diff --git a/.gitignore b/.gitignore
index 8e7e8b85ec393e4a36ca51d4fef008181303e9e7..dd833d9e8e6e3baa958a74016574a50c10786f56 100644
--- a/.gitignore
+++ b/.gitignore
@@ -6,6 +6,20 @@ build/
# ignore python files
#*.pyc
+# ignore pdfs
+*.pdf
+
+#ignore log
+*.log
+
+# ignore vts
+*.vts
+*.vtu
+
+# ignore png
+*.png
+
+
#ignore kdevelop files
*.kdev4
diff --git a/src/1-ParameterFamily_G+_Flat.py b/src/1-ParameterFamily_G+_Flat.py
new file mode 100644
index 0000000000000000000000000000000000000000..3c17616257af70505fc1b718e9b86478abb07c63
--- /dev/null
+++ b/src/1-ParameterFamily_G+_Flat.py
@@ -0,0 +1,1111 @@
+import numpy as np
+import matplotlib.pyplot as plt
+import sympy as sym
+import math
+import os
+import subprocess
+import fileinput
+import re
+import matlab.engine
+import sys
+from ClassifyMin import *
+from HelperFunctions import *
+# from CellScript import *
+from mpl_toolkits.mplot3d import Axes3D
+import matplotlib.cm as cm
+from vtk.util import numpy_support
+from pyevtk.hl import gridToVTK
+import time
+import matplotlib.ticker as ticker
+
+import matplotlib as mpl
+from matplotlib.ticker import MultipleLocator,FormatStrFormatter,MaxNLocator
+import pandas as pd
+
+import seaborn as sns
+import matplotlib.colors as mcolors
+
+from chart_studio import plotly
+import plotly.graph_objs as go
+import plotly.express as px
+import plotly.colors
+# from matplotlib import rc
+# rc('text', usetex=True) # Use LaTeX font
+#
+# import seaborn as sns
+# sns.set(color_codes=True)
+
+
+def show(fig):
+ import io
+ import plotly.io as pio
+ from PIL import Image
+ buf = io.BytesIO()
+ pio.write_image(fig, buf)
+ img = Image.open(buf)
+ img.show()
+
+
+
+
+def add_arrow(line, position=None, direction='right', size=15, color=None):
+ """
+ add an arrow to a line.
+
+ line: Line2D object
+ position: x-position of the arrow. If None, mean of xdata is taken
+ direction: 'left' or 'right'
+ size: size of the arrow in fontsize points
+ color: if None, line color is taken.
+ """
+ if color is None:
+ color = line.get_color()
+
+ xdata = line.get_xdata()
+ ydata = line.get_ydata()
+
+ if position is None:
+ position = xdata.mean()
+ # find closest index
+ start_ind = np.argmin(np.absolute(xdata - position))
+ if direction == 'right':
+ end_ind = start_ind + 1
+ else:
+ end_ind = start_ind - 1
+
+ line.axes.annotate('',
+ xytext=(xdata[start_ind], ydata[start_ind]),
+ xy=(xdata[end_ind], ydata[end_ind]),
+ arrowprops=dict(arrowstyle="->", color=color),
+ size=size
+ )
+
+
+# set the colormap and centre the colorbar
+class MidpointNormalize(mcolors.Normalize):
+ """
+ Normalise the colorbar so that diverging bars work there way either side from a prescribed midpoint value)
+
+ e.g. im=ax1.imshow(array, norm=MidpointNormalize(midpoint=0.,vmin=-100, vmax=100))
+ """
+ def __init__(self, vmin=None, vmax=None, midpoint=None, clip=False):
+ self.midpoint = midpoint
+ mcolors.Normalize.__init__(self, vmin, vmax, clip)
+
+ def __call__(self, value, clip=None):
+ # I'm ignoring masked values and all kinds of edge cases to make a
+ # simple example...
+ x, y = [self.vmin, self.midpoint, self.vmax], [0, 0.5, 1]
+ return np.ma.masked_array(np.interp(value, x, y), np.isnan(value))
+
+
+
+def set_size(width, fraction=1):
+ """Set figure dimensions to avoid scaling in LaTeX.
