolarDecomposition()(matrix, tol, tol);
+ }
+ std::chrono::steady_clock::time_point enddecom = std::chrono::steady_clock::now();
+ actualtime[1] = (enddecom - begindecom).count();
+ return actualtime;
}
/** \brief Returns a 3x3-Matrix with random entries between 0 and upper Bound*/
static FieldMatrix<field_type, 3, 3> randomMatrix3d(double upperBound = 1.0)
{
- const int dim = 3;
- FieldMatrix<field_type, dim, dim> matrix;
- std::random_device rd; // Will be used to obtain a seed for the random number engine
- std::mt19937 gen(rd()); // Standard mersenne_twister_engine seeded with rd()
- std::uniform_real_distribution<> dis(0.0, upperBound); // equally distributed between 0 and upper bound
- for (int i = 0; i < dim; ++i)
- for (int j = 0; j < dim; ++j)
- matrix[i][j] = dis(gen);
-
- return matrix;
+ const int dim = 3;
+ FieldMatrix<field_type, dim, dim> matrix;
+ std::random_device rd; // Will be used to obtain a seed for the random number engine
+ std::mt19937 gen(rd()); // Standard mersenne_twister_engine seeded with rd()
+ std::uniform_real_distribution<> dis(0.0, upperBound); // equally distributed between 0 and upper bound
+ for (int i = 0; i < dim; ++i)
+ for (int j = 0; j < dim; ++j)
+ matrix[i][j] = dis(gen);
+
+ return matrix;
}
/** \brief Returns an "almost orthogonal" 3x3-Matrix where a random perturbation
between 0 and maxPerturbation is added to each entry.*/
static FieldMatrix<field_type, 3, 3> randomMatrixAlmostOrthogonal(double maxPerturbation = 0.1)
{
- const int dim = 3;
- FieldVector<field_type,4> f;
- std::random_device rd; // Will be used to obtain a seed for the random number engine
- std::mt19937 gen(rd()); // Standard mersenne_twister_engine seeded with rd()
- std::uniform_real_distribution<> dis(0.0, 1.0); // equally distributed between 0 and upper bound
- for (int i = 0; i < 4; ++i)
- f[i] = dis(gen);
- Rotation<field_type,3> q(f);
- q.normalize();
-
- assert(std::abs(1-q.two_norm()) < 1e-12);
-
- // Turn it into a matrix
- FieldMatrix<double,3,3> matrix;
- q.matrix(matrix);
-
- if (isNotOrthogonal(matrix))
- DUNE_THROW(Exception, "Expected the matrix " << matrix << " to be orthogonal, but it is not!");
-
- //Now perturb this a little bit
- for (int i = 0; i < dim; ++i)
- for (int j = 0; j < dim; ++j)
- matrix[i][j] += dis(gen)*maxPerturbation;
- return matrix;
+ const int dim = 3;
+ FieldVector<field_type,4> f;
+ std::random_device rd; // Will be used to obtain a seed for the random number engine
+ std::mt19937 gen(rd()); // Standard mersenne_twister_engine seeded with rd()
+ std::uniform_real_distribution<> dis(0.0, 1.0); // equally distributed between 0 and upper bound
+ for (int i = 0; i < 4; ++i)
+ f[i] = dis(gen);
+ Rotation<field_type,3> q(f);
+ q.normalize();
+
+ assert(std::abs(1-q.two_norm()) < 1e-12);
+
+ // Turn it into a matrix
+ FieldMatrix<double,3,3> matrix;
+ q.matrix(matrix);
+
+ if (isNotOrthogonal(matrix))
+ DUNE_THROW(Exception, "Expected the matrix " << matrix << " to be orthogonal, but it is not!");
+
+ //Now perturb this a little bit
+ for (int i = 0; i < dim; ++i)
+ for (int j = 0; j < dim; ++j)
+ matrix[i][j] += dis(gen)*maxPerturbation;
+ return matrix;
}
static double timeTest(double perturbationFromSO3 = 1.0) {
- // Define matrices we want to use for testing
- int numberOfTests = 100;
- std::vector<double> timeOld(numberOfTests);
- std::vector<double> timeNew(numberOfTests);
- double totalTimeOld = 0;
- double totalTimeNew = 0;
-
- for (int j = 0; j < numberOfTests; ++j) { // testing loop
- FieldMatrix<field_type,3,3> N;
- // Only measure the time if the decomposition is unique and if both algorithms will return an orthogonal matrix!
- // Attention: For matrices that are quite far away from an orthogonal matrix, Dune::GFE::PolarDecomposition() might return a matrix with determinant = -1 !
- double normOfDifference = 10;
- FieldMatrix<field_type,3,3> Q1;
- FieldMatrix<field_type,3,3> Q2;
- while(isNotOrthogonal(Q1) or isNotOrthogonal(Q2) or normOfDifference > 0.001) {
- N = randomMatrixAlmostOrthogonal(perturbationFromSO3);
- Q1 = PolarDecompositionTest()(N);
- Q2 = Dune::GFE::PolarDecomposition()(N);
- normOfDifference = (Q1-Q2).frobenius_norm();
- }
- auto actualtime = measureTimeForPolarDecomposition(N);
- timeOld[j] = actualtime[0];
- timeNew[j] = actualtime[1];
+ // Define matrices we want to use for testing
+ int numberOfTests = 100;
+ std::vector<double> timeOld(numberOfTests);
+ std::vector<double> timeNew(numberOfTests);
+ double totalTimeOld = 0;
+ double totalTimeNew = 0;
+
+ for (int j = 0; j < numberOfTests; ++j) { // testing loop
+ FieldMatrix<field_type,3,3> N;
+ // Only measure the time if the decomposition is unique and if both algorithms will return an orthogonal matrix!
+ // Attention: For matrices that are quite far away from an orthogonal matrix, Dune::GFE::PolarDecomposition() might return a matrix with determinant = -1 !
+ double normOfDifference = 10;
+ FieldMatrix<field_type,3,3> Q1;
+ FieldMatrix<field_type,3,3> Q2;
+ while(isNotOrthogonal(Q1) or isNotOrthogonal(Q2) or normOfDifference > 0.001) {
+ N = randomMatrixAlmostOrthogonal(perturbationFromSO3);
+ Q1 = PolarDecompositionTest()(N);
+ Q2 = Dune::GFE::PolarDecomposition()(N);
+ normOfDifference = (Q1-Q2).frobenius_norm();
}
-
- std::sort(timeOld.begin(), timeOld.end());
- std::sort(timeNew.begin(), timeNew.end());
-
- for (int j = 0; j < numberOfTests; ++j) {
- totalTimeOld += timeOld[j];
- totalTimeNew += timeNew[j];
- }
- std::cout << "Perturbation from an orthogonal matrix: " << perturbationFromSO3 << std::endl;
- std::cout << "Average (old): " << totalTimeOld/numberOfTests << "[ns]" << std::endl;
- std::cout << "Average (new): " << totalTimeNew/numberOfTests << "[ns]" << std::endl;
- std::cout << "Relative: " << totalTimeOld/totalTimeNew << std::endl << std::endl;
-
- return totalTimeOld/totalTimeNew;
+ auto actualtime = measureTimeForPolarDecomposition(N);
+ timeOld[j] = actualtime[0];
+ timeNew[j] = actualtime[1];
+ }
+
+ std::sort(timeOld.begin(), timeOld.end());
+ std::sort(timeNew.begin(), timeNew.end());
+
+ for (int j = 0; j < numberOfTests; ++j) {
+ totalTimeOld += timeOld[j];
+ totalTimeNew += timeNew[j];
+ }
+ std::cout << "Perturbation from an orthogonal matrix: " << perturbationFromSO3 << std::endl;
+ std::cout << "Average (old): " << totalTimeOld/numberOfTests << "[ns]" << std::endl;
+ std::cout << "Average (new): " << totalTimeNew/numberOfTests << "[ns]" << std::endl;
+ std::cout << "Relative: " << totalTimeOld/totalTimeNew << std::endl << std::endl;
+
+ return totalTimeOld/totalTimeNew;
}
static bool testBilinearMatrix() {
- FieldMatrix<field_type,3,3> M = { { 20, 0, -3 },
- { 3, 2.0, 310 },
- { 5, 0.22, 0 } };
- M /= M.frobenius_norm();
- FieldMatrix<field_type,4,4> B = { { 0.0096632, 0.997822, 0.0257685, 0.00644213 },
- { 0.997822, -0.00322107, 0.0708635, 0.00644213 },
- { 0.0257685, 0.0708635, 0.00322107, 0.999239 },
- { 0.00644213, 0.00644213, 0.999239, -0.0096632 } };
- auto Btest = PolarDecompositionTest::bilinearMatrix(M);
- Btest -= B;
- return Btest.frobenius_norm() < 0.001;
+ FieldMatrix<field_type,3,3> M = { { 20, 0, -3 },
+ { 3, 2.0, 310 },
+ { 5, 0.22, 0 } };
+ M /= M.frobenius_norm();
+ FieldMatrix<field_type,4,4> B = { { 0.0096632, 0.997822, 0.0257685, 0.00644213 },
+ { 0.997822, -0.00322107, 0.0708635, 0.00644213 },
+ { 0.0257685, 0.0708635, 0.00322107, 0.999239 },
+ { 0.00644213, 0.00644213, 0.999239, -0.0096632 } };
+ auto Btest = PolarDecompositionTest::bilinearMatrix(M);
+ Btest -= B;
+ return Btest.frobenius_norm() < 0.001;
}
static bool test4dDeterminant() {
- FieldMatrix<field_type,4,4> B = { { 0.0096632, 0.997822, 0.0257685, 0.00644213 },
- { 0.997822, -0.00322107, 0.0708635, 0.00644213 },
- { 0.0257685, 0.0708635, 0.00322107, 0.999239 },
- { 0.00644213, 0.00644213, 0.999239, -0.0096632 } };
- double detBtest = PolarDecompositionTest::determinantLaplace(B);
- detBtest -= B.determinant();
- return std::abs(detBtest) < 0.001;
+ FieldMatrix<field_type,4,4> B = { { 0.0096632, 0.997822, 0.0257685, 0.00644213 },
+ { 0.997822, -0.00322107, 0.0708635, 0.00644213 },
+ { 0.0257685, 0.0708635, 0.00322107, 0.999239 },
+ { 0.00644213, 0.00644213, 0.999239, -0.0096632 } };
+ double detBtest = PolarDecompositionTest::determinantLaplace(B);
+ detBtest -= B.determinant();
+ return std::abs(detBtest) < 0.001;
}
static bool testdominantEVNewton() {
- field_type detB = 0.992928;
- FieldVector<field_type,3> minpol = {0, -1.99999, -0.00496083};
- double correctDominantEV = 1.05397;
+ field_type detB = 0.992928;
+ FieldVector<field_type,3> minpol = {0, -1.99999, -0.00496083};
+ double correctDominantEV = 1.05397;
- auto dominantEVNewton = PolarDecompositionTest::dominantEVNewton(minpol, detB);
- return std::abs(correctDominantEV - dominantEVNewton) < 0.001;
+ auto dominantEVNewton = PolarDecompositionTest::dominantEVNewton(minpol, detB);
+ return std::abs(correctDominantEV - dominantEVNewton) < 0.001;
}
static bool testCharacteristicPolynomial4D() {
- FieldMatrix<field_type,4,4> B = { { 0.0096632, 0.997822, 0.0257685, 0.00644213 },
- { 0.997822, -0.00322107, 0.0708635, 0.00644213 },
- { 0.0257685, 0.0708635, 0.00322107, 0.999239 },
- { 0.00644213, 0.00644213, 0.999239, -0.0096632 } };
- FieldVector<field_type,3> minpol = {0, -1.99999, -0.00496083};
-
- auto coefficients = PolarDecompositionTest::characteristicCoefficients(B);
- coefficients -= minpol;
- return coefficients.two_norm() < 0.001;
+ FieldMatrix<field_type,4,4> B = { { 0.0096632, 0.997822, 0.0257685, 0.00644213 },
+ { 0.997822, -0.00322107, 0.0708635, 0.00644213 },
+ { 0.0257685, 0.0708635, 0.00322107, 0.999239 },
+ { 0.00644213, 0.00644213, 0.999239, -0.0096632 } };
+ FieldVector<field_type,3> minpol = {0, -1.99999, -0.00496083};
+
+ auto coefficients = PolarDecompositionTest::characteristicCoefficients(B);
+ coefficients -= minpol;
+ return coefficients.two_norm() < 0.001;
}
static bool testQuaternionFunction() {
- FieldMatrix<field_type,4,4> BS = { { 1.04431, -0.997822, -0.0257685, -0.00644213 },
- { -0.997822, 1.05719, -0.0708635, -0.00644213 },
- { -0.0257685, -0.0708635, 1.05075, -0.999239 },
- { -0.00644213, -0.00644213, -0.999239, 1.06363 } };
-
- FieldVector<field_type, 4 > v = { 0.508566, 0.516353, 0.499062, 0.475055 };
- auto vtest = PolarDecompositionTest::obtainQuaternion(BS);
- vtest -= v;
- return vtest.two_norm() < 0.001;
+ FieldMatrix<field_type,4,4> BS = { { 1.04431, -0.997822, -0.0257685, -0.00644213 },
+ { -0.997822, 1.05719, -0.0708635, -0.00644213 },
+ { -0.0257685, -0.0708635, 1.05075, -0.999239 },
+ { -0.00644213, -0.00644213, -0.999239, 1.06363 } };
+
+ FieldVector<field_type, 4 > v = { 0.508566, 0.516353, 0.499062, 0.475055 };
+ auto vtest = PolarDecompositionTest::obtainQuaternion(BS);
+ vtest -= v;
+ return vtest.two_norm() < 0.001;
}
int main (int argc, char *argv[]) try
{
- //test the correctness of the algorithm
- auto testMatrix = randomMatrix3d();
- auto Q = PolarDecompositionTest()(testMatrix,1e-12,1e-12);
- if (isNotOrthogonal(Q)) {
- std::cerr << "The polar decomposition did not return an orthogonal matrix when decomposing: " << std::endl << testMatrix << std::endl;
- return 1;
- }
+ //test the correctness of the algorithm
+ auto testMatrix = randomMatrix3d();
+ auto Q = PolarDecompositionTest()(testMatrix,1e-12,1e-12);
+ if (isNotOrthogonal(Q)) {
+ std::cerr << "The polar decomposition did not return an orthogonal matrix when decomposing: " << std::endl << testMatrix << std::endl;
+ return 1;
+ }
+
+ if (testBilinearMatrix()) {
+ std::cerr << "The test calculation of the bilinearMatrix is wrong!" << std::endl;
+ return 1;
+ }
+ if (!test4dDeterminant()) {
+ std::cerr << "The test calculation of the 4d determinant is wrong!" << std::endl;
+ return 1;
+ }
+ if (!testdominantEVNewton()) {
+ std::cerr << "The test calculation of the dominant eigenvalue is wrong!" << std::endl;
+ return 1;
+ }
+ if (!testCharacteristicPolynomial4D()) {
+ std::cerr << "The test calculation of the characteristic polynomial is wrong!" << std::endl;
+ return 1;
+ }
+ if (!testQuaternionFunction()) {
+ std::cerr << "The test calculation of the quaternion function is wrong!" << std::endl;