+
+ Parameters
+ ----------
+ width: float
+ Document textwidth or columnwidth in pts
+ fraction: float, optional
+ Fraction of the width which you wish the figure to occupy
+
+ Returns
+ -------
+ fig_dim: tuple
+ Dimensions of figure in inches
+ """
+ # Width of figure (in pts)
+ fig_width_pt = width * fraction
+
+ # Convert from pt to inches
+ inches_per_pt = 1 / 72.27
+
+ # Golden ratio to set aesthetic figure height
+ # https://disq.us/p/2940ij3
+ golden_ratio = (5**.5 - 1) / 2
+
+ # Figure width in inches
+ fig_width_in = fig_width_pt * inches_per_pt
+ # Figure height in inches
+ fig_height_in = fig_width_in * golden_ratio
+
+ fig_dim = (fig_width_in, fig_height_in)
+
+ return fig_dim
+
+
+
+def format_func(value, tick_number):
+ # find number of multiples of pi/2
+ # N = int(np.round(2 * value / np.pi))
+ # if N == 0:
+ # return "0"
+ # elif N == 1:
+ # return r"$\pi/2$"
+ # elif N == -1:
+ # return r"$-\pi/2$"
+ # elif N == 2:
+ # return r"$\pi$"
+ # elif N % 2 > 0:
+ # return r"${0}\pi/2$".format(N)
+ # else:
+ # return r"${0}\pi$".format(N // 2)
+ ##find number of multiples of pi/2
+ N = int(np.round(4 * value / np.pi))
+ if N == 0:
+ return "0"
+ elif N == 1:
+ return r"$\pi/4$"
+ elif N == -1:
+ return r"$-\pi/4$"
+ elif N == 2:
+ return r"$\pi/2$"
+ elif N == -2:
+ return r"$-\pi/2$"
+ elif N % 2 > 0:
+ return r"${0}\pi/2$".format(N)
+ else:
+ return r"${0}\pi$".format(N // 2)
+
+
+
+def find_nearest(array, value):
+ array = np.asarray(array)
+ idx = (np.abs(array - value)).argmin()
+ return array[idx]
+
+
+def find_nearestIdx(array, value):
+ array = np.asarray(array)
+ idx = (np.abs(array - value)).argmin()
+ return idx
+
+
+
+def energy(a1,a2,q1,q2,q12,q3,b1,b2):
+
+
+ a = np.array([a1,a2])
+ b = np.array([b1,b2])
+ H = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+ A = np.array([[q1,1/2*q12], [1/2*q12,q2] ])
+
+
+ tmp = H.dot(a)
+
+ # print('H',H)
+ # print('A',A)
+ # print('b',b)
+ # print('a',a)
+ # print('tmp',tmp)
+
+ tmp = (1/2)*a.dot(tmp)
+ # print('tmp',tmp)
+
+ tmp2 = A.dot(b)
+ # print('tmp2',tmp2)
+ tmp2 = 2*a.dot(tmp2)
+
+ # print('tmp2',tmp2)
+ energy = tmp - tmp2
+ # print('energy',energy)
+
+
+ # energy_axial1.append(energy_1)
+
+ return energy
+
+
+
+# def energy(a1,a2,q1,q2,q12,q3,b1,b2):
+#
+#
+# b = np.array([b1,b2])
+# H = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+# A = np.array([[q1,1/2*q12], [1/2*q12,q2] ])
+#
+#
+# tmp = H.dot(a)
+#
+# print('H',H)
+# print('A',A)
+# print('b',b)
+# print('a',a)
+# print('tmp',tmp)
+#
+# tmp = (1/2)*a.dot(tmp)
+# print('tmp',tmp)
+#
+# tmp2 = A.dot(b)
+# print('tmp2',tmp2)
+# tmp2 = 2*a.dot(tmp2)
+#
+# print('tmp2',tmp2)
+# energy = tmp - tmp2
+# print('energy',energy)
+#
+#
+# # energy_axial1.append(energy_1)
+#
+# return energy
+#
+
+
+
+
+
+################################################################################################################
+################################################################################################################
+################################################################################################################
+
+InputFile = "/inputs/computeMuGamma.parset"
+OutputFile = "/outputs/outputMuGamma.txt"
+# --------- Run from src folder:
+path_parent = os.path.dirname(os.getcwd())
+os.chdir(path_parent)
+path = os.getcwd()
+print(path)
+InputFilePath = os.getcwd()+InputFile
+OutputFilePath = os.getcwd()+OutputFile
+print("InputFilepath: ", InputFilePath)
+print("OutputFilepath: ", OutputFilePath)
+print("Path: ", path)
+
+print('---- Input parameters: -----')
+
+# q1=1;
+# q2=2;
+# q12=1/2;
+# q3=((4*q1*q2)**0.5-q12)/2;
+# # H=[2*q1,q12+2*q3;q12+2*q3,2*q2];
+#
+# H = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+# A = np.array([[q1,1/2*q12], [1/2*q12,q2] ])
+# abar = np.array([q12+2*q3, 2*q2])
+# abar = (1.0/math.sqrt((q12+2*q3)**2+(2*q2)**2))*abar
+#
+# print('abar:',abar)
+#
+# b = np.linalg.lstsq(A, abar)[0]
+# print('b',b)
+#
+#
+# # print('abar:',np.shape(abar))
+# # print('np.transpose(abar):',np.shape(np.transpose(abar)))