+ return 1;
+ }
+
+ timeTest(.1);
+ timeTest(2);
+ timeTest(30);
+
+ return 0;
- if (testBilinearMatrix()) {
- std::cerr << "The test calculation of the bilinearMatrix is wrong!" << std::endl;
- return 1;
- }
- if (!test4dDeterminant()) {
- std::cerr << "The test calculation of the 4d determinant is wrong!" << std::endl;
- return 1;
- }
- if (!testdominantEVNewton()) {
- std::cerr << "The test calculation of the dominant eigenvalue is wrong!" << std::endl;
- return 1;
- }
- if (!testCharacteristicPolynomial4D()) {
- std::cerr << "The test calculation of the characteristic polynomial is wrong!" << std::endl;
- return 1;
- }
- if (!testQuaternionFunction()) {
- std::cerr << "The test calculation of the quaternion function is wrong!" << std::endl;
- return 1;
- }
-
- timeTest(.1);
- timeTest(2);
- timeTest(30);
-
- return 0;
-
-} catch (Exception& e) {
- std::cout << e.what() << std::endl;
}
-
+catch (Exception& e) {
+ std::cout << e.what() << std::endl;
+}
diff --git a/test/rigidbodymotiontest.cc b/test/rigidbodymotiontest.cc
index d82cb23f..af824ad2 100644
--- a/test/rigidbodymotiontest.cc
+++ b/test/rigidbodymotiontest.cc
@@ -22,78 +22,78 @@ using namespace Dune;
template <int domainDim,class LocalFiniteElement>
Tensor3<double,3,3,domainDim> evaluateDerivativeFD(const LocalGeodesicFEFunction<domainDim,double,LocalFiniteElement,TargetSpace>& f,
- const Dune::FieldVector<double,domainDim>& local)
+ const Dune::FieldVector<double,domainDim>& local)
{
const double stepSize = std::sqrt(std::numeric_limits<double>::epsilon());
- Tensor3<double,3,3,domainDim> result(0);
-
- for (int i=0; i<domainDim; i++) {
-
- Dune::FieldVector<double, domainDim> forward = local;
- Dune::FieldVector<double, domainDim> backward = local;
-
- forward[i] += stepSize;
- backward[i] -= stepSize;
-
- TargetSpace forwardValue = f.evaluate(forward);
- TargetSpace backwardValue = f.evaluate(backward);
-
- FieldMatrix<double,3,3> forwardMatrix, backwardMatrix;
- forwardValue.q.matrix(forwardMatrix);
- backwardValue.q.matrix(backwardMatrix);
-
- FieldMatrix<double,3,3> fdDer = (forwardMatrix - backwardMatrix) / (2*stepSize);
-
- for (int j=0; j<3; j++)
- for (int k=0; k<3; k++)
- result[j][k][i] = fdDer[j][k];
-
- }
+ Tensor3<double,3,3,domainDim> result(0);
+
+ for (int i=0; i<domainDim; i++) {
+
+ Dune::FieldVector<double, domainDim> forward = local;
+ Dune::FieldVector<double, domainDim> backward = local;
+
+ forward[i] += stepSize;
+ backward[i] -= stepSize;
+
+ TargetSpace forwardValue = f.evaluate(forward);
+ TargetSpace backwardValue = f.evaluate(backward);
+
+ FieldMatrix<double,3,3> forwardMatrix, backwardMatrix;
+ forwardValue.q.matrix(forwardMatrix);
+ backwardValue.q.matrix(backwardMatrix);
- return result;
+ FieldMatrix<double,3,3> fdDer = (forwardMatrix - backwardMatrix) / (2*stepSize);
+
+ for (int j=0; j<3; j++)
+ for (int k=0; k<3; k++)
+ result[j][k][i] = fdDer[j][k];
+
+ }
+
+ return result;
}
template <int domainDim>
void testDerivativeOfRotationMatrix(const std::vector<TargetSpace>& corners)
{
- // Make local fe function to be tested
- LagrangeLocalFiniteElementCache<double,double,domainDim,1> feCache;
- typedef typename LagrangeLocalFiniteElementCache<double,double,domainDim,1>::FiniteElementType LocalFiniteElement;
-
- LocalGeodesicFEFunction<domainDim,double,LocalFiniteElement, TargetSpace> f(feCache.get(GeometryTypes::simplex(domainDim)), corners);
-
- // A quadrature rule as a set of test points
- int quadOrder = 3;
-
- const auto& quad = Dune::QuadratureRules<double, domainDim>::rule(GeometryTypes::simplex(domainDim), quadOrder);
-
- for (size_t pt=0; pt<quad.size(); pt++) {
-
- const Dune::FieldVector<double,domainDim>& quadPos = quad[pt].position();
-
- // evaluate actual derivative
- Dune::FieldMatrix<double, TargetSpace::EmbeddedTangentVector::dimension, domainDim> derivative = f.evaluateDerivative(quadPos);
-
- Tensor3<double,3,3,domainDim> DR = f.evaluate(quadPos).quaternionTangentToMatrixTangent(derivative);
-
- // evaluate fd approximation of derivative
- Tensor3<double,3,3,domainDim> DR_fd = evaluateDerivativeFD(f,quadPos);
-
- double maxDiff = 0;
- for (int i=0; i<3; i++)
- for (int j=0; j<3; j++)
- for (int k=0; k<domainDim; k++)
- maxDiff = std::max(maxDiff, std::abs(DR[i][j][k] - DR_fd[i][j][k]));
-
- if ( maxDiff > 100*eps ) {
- std::cout << className(corners[0]) << ": Analytical gradient does not match fd approximation." << std::endl;
- std::cout << "Analytical:\n " << DR << std::endl;
- std::cout << "FD :\n " << DR_fd << std::endl;
- assert(false);
- }
+ // Make local fe function to be tested
+ LagrangeLocalFiniteElementCache<double,double,domainDim,1> feCache;
+ typedef typename LagrangeLocalFiniteElementCache<double,double,domainDim,1>::FiniteElementType LocalFiniteElement;
+
+ LocalGeodesicFEFunction<domainDim,double,LocalFiniteElement, TargetSpace> f(feCache.get(GeometryTypes::simplex(domainDim)), corners);
+ // A quadrature rule as a set of test points
+ int quadOrder = 3;
+
+ const auto& quad = Dune::QuadratureRules<double, domainDim>::rule(GeometryTypes::simplex(domainDim), quadOrder);
+
+ for (size_t pt=0; pt<quad.size(); pt++) {
+
+ const Dune::FieldVector<double,domainDim>& quadPos = quad[pt].position();
+
+ // evaluate actual derivative
+ Dune::FieldMatrix<double, TargetSpace::EmbeddedTangentVector::dimension, domainDim> derivative = f.evaluateDerivative(quadPos);
+
+ Tensor3<double,3,3,domainDim> DR = f.evaluate(quadPos).quaternionTangentToMatrixTangent(derivative);
+
+ // evaluate fd approximation of derivative
+ Tensor3<double,3,3,domainDim> DR_fd = evaluateDerivativeFD(f,quadPos);
+
+ double maxDiff = 0;
+ for (int i=0; i<3; i++)
+ for (int j=0; j<3; j++)
+ for (int k=0; k<domainDim; k++)
+ maxDiff = std::max(maxDiff, std::abs(DR[i][j][k] - DR_fd[i][j][k]));
+
+ if ( maxDiff > 100*eps ) {
+ std::cout << className(corners[0]) << ": Analytical gradient does not match fd approximation." << std::endl;
+ std::cout << "Analytical:\n " << DR << std::endl;
+ std::cout << "FD :\n " << DR_fd << std::endl;
+ assert(false);
}
+
+ }
}
int main(int argc, char** argv)
@@ -121,9 +121,9 @@ int main(int argc, char** argv)
for (int i=0; i<numIndices; i++, ++index)
{
- for (int j=0; j<domainDim+1; j++)
- corners[j].q = testPoints[index[j]];
+ for (int j=0; j<domainDim+1; j++)
+ corners[j].q = testPoints[index[j]];
- testDerivativeOfRotationMatrix<domainDim>(corners);
+ testDerivativeOfRotationMatrix<domainDim>(corners);
}
}
diff --git a/test/rotationtest.cc b/test/rotationtest.cc
index aa67c616..f95ac20a 100644
--- a/test/rotationtest.cc
+++ b/test/rotationtest.cc
@@ -12,264 +12,265 @@ using namespace Dune;
void testDDExp()
{
- std::array<FieldVector<double,3>, 125> v;
- int ct = 0;
- double eps = 1e-4;
-
- for (int i=-2; i<3; i++)
- for (int j=-2; j<3; j++)
- for (int k=-2; k<3; k++) {
- v[ct][0] = i;
- v[ct][1] = j;
- v[ct][2] = k;
- ct++;
- }
-
- for (size_t i=0; i<v.size(); i++) {
-
- // Compute FD approximation of second derivative of exp
- std::array<Dune::FieldMatrix<double,3,3>, 4> fdDDExp;
+ std::array<FieldVector<double,3>, 125> v;
+ int ct = 0;
+ double eps = 1e-4;
+
+ for (int i=-2; i<3; i++)
+ for (int j=-2; j<3; j++)
+ for (int k=-2; k<3; k++) {
+ v[ct][0] = i;
+ v[ct][1] = j;
+ v[ct][2] = k;
+ ct++;
+ }
- for (int j=0; j<3; j++) {
+ for (size_t i=0; i<v.size(); i++) {
- for (int k=0; k<3; k++) {
+ // Compute FD approximation of second derivative of exp
+ std::array<Dune::FieldMatrix<double,3,3>, 4> fdDDExp;
- if (j==k) {
+ for (int j=0; j<3; j++) {
- SkewMatrix<double,3> forward(v[i]);
- forward.axial()[j] += eps;
- Rotation<double,3> forwardQ = Rotation<double,3>::exp(forward);
+ for (int k=0; k<3; k++) {
- SkewMatrix<double,3> center(v[i]);
- Rotation<double,3> centerQ = Rotation<double,3>::exp(center);
+ if (j==k) {
- SkewMatrix<double,3> backward(v[i]);
- backward.axial()[j] -= eps;
- Rotation<double,3> backwardQ = Rotation<double,3>::exp(backward);
+ SkewMatrix<double,3> forward(v[i]);
+ forward.axial()[j] += eps;
+ Rotation<double,3> forwardQ = Rotation<double,3>::exp(forward);
- for (int l=0; l<4; l++)
- fdDDExp[l][j][j] = (forwardQ[l] - 2*centerQ[l] + backwardQ[l]) / (eps*eps);
+ SkewMatrix<double,3> center(v[i]);
+ Rotation<double,3> centerQ = Rotation<double,3>::exp(center);
+ SkewMatrix<double,3> backward(v[i]);
+ backward.axial()[j] -= eps;
+ Rotation<double,3> backwardQ = Rotation<double,3>::exp(backward);
- } else {
+ for (int l=0; l<4; l++)
+ fdDDExp[l][j][j] = (forwardQ[l] - 2*centerQ[l] + backwardQ[l]) / (eps*eps);
- SkewMatrix<double,3> ffV(v[i]); ffV.axial()[j] += eps; ffV.axial()[k] += eps;
- SkewMatrix<double,3> fbV(v[i]); fbV.axial()[j] += eps; fbV.axial()[k] -= eps;
- SkewMatrix<double,3> bfV(v[i]); bfV.axial()[j] -= eps; bfV.axial()[k] += eps;
- SkewMatrix<double,3> bbV(v[i]); bbV.axial()[j] -= eps; bbV.axial()[k] -= eps;
- Rotation<double,3> forwardForwardQ = Rotation<double,3>::exp(ffV);
- Rotation<double,3> forwardBackwardQ = Rotation<double,3>::exp(fbV);
- Rotation<double,3> backwardForwardQ = Rotation<double,3>::exp(bfV);
- Rotation<double,3> backwardBackwardQ = Rotation<double,3>::exp(bbV);
+ } else {
- for (int l=0; l<4; l++)
- fdDDExp[l][j][k] = (forwardForwardQ[l] + backwardBackwardQ[l]
- - forwardBackwardQ[l] - backwardForwardQ[l]) / (4*eps*eps);
+ SkewMatrix<double,3> ffV(v[i]); ffV.axial()[j] += eps; ffV.axial()[k] += eps;
+ SkewMatrix<double,3> fbV(v[i]); fbV.axial()[j] += eps; fbV.axial()[k] -= eps;
+ SkewMatrix<double,3> bfV(v[i]); bfV.axial()[j] -= eps; bfV.axial()[k] += eps;
+ SkewMatrix<double,3> bbV(v[i]); bbV.axial()[j] -= eps; bbV.axial()[k] -= eps;
- }
+ Rotation<double,3> forwardForwardQ = Rotation<double,3>::exp(ffV);
+ Rotation<double,3> forwardBackwardQ = Rotation<double,3>::exp(fbV);
+ Rotation<double,3> backwardForwardQ = Rotation<double,3>::exp(bfV);
+ Rotation<double,3> backwardBackwardQ = Rotation<double,3>::exp(bbV);
- }
+ for (int l=0; l<4; l++)
+ fdDDExp[l][j][k] = (forwardForwardQ[l] + backwardBackwardQ[l]
+ - forwardBackwardQ[l] - backwardForwardQ[l]) / (4*eps*eps);
}
- // Compute analytical second derivative of exp
- std::array<Dune::FieldMatrix<double,3,3>, 4> ddExp;
- Rotation<double,3>::DDexp(v[i], ddExp);
-
- for (int m=0; m<4; m++)
- for (int j=0; j<3; j++)
- for (int k=0; k<3; k++)
- if ( std::abs(fdDDExp[m][j][k] - ddExp[m][j][k]) > eps) {
- std::cout << "Error at v = " << v[i]
- << "[" << m << ", " << j << ", " << k << "] "
- << " fd: " << fdDDExp[m][j][k]
- << " analytical: " << ddExp[m][j][k] << std::endl;
- }
+ }
+
}
+
+ // Compute analytical second derivative of exp
+ std::array<Dune::FieldMatrix<double,3,3>, 4> ddExp;
+ Rotation<double,3>::DDexp(v[i], ddExp);
+
+ for (int m=0; m<4; m++)
+ for (int j=0; j<3; j++)
+ for (int k=0; k<3; k++)
+ if ( std::abs(fdDDExp[m][j][k] - ddExp[m][j][k]) > eps) {
+ std::cout << "Error at v = " << v[i]
+ << "[" << m << ", " << j << ", " << k << "] "
+ << " fd: " << fdDDExp[m][j][k]
+ << " analytical: " << ddExp[m][j][k] << std::endl;
+ }
+ }
}
void testRotation(Rotation<double,3> q)
{
- // Make sure it really is a unit quaternion
- q.normalize();
-
- assert(std::abs(1-q.two_norm()) < 1e-12);
+ // Make sure it really is a unit quaternion
+ q.normalize();
- // Turn it into a matrix
- FieldMatrix<double,3,3> matrix;
- q.matrix(matrix);
+ assert(std::abs(1-q.two_norm()) < 1e-12);
- // make sure it is an orthogonal matrix
- if (std::abs(1-matrix.determinant()) > 1e-12 )
- DUNE_THROW(Exception, "Expected determinant 1, but the computed value is " << matrix.determinant());
+ // Turn it into a matrix
+ FieldMatrix<double,3,3> matrix;
+ q.matrix(matrix);
- assert( std::abs( matrix[0]*matrix[1] ) < 1e-12 );
- assert( std::abs( matrix[0]*matrix[2] ) < 1e-12 );
- assert( std::abs( matrix[1]*matrix[2] ) < 1e-12 );
+ // make sure it is an orthogonal matrix
+ if (std::abs(1-matrix.determinant()) > 1e-12 )
+ DUNE_THROW(Exception, "Expected determinant 1, but the computed value is " << matrix.determinant());
- // Turn the matrix back into a quaternion, and check whether it is the same one
- // Since the quaternions form a double covering of SO(3), we may either get q back
- // or -q. We have to check both.