+# sstar = (1/(q1+q2))*abar.dot(A.dot(b))
+# # sstar = (1/(q1+q2))*abar.dot(tmp)
+# print('sstar', sstar)
+# abarperp= np.array([abar[1],-abar[0]])
+# print('abarperp:',abarperp)
+
+
+# -------------------------- Input Parameters --------------------
+
+mu1 = 1.0
+rho1 = 1.0
+alpha = 5.0
+theta = 1.0/2
+# theta= 0.1
+beta = 5.0
+
+
+
+
+# mu1 = 1.0
+# rho1 = 1.0
+# alpha = -0.75
+# theta = 1.0/2
+# # theta= 0.1
+# beta = 5.0
+
+
+# mu1 = 1.0
+# rho1 = 1.0
+# alpha = 2.0
+# theta = 1.0/2
+# # theta= 0.1
+# beta = 5.0
+
+
+#Figure3:
+# mu1 = 1.0
+# rho1 = 1.0
+# alpha = 2.0
+# theta = 1.0/8
+# # theta= 0.1
+# beta = 2.0
+
+
+# alpha= -5
+
+
+#set gamma either to 1. '0' 2. 'infinity' or 3. a numerical positive value
+gamma = '0'
+# gamma = 'infinity'
+
+
+lambda1 = 0.0
+
+
+print('---- Input parameters: -----')
+print('mu1: ', mu1)
+print('rho1: ', rho1)
+# print('alpha: ', alpha)
+print('beta: ', beta)
+# print('theta: ', theta)
+print('gamma:', gamma)
+
+print('lambda1: ', lambda1)
+print('----------------------------')
+# ----------------------------------------------------------------
+print('----------------------------')
+
+# ----------------------------------------------------------------
+
+
+
+
+
+
+q1 = (1.0/6.0)*harmonicMean(mu1, beta, theta)
+q2 = (1.0/6.0)*arithmeticMean(mu1, beta, theta)
+q12 = 0.0
+q3 = GetMuGamma(beta, theta,gamma,mu1,rho1,InputFilePath ,OutputFilePath )
+b1 = prestrain_b1(rho1,beta, alpha, theta )
+b2 = prestrain_b2(rho1,beta, alpha, theta )
+
+
+## ---- 1-ParameterFamilyCase:
+# q1=1;
+# q2=2;
+# q12=1/2;
+# q3=((4*q1*q2)**0.5-q12)/2;
+# # H=[2*q1,q12+2*q3;q12+2*q3,2*q2];
+# H = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+# A = np.array([[q1,1/2*q12], [1/2*q12,q2] ])
+# abar = np.array([q12+2*q3, 2*q2])
+# abar = (1.0/math.sqrt((q12+2*q3)**2+(2*q2)**2))*abar
+# print('abar:',abar)
+# b = np.linalg.lstsq(A, abar)[0]
+# print('b',b)
+# b1=b[0]
+# b2=b[1]
+## ---------------
+
+
+
+
+
+########################################
+
+# 1-ParameterFamilyCase:
+
+q1=1;
+q2=2;
+q12=1/2;
+q3=((4*q1*q2)**0.5-q12)/2;
+# H=[2*q1,q12+2*q3;q12+2*q3,2*q2];
+
+H = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+A = np.array([[q1,1/2*q12], [1/2*q12,q2] ])
+abar = np.array([q12+2*q3, 2*q2])
+abar = (1.0/math.sqrt((q12+2*q3)**2+(2*q2)**2))*abar
+
+print('abar:',abar)
+
+b = np.linalg.lstsq(A, abar)[0]
+print('b',b)
+
+b1=b[0]
+b2=b[1]
+
+
+##----------------------
+print('q1 = ', q1)
+print('q2 = ', q2)
+print('q3 = ', q3)
+print('q12 = ', q12)
+print('b1 = ', b1)
+print('b2 = ', b2)
+##--------------
+
+
+# print('abar:',np.shape(abar))
+# print('np.transpose(abar):',np.shape(np.transpose(abar)))
+sstar = (1/(q1+q2))*abar.dot(A.dot(b))
+# sstar = (1/(q1+q2))*abar.dot(tmp)
+print('sstar', sstar)
+abarperp= np.array([abar[1],-abar[0]])
+print('abarperp:',abarperp)
+
+print('sstar*abar:', sstar*abar)
+# print('np.dot(sstar*abar):', np.dot(sstar*abar))
+print('----------------------------')
+
+
+N=1000;
+# N=10;
+scale_domain = 5
+
+translate_startpoint = -1.8
+
+T = np.linspace(-sstar*(q12+2*q3)/(2*q2), sstar*(2*q2)/(q12+2*q3), num=N)
+# T = np.linspace(-sstar*(q12+2*q3)/(2*q2)*scale_domain + translate_startpoint, sstar*(2*q2)/(q12+2*q3)*scale_domain , num=N)
+# T = np.linspace(-2,2, num=N)
+# print('T:', T)
+
+print('T.min():', T.min())
+print('T.max():', T.max())
+
+kappas = []
+alphas = []
+# G.append(float(s[0]))
+
+G_container = []
+abar_container = []
+
+test = sstar*abar
+
+
+abar_tmp = abar
+
+for t in T :
+ abar_current = sstar*abar+t*abarperp;
+ # abar_current[abar_current < 1e-10] = 0 # Projection onto x-y-axis!!
+ print('abar_current', abar_current)
+ G = [abar_current[0], abar_current[1] , (2*abar_current[0]*abar_current[1])**0.5 ]
+ G_container.append(G)
+ abar_container.append(abar_current)
+ e = [(abar_current[0]/(abar_current[0]+abar_current[1]))**0.5, (abar_current[1]/(abar_current[0]+abar_current[1]))**0.5]
+ kappa = abar_current[0]+abar_current[1]
+ alpha = math.atan2(e[1], e[0])
+ # print('angle current:', alpha)
+ kappas.append(kappa)
+ alphas.append(alpha)
+
+