- Rotation<double,3> newQ;
- newQ.set(matrix);
+ assert( std::abs( matrix[0]*matrix[1] ) < 1e-12 );
+ assert( std::abs( matrix[0]*matrix[2] ) < 1e-12 );
+ assert( std::abs( matrix[1]*matrix[2] ) < 1e-12 );
- Rotation<double,3> diff = newQ;
- diff -= q;
+ // Turn the matrix back into a quaternion, and check whether it is the same one
+ // Since the quaternions form a double covering of SO(3), we may either get q back
+ // or -q. We have to check both.
+ Rotation<double,3> newQ;
+ newQ.set(matrix);
- Rotation<double,3> sum = newQ;
- sum += q;
+ Rotation<double,3> diff = newQ;
+ diff -= q;
- if (diff.infinity_norm() > 1e-12 && sum.infinity_norm() > 1e-12)
- DUNE_THROW(Exception, "Backtransformation failed for " << q << ". ");
+ Rotation<double,3> sum = newQ;
+ sum += q;
- // //////////////////////////////////////////////////////
- // Check the director vectors
- // //////////////////////////////////////////////////////
+ if (diff.infinity_norm() > 1e-12 && sum.infinity_norm() > 1e-12)
+ DUNE_THROW(Exception, "Backtransformation failed for " << q << ". ");
- for (int i=0; i<3; i++)
- for (int j=0; j<3; j++)
- assert( std::abs(matrix[i][j] - q.director(j)[i]) < 1e-12 );
+ // //////////////////////////////////////////////////////
+ // Check the director vectors
+ // //////////////////////////////////////////////////////
- // //////////////////////////////////////////////////////
- // Check multiplication with another unit quaternion
- // //////////////////////////////////////////////////////
+ for (int i=0; i<3; i++)
+ for (int j=0; j<3; j++)
+ assert( std::abs(matrix[i][j] - q.director(j)[i]) < 1e-12 );
- for (int i=-2; i<2; i++)
- for (int j=-2; j<2; j++)
- for (int k=-2; k<2; k++)
- for (int l=-2; l<2; l++)
- if (i!=0 || j!=0 || k!=0 || l!=0) {
+ // //////////////////////////////////////////////////////
+ // Check multiplication with another unit quaternion
+ // //////////////////////////////////////////////////////
- Rotation<double,3> q2(Quaternion<double>(i,j,k,l));
- q2.normalize();
+ for (int i=-2; i<2; i++)
+ for (int j=-2; j<2; j++)
+ for (int k=-2; k<2; k++)
+ for (int l=-2; l<2; l++)
+ if (i!=0 || j!=0 || k!=0 || l!=0) {
- // set up corresponding rotation matrix
- FieldMatrix<double,3,3> q2Matrix;
- q2.matrix(q2Matrix);
+ Rotation<double,3> q2(Quaternion<double>(i,j,k,l));
+ q2.normalize();
- // q2 = q2 * q Quaternion multiplication
- q2 = q2.mult(q);
+ // set up corresponding rotation matrix
+ FieldMatrix<double,3,3> q2Matrix;
+ q2.matrix(q2Matrix);
- // q2 = q2 * q Matrix multiplication
- q2Matrix.rightmultiply(matrix);
+ // q2 = q2 * q Quaternion multiplication
+ q2 = q2.mult(q);
- FieldMatrix<double,3,3> productMatrix;
- q2.matrix(productMatrix);
+ // q2 = q2 * q Matrix multiplication
+ q2Matrix.rightmultiply(matrix);
- // Make sure we got identical results
- productMatrix -= q2Matrix;
- assert(productMatrix.infinity_norm() < 1e-10);
+ FieldMatrix<double,3,3> productMatrix;
+ q2.matrix(productMatrix);
- }
+ // Make sure we got identical results
+ productMatrix -= q2Matrix;
+ assert(productMatrix.infinity_norm() < 1e-10);
- // ////////////////////////////////////////////////////////////////
- // Check the operators 'B' that create an orthonormal basis of H
- // ////////////////////////////////////////////////////////////////
+ }
- Quaternion<double> Bq[4];
- Bq[0] = q;
- Bq[1] = q.B(0);
- Bq[2] = q.B(1);
- Bq[3] = q.B(2);
+ // ////////////////////////////////////////////////////////////////
+ // Check the operators 'B' that create an orthonormal basis of H
+ // ////////////////////////////////////////////////////////////////
- for (int i=0; i<4; i++) {
+ Quaternion<double> Bq[4];
+ Bq[0] = q;
+ Bq[1] = q.B(0);
+ Bq[2] = q.B(1);
+ Bq[3] = q.B(2);
- for (int j=0; j<4; j++) {
+ for (int i=0; i<4; i++) {
- double prod = Bq[i]*Bq[j];
- assert( std::abs( prod - (i==j) ) < 1e-6 );
+ for (int j=0; j<4; j++) {
- }
+ double prod = Bq[i]*Bq[j];
+ assert( std::abs( prod - (i==j) ) < 1e-6 );
}
- //////////////////////////////////////////////////////////////////////
- // Check whether the derivativeOfMatrixToQuaternion methods works
- //////////////////////////////////////////////////////////////////////
+ }
- Tensor3<double,4,3,3> derivative = Rotation<double,3>::derivativeOfMatrixToQuaternion(matrix);
+ //////////////////////////////////////////////////////////////////////
+ // Check whether the derivativeOfMatrixToQuaternion methods works
+ //////////////////////////////////////////////////////////////////////
- const double eps = 1e-8;
- Tensor3<double,4,3,3> derivativeFD;
+ Tensor3<double,4,3,3> derivative = Rotation<double,3>::derivativeOfMatrixToQuaternion(matrix);
- for (size_t i=0; i<3; i++)
- {
- for (size_t j=0; j<3; j++)
- {
- auto forwardMatrix = matrix;
- forwardMatrix[i][j] += eps;
- auto backwardMatrix = matrix;
- backwardMatrix[i][j] -= eps;
+ const double eps = 1e-8;
+ Tensor3<double,4,3,3> derivativeFD;
- Rotation<double,3> forwardRotation, backwardRotation;
- forwardRotation.set(forwardMatrix);
- backwardRotation.set(backwardMatrix);
+ for (size_t i=0; i<3; i++)
+ {
+ for (size_t j=0; j<3; j++)
+ {
+ auto forwardMatrix = matrix;
+ forwardMatrix[i][j] += eps;
+ auto backwardMatrix = matrix;
+ backwardMatrix[i][j] -= eps;
- for (size_t k=0; k<4; k++)
- derivativeFD[k][i][j] = (forwardRotation.globalCoordinates()[k] - backwardRotation.globalCoordinates()[k]) / (2*eps);
+ Rotation<double,3> forwardRotation, backwardRotation;
+ forwardRotation.set(forwardMatrix);
+ backwardRotation.set(backwardMatrix);
- }
- }
+ for (size_t k=0; k<4; k++)
+ derivativeFD[k][i][j] = (forwardRotation.globalCoordinates()[k] - backwardRotation.globalCoordinates()[k]) / (2*eps);
- if ((derivative - derivativeFD).infinity_norm() > 1e-6)
- {
- std::cout << "At matrix:\n" << matrix << std::endl;
-
- std::cout << "Derivative of matrix to quaternion map does not match its FD approximation" << std::endl;
- std::cout << "Analytical derivative:" << std::endl;
- std::cout << derivative << std::endl;
- std::cout << "Finite difference approximation" << std::endl;
- std::cout << derivativeFD << std::endl;
- abort();
}
+ }
+
+ if ((derivative - derivativeFD).infinity_norm() > 1e-6)
+ {
+ std::cout << "At matrix:\n" << matrix << std::endl;
+
+ std::cout << "Derivative of matrix to quaternion map does not match its FD approximation" << std::endl;
+ std::cout << "Analytical derivative:" << std::endl;
+ std::cout << derivative << std::endl;
+ std::cout << "Finite difference approximation" << std::endl;
+ std::cout << derivativeFD << std::endl;
+ abort();
+ }
}
//! test interpolation between two rotations
bool testInterpolation(const Rotation<double, 3>& a, const Rotation<double, 3>& b) {
- // Compute difference on T_a SO(3)
- Rotation<double, 3> newB = Rotation<double, 3>::interpolate(a, b, 1.0);
+ // Compute difference on T_a SO(3)
+ Rotation<double, 3> newB = Rotation<double, 3>::interpolate(a, b, 1.0);
- // Compare matrix representation
- FieldMatrix<double, 3, 3> matB;
- b.matrix(matB);
+ // Compare matrix representation
+ FieldMatrix<double, 3, 3> matB;
+ b.matrix(matB);
- FieldMatrix<double, 3, 3> matNewB;
- newB.matrix(matNewB);
+ FieldMatrix<double, 3, 3> matNewB;
+ newB.matrix(matNewB);
- matNewB -= matB;
- if (matNewB.infinity_norm() > 1e-14)
- std::cout << " Interpolation failed with difference " << matNewB.infinity_norm() << std::endl;
+ matNewB -= matB;
+ if (matNewB.infinity_norm() > 1e-14)
+ std::cout << " Interpolation failed with difference " << matNewB.infinity_norm() << std::endl;
- return (matNewB.infinity_norm() < 1e-14);
+ return (matNewB.infinity_norm() < 1e-14);
}
int main (int argc, char *argv[]) try
{
- std::vector<Rotation<double,3> > testPoints;
- ValueFactory<Rotation<double,3> >::get(testPoints);
+ std::vector<Rotation<double,3> > testPoints;
+ ValueFactory<Rotation<double,3> >::get(testPoints);
- int nTestPoints = testPoints.size();
+ int nTestPoints = testPoints.size();
- // Test each element in the list
- for (int i=0; i<nTestPoints; i++)
- testRotation(testPoints[i]);
+ // Test each element in the list
+ for (int i=0; i<nTestPoints; i++)
+ testRotation(testPoints[i]);
- bool passed(true);
- // Test interpolating between pairs of rotations
- for (int i=0; i<nTestPoints-1; i++)
- passed = passed and testInterpolation(testPoints[i], testPoints[i+1]);
+ bool passed(true);
+ // Test interpolating between pairs of rotations
+ for (int i=0; i<nTestPoints-1; i++)
+ passed = passed and testInterpolation(testPoints[i], testPoints[i+1]);
- // //////////////////////////////////////////////
- // Test second derivative of exp
- // //////////////////////////////////////////////
- testDDExp();
+ // //////////////////////////////////////////////
+ // Test second derivative of exp
+ // //////////////////////////////////////////////
+ testDDExp();
- return not passed;
+ return not passed;
- } catch (Exception& e) {
+}
+catch (Exception& e) {
- std::cout << e.what() << std::endl;
+ std::cout << e.what() << std::endl;
- }
+}
diff --git a/test/surfacecosseratstressassemblertest.cc b/test/surfacecosseratstressassemblertest.cc
index e3752141..b50f2fb9 100644
--- a/test/surfacecosseratstressassemblertest.cc
+++ b/test/surfacecosseratstressassemblertest.cc
@@ -46,14 +46,14 @@ using ValueType = adouble;
// Surface Shell Boundary
std::function<bool(FieldVector<double,dim>)> isSurfaceShellBoundary = [](FieldVector<double,dim> coordinate) {
- return coordinate[2] > 199.99 and coordinate[0] > 49.99 and coordinate[0] < 150.01;
-};
+ return coordinate[2] > 199.99 and coordinate[0] > 49.99 and coordinate[0] < 150.01;
+ };
static bool sameEntries(FieldVector<double,3> a,FieldVector<double,3> b) {
b[1] *= -1;
b -= a;
//If a.two_norm > 0, so if there is a displacement at this points: Scale the difference with the length of the vectors
- return a.two_norm() > 0 ? b.two_norm()/a.two_norm() < 0.05 : b.two_norm() < 0.05;
+ return a.two_norm() > 0 ? b.two_norm()/a.two_norm() < 0.05 : b.two_norm() < 0.05;
}
static bool sameEntries(FieldVector<double,4> a,FieldVector<double,4> b) {
@@ -66,7 +66,7 @@ static bool sameEntries(FieldVector<double,4> a,FieldVector<double,4> b) {
}
template <int d>
-static bool symmetryTest(std::unordered_map<std::string, FieldVector<double,d>> map, double axis) {
+static bool symmetryTest(std::unordered_map<std::string, FieldVector<double,d> > map, double axis) {
bool isSame = true;
std::string entry;
for (auto it = map.begin(); it != map.end(); it++) {
@@ -103,12 +103,12 @@ int main (int argc, char *argv[])
grid->setRefinementType(GridType::RefinementType::COPY);
int numLevels = 4;
-
+
while (numLevels > 0) {
- for (auto&& e : elements(grid->leafGridView())){
+ for (auto&& e : elements(grid->leafGridView())) {
bool isSurfaceShell = false;
for (int i = 0; i < e.geometry().corners(); i++) {
- isSurfaceShell = isSurfaceShell || isSurfaceShellBoundary(e.geometry().corner(i));
+ isSurfaceShell = isSurfaceShell || isSurfaceShellBoundary(e.geometry().corner(i));
}
grid->mark(isSurfaceShell ? 1 : 0,e);
}
@@ -134,9 +134,9 @@ int main (int argc, char *argv[])
BoundaryPatch<GridView> surfaceShellBoundary(gridView, surfaceShellVertices);
std::function<Dune::FieldVector<double,2>(Dune::FieldVector<double,dim>)> fLame = [](Dune::FieldVector<double,dim> x){
- Dune::FieldVector<double,2> lameConstants {1.24E+07,2.52E+07}; //stiffness = 33
- return lameConstants;
- };
+ Dune::FieldVector<double,2> lameConstants {1.24E+07,2.52E+07}; //stiffness = 33
+ return lameConstants;
+ };
/////////////////////////////////////////////////////////////
// FUNCTION SPACE
@@ -146,14 +146,14 @@ int main (int argc, char *argv[])
auto basisOrderD = makeBasis(
gridView,
power<dim>(
- lagrange<displacementOrder>()
- ));
+ lagrange<displacementOrder>()
+ ));
auto basisOrderR = makeBasis(
gridView,
power<dim>(
- lagrange<rotationOrder>()
- ));
+ lagrange<rotationOrder>()
+ ));
/////////////////////////////////////////////////////////////
// READ IN TEST DATA
@@ -182,9 +182,13 @@ int main (int argc, char *argv[])
xInitial.resize(basisOrderD.size());
DisplacementVector displacement;
displacement.resize(basisOrderD.size());
-
- Functions::interpolate(basisOrderD, x, [](FieldVector<double,dim> x){ return x; });
- Functions::interpolate(basisOrderD, xInitial, [](FieldVector<double,dim> x){ return x; });
+
+ Functions::interpolate(basisOrderD, x, [](FieldVector<double,dim> x){
+ return x;
+ });
+ Functions::interpolate(basisOrderD, xInitial, [](FieldVector<double,dim> x){
+ return x;
+ });
for (std::size_t i = 0; i < basisOrderD.size(); i++) {
std::stringstream stream;
@@ -195,12 +199,14 @@ int main (int argc, char *argv[])
xInitial[i] += initialDeformationMap.at(stream.str());
}
- using RotationVector = std::vector<Rotation<double,dim>>;
+ using RotationVector = std::vector<Rotation<double,dim> >;
RotationVector rot;
rot.resize(basisOrderR.size());
DisplacementVector xOrderR;
xOrderR.resize(basisOrderR.size());
- Functions::interpolate(basisOrderR, xOrderR, [](FieldVector<double,dim> x){ return x; });
+ Functions::interpolate(basisOrderR, xOrderR, [](FieldVector<double,dim> x){
+ return x;
+ });
for (std::size_t i = 0; i < basisOrderR.size(); i++) {
std::stringstream stream;
stream << xOrderR[i];
@@ -227,20 +233,20 @@ int main (int argc, char *argv[])
/////////////////////////////////////////////////////////////
auto quadOrder = 4;
- auto stressAssembler = GFE::SurfaceCosseratStressAssembler<decltype(basisOrderD),decltype(basisOrderR), FieldVector<double,dim>, Rotation<double,dim>>
- (basisOrderD, basisOrderR);
+ auto stressAssembler = GFE::SurfaceCosseratStressAssembler<decltype(basisOrderD),decltype(basisOrderR), FieldVector<double,dim>, Rotation<double,dim> >
+ (basisOrderD, basisOrderR);
- std::shared_ptr<Elasticity::LocalDensity<dim,ValueType>> elasticDensity;
+ std::shared_ptr<Elasticity::LocalDensity<dim,ValueType> > elasticDensity;
ParameterTree materialParameters;
materialParameters["mu"] = "2.7191e+4";
materialParameters["lambda"] = "4.4364e+4";
- elasticDensity = std::make_shared<Elasticity::StVenantKirchhoffDensity<dim,ValueType>>(materialParameters);
+ elasticDensity = std::make_shared<Elasticity::StVenantKirchhoffDensity<dim,ValueType> >(materialParameters);
- std::vector<FieldMatrix<double,dim,dim>> stressSubstrate1stPiolaKirchhoffTensor;
- std::vector<FieldMatrix<double,dim,dim>> stressSubstrateCauchyTensor;
- stressAssembler.assembleSubstrateStress<Elasticity::LocalDensity<dim,ValueType>>(x, elasticDensity.get(), quadOrder, stressSubstrate1stPiolaKirchhoffTensor, stressSubstrateCauchyTensor);
- std::vector<FieldMatrix<double,dim,dim>> stressShellBiotTensor;
- stressAssembler.assembleShellStress(rot, x, xInitial, fLame,/*mu_c*/0, surfaceShellBoundary, quadOrder, stressShellBiotTensor);
+ std::vector<FieldMatrix<double,dim,dim> > stressSubstrate1stPiolaKirchhoffTensor;
+ std::vector<FieldMatrix<double,dim,dim> > stressSubstrateCauchyTensor;
+ stressAssembler.assembleSubstrateStress<Elasticity::LocalDensity<dim,ValueType> >(x, elasticDensity.get(), quadOrder, stressSubstrate1stPiolaKirchhoffTensor, stressSubstrateCauchyTensor);
+ std::vector<FieldMatrix<double,dim,dim> > stressShellBiotTensor;
+ stressAssembler.assembleShellStress(rot, x, xInitial, fLame,/*mu_c*/ 0, surfaceShellBoundary, quadOrder, stressShellBiotTensor);
//Now modify ONE value in the rotation function
int i = 39787;
@@ -249,13 +255,13 @@ int main (int argc, char *argv[])
rot[i].matrix(rotationMatrix);
Dune::MatrixVector::transpose(transposed, rotationMatrix);
rot[i].set(transposed);
- std::vector<FieldMatrix<double,dim,dim>> stressShellBiotTensorNotSymmetric;
- stressAssembler.assembleShellStress(rot, x, xInitial, fLame,/*mu_c*/0, surfaceShellBoundary, quadOrder, stressShellBiotTensorNotSymmetric);
+ std::vector<FieldMatrix<double,dim,dim> > stressShellBiotTensorNotSymmetric;
+ stressAssembler.assembleShellStress(rot, x, xInitial, fLame,/*mu_c*/ 0, surfaceShellBoundary, quadOrder, stressShellBiotTensorNotSymmetric);
// ... and ONE in the displacement function
x[i] *= 2;
- std::vector<FieldMatrix<double,dim,dim>> stressSubstrate1stPiolaKirchhoffTensorNotSymmetric;
- std::vector<FieldMatrix<double,dim,dim>> stressSubstrateCauchyTensorNotSymmetric;
- stressAssembler.assembleSubstrateStress<Elasticity::LocalDensity<dim,ValueType>>(x, elasticDensity.get(), quadOrder, stressSubstrate1stPiolaKirchhoffTensorNotSymmetric, stressSubstrateCauchyTensorNotSymmetric);
+ std::vector<FieldMatrix<double,dim,dim> > stressSubstrate1stPiolaKirchhoffTensorNotSymmetric;
+ std::vector<FieldMatrix<double,dim,dim> > stressSubstrateCauchyTensorNotSymmetric;
+ stressAssembler.assembleSubstrateStress<Elasticity::LocalDensity<dim,ValueType> >(x, elasticDensity.get(), quadOrder, stressSubstrate1stPiolaKirchhoffTensorNotSymmetric, stressSubstrateCauchyTensorNotSymmetric);
// ... and make sure that the stress is not symmetric anymore!
bool substrateModifiedIsNotSymmetric = false;
bool shellModifiedIsNotSymmetric = false;
@@ -283,7 +289,7 @@ int main (int argc, char *argv[])
auto shell = stressShellBiotTensor[thisIndex];
auto mirroredShell = stressShellBiotTensor[mirroredIndex];
- if ((shell.frobenius_norm()-mirroredShell.frobenius_norm())/mirroredShell.frobenius_norm() > 0.05){
+ if ((shell.frobenius_norm()-mirroredShell.frobenius_norm())/mirroredShell.frobenius_norm() > 0.05) {
std::cerr << "The elements with center " << element.geometry().center()
<< " and " << elementCenter << " have different Biot stress values (assembled using order 3): " << std::endl
<< shell << " and " << mirroredShell << ", but should have the same!" << std::endl;
diff --git a/test/svdtest.cc b/test/svdtest.cc
index 7f53915c..e795674a 100644
--- a/test/svdtest.cc
+++ b/test/svdtest.cc
@@ -8,50 +8,50 @@ using namespace Dune;
int main()
{
- const int N=3;
- const int M=3;
-
- FieldMatrix<double,N,M> testMatrix;
-
- int nTestValues = 5;
- double maxDiff = 0;
-
- MultiIndex index(N*M, nTestValues);
- int numIndices = index.cycle();
-
- for (int i=0; i<numIndices; i++, ++index) {
-
- for (int j=0; j<N; j++)
- for (int k=0; k<M; k++) {
- testMatrix[j][k] = std::exp(double(2*index[j*M+k]-double(nTestValues))) - std::exp(double(nTestValues));
- //std::cout << std::exp(2*index[j*M+k]-double(nTestValues)) << std::endl;
- }
- //std::cout << "testMatrix:\n" << testMatrix << std::endl;
- //exit(0);
- FieldVector<double,N> w;
- FieldMatrix<double,N,N> v;
-
- FieldMatrix<double,N,M> testMatrixBackup = testMatrix;
- svdcmp(testMatrix,w,v);
-
- // Multiply the three matrices to see whether we get the original one back
- FieldMatrix<double,N,M> product(0);
-
- for (int j=0; j<N; j++)
- for (int k=0; k<M; k++)
- for (int l=0; l<N; l++)
- product[j][k] += testMatrix[j][l] * w[l] * v[k][l];
-
- product -= testMatrixBackup;
- //std::cout << product << std::endl;
- if (maxDiff < product.infinity_norm()) {
- maxDiff = product.infinity_norm();
- std::cout << "max diff: " << maxDiff << std::endl;
- std::cout << "testMatrix:\n" << testMatrixBackup << std::endl;
- std::cout << "difference:\n" << product << std::endl;
- exit(0);
- }
-
+ const int N=3;
+ const int M=3;
+
+ FieldMatrix<double,N,M> testMatrix;
+
+ int nTestValues = 5;
+ double maxDiff = 0;
+
+ MultiIndex index(N*M, nTestValues);
+ int numIndices = index.cycle();
+
+ for (int i=0; i<numIndices; i++, ++index) {
+
+ for (int j=0; j<N; j++)
+ for (int k=0; k<M; k++) {
+ testMatrix[j][k] = std::exp(double(2*index[j*M+k]-double(nTestValues))) - std::exp(double(nTestValues));
+ //std::cout << std::exp(2*index[j*M+k]-double(nTestValues)) << std::endl;
+ }
+ //std::cout << "testMatrix:\n" << testMatrix << std::endl;
+ //exit(0);
+ FieldVector<double,N> w;
+ FieldMatrix<double,N,N> v;
+
+ FieldMatrix<double,N,M> testMatrixBackup = testMatrix;
+ svdcmp(testMatrix,w,v);
+
+ // Multiply the three matrices to see whether we get the original one back
+ FieldMatrix<double,N,M> product(0);
+
+ for (int j=0; j<N; j++)
+ for (int k=0; k<M; k++)
+ for (int l=0; l<N; l++)
+ product[j][k] += testMatrix[j][l] * w[l] * v[k][l];
+
+ product -= testMatrixBackup;
+ //std::cout << product << std::endl;
+ if (maxDiff < product.infinity_norm()) {
+ maxDiff = product.infinity_norm();
+ std::cout << "max diff: " << maxDiff << std::endl;
+ std::cout << "testMatrix:\n" << testMatrixBackup << std::endl;
+ std::cout << "difference:\n" << product << std::endl;
+ exit(0);
}
-
-}
\ No newline at end of file
+
+ }
+
+}
diff --git a/test/targetspacetest.cc b/test/targetspacetest.cc
index 81819cc3..5c2d855c 100644
--- a/test/targetspacetest.cc
+++ b/test/targetspacetest.cc
@@ -13,17 +13,17 @@ using namespace Dune;
/** \file
\brief Unit tests for classes that implement value manifolds for geodesic FE functions
-*/
+ */
/** \brief Computes the diameter of a set */
template <class TargetSpace>
double diameter(const std::vector<TargetSpace>& v)
{
- double d = 0;
- for (size_t i=0; i<v.size(); i++)
- for (size_t j=0; j<v.size(); j++)
- d = std::max(d, TargetSpace::distance(v[i],v[j]));
- return d;
+ double d = 0;
+ for (size_t i=0; i<v.size(); i++)
+ for (size_t j=0; j<v.size(); j++)
+ d = std::max(d, TargetSpace::distance(v[i],v[j]));
+ return d;
}
const double eps = 1e-4;
@@ -31,23 +31,23 @@ const double eps = 1e-4;
template <class TargetSpace>
void testExpLog(const TargetSpace& a, const TargetSpace& b)
{
- // Check whether exp and log are mutually inverse
- typename TargetSpace::EmbeddedTangentVector logarithm = TargetSpace::log(a,b);
- TargetSpace exponential = TargetSpace::exp(a, logarithm);
-
- if (TargetSpace::distance(b, exponential) > eps)
- {
- std::cout << className(a) << ": Exp and log are not mutually inverse." << std::endl;
- std::cout << "exp(a,log(a,b)): " << exponential << std::endl;
- std::cout << "b : " << b << std::endl;
- assert(false);
- }
+ // Check whether exp and log are mutually inverse
+ typename TargetSpace::EmbeddedTangentVector logarithm = TargetSpace::log(a,b);
+ TargetSpace exponential = TargetSpace::exp(a, logarithm);
+
+ if (TargetSpace::distance(b, exponential) > eps)
+ {
+ std::cout << className(a) << ": Exp and log are not mutually inverse." << std::endl;
+ std::cout << "exp(a,log(a,b)): " << exponential << std::endl;
+ std::cout << "b : " << b << std::endl;
+ assert(false);
+ }
}
template <class TargetSpace>
double distanceSquared(const TargetSpace& a, const TargetSpace& b)
{
- return Dune::power(TargetSpace::distance(a,b), 2);
+ return Dune::power(TargetSpace::distance(a,b), 2);
}
// Squared distance between two points slightly off the manifold.