+alphas = np.array(alphas)
+kappas = np.array(kappas)
+
+# print('G_container', G_container)
+G = np.array(G_container)
+abar = np.array(abar_container)
+
+print('G', G)
+print('abar', abar)
+print('abar.shape',abar.shape)
+
+
+
+
+
+
+
+
+
+
+######################################
+
+
+
+num_Points = 400
+num_Points = 200
+# num_Points = 20
+
+
+# Creating dataset
+x = np.linspace(-5,5,num_Points)
+y = np.linspace(-5,5,num_Points)
+
+x = np.linspace(-20,20,num_Points)
+y = np.linspace(-20,20,num_Points)
+
+
+x = np.linspace(-2,2,num_Points)
+y = np.linspace(-2,2,num_Points)
+
+# x = np.linspace(-10,10,num_Points)
+# y = np.linspace(-10,10,num_Points)
+
+# x = np.linspace(-60,60,num_Points)
+# y = np.linspace(-60,60,num_Points)
+#
+#
+# x = np.linspace(-40,40,num_Points)
+# y = np.linspace(-40,40,num_Points)
+
+
+a1, a2 = np.meshgrid(x,y)
+
+# geyser = sns.load_dataset("geyser")
+# print('type of geyser:', type(geyser))
+# print('geyser:',geyser)
+
+ContourRange=20
+
+x_in = np.linspace(-ContourRange,ContourRange,num_Points)
+y_in = np.linspace(-ContourRange,ContourRange,num_Points)
+a1_in, a2_in = np.meshgrid(x_in,y_in)
+
+print('a1:', a1)
+print('a2:',a2 )
+
+print('a1.shape', a1.shape)
+
+#-- FILTER OUT VALUES for G+ :
+
+# tmp1 = a1[np.where(a1*a2 >= 0)]
+# tmp2 = a2[np.where(a1*a2 >= 0)]
+#
+# np.take(a, np.where(a>100)[0], axis=0)
+# tmp1 = np.take(a1, np.where(a1*a2 >= 0)[0], axis=0)
+# tmp2 = np.take(a1, np.where(a1*a2 >= 0)[0], axis=0)
+# tmp2 = a2[np.where(a1*a2 >= 0)]
+
+tmp1 = a1[a1*a2 >= 0]
+tmp2 = a2[a1*a2 >= 0]
+tmp1 = tmp1.reshape(-1,5)
+tmp2 = tmp2.reshape(-1,5)
+
+
+# tmp1_pos = a1[np.where(a1*a2 >= 0) ]
+# tmp2_pos = a2[np.where(a1*a2 >= 0) ]
+# tmp1_pos = tmp1_pos[np.where(tmp1_pos >= 0)]
+# tmp2_pos = tmp2_pos[np.where(tmp2_pos >= 0)]
+#
+# tmp1_neg = a1[a1*a2 >= 0 ]
+# tmp2_neg = a2[a1*a2 >= 0 ]
+# tmp1_neg = tmp1_neg[tmp1_neg < 0]
+# tmp2_neg = tmp2_neg[tmp2_neg < 0]
+# a1 = tmp1
+# a2 = tmp2
+#
+# a1 = a1.reshape(-1,5)
+# a2 = a2.reshape(-1,5)
+#
+# tmp1_pos = tmp1_pos.reshape(-1,5)
+# tmp2_pos = tmp2_pos.reshape(-1,5)
+# tmp1_neg = tmp1_neg.reshape(-1,5)
+# tmp2_neg = tmp2_neg.reshape(-1,5)
+
+
+print('a1:', a1)
+print('a2:',a2 )
+print('a1.shape', a1.shape)
+
+
+
+
+
+energyVec = np.vectorize(energy)
+
+# Z = energyVec(np.array([a1,a2]),q1,q2,q12,q3,b1,b2)
+Z = energyVec(a1,a2,q1,q2,q12,q3,b1,b2)
+
+Z_in = energyVec(a1_in,a2_in,q1,q2,q12,q3,b1,b2)
+
+
+
+
+print('Z:', Z)
+
+print('any', np.any(Z<0))
+
+#
+
+
+# negZ_a1 = a1[np.where(Z<0)]
+# negZ_a2 = a2[np.where(Z<0)]
+# negativeValues = Z[np.where(Z<0)]
+# print('negativeValues:',negativeValues)
+#
+# print('negZ_a1',negZ_a1)
+# print('negZ_a2',negZ_a2)
+#
+#
+# negZ_a1 = negZ_a1.reshape(-1,5)
+# negZ_a2 = negZ_a2.reshape(-1,5)
+# negativeValues = negativeValues.reshape(-1,5)
+#
+# Z_pos = energyVec(tmp1_pos,tmp2_pos,q1,q2,q12,q3,b1,b2)
+# Z_neg = energyVec(tmp1_neg,tmp2_neg,q1,q2,q12,q3,b1,b2)
+
+
+
+
+
+# print('Test energy:' , energy(np.array([1,1]),q1,q2,q12,q3,b1,b2))
+
+
+
+
+# print('Z_pos.shape', Z_pos.shape)
+
+
+
+
+
+
+
+## -- PLOT :
+mpl.rcParams['text.usetex'] = True
+mpl.rcParams["font.family"] = "serif"
+mpl.rcParams["font.size"] = "9"
+
+label_size = 8
+mpl.rcParams['xtick.labelsize'] = label_size
+mpl.rcParams['ytick.labelsize'] = label_size
+
+plt.style.use('seaborn')
+# plt.style.use('seaborn-whitegrid')
+# sns.set()
+# plt.style.use('seaborn-whitegrid')
+
+label_size = 9
+mpl.rcParams['xtick.labelsize'] = label_size
+mpl.rcParams['ytick.labelsize'] = label_size
+
+width = 6.28 *0.5
+# width = 6.28 *0.33
+# width = 6.28
+height = width #/ 1.618
+
+# width = 452.9579/2
+# size= set_size(width, fraction=0.5)
+# print('set_size(width, fraction=0.5)', set_size(width, fraction=1))
+# print('size[0]',size[0])
+
+f_size = 10
+# fig= plt.figure()
+fig, ax = plt.subplots()
+# fig.set_size_inches(width, height)
+# fig.set_size_inches(set_size(width, fraction=0.5))
+# ax = plt.axes(projection ='3d', adjustable='box')
+# ax = plt.axes((0.17,0.21 ,0.75,0.75))
+
+# ax = plt.axes((0.17,0.23 ,0.7,0.7))