@@ -55,169 +55,169 @@ double distanceSquared(const TargetSpace& a, const TargetSpace& b)
template <class TargetSpace, int dim>
double distanceSquared(const FieldVector<double,dim>& a, const FieldVector<double,dim>& b)
{
- return Dune::power(TargetSpace::distance(TargetSpace(a),TargetSpace(b)), 2);
+ return Dune::power(TargetSpace::distance(TargetSpace(a),TargetSpace(b)), 2);
}
/** \brief Compute the Riemannian Hessian of the squared distance function in global coordinates
The formula for the Riemannian Hessian has been taken from Absil, Mahony, Sepulchre:
'Optimization algorithms on matrix manifolds', page 107
-*/
+ */
template <class TargetSpace, int worldDim>
FieldMatrix<double,worldDim,worldDim> getSecondDerivativeOfSecondArgumentFD(const TargetSpace& a, const TargetSpace& b)
{
-
- const size_t spaceDim = TargetSpace::dim;
-
- // finite-difference approximation
- FieldMatrix<double,spaceDim,spaceDim> d2d2_fd(0);
-
- FieldMatrix<double,spaceDim,worldDim> B = b.orthonormalFrame();
-
- for (size_t i=0; i<spaceDim; i++) {
- for (size_t j=0; j<spaceDim; j++) {
-
- FieldVector<double,worldDim> epsXi = eps * B[i];
- FieldVector<double,worldDim> epsEta = eps * B[j];
-
- FieldVector<double,worldDim> minusEpsXi = -1 * epsXi;
- FieldVector<double,worldDim> minusEpsEta = -1 * epsEta;
-
- double forwardValue = distanceSquared(a,TargetSpace::exp(b,epsXi+epsEta)) - distanceSquared(a, TargetSpace::exp(b,epsXi)) - distanceSquared(a,TargetSpace::exp(b,epsEta));
- double centerValue = distanceSquared(a,b) - distanceSquared(a,b) - distanceSquared(a,b);
- double backwardValue = distanceSquared(a,TargetSpace::exp(b,minusEpsXi + minusEpsEta)) - distanceSquared(a, TargetSpace::exp(b,minusEpsXi)) - distanceSquared(a,TargetSpace::exp(b,minusEpsEta));
-
- d2d2_fd[i][j] = 0.5 * (forwardValue - 2*centerValue + backwardValue) / (eps*eps);
-
- }
+
+ const size_t spaceDim = TargetSpace::dim;
+
+ // finite-difference approximation
+ FieldMatrix<double,spaceDim,spaceDim> d2d2_fd(0);
+
+ FieldMatrix<double,spaceDim,worldDim> B = b.orthonormalFrame();
+
+ for (size_t i=0; i<spaceDim; i++) {
+ for (size_t j=0; j<spaceDim; j++) {
+
+ FieldVector<double,worldDim> epsXi = eps * B[i];
+ FieldVector<double,worldDim> epsEta = eps * B[j];
+
+ FieldVector<double,worldDim> minusEpsXi = -1 * epsXi;
+ FieldVector<double,worldDim> minusEpsEta = -1 * epsEta;
+
+ double forwardValue = distanceSquared(a,TargetSpace::exp(b,epsXi+epsEta)) - distanceSquared(a, TargetSpace::exp(b,epsXi)) - distanceSquared(a,TargetSpace::exp(b,epsEta));
+ double centerValue = distanceSquared(a,b) - distanceSquared(a,b) - distanceSquared(a,b);
+ double backwardValue = distanceSquared(a,TargetSpace::exp(b,minusEpsXi + minusEpsEta)) - distanceSquared(a, TargetSpace::exp(b,minusEpsXi)) - distanceSquared(a,TargetSpace::exp(b,minusEpsEta));
+
+ d2d2_fd[i][j] = 0.5 * (forwardValue - 2*centerValue + backwardValue) / (eps*eps);
+
}
-
- //B.invert();
- FieldMatrix<double,worldDim,spaceDim> BT;
- for (int i=0; i<worldDim; i++)
- for (size_t j=0; j<spaceDim; j++)
- BT[i][j] = B[j][i];
-
-
- FieldMatrix<double,spaceDim,worldDim> ret1;
- FMatrixHelp::multMatrix(d2d2_fd,B,ret1);
-
- FieldMatrix<double,worldDim,worldDim> ret2;
- FMatrixHelp::multMatrix(BT,ret1,ret2);
- return ret2;
+ }
+
+ //B.invert();
+ FieldMatrix<double,worldDim,spaceDim> BT;
+ for (int i=0; i<worldDim; i++)
+ for (size_t j=0; j<spaceDim; j++)
+ BT[i][j] = B[j][i];
+
+
+ FieldMatrix<double,spaceDim,worldDim> ret1;
+ FMatrixHelp::multMatrix(d2d2_fd,B,ret1);
+
+ FieldMatrix<double,worldDim,worldDim> ret2;
+ FMatrixHelp::multMatrix(BT,ret1,ret2);
+ return ret2;
}
template <class TargetSpace>
void testOrthonormalFrame(const TargetSpace& a)
{
- const size_t spaceDim = TargetSpace::dim;
- const size_t embeddedDim = TargetSpace::embeddedDim;
-
- FieldMatrix<double,spaceDim,embeddedDim> B = a.orthonormalFrame();
-
- for (size_t i=0; i<spaceDim; i++)
- for (size_t j=0; j<spaceDim; j++)
- assert( std::fabs(a.metric(B[i],B[j]) - (i==j)) < 1e-10 );
+ const size_t spaceDim = TargetSpace::dim;
+ const size_t embeddedDim = TargetSpace::embeddedDim;
+
+ FieldMatrix<double,spaceDim,embeddedDim> B = a.orthonormalFrame();
+
+ for (size_t i=0; i<spaceDim; i++)
+ for (size_t j=0; j<spaceDim; j++)
+ assert( std::fabs(a.metric(B[i],B[j]) - (i==j)) < 1e-10 );
}
template <class TargetSpace>
void testDerivativeOfDistanceSquared(const TargetSpace& a, const TargetSpace& b)
{
- static const size_t embeddedDim = TargetSpace::embeddedDim;
-
- ///////////////////////////////////////////////////////////////////
- // Test derivative with respect to second argument
- ///////////////////////////////////////////////////////////////////
- typename TargetSpace::EmbeddedTangentVector d2 = TargetSpace::derivativeOfDistanceSquaredWRTSecondArgument(a, b);
-
- // finite-difference approximation
- Dune::FieldMatrix<double,TargetSpace::TangentVector::dimension,embeddedDim> B = b.orthonormalFrame();
-
- typename TargetSpace::TangentVector d2_fd;
- for (size_t i=0; i<TargetSpace::TangentVector::dimension; i++) {
-
- typename TargetSpace::EmbeddedTangentVector fwVariation = eps * B[i];
- typename TargetSpace::EmbeddedTangentVector bwVariation = -eps * B[i];
- TargetSpace bPlus = TargetSpace::exp(b,fwVariation);
- TargetSpace bMinus = TargetSpace::exp(b,bwVariation);
-
- d2_fd[i] = (distanceSquared(a,bPlus) - distanceSquared(a,bMinus)) / (2*eps);
- }
+ static const size_t embeddedDim = TargetSpace::embeddedDim;
- // transform into embedded coordinates
- typename TargetSpace::EmbeddedTangentVector d2_fd_embedded;
- B.mtv(d2_fd,d2_fd_embedded);
+ ///////////////////////////////////////////////////////////////////
+ // Test derivative with respect to second argument
+ ///////////////////////////////////////////////////////////////////
+ typename TargetSpace::EmbeddedTangentVector d2 = TargetSpace::derivativeOfDistanceSquaredWRTSecondArgument(a, b);
+
+ // finite-difference approximation
+ Dune::FieldMatrix<double,TargetSpace::TangentVector::dimension,embeddedDim> B = b.orthonormalFrame();
+
+ typename TargetSpace::TangentVector d2_fd;
+ for (size_t i=0; i<TargetSpace::TangentVector::dimension; i++) {
+
+ typename TargetSpace::EmbeddedTangentVector fwVariation = eps * B[i];
+ typename TargetSpace::EmbeddedTangentVector bwVariation = -eps * B[i];
+ TargetSpace bPlus = TargetSpace::exp(b,fwVariation);
+ TargetSpace bMinus = TargetSpace::exp(b,bwVariation);
+
+ d2_fd[i] = (distanceSquared(a,bPlus) - distanceSquared(a,bMinus)) / (2*eps);
+ }
+
+ // transform into embedded coordinates
+ typename TargetSpace::EmbeddedTangentVector d2_fd_embedded;
+ B.mtv(d2_fd,d2_fd_embedded);
+
+ if ( (d2 - d2_fd_embedded).infinity_norm() > 200*eps ) {
+ std::cout << className(a) << ": Analytical gradient does not match fd approximation." << std::endl;
+ std::cout << "d2 Analytical: " << d2 << std::endl;
+ std::cout << "d2 FD : " << d2_fd << std::endl;
+ assert(false);
+ }
- if ( (d2 - d2_fd_embedded).infinity_norm() > 200*eps ) {
- std::cout << className(a) << ": Analytical gradient does not match fd approximation." << std::endl;
- std::cout << "d2 Analytical: " << d2 << std::endl;
- std::cout << "d2 FD : " << d2_fd << std::endl;
- assert(false);
- }
-
}
template <class TargetSpace>
void testHessianOfDistanceSquared(const TargetSpace& a, const TargetSpace& b)
{
- static const int embeddedDim = TargetSpace::embeddedDim;
-
- ///////////////////////////////////////////////////////////////////
- // Test second derivative with respect to second argument
- ///////////////////////////////////////////////////////////////////
- FieldMatrix<double,embeddedDim,embeddedDim> d2d2 = (TargetSpace::secondDerivativeOfDistanceSquaredWRTSecondArgument(a, b)).matrix();
-
- // finite-difference approximation
- FieldMatrix<double,embeddedDim,embeddedDim> d2d2_fd = getSecondDerivativeOfSecondArgumentFD<TargetSpace,embeddedDim>(a,b);
-
- if ( (d2d2 - d2d2_fd).infinity_norm() > 200*eps) {
- std::cout << className(a) << ": Analytical second derivative does not match fd approximation." << std::endl;
- std::cout << "d2d2 Analytical:" << std::endl << d2d2 << std::endl;
- std::cout << "d2d2 FD :" << std::endl << d2d2_fd << std::endl;
- assert(false);
- }
-
+ static const int embeddedDim = TargetSpace::embeddedDim;
+
+ ///////////////////////////////////////////////////////////////////
+ // Test second derivative with respect to second argument
+ ///////////////////////////////////////////////////////////////////
+ FieldMatrix<double,embeddedDim,embeddedDim> d2d2 = (TargetSpace::secondDerivativeOfDistanceSquaredWRTSecondArgument(a, b)).matrix();
+
+ // finite-difference approximation
+ FieldMatrix<double,embeddedDim,embeddedDim> d2d2_fd = getSecondDerivativeOfSecondArgumentFD<TargetSpace,embeddedDim>(a,b);
+
+ if ( (d2d2 - d2d2_fd).infinity_norm() > 200*eps) {
+ std::cout << className(a) << ": Analytical second derivative does not match fd approximation." << std::endl;
+ std::cout << "d2d2 Analytical:" << std::endl << d2d2 << std::endl;
+ std::cout << "d2d2 FD :" << std::endl << d2d2_fd << std::endl;
+ assert(false);
+ }
+
}
template <class TargetSpace>
void testMixedDerivativesOfDistanceSquared(const TargetSpace& a, const TargetSpace& b)
{
- static const size_t embeddedDim = TargetSpace::embeddedDim;
-
- //////////////////////////////////////////////////////////////////////////////
- // Test mixed second derivative with respect to first and second argument
- //////////////////////////////////////////////////////////////////////////////
-
- FieldMatrix<double,embeddedDim,embeddedDim> d1d2 = TargetSpace::secondDerivativeOfDistanceSquaredWRTFirstAndSecondArgument(a, b);
-
- // finite-difference approximation
- FieldMatrix<double,embeddedDim,embeddedDim> d1d2_fd;
-
- for (size_t i=0; i<embeddedDim; i++) {
- for (size_t j=0; j<embeddedDim; j++) {
-
- FieldVector<double,embeddedDim> aPlus = a.globalCoordinates();
- FieldVector<double,embeddedDim> aMinus = a.globalCoordinates();
- aPlus[i] += eps;
- aMinus[i] -= eps;
-
- FieldVector<double,embeddedDim> bPlus = b.globalCoordinates();
- FieldVector<double,embeddedDim> bMinus = b.globalCoordinates();
- bPlus[j] += eps;
- bMinus[j] -= eps;
-
- d1d2_fd[i][j] = (distanceSquared<TargetSpace>(aPlus,bPlus) + distanceSquared<TargetSpace>(aMinus,bMinus)
- - distanceSquared<TargetSpace>(aPlus,bMinus) - distanceSquared<TargetSpace>(aMinus,bPlus)) / (4*eps*eps);
-
- }
- }
-
- if ( (d1d2 - d1d2_fd).infinity_norm() > 200*eps ) {
- std::cout << className(a) << ": Analytical mixed second derivative does not match fd approximation." << std::endl;
- std::cout << "d1d2 Analytical:" << std::endl << d1d2 << std::endl;
- std::cout << "d1d2 FD :" << std::endl << d1d2_fd << std::endl;
- assert(false);
+ static const size_t embeddedDim = TargetSpace::embeddedDim;
+
+ //////////////////////////////////////////////////////////////////////////////
+ // Test mixed second derivative with respect to first and second argument
+ //////////////////////////////////////////////////////////////////////////////
+
+ FieldMatrix<double,embeddedDim,embeddedDim> d1d2 = TargetSpace::secondDerivativeOfDistanceSquaredWRTFirstAndSecondArgument(a, b);
+
+ // finite-difference approximation
+ FieldMatrix<double,embeddedDim,embeddedDim> d1d2_fd;
+
+ for (size_t i=0; i<embeddedDim; i++) {
+ for (size_t j=0; j<embeddedDim; j++) {
+
+ FieldVector<double,embeddedDim> aPlus = a.globalCoordinates();
+ FieldVector<double,embeddedDim> aMinus = a.globalCoordinates();
+ aPlus[i] += eps;
+ aMinus[i] -= eps;
+
+ FieldVector<double,embeddedDim> bPlus = b.globalCoordinates();
+ FieldVector<double,embeddedDim> bMinus = b.globalCoordinates();
+ bPlus[j] += eps;
+ bMinus[j] -= eps;
+
+ d1d2_fd[i][j] = (distanceSquared<TargetSpace>(aPlus,bPlus) + distanceSquared<TargetSpace>(aMinus,bMinus)
+ - distanceSquared<TargetSpace>(aPlus,bMinus) - distanceSquared<TargetSpace>(aMinus,bPlus)) / (4*eps*eps);
+
}
+ }
+
+ if ( (d1d2 - d1d2_fd).infinity_norm() > 200*eps ) {
+ std::cout << className(a) << ": Analytical mixed second derivative does not match fd approximation." << std::endl;
+ std::cout << "d1d2 Analytical:" << std::endl << d1d2 << std::endl;
+ std::cout << "d1d2 FD :" << std::endl << d1d2_fd << std::endl;
+ assert(false);
+ }
}
@@ -225,38 +225,38 @@ void testMixedDerivativesOfDistanceSquared(const TargetSpace& a, const TargetSpa
template <class TargetSpace>
void testDerivativeOfHessianOfDistanceSquared(const TargetSpace& a, const TargetSpace& b)
{
- static const size_t embeddedDim = TargetSpace::embeddedDim;
-
- /////////////////////////////////////////////////////////////////////////////////////////////
- // Test mixed third derivative with respect to first (once) and second (twice) argument
- /////////////////////////////////////////////////////////////////////////////////////////////
-
- Tensor3<double,embeddedDim,embeddedDim,embeddedDim> d2d2d2 = TargetSpace::thirdDerivativeOfDistanceSquaredWRTSecondArgument(a, b);
-
- Tensor3<double,embeddedDim,embeddedDim,embeddedDim> d2d2d2_fd;
-
- for (size_t i=0; i<embeddedDim; i++) {
-
- FieldVector<double,embeddedDim> bPlus = b.globalCoordinates();
- FieldVector<double,embeddedDim> bMinus = b.globalCoordinates();
- bPlus[i] += eps;
- bMinus[i] -= eps;
-
- FieldMatrix<double,embeddedDim,embeddedDim> hPlus = getSecondDerivativeOfSecondArgumentFD<TargetSpace,embeddedDim>(a,TargetSpace(bPlus));
- FieldMatrix<double,embeddedDim,embeddedDim> hMinus = getSecondDerivativeOfSecondArgumentFD<TargetSpace,embeddedDim>(a,TargetSpace(bMinus));
-
- d2d2d2_fd[i] = hPlus;
- d2d2d2_fd[i] -= hMinus;
- d2d2d2_fd[i] /= 2*eps;
-
- }
+ static const size_t embeddedDim = TargetSpace::embeddedDim;
- if ( (d2d2d2 - d2d2d2_fd).infinity_norm() > 200*eps) {
- std::cout << className(a) << ": Analytical third derivative does not match fd approximation." << std::endl;
- std::cout << "d2d2d2 Analytical:" << std::endl << d2d2d2 << std::endl;
- std::cout << "d2d2d2 FD :" << std::endl << d2d2d2_fd << std::endl;
- assert(false);
- }
+ /////////////////////////////////////////////////////////////////////////////////////////////
+ // Test mixed third derivative with respect to first (once) and second (twice) argument
+ /////////////////////////////////////////////////////////////////////////////////////////////
+
+ Tensor3<double,embeddedDim,embeddedDim,embeddedDim> d2d2d2 = TargetSpace::thirdDerivativeOfDistanceSquaredWRTSecondArgument(a, b);
+
+ Tensor3<double,embeddedDim,embeddedDim,embeddedDim> d2d2d2_fd;
+
+ for (size_t i=0; i<embeddedDim; i++) {
+
+ FieldVector<double,embeddedDim> bPlus = b.globalCoordinates();
+ FieldVector<double,embeddedDim> bMinus = b.globalCoordinates();
+ bPlus[i] += eps;
+ bMinus[i] -= eps;
+
+ FieldMatrix<double,embeddedDim,embeddedDim> hPlus = getSecondDerivativeOfSecondArgumentFD<TargetSpace,embeddedDim>(a,TargetSpace(bPlus));
+ FieldMatrix<double,embeddedDim,embeddedDim> hMinus = getSecondDerivativeOfSecondArgumentFD<TargetSpace,embeddedDim>(a,TargetSpace(bMinus));
+
+ d2d2d2_fd[i] = hPlus;
+ d2d2d2_fd[i] -= hMinus;
+ d2d2d2_fd[i] /= 2*eps;
+
+ }
+
+ if ( (d2d2d2 - d2d2d2_fd).infinity_norm() > 200*eps) {
+ std::cout << className(a) << ": Analytical third derivative does not match fd approximation." << std::endl;
+ std::cout << "d2d2d2 Analytical:" << std::endl << d2d2d2 << std::endl;
+ std::cout << "d2d2d2 FD :" << std::endl << d2d2d2_fd << std::endl;
+ assert(false);
+ }
}
@@ -264,38 +264,38 @@ void testDerivativeOfHessianOfDistanceSquared(const TargetSpace& a, const Target
template <class TargetSpace>
void testMixedDerivativeOfHessianOfDistanceSquared(const TargetSpace& a, const TargetSpace& b)
{
- static const size_t embeddedDim = TargetSpace::embeddedDim;
-
- /////////////////////////////////////////////////////////////////////////////////////////////
- // Test mixed third derivative with respect to first (once) and second (twice) argument
- /////////////////////////////////////////////////////////////////////////////////////////////
-
- Tensor3<double,embeddedDim,embeddedDim,embeddedDim> d1d2d2 = TargetSpace::thirdDerivativeOfDistanceSquaredWRTFirst1AndSecond2Argument(a, b);
-
- Tensor3<double,embeddedDim,embeddedDim,embeddedDim> d1d2d2_fd;
-
- for (size_t i=0; i<embeddedDim; i++) {
-
- FieldVector<double,embeddedDim> aPlus = a.globalCoordinates();
- FieldVector<double,embeddedDim> aMinus = a.globalCoordinates();
- aPlus[i] += eps;
- aMinus[i] -= eps;
-
- FieldMatrix<double,embeddedDim,embeddedDim> hPlus = getSecondDerivativeOfSecondArgumentFD<TargetSpace,embeddedDim>(TargetSpace(aPlus),b);
- FieldMatrix<double,embeddedDim,embeddedDim> hMinus = getSecondDerivativeOfSecondArgumentFD<TargetSpace,embeddedDim>(TargetSpace(aMinus),b);
-
- d1d2d2_fd[i] = hPlus;
- d1d2d2_fd[i] -= hMinus;
- d1d2d2_fd[i] /= 2*eps;
-
- }
+ static const size_t embeddedDim = TargetSpace::embeddedDim;
- if ( (d1d2d2 - d1d2d2_fd).infinity_norm() > 200*eps ) {
- std::cout << className(a) << ": Analytical mixed third derivative does not match fd approximation." << std::endl;
- std::cout << "d1d2d2 Analytical:" << std::endl << d1d2d2 << std::endl;
- std::cout << "d1d2d2 FD :" << std::endl << d1d2d2_fd << std::endl;
- assert(false);
- }
+ /////////////////////////////////////////////////////////////////////////////////////////////
+ // Test mixed third derivative with respect to first (once) and second (twice) argument
+ /////////////////////////////////////////////////////////////////////////////////////////////
+
+ Tensor3<double,embeddedDim,embeddedDim,embeddedDim> d1d2d2 = TargetSpace::thirdDerivativeOfDistanceSquaredWRTFirst1AndSecond2Argument(a, b);
+
+ Tensor3<double,embeddedDim,embeddedDim,embeddedDim> d1d2d2_fd;
+
+ for (size_t i=0; i<embeddedDim; i++) {
+
+ FieldVector<double,embeddedDim> aPlus = a.globalCoordinates();
+ FieldVector<double,embeddedDim> aMinus = a.globalCoordinates();
+ aPlus[i] += eps;
+ aMinus[i] -= eps;
+
+ FieldMatrix<double,embeddedDim,embeddedDim> hPlus = getSecondDerivativeOfSecondArgumentFD<TargetSpace,embeddedDim>(TargetSpace(aPlus),b);
+ FieldMatrix<double,embeddedDim,embeddedDim> hMinus = getSecondDerivativeOfSecondArgumentFD<TargetSpace,embeddedDim>(TargetSpace(aMinus),b);
+
+ d1d2d2_fd[i] = hPlus;
+ d1d2d2_fd[i] -= hMinus;
+ d1d2d2_fd[i] /= 2*eps;
+
+ }
+
+ if ( (d1d2d2 - d1d2d2_fd).infinity_norm() > 200*eps ) {
+ std::cout << className(a) << ": Analytical mixed third derivative does not match fd approximation." << std::endl;
+ std::cout << "d1d2d2 Analytical:" << std::endl << d1d2d2 << std::endl;
+ std::cout << "d1d2d2 FD :" << std::endl << d1d2d2_fd << std::endl;
+ assert(false);
+ }
}
@@ -303,36 +303,36 @@ void testMixedDerivativeOfHessianOfDistanceSquared(const TargetSpace& a, const T
template <class TargetSpace>
void testDerivativesOfDistanceSquared(const TargetSpace& a, const TargetSpace& b)
{
-
- ///////////////////////////////////////////////////////////////////
- // Test derivative with respect to second argument
- ///////////////////////////////////////////////////////////////////
-
- testDerivativeOfDistanceSquared<TargetSpace>(a,b);
-
- ///////////////////////////////////////////////////////////////////
- // Test second derivative with respect to second argument
- ///////////////////////////////////////////////////////////////////
-
- testHessianOfDistanceSquared<TargetSpace>(a,b);
-
- //////////////////////////////////////////////////////////////////////////////
- // Test mixed second derivative with respect to first and second argument
- //////////////////////////////////////////////////////////////////////////////
-
- testMixedDerivativesOfDistanceSquared<TargetSpace>(a,b);
-
- /////////////////////////////////////////////////////////////////////////////////////////////
- // Test third derivative with respect to second argument
- /////////////////////////////////////////////////////////////////////////////////////////////
-
- testDerivativeOfHessianOfDistanceSquared<TargetSpace>(a,b);
-
- /////////////////////////////////////////////////////////////////////////////////////////////
- // Test mixed third derivative with respect to first (once) and second (twice) argument
- /////////////////////////////////////////////////////////////////////////////////////////////
-
- testMixedDerivativeOfHessianOfDistanceSquared<TargetSpace>(a,b);
+
+ ///////////////////////////////////////////////////////////////////
+ // Test derivative with respect to second argument
+ ///////////////////////////////////////////////////////////////////
+
+ testDerivativeOfDistanceSquared<TargetSpace>(a,b);
+
+ ///////////////////////////////////////////////////////////////////
+ // Test second derivative with respect to second argument
+ ///////////////////////////////////////////////////////////////////
+
+ testHessianOfDistanceSquared<TargetSpace>(a,b);
+
+ //////////////////////////////////////////////////////////////////////////////
+ // Test mixed second derivative with respect to first and second argument
+ //////////////////////////////////////////////////////////////////////////////
+
+ testMixedDerivativesOfDistanceSquared<TargetSpace>(a,b);
+
+ /////////////////////////////////////////////////////////////////////////////////////////////
+ // Test third derivative with respect to second argument
+ /////////////////////////////////////////////////////////////////////////////////////////////
+
+ testDerivativeOfHessianOfDistanceSquared<TargetSpace>(a,b);
+
+ /////////////////////////////////////////////////////////////////////////////////////////////
+ // Test mixed third derivative with respect to first (once) and second (twice) argument
+ /////////////////////////////////////////////////////////////////////////////////////////////
+
+ testMixedDerivativeOfHessianOfDistanceSquared<TargetSpace>(a,b);
}
@@ -346,80 +346,80 @@ void testDerivativesOfDistanceSquared(const TargetSpace& a, const TargetSpace& b
// come back.
namespace Dune::GFE
{
- void testUsingIOStream()
- {
- std::cout << "dummy text" << std::endl;
- }
+ void testUsingIOStream()
+ {
+ std::cout << "dummy text" << std::endl;
+ }
}
template <class TargetSpace>
void test()
{
- std::cout << "Testing class " << className<TargetSpace>() << std::endl;
-
- std::vector<TargetSpace> testPoints;
- ValueFactory<TargetSpace>::get(testPoints);
-
- int nTestPoints = testPoints.size();
-
- // Test each element in the list
- for (int i=0; i<nTestPoints; i++) {
-
- //testOrthonormalFrame<TargetSpace>(testPoints[i]);
-
- for (int j=0; j<nTestPoints; j++) {
-
- std::vector<TargetSpace> testPointPair(2);
- testPointPair[0] = testPoints[i];
- testPointPair[1] = testPoints[j];
- if (diameter(testPointPair) > TargetSpace::convexityRadius)
- continue;
-
- // Test the exponential map and the logarithm
- testExpLog(testPoints[i], testPoints[j]);
-
- // Test the various derivatives of the squared distance
- testDerivativesOfDistanceSquared<TargetSpace>(testPoints[i], testPoints[j]);
-
- }
-
+ std::cout << "Testing class " << className<TargetSpace>() << std::endl;
+
+ std::vector<TargetSpace> testPoints;
+ ValueFactory<TargetSpace>::get(testPoints);
+
+ int nTestPoints = testPoints.size();
+
+ // Test each element in the list
+ for (int i=0; i<nTestPoints; i++) {
+
+ //testOrthonormalFrame<TargetSpace>(testPoints[i]);
+
+ for (int j=0; j<nTestPoints; j++) {
+
+ std::vector<TargetSpace> testPointPair(2);
+ testPointPair[0] = testPoints[i];
+ testPointPair[1] = testPoints[j];
+ if (diameter(testPointPair) > TargetSpace::convexityRadius)
+ continue;
+
+ // Test the exponential map and the logarithm
+ testExpLog(testPoints[i], testPoints[j]);
+
+ // Test the various derivatives of the squared distance
+ testDerivativesOfDistanceSquared<TargetSpace>(testPoints[i], testPoints[j]);
+
}
-
- // Test whether we can rebind to another number type
- using FTargetSpace = typename TargetSpace::template rebind<float>::other;
- // Can we construct an object of that rebound type?
- FTargetSpace fTargetSpace;
+ }
+
+ // Test whether we can rebind to another number type
+ using FTargetSpace = typename TargetSpace::template rebind<float>::other;
+
+ // Can we construct an object of that rebound type?