+# ax = plt.axes((0.17,0.23 ,1.0,1.0))
+# ax=plt.axes()
+# ax = plt.axes((0.15,0.18,0.8,0.8))
+# ax.tick_params(axis='x',which='major', direction='out',pad=5)
+# ax.tick_params(axis='y',which='major', length=3, width=1, direction='out',pad=3)
+# ax.xaxis.set_major_locator(MultipleLocator(0.1))
+# ax.xaxis.set_minor_locator(MultipleLocator(0.05))
+# ax.xaxis.set_major_locator(plt.MultipleLocator(np.pi / 8))
+# ax.xaxis.set_minor_locator(plt.MultipleLocator(np.pi / 16))
+# ax.xaxis.set_major_locator(plt.MultipleLocator(np.pi / 2))
+# ax.xaxis.set_minor_locator(plt.MultipleLocator(np.pi / 4))
+# ax.xaxis.set_major_formatter(plt.FuncFormatter(format_func))
+ax.grid(True,which='major',axis='both',alpha=0.3)
+
+# Substract constant:
+# c = (b1**2)*q1+b1*b2*q12+(b2**2)*q2
+# Z = Z-c
+#
+# print('Value of c:', c)
+
+
+
+print('Z.min()', Z.min())
+print('Z.max()', Z.max())
+norm=mcolors.Normalize(Z.min(),Z.max())
+# facecolors=cm.brg(norm)
+
+
+
+
+cmap=mpl.cm.RdBu_r
+cmap=mpl.cm.viridis_r
+# cmap=mpl.cm.bwr
+cmap=mpl.cm.coolwarm
+# cmap=mpl.cm.gnuplot
+cmap=mpl.cm.magma_r
+# cmap=mpl.cm.inferno_r
+# cmap=mpl.cm.plasma
+# cmap=mpl.cm.plasma_r
+# cmap=mpl.cm.cividis_r
+# cmap = mpl.colors.LinearSegmentedColormap.from_list("", ["blue","violet","red"])
+# cmap = mpl.colors.LinearSegmentedColormap.from_list("", ["blue","orange"])
+
+# cmap = mpl.colors.LinearSegmentedColormap.from_list("", [(0,"red"), (.1,"violet"), (.5, "blue"), (1.0, "green")])
+# make a colormap that has land and ocean clearly delineated and of the
+# same length (256 + 256)
+#
+# colors_undersea = plt.cm.terrain(np.linspace(0, 0.17, 256))
+# colors_land = plt.cm.terrain(np.linspace(0.25, 1, 256))
+# all_colors = np.vstack((colors_undersea, colors_land))
+# # cmap = mcolors.LinearSegmentedColormap.from_list(
+# # 'terrain_map', all_colors)
+
+
+# cmap = px.colors.sequential.agsunset
+# cmap = plotly.colors.PLOTLY_SCALES["Viridis"]
+
+
+
+
+# cmap = cm.brg(Z)
+divnorm=mcolors.TwoSlopeNorm(vmin=Z.min(), vcenter=0., vmax=Z.max())
+divnorm=mcolors.TwoSlopeNorm(vmin=Z.min(), vcenter=(Z.max()+Z.min())/2, vmax=Z.max())
+# divnorm=mcolors.TwoSlopeNorm(vmin=-500, vcenter=0, vmax=Z.max())
+
+# divnorm=mcolors.TwoSlopeNorm(vmin=-10, vcenter=0. ,vmax=10)
+# divnorm=mcolors.TwoSlopeNorm(vmin=-10, vcenter=0., vmax=Z.max())
+
+# divnorm=mcolors.LogNorm(vmin=Z.min(), vmax=Z.max()) #Test LogNorm
+
+# cmap = cm.brg(divnorm(Z))
+
+# ax.imshow(Z, extent=[-20, 20, -20, 20],origin='lower', norm = norm,
+# cmap='coolwarm', alpha=0.6)
+
+# ax.imshow(Z, extent=[-20, 20, -20, 20],origin='lower',
+# cmap='coolwarm', alpha=0.6)
+# ax.imshow(Z, extent=[-20, 20, -20, 20],origin='lower',
+# cmap=cmap, alpha=0.6)
+
+# divnorm=mcolors.TwoSlopeNorm(vmin=Z.min(), vcenter=0., vmax=Z.max())
+# plt.imshow(Z, extent=[x.min(), x.max(), y.min(), y.max()],origin='lower',
+# cmap=cmap, alpha=0.6)
+
+# I = plt.imshow(Z, extent=[x.min(), x.max(), y.min(), y.max()],origin='lower', norm = divnorm,
+# cmap=cmap, alpha=0.6)
+# plt.imshow(Z, extent=[x.min(), x.max(), y.min(), y.max()],origin='lower', norm = divnorm,
+# cmap=cmap, alpha=0.9)
+# plt.imshow(Z, extent=[x.min(), x.max(), y.min(), y.max()],origin='lower', norm = divnorm,
+# cmap=cmap, alpha=0.6)
+
+
+# I = plt.imshow(Z, extent=[x.min(), x.max(), y.min(), y.max()],origin='lower',
+ # cmap=cmap, alpha=0.6)
+
+
+# I = plt.imshow(Z, extent=[x.min(), x.max(), y.min(), y.max()],origin='lower', norm = mcolors.CenteredNorm(),
+# cmap=cmap, alpha=0.6)
+
+
+
+# COLORBAR :
+# cbar = plt.colorbar()
+# cbar.ax.tick_params(labelsize=f_size)
+# fig.colorbar(I)
+
+
+
+##----- ADD RECTANGLE TO COVER QUADRANT :
+# epsilon = 0.4
+epsilon = 0.001
+# ax.axvspan(0, x.max(), y.min(), 0, alpha=1, color='yellow', zorder=5)#yellow
+# ax.fill_between([0, x.max()], y.min(), 0, alpha=0.3, color='yellow', zorder=5)#yellow
+# ax.fill_between([x.min(), 0], 0, y.max(), alpha=0.3, color='yellow', zorder=5)#yellow
+
+fillcolor = 'royalblue'
+# ax.fill_between([0+epsilon, x.max()], y.min(), 0-epsilon, alpha=0.7, color=fillcolor, zorder=4)#yellow