+ FTargetSpace fTargetSpace;
}
int main() try
{
- // Test the RealTuple class
- test<RealTuple<double,1> >();
- test<RealTuple<double,3> >();
-
- // Test the UnitVector class
- test<UnitVector<double,2> >();
- test<UnitVector<double,3> >();
- test<UnitVector<double,4> >();
-
- // Test the rotation class
- test<Rotation<double,3> >();
-
- // Test the ProductManifold class
- test<Dune::GFE::ProductManifold<RealTuple<double,1>,Rotation<double,3>,UnitVector<double,2>>>();
- test<Dune::GFE::ProductManifold<Rotation<double,3>,UnitVector<double,5>>>();
-
- // Test the RigidBodyMotion class
- test<RigidBodyMotion<double,3> >();
-//
-// test<HyperbolicHalfspacePoint<double,2> >();
+ // Test the RealTuple class
+ test<RealTuple<double,1> >();
+ test<RealTuple<double,3> >();
+
+ // Test the UnitVector class
+ test<UnitVector<double,2> >();
+ test<UnitVector<double,3> >();
+ test<UnitVector<double,4> >();
+
+ // Test the rotation class
+ test<Rotation<double,3> >();
-} catch (Exception& e) {
+ // Test the ProductManifold class
+ test<Dune::GFE::ProductManifold<RealTuple<double,1>,Rotation<double,3>,UnitVector<double,2> > >();
+ test<Dune::GFE::ProductManifold<Rotation<double,3>,UnitVector<double,5> > >();
- std::cout << e.what() << std::endl;
+ // Test the RigidBodyMotion class
+ test<RigidBodyMotion<double,3> >();
+ //
+ // test<HyperbolicHalfspacePoint<double,2> >();
}
+catch (Exception& e) {
+ std::cout << e.what() << std::endl;
+
+}
diff --git a/test/test-cylinder.cc b/test/test-cylinder.cc
index 76419928..1fb5090c 100644
--- a/test/test-cylinder.cc
+++ b/test/test-cylinder.cc
@@ -31,84 +31,84 @@ using namespace Dune;
int main (int argc, char *argv[])
{
- MPIHelper::instance(argc,argv);
- // Cylinder
- static const double radius = 4;
- static const double height = 2;
- static const double cylinderFraction = 0.75;
-
- /////////////////////////////////////////////
- // Create the grid for the cylinder
- /////////////////////////////////////////////
-
- struct CylinderCreator
- : public Dune :: AnalyticalCoordFunction< double, 2, 3, CylinderCreator >
+ MPIHelper::instance(argc,argv);
+ // Cylinder
+ static const double radius = 4;
+ static const double height = 2;
+ static const double cylinderFraction = 0.75;
+
+ /////////////////////////////////////////////
+ // Create the grid for the cylinder
+ /////////////////////////////////////////////
+
+ struct CylinderCreator
+ : public Dune :: AnalyticalCoordFunction< double, 2, 3, CylinderCreator >
+ {
+ FieldVector<double,3> operator() ( const FieldVector<double, 2> &x ) const
{
- FieldVector<double,3> operator() ( const FieldVector<double, 2> &x ) const
- {
- FieldVector<double,3> y;
- y[0] = radius * std::cos(x[0]);
- y[1] = radius * std::sin(x[0]);
- y[2] = x[1];
- return y;
- }
- };
-
- using GridType = Dune::GeometryGrid< YaspGrid<gridDim>, CylinderCreator>;
- std::shared_ptr<YaspGrid<gridDim>> hostGrid;
- hostGrid = Dune::StructuredGridFactory<Dune::YaspGrid<2>>::createCubeGrid({0, 0}, {cylinderFraction*2*pi, height}, {elementsCircle,2});
- auto cylinderCreator = std::make_shared<CylinderCreator>();
- auto grid = std::make_shared<GridType>(hostGrid, cylinderCreator);
- auto gridView = grid->leafGridView();
-
- auto cylinder = CylinderProjection<double>{radius};
- auto polynomialCylinderGF = analyticDiscreteFunction(cylinder, *grid, approximationOrderAnalytics);
-
- auto analyticCylinderGF = cylinderGridFunction<GridType>(radius);
- auto cylinderLocalFunction = localFunction(analyticCylinderGF);
-
- auto quadOrder = 10;
- for (const auto& element : elements(gridView, Dune::Partitions::interior)) {
- using DT = decltype(gridView)::ctype;
-
- Dune::CurvedGeometry<DT, gridDim, dimWorld, Dune::CurvedGeometryTraits<DT, Dune::LagrangeLFECache<DT,DT,gridDim>>>
- polynomialGeometry(Dune::referenceElement(element.geometry()), [element, polynomialCylinderGF](const auto& local) {
- auto localGridFunction = localFunction(polynomialCylinderGF);
- localGridFunction.bind(element);
- return localGridFunction(local);
- }, approximationOrderGeometry);
-
- cylinderLocalFunction.bind(element);
- auto localGeometry = Dune::DefaultLocalGeometry<double,2,2>{};
- auto analyticGeometry = Dune::LocalFunctionGeometry{element.type(), cylinderLocalFunction, localGeometry};
- Dune::LagrangeLFECache<DT,DT,gridDim> cache(approximationOrderAnalytics);
- auto refEle = referenceElement(element);
- auto lFE = cache.get(refEle.type());
-
- const auto& quad = Dune::QuadratureRules<DT, gridDim>::rule(element.type(), quadOrder);
- for (size_t pt=0; pt<quad.size(); pt++) {
- // Check if mean curvature is correct
- auto realMeanCurvature = std::abs(cylinder.mean_curvature(polynomialGeometry.global(quad[pt].position())));
-
- auto normalDerivativeP = polynomialGeometry.normalGradient(quad[pt].position());
- auto approximatedCurvatureP = 0.5*std::abs(Dune::GFE::trace(normalDerivativeP));
- auto relativeDifferenceP = std::abs((realMeanCurvature - approximatedCurvatureP)/realMeanCurvature);
-
- auto normalDerivativeA = analyticGeometry.normalGradient(quad[pt].position(), lFE);
- auto approximatedCurvatureA = 0.5*std::abs(Dune::GFE::trace(normalDerivativeA));
- std::cout << approximatedCurvatureA << std::endl;
- auto relativeDifferenceA = std::abs((realMeanCurvature - approximatedCurvatureA)/realMeanCurvature);
-
- if (relativeDifferenceP > 0.005){
- std::cerr << "At point " << polynomialGeometry.global(quad[pt].position()) << " the curvature (approximated using a polynomial) is "
- << approximatedCurvatureP << " but " << realMeanCurvature << " was expected!" << std::endl;
- return 1;
- }
- if (relativeDifferenceA > 0.005){
- std::cerr << "At point " << polynomialGeometry.global(quad[pt].position()) << " the curvature (approximated using the real analytic cylinder function) is "
- << approximatedCurvatureA << " but " << realMeanCurvature << " was expected!" << std::endl;
- return 1;
- }
- }
+ FieldVector<double,3> y;
+ y[0] = radius * std::cos(x[0]);
+ y[1] = radius * std::sin(x[0]);
+ y[2] = x[1];
+ return y;
}
+ };
+
+ using GridType = Dune::GeometryGrid< YaspGrid<gridDim>, CylinderCreator>;
+ std::shared_ptr<YaspGrid<gridDim> > hostGrid;
+ hostGrid = Dune::StructuredGridFactory<Dune::YaspGrid<2> >::createCubeGrid({0, 0}, {cylinderFraction*2*pi, height}, {elementsCircle,2});
+ auto cylinderCreator = std::make_shared<CylinderCreator>();
+ auto grid = std::make_shared<GridType>(hostGrid, cylinderCreator);
+ auto gridView = grid->leafGridView();
+
+ auto cylinder = CylinderProjection<double>{radius};
+ auto polynomialCylinderGF = analyticDiscreteFunction(cylinder, *grid, approximationOrderAnalytics);
+
+ auto analyticCylinderGF = cylinderGridFunction<GridType>(radius);
+ auto cylinderLocalFunction = localFunction(analyticCylinderGF);
+
+ auto quadOrder = 10;
+ for (const auto& element : elements(gridView, Dune::Partitions::interior)) {
+ using DT = decltype(gridView)::ctype;
+
+ Dune::CurvedGeometry<DT, gridDim, dimWorld, Dune::CurvedGeometryTraits<DT, Dune::LagrangeLFECache<DT,DT,gridDim> > >
+ polynomialGeometry(Dune::referenceElement(element.geometry()), [element, polynomialCylinderGF](const auto& local) {
+ auto localGridFunction = localFunction(polynomialCylinderGF);
+ localGridFunction.bind(element);
+ return localGridFunction(local);
+ }, approximationOrderGeometry);
+
+ cylinderLocalFunction.bind(element);
+ auto localGeometry = Dune::DefaultLocalGeometry<double,2,2>{};
+ auto analyticGeometry = Dune::LocalFunctionGeometry{element.type(), cylinderLocalFunction, localGeometry};
+ Dune::LagrangeLFECache<DT,DT,gridDim> cache(approximationOrderAnalytics);
+ auto refEle = referenceElement(element);
+ auto lFE = cache.get(refEle.type());
+
+ const auto& quad = Dune::QuadratureRules<DT, gridDim>::rule(element.type(), quadOrder);
+ for (size_t pt=0; pt<quad.size(); pt++) {
+ // Check if mean curvature is correct
+ auto realMeanCurvature = std::abs(cylinder.mean_curvature(polynomialGeometry.global(quad[pt].position())));
+
+ auto normalDerivativeP = polynomialGeometry.normalGradient(quad[pt].position());
+ auto approximatedCurvatureP = 0.5*std::abs(Dune::GFE::trace(normalDerivativeP));
+ auto relativeDifferenceP = std::abs((realMeanCurvature - approximatedCurvatureP)/realMeanCurvature);
+
+ auto normalDerivativeA = analyticGeometry.normalGradient(quad[pt].position(), lFE);
+ auto approximatedCurvatureA = 0.5*std::abs(Dune::GFE::trace(normalDerivativeA));
+ std::cout << approximatedCurvatureA << std::endl;
+ auto relativeDifferenceA = std::abs((realMeanCurvature - approximatedCurvatureA)/realMeanCurvature);
+
+ if (relativeDifferenceP > 0.005) {
+ std::cerr << "At point " << polynomialGeometry.global(quad[pt].position()) << " the curvature (approximated using a polynomial) is "
+ << approximatedCurvatureP << " but " << realMeanCurvature << " was expected!" << std::endl;
+ return 1;
+ }
+ if (relativeDifferenceA > 0.005) {
+ std::cerr << "At point " << polynomialGeometry.global(quad[pt].position()) << " the curvature (approximated using the real analytic cylinder function) is "
+ << approximatedCurvatureA << " but " << realMeanCurvature << " was expected!" << std::endl;
+ return 1;
+ }
+ }
+ }
}
diff --git a/test/valuefactory.hh b/test/valuefactory.hh
index 03f3f0af..867fd452 100644
--- a/test/valuefactory.hh
+++ b/test/valuefactory.hh
@@ -18,7 +18,7 @@ template <class T>
class ValueFactory
{
public:
- static void get(std::vector<T>& values);
+ static void get(std::vector<T>& values);
};
@@ -31,17 +31,17 @@ template <>
class ValueFactory<RealTuple<double,1> >
{
public:
- static void get(std::vector<RealTuple<double,1> >& values) {
+ static void get(std::vector<RealTuple<double,1> >& values) {
- std::vector<double> testPoints = {-3, -1, 0, 2, 4};
+ std::vector<double> testPoints = {-3, -1, 0, 2, 4};
- values.resize(testPoints.size());
+ values.resize(testPoints.size());
- // Set up elements of S^1
- for (size_t i=0; i<values.size(); i++)
- values[i] = RealTuple<double,1>(testPoints[i]);
+ // Set up elements of S^1
+ for (size_t i=0; i<values.size(); i++)
+ values[i] = RealTuple<double,1>(testPoints[i]);
- }
+ }
};
@@ -53,20 +53,20 @@ template <>
class ValueFactory<RealTuple<double,3> >
{
public:
- static void get(std::vector<RealTuple<double,3> >& values) {
+ static void get(std::vector<RealTuple<double,3> >& values) {
- std::vector<Dune::FieldVector<double,3> > testPoints = {{1,0,0}, {0,1,0}, {-0.838114,0.356751,-0.412667},
- {-0.490946,-0.306456,0.81551},{-0.944506,0.123687,-0.304319},
- {-0.6,0.1,-0.2},{0.45,0.12,0.517},
- {-0.1,0.3,-0.1},{-0.444506,0.123687,0.104319},{-0.7,-0.123687,-0.304319}};
+ std::vector<Dune::FieldVector<double,3> > testPoints = {{1,0,0}, {0,1,0}, {-0.838114,0.356751,-0.412667},
+ {-0.490946,-0.306456,0.81551},{-0.944506,0.123687,-0.304319},
+ {-0.6,0.1,-0.2},{0.45,0.12,0.517},
+ {-0.1,0.3,-0.1},{-0.444506,0.123687,0.104319},{-0.7,-0.123687,-0.304319}};
- values.resize(testPoints.size());
+ values.resize(testPoints.size());
- // Set up elements of S^1
- for (size_t i=0; i<values.size(); i++)
- values[i] = RealTuple<double,3>(testPoints[i]);
+ // Set up elements of S^1
+ for (size_t i=0; i<values.size(); i++)
+ values[i] = RealTuple<double,3>(testPoints[i]);
- }
+ }
};
@@ -78,17 +78,17 @@ template <>
class ValueFactory<UnitVector<double,2> >
{
public:
- static void get(std::vector<UnitVector<double,2> >& values) {
+ static void get(std::vector<UnitVector<double,2> >& values) {
- std::vector<std::array<double,2> > testPoints = {{1,0}, {0.5,0.5}, {0,1}, {-0.5,0.5}, {-1,0}, {-0.5,-0.5}, {0,-1}, {0.5,-0.5}, {0.1,1}, {1,.1}};