+# ax.fill_between([x.min(), 0-epsilon], 0+epsilon, y.max(), alpha=0.7, color=fillcolor, zorder=4)#yellow
+# ax.fill_between([0+epsilon, x.max()], y.min(), 0-epsilon, alpha=1.0, color=fillcolor, zorder=4)#yellow
+# ax.fill_between([x.min(), 0-epsilon], 0+epsilon, y.max(), alpha=1.0, color=fillcolor, zorder=4)#yellow
+
+
+## FILL
+ax.fill_between([x.min(), 0-epsilon], y.min(), 0-epsilon, alpha=.25, color=fillcolor, zorder=4)#yellow
+ax.fill_between([0+epsilon, x.max()], 0+epsilon, y.max(), alpha=.25, color=fillcolor, zorder=4)#yellow
+
+
+ax.text(1,1, r"$\mathcal{G}^+_{\mathbf{R}^2}$", color='royalblue', size=15)
+
+# ax.text(0.25,0.25, r"$\mathcal{S}$", color='darkorange', size=15)
+
+# PLOT 1-PARAMETER FAMILY
+
+print('abar:', abar)
+print('abar[0,:]:', abar[0,:])
+print('abar[1,:]:', abar[1,:])
+
+line = ax.plot(abar[:,0],abar[:,1], linewidth=2, color='darkorange', linestyle='-', zorder=4)
+
+# plt.arrow(x=1, y=0, dx=0.5, dy=0, )
+# ax.arrow(1, 0, 0.5, 0, head_width=0.05, head_length=0.1, fc='k', ec='k', zorder=5)
+# plt.arrow(1, 0, 0.8, 0, shape='full', lw=0, length_includes_head=True, head_width=.15, zorder=5, color='purple')
+
+
+## PLOT ARROW:
+# plt.arrow(1, 0, 0.5, 0, shape='full', lw=0, length_includes_head=True, head_width=.20, zorder=5, color='darkorange')
+# plt.arrow(0, 1.8, 0, -0.8, shape='full', lw=0, length_includes_head=True, head_width=.20, zorder=5, color='darkorange')
+
+
+# plt.arrow(0, 1.8, 0, -0.8, lw=0, head_width=.12, zorder=5, color='darkorange')
+# plt.arrow(0, 2, 0, -0.5, shape='full', lw=0, length_includes_head=True, head_width=.12, zorder=5, color='darkorange')
+# add_arrow(line, color='darkorange')
+
+
+
+
+# ax.plot_surface(a1,a2, Z, cmap=cm.coolwarm,
+# linewidth=0, antialiased=False)
+
+
+
+# ax.plot(theta_rho, energy_axial1, 'royalblue', zorder=3, label=r"axialMin1")
+# ax.plot(theta_rho, energy_axial2, 'forestgreen', zorder=3, label=r"axialMin2")
+# ax.plot(-1.0*alphas, kappas, 'red', zorder=3, )
+
+
+# print('test:',test)
+# ax.scatter(test[0],test[1])
+# ax.arrow(test[0],test[1],abarperp[0],abarperp[1])
+
+# lg = ax.legend(bbox_to_anchor=(0.0, 0.75), loc='upper left')
+
+
+
+### PLot x and y- Axes
+ax.plot(ax.get_xlim(),[0,0],'k--', linewidth=0.5)
+ax.plot([0,0],ax.get_ylim(), 'k--', linewidth=0.5)
+
+
+
+ax.set_xlabel(r"$a_1$", fontsize=f_size ,labelpad=0)
+ax.set_ylabel(r"$a_2$", fontsize=f_size ,labelpad=0)
+# ax.set_ylabel(r"energy")
+ax.tick_params(axis='both', which='major', labelsize=f_size)
+ax.tick_params(axis='both', which='minor', labelsize=f_size)
+
+
+
+# ax.set_xticks([-np.pi/2, -np.pi/4 ,0, np.pi/4, np.pi/2 ])
+# labels = ['$0$',r'$\pi/8$', r'$\pi/4$' ,r'$3\pi/8$' , r'$\pi/2$']
+# ax.set_yticklabels(labels)
+
+print('x.max()',x.max())
+print('y.max()',y.max())
+ax.set_xlim(x.min(),x.max())
+ax.set_xlim(y.min(),y.max())
+
+
+
+# ax.legend(loc='upper right')
+
+
+
+fig.set_size_inches(width, height)
+# fig.set_size_inches(set_size(width, fraction=0.33))
+fig.savefig('Energy_ContourG+_Flat.pdf')
+
+plt.show()
+
+
+#
+#
+#
+# # Curve parametrised by \theta_rho = alpha in parameter space
+# N=100;
+# theta_rho = np.linspace(1, 3, num=N)
+# print('theta_rho:', theta_rho)
+#
+#
+# theta_values = []
+#
+#
+# for t in theta_rho:
+#
+# s = (1.0/10.0)*t+0.1
+# theta_values.append(s)
+#
+#
+#
+#
+#
+# theta_rho = np.array(theta_rho)
+# theta_values = np.array(theta_values)
+#
+# betas_ = 2.0
+#
+
+# alphas, betas, thetas = np.meshgrid(theta_rho, betas_, theta_values, indexing='ij')
+#
+#
+# harmonicMeanVec = np.vectorize(harmonicMean)
+# arithmeticMeanVec = np.vectorize(arithmeticMean)
+# prestrain_b1Vec = np.vectorize(prestrain_b1)
+# prestrain_b2Vec = np.vectorize(prestrain_b2)
+#
+# GetMuGammaVec = np.vectorize(GetMuGamma)
+# muGammas = GetMuGammaVec(betas,thetas,gamma,mu1,rho1,InputFilePath ,OutputFilePath )
+#
+# q1_vec = harmonicMeanVec(mu1, betas, thetas)
+# q2_vec = arithmeticMeanVec(mu1, betas, thetas)
+#
+# b1_vec = prestrain_b1Vec(rho1, betas, alphas, thetas)
+# b2_vec = prestrain_b2Vec(rho1, betas, alphas, thetas)
+
+# special case: q12 == 0!! .. braucht eigentlich nur b1 & b2 ...