+ std::vector<std::array<double,2> > testPoints = {{1,0}, {0.5,0.5}, {0,1}, {-0.5,0.5}, {-1,0}, {-0.5,-0.5}, {0,-1}, {0.5,-0.5}, {0.1,1}, {1,.1}};
- values.resize(testPoints.size());
+ values.resize(testPoints.size());
- // Set up elements of S^1
- for (size_t i=0; i<values.size(); i++)
- values[i] = UnitVector<double,2>(testPoints[i]);
+ // Set up elements of S^1
+ for (size_t i=0; i<values.size(); i++)
+ values[i] = UnitVector<double,2>(testPoints[i]);
- }
+ }
};
@@ -101,20 +101,20 @@ template <>
class ValueFactory<UnitVector<double,3> >
{
public:
- static void get(std::vector<UnitVector<double,3> >& values) {
+ static void get(std::vector<UnitVector<double,3> >& values) {
- std::vector<std::array<double,3> > testPoints = {{1,0,0}, {0,1,0}, {-0.838114,0.356751,-0.412667},
- {-0.490946,-0.306456,0.81551},{-0.944506,0.123687,-0.304319},
- {-0.6,0.1,-0.2},{0.45,0.12,0.517},
- {-0.1,0.3,-0.1},{-0.444506,0.123687,0.104319},{-0.7,-0.123687,-0.304319}};
+ std::vector<std::array<double,3> > testPoints = {{1,0,0}, {0,1,0}, {-0.838114,0.356751,-0.412667},
+ {-0.490946,-0.306456,0.81551},{-0.944506,0.123687,-0.304319},
+ {-0.6,0.1,-0.2},{0.45,0.12,0.517},
+ {-0.1,0.3,-0.1},{-0.444506,0.123687,0.104319},{-0.7,-0.123687,-0.304319}};
- values.resize(testPoints.size());
+ values.resize(testPoints.size());
- // Set up elements of S^1
- for (size_t i=0; i<values.size(); i++)
- values[i] = UnitVector<double,3>(testPoints[i]);
+ // Set up elements of S^1
+ for (size_t i=0; i<values.size(); i++)
+ values[i] = UnitVector<double,3>(testPoints[i]);
- }
+ }
};
@@ -127,21 +127,21 @@ template <>
class ValueFactory<UnitVector<double,4> >
{
public:
- static void get(std::vector<UnitVector<double,4> >& values) {
+ static void get(std::vector<UnitVector<double,4> >& values) {
- std::vector<std::array<double,4> > testPoints = {{1,0,0,0}, {0,1,0,0}, {-0.838114,0.356751,-0.412667,0.5},
- {-0.490946,-0.306456,0.81551,0.23},{-0.944506,0.123687,-0.304319,-0.7},
- {-0.6,0.1,-0.2,0.8},{0.45,0.12,0.517,0},
- {-0.1,0.3,-0.1,0.73},{-0.444506,0.123687,0.104319,-0.23},{-0.7,-0.123687,-0.304319,0.72}};
+ std::vector<std::array<double,4> > testPoints = {{1,0,0,0}, {0,1,0,0}, {-0.838114,0.356751,-0.412667,0.5},
+ {-0.490946,-0.306456,0.81551,0.23},{-0.944506,0.123687,-0.304319,-0.7},
+ {-0.6,0.1,-0.2,0.8},{0.45,0.12,0.517,0},
+ {-0.1,0.3,-0.1,0.73},{-0.444506,0.123687,0.104319,-0.23},{-0.7,-0.123687,-0.304319,0.72}};
- values.resize(testPoints.size());
+ values.resize(testPoints.size());
- // Set up elements of S^1
- for (size_t i=0; i<values.size(); i++)
- values[i] = UnitVector<double,4>(testPoints[i]);
+ // Set up elements of S^1
+ for (size_t i=0; i<values.size(); i++)
+ values[i] = UnitVector<double,4>(testPoints[i]);
- }
+ }
};
@@ -154,21 +154,21 @@ template <>
class ValueFactory<Rotation<double,3> >
{
public:
- static void get(std::vector<Rotation<double,3> >& values) {
+ static void get(std::vector<Rotation<double,3> >& values) {
- std::vector<std::array<double,4> > testPoints = {{1,0,0,0}, {0,1,0,0}, {-0.838114,0.356751,-0.412667,0.5},
- {-0.490946,-0.306456,0.81551,0.23},{-0.944506,0.123687,-0.304319,-0.7},
- {-0.6,0.1,-0.2,0.8},{0.45,0.12,0.517,0},
- {-0.1,0.3,-0.1,0.73},{-0.444506,0.123687,0.104319,-0.23},{-0.7,-0.123687,-0.304319,0.72},
- {-0.035669, -0.463824, -0.333265, 0.820079}, {0.0178678, 0.916836, 0.367358, 0.155374}};
+ std::vector<std::array<double,4> > testPoints = {{1,0,0,0}, {0,1,0,0}, {-0.838114,0.356751,-0.412667,0.5},
+ {-0.490946,-0.306456,0.81551,0.23},{-0.944506,0.123687,-0.304319,-0.7},
+ {-0.6,0.1,-0.2,0.8},{0.45,0.12,0.517,0},
+ {-0.1,0.3,-0.1,0.73},{-0.444506,0.123687,0.104319,-0.23},{-0.7,-0.123687,-0.304319,0.72},
+ {-0.035669, -0.463824, -0.333265, 0.820079}, {0.0178678, 0.916836, 0.367358, 0.155374}};
- values.resize(testPoints.size());
+ values.resize(testPoints.size());
- // Set up elements of S^1
- for (std::size_t i=0; i<values.size(); i++)
- values[i] = Rotation<double,3>(testPoints[i]);
+ // Set up elements of S^1
+ for (std::size_t i=0; i<values.size(); i++)
+ values[i] = Rotation<double,3>(testPoints[i]);
- }
+ }
};
@@ -180,23 +180,23 @@ template <>
class ValueFactory<RigidBodyMotion<double,3> >
{
public:
- static void get(std::vector<RigidBodyMotion<double,3> >& values) {
+ static void get(std::vector<RigidBodyMotion<double,3> >& values) {
- std::vector<RealTuple<double,3> > rValues;
- ValueFactory<RealTuple<double,3> >::get(rValues);
+ std::vector<RealTuple<double,3> > rValues;
+ ValueFactory<RealTuple<double,3> >::get(rValues);
- std::vector<Rotation<double,3> > qValues;
- ValueFactory<Rotation<double,3> >::get(qValues);
+ std::vector<Rotation<double,3> > qValues;
+ ValueFactory<Rotation<double,3> >::get(qValues);
- int nTestPoints = std::min(rValues.size(), qValues.size());
+ int nTestPoints = std::min(rValues.size(), qValues.size());
- values.resize(nTestPoints);
+ values.resize(nTestPoints);
- // Set up elements of SE(3)
- for (int i=0; i<nTestPoints; i++)
- values[i] = RigidBodyMotion<double,3>(rValues[i].globalCoordinates(),qValues[i]);
+ // Set up elements of SE(3)
+ for (int i=0; i<nTestPoints; i++)
+ values[i] = RigidBodyMotion<double,3>(rValues[i].globalCoordinates(),qValues[i]);
- }
+ }
};
@@ -208,18 +208,18 @@ template <class T, int N>
class ValueFactory<Dune::FieldMatrix<T,N,N> >
{
public:
- static void get(std::vector<Dune::FieldMatrix<T,N,N> >& values) {
+ static void get(std::vector<Dune::FieldMatrix<T,N,N> >& values) {
- int nTestPoints = 10;
- values.resize(nTestPoints);
+ int nTestPoints = 10;
+ values.resize(nTestPoints);
- // Set up elements of T^{N \times N}
- for (int i=0; i<nTestPoints; i++)
- for (int j=0; j<N; j++)
- for (int k=0; k<N; k++)
- values[i][j][k] = std::rand()%100 - 50;
+ // Set up elements of T^{N \times N}
+ for (int i=0; i<nTestPoints; i++)
+ for (int j=0; j<N; j++)
+ for (int k=0; k<N; k++)
+ values[i][j][k] = std::rand()%100 - 50;
- }
+ }
};
@@ -232,49 +232,49 @@ template <class T, int N>
class ValueFactory<OrthogonalMatrix<T,N> >
{
- static Dune::FieldVector<T,N> proj(const Dune::FieldVector<T,N>& u, const Dune::FieldVector<T,N>& v)
- {
- Dune::FieldVector<T,N> result = u;
- result *= (v*u) / (u*u);
- return result;
- }
+ static Dune::FieldVector<T,N> proj(const Dune::FieldVector<T,N>& u, const Dune::FieldVector<T,N>& v)
+ {
+ Dune::FieldVector<T,N> result = u;
+ result *= (v*u) / (u*u);
+ return result;
+ }
public:
- static void get(std::vector<OrthogonalMatrix<T,N> >& values) {
+ static void get(std::vector<OrthogonalMatrix<T,N> >& values) {
- // Get general matrices
- std::vector<Dune::FieldMatrix<T,N,N> > mValues;
- ValueFactory<Dune::FieldMatrix<T,N,N> >::get(mValues);
+ // Get general matrices
+ std::vector<Dune::FieldMatrix<T,N,N> > mValues;
+ ValueFactory<Dune::FieldMatrix<T,N,N> >::get(mValues);
- values.resize(mValues.size());
+ values.resize(mValues.size());
- // Do Gram-Schmidt orthogonalization of the rows
- for (size_t m=0; m<mValues.size(); m++) {
+ // Do Gram-Schmidt orthogonalization of the rows
+ for (size_t m=0; m<mValues.size(); m++) {
- Dune::FieldMatrix<T,N,N>& v = mValues[m];
+ Dune::FieldMatrix<T,N,N>& v = mValues[m];
- if (std::fabs(v.determinant()) < 1e-6)
- continue;
+ if (std::fabs(v.determinant()) < 1e-6)
+ continue;
- for (int j=0; j<N; j++) {
+ for (int j=0; j<N; j++) {
- for (int i=0; i<j; i++) {
+ for (int i=0; i<j; i++) {
- // v_j = v_j - proj_{v_i} v_j
- v[j] -= proj(v[i],v[j]);
+ // v_j = v_j - proj_{v_i} v_j
+ v[j] -= proj(v[i],v[j]);
- }
-
- // normalize
- v[j] /= v[j].two_norm();
- }
+ }
- values[m] = OrthogonalMatrix<T,N>(v);
+ // normalize
+ v[j] /= v[j].two_norm();
+ }
- }
+ values[m] = OrthogonalMatrix<T,N>(v);
}
+ }
+
};
/** \brief A class that creates sets of values of various types, to be used in unit tests
@@ -285,20 +285,20 @@ template <>
class ValueFactory<HyperbolicHalfspacePoint<double,2> >
{
public:
- static void get(std::vector<HyperbolicHalfspacePoint<double,2> >& values) {
+ static void get(std::vector<HyperbolicHalfspacePoint<double,2> >& values) {
- std::vector<Dune::FieldVector<double,2> > testPoints = {{0,2}, {0,1}, {0,0.5},
- {-0.490946,0.81551},{-0.944506,0.304319},
- {-0.6,0.2},{0.45,0.517},
- {-0.1,0.1},{-0.444506,0.104319},{-0.7,0.304319}};
+ std::vector<Dune::FieldVector<double,2> > testPoints = {{0,2}, {0,1}, {0,0.5},
+ {-0.490946,0.81551},{-0.944506,0.304319},
+ {-0.6,0.2},{0.45,0.517},
+ {-0.1,0.1},{-0.444506,0.104319},{-0.7,0.304319}};
- values.resize(testPoints.size());
+ values.resize(testPoints.size());
- // Set up elements of S^1
- for (size_t i=0; i<values.size(); i++)
- values[i] = HyperbolicHalfspacePoint<double,2>(testPoints[i]);
+ // Set up elements of S^1
+ for (size_t i=0; i<values.size(); i++)
+ values[i] = HyperbolicHalfspacePoint<double,2>(testPoints[i]);
- }
+ }
};
@@ -310,20 +310,20 @@ template <>
class ValueFactory<HyperbolicHalfspacePoint<double,3> >
{
public:
- static void get(std::vector<HyperbolicHalfspacePoint<double,3> >& values) {
+ static void get(std::vector<HyperbolicHalfspacePoint<double,3> >& values) {
- std::vector<Dune::FieldVector<double,3> > testPoints = {{1,0,0.01}, {0,1,0.01}, {-0.838114,0.356751,0.412667},
- {-0.490946,-0.306456,0.81551},{-0.944506,0.123687,0.304319},
- {-0.6,0.1,0.2},{0.45,0.12,0.517},
- {-0.1,0.3,0.1},{-0.444506,0.123687,0.104319},{-0.7,-0.123687,0.304319}};
+ std::vector<Dune::FieldVector<double,3> > testPoints = {{1,0,0.01}, {0,1,0.01}, {-0.838114,0.356751,0.412667},
+ {-0.490946,-0.306456,0.81551},{-0.944506,0.123687,0.304319},
+ {-0.6,0.1,0.2},{0.45,0.12,0.517},
+ {-0.1,0.3,0.1},{-0.444506,0.123687,0.104319},{-0.7,-0.123687,0.304319}};
- values.resize(testPoints.size());
+ values.resize(testPoints.size());
- // Set up elements of S^1
- for (size_t i=0; i<values.size(); i++)
- values[i] = HyperbolicHalfspacePoint<double,3>(testPoints[i]);
+ // Set up elements of S^1
+ for (size_t i=0; i<values.size(); i++)
+ values[i] = HyperbolicHalfspacePoint<double,3>(testPoints[i]);
- }
+ }
};
@@ -332,26 +332,27 @@ public:
/** \brief A class that creates sets of values of various types, to be used in unit tests
-*
-* This is the specialization for ProducManifold<...>
-*/
-template <typename ...TargetSpaces>
+ *
+ * This is the specialization for ProducManifold<...>
+ */
+template <typename ... TargetSpaces>
class ValueFactory<Dune::GFE::ProductManifold<TargetSpaces...> >
{
-using TargetSpace = Dune::GFE::ProductManifold<TargetSpaces...>;
+ using TargetSpace = Dune::GFE::ProductManifold<TargetSpaces...>;
public:
- static void get(std::vector<TargetSpace >& values) {
+ static void get(std::vector<TargetSpace >& values) {
- std::vector<typename TargetSpace::CoordinateType > testPoints(10);
+ std::vector<typename TargetSpace::CoordinateType > testPoints(10);
- std::generate(testPoints.begin(), testPoints.end(), [](){
- return Dune::GFE::randomFieldVector<typename TargetSpace::field_type,TargetSpace::CoordinateType::dimension>(0.9,1.1) ; });
+ std::generate(testPoints.begin(), testPoints.end(), [](){
+ return Dune::GFE::randomFieldVector<typename TargetSpace::field_type,TargetSpace::CoordinateType::dimension>(0.9,1.1) ;
+ });
- values.resize(testPoints.size());
+ values.resize(testPoints.size());
- std::transform(testPoints.cbegin(),testPoints.cend(),values.begin(),[](const auto& testPoint){return TargetSpace(testPoint);});
- }
+ std::transform(testPoints.cbegin(),testPoints.cend(),values.begin(),[](const auto& testPoint){return TargetSpace(testPoint);});
+ }
};
--
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