+
+# print('type b1_values:', type(b1_values))
+
+
+
+# print('size(q1)',q1.shape)
+#
+#
+# energy_axial1 = []
+# energy_axial2 = []
+#
+# # for b1 in b1_values:
+# for i in range(len(theta_rho)):
+# print('index i:', i)
+#
+# print('theta_rho[i]',theta_rho[i])
+# print('theta_values[i]',theta_values[i])
+#
+# q1 = (1.0/6.0)*harmonicMean(mu1, beta, theta_values[i])
+# q2 = (1.0/6.0)*arithmeticMean(mu1, beta, theta_values[i])
+# q12 = 0.0
+# q3 = GetMuGamma(beta, theta_values[i],gamma,mu1,rho1,InputFilePath ,OutputFilePath )
+# b1 = prestrain_b1(rho1,beta, theta_rho[i],theta_values[i] )
+# b2 = prestrain_b2(rho1,beta, theta_rho[i],theta_values[i] )
+#
+#
+# # q2_vec = arithmeticMean(mu1, betas, thetas)
+# #
+# # b1_vec = prestrain_b1Vec(rho1, betas, alphas, thetas)
+# # b2_vec = prestrain_b2Vec(rho1, betas, alphas, thetas)
+# print('q1[i]',q1)
+# print('q2[i]',q2)
+# print('q3[i]',q3)
+# print('b1[i]',b1)
+# print('b2[i]',b2)
+# # print('q1[i]',q1[0][i])
+# # print('q2[i]',q2[i])
+# # print('b1[i]',b1[i])
+# # print('b2[i]',b2[i])
+# #compute axial energy #1 ...
+#
+# a_axial1 = np.array([b1,0])
+# a_axial2 = np.array([0,b2])
+# b = np.array([b1,b2])
+#
+# H = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+# A = np.array([[q1,1/2*q12], [1/2*q12,q2] ])
+#
+#
+# tmp = H.dot(a_axial1)
+#
+# print('H',H)
+# print('A',A)
+# print('b',b)
+# print('a_axial1',a_axial1)
+# print('tmp',tmp)
+#
+# tmp = (1/2)*a_axial1.dot(tmp)
+# print('tmp',tmp)
+#
+# tmp2 = A.dot(b)
+# print('tmp2',tmp2)
+# tmp2 = 2*a_axial1.dot(tmp2)
+#
+# print('tmp2',tmp2)
+# energy_1 = tmp - tmp2
+# print('energy_1',energy_1)
+#
+#
+# energy_axial1.append(energy_1)
+#
+#
+# tmp = H.dot(a_axial2)
+#
+# print('H',H)
+# print('A',A)
+# print('b',b)
+# print('a_axial2',a_axial2)
+# print('tmp',tmp)
+#
+# tmp = (1/2)*a_axial2.dot(tmp)
+# print('tmp',tmp)
+#
+# tmp2 = A.dot(b)
+# print('tmp2',tmp2)
+# tmp2 = 2*a_axial2.dot(tmp2)
+#
+# print('tmp2',tmp2)
+# energy_2 = tmp - tmp2
+# print('energy_2',energy_2)
+#
+#
+# energy_axial2.append(energy_2)
+#
+#
+#
+#
+#
+# print('theta_values', theta_values)
+#
+#
+#
+
+
+#
+#
+#
+#
+# kappas = []
+# alphas = []
+# # G.append(float(s[0]))
+#
+#
+#
+#
+# for t in T :
+#
+# abar_current = sstar*abar+t*abarperp;
+# # print('abar_current', abar_current)
+# abar_current[abar_current < 1e-10] = 0
+# # print('abar_current', abar_current)
+#
+# # G = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+# G = [abar_current[0], abar_current[1] , (2*abar_current[0]*abar_current[1])**0.5 ]
+#
+# e = [(abar_current[0]/(abar_current[0]+abar_current[1]))**0.5, (abar_current[1]/(abar_current[0]+abar_current[1]))**0.5]
+# kappa = abar_current[0]+abar_current[1]
+# alpha = math.atan2(e[1], e[0])
+#
+# print('angle current:', alpha)
+#
+# kappas.append(kappa)
+# alphas.append(alpha)
+#
+#
+#
+# alphas = np.array(alphas)
+# kappas = np.array(kappas)
+#
+#
+# print('kappas:',kappas)
+# print('alphas:',alphas)
+# print('min alpha:', min(alphas))
+# print('min kappa:', min(kappas))
+#
+# mpl.rcParams['text.usetex'] = True
+# mpl.rcParams["font.family"] = "serif"
+# mpl.rcParams["font.size"] = "9"
+# width = 6.28 *0.5
+# height = width / 1.618
+# fig = plt.figure()
+# # ax = plt.axes((0.15,0.21 ,0.75,0.75))
+# ax = plt.axes((0.15,0.21 ,0.8,0.75))
+# ax.tick_params(axis='x',which='major', direction='out',pad=5)
+# ax.tick_params(axis='y',which='major', length=3, width=1, direction='out',pad=3)
+# # ax.xaxis.set_major_locator(MultipleLocator(0.1))
+# # ax.xaxis.set_minor_locator(MultipleLocator(0.05))
+# # ax.xaxis.set_major_locator(plt.MultipleLocator(np.pi / 8))
+# # ax.xaxis.set_minor_locator(plt.MultipleLocator(np.pi / 16))
+# ax.xaxis.set_major_locator(plt.MultipleLocator(np.pi / 2))
+# ax.xaxis.set_minor_locator(plt.MultipleLocator(np.pi / 4))
+# ax.xaxis.set_major_formatter(plt.FuncFormatter(format_func))
+# ax.grid(True,which='major',axis='both',alpha=0.3)
+#
+#
+#
+#
+# ax.plot(alphas, kappas, 'royalblue', zorder=3, )
+# ax.plot(-1.0*alphas, kappas, 'red', zorder=3, )
diff --git a/src/1-ParameterFamily_G+_Flat_v2.py b/src/1-ParameterFamily_G+_Flat_v2.py
new file mode 100644
index 0000000000000000000000000000000000000000..3f9775cef627b1d22527a364ae288d1445446f71
--- /dev/null
+++ b/src/1-ParameterFamily_G+_Flat_v2.py
@@ -0,0 +1,1121 @@
+import numpy as np
+import matplotlib.pyplot as plt
+import sympy as sym
+import math
+import os
+import subprocess
+import fileinput
+import re
+import matlab.engine
+import sys
+from ClassifyMin import *
+from HelperFunctions import *
+# from CellScript import *
+from mpl_toolkits.mplot3d import Axes3D
+import matplotlib.cm as cm
+from vtk.util import numpy_support
+from pyevtk.hl import gridToVTK
+import time
+import matplotlib.ticker as ticker
+
+import matplotlib as mpl
+from matplotlib.ticker import MultipleLocator,FormatStrFormatter,MaxNLocator
+import pandas as pd
+
+import seaborn as sns
+import matplotlib.colors as mcolors
+
+from chart_studio import plotly
+import plotly.graph_objs as go
+import plotly.express as px
+import plotly.colors
+# from matplotlib import rc
+# rc('text', usetex=True) # Use LaTeX font
+#
+# import seaborn as sns
+# sns.set(color_codes=True)
+
+
+def show(fig):
+ import io
+ import plotly.io as pio
+ from PIL import Image
+ buf = io.BytesIO()
+ pio.write_image(fig, buf)
+ img = Image.open(buf)
+ img.show()
+
+
+
+
+def add_arrow(line, position=None, direction='right', size=15, color=None):
+ """
+ add an arrow to a line.
+
+ line: Line2D object
+ position: x-position of the arrow. If None, mean of xdata is taken
+ direction: 'left' or 'right'
+ size: size of the arrow in fontsize points
+ color: if None, line color is taken.
+ """
+ if color is None:
+ color = line.get_color()
+
+ xdata = line.get_xdata()
+ ydata = line.get_ydata()
+
+ if position is None:
+ position = xdata.mean()
+ # find closest index
+ start_ind = np.argmin(np.absolute(xdata - position))
+ if direction == 'right':
+ end_ind = start_ind + 1
+ else:
+ end_ind = start_ind - 1
+
+ line.axes.annotate('',
+ xytext=(xdata[start_ind], ydata[start_ind]),
+ xy=(xdata[end_ind], ydata[end_ind]),
+ arrowprops=dict(arrowstyle="->", color=color),
+ size=size
+ )
+
+
+# set the colormap and centre the colorbar
+class MidpointNormalize(mcolors.Normalize):
+ """
+ Normalise the colorbar so that diverging bars work there way either side from a prescribed midpoint value)
+
+ e.g. im=ax1.imshow(array, norm=MidpointNormalize(midpoint=0.,vmin=-100, vmax=100))
+ """
+ def __init__(self, vmin=None, vmax=None, midpoint=None, clip=False):
+ self.midpoint = midpoint
+ mcolors.Normalize.__init__(self, vmin, vmax, clip)
+
+ def __call__(self, value, clip=None):
+ # I'm ignoring masked values and all kinds of edge cases to make a
+ # simple example...
+ x, y = [self.vmin, self.midpoint, self.vmax], [0, 0.5, 1]
+ return np.ma.masked_array(np.interp(value, x, y), np.isnan(value))
+
+
+
+def set_size(width, fraction=1):
+ """Set figure dimensions to avoid scaling in LaTeX.
+
+ Parameters
+ ----------
+ width: float
+ Document textwidth or columnwidth in pts
+ fraction: float, optional
+ Fraction of the width which you wish the figure to occupy
+
+ Returns
+ -------
+ fig_dim: tuple
+ Dimensions of figure in inches
+ """
+ # Width of figure (in pts)
+ fig_width_pt = width * fraction
+
+ # Convert from pt to inches
+ inches_per_pt = 1 / 72.27
+
+ # Golden ratio to set aesthetic figure height
+ # https://disq.us/p/2940ij3
+ golden_ratio = (5**.5 - 1) / 2
+
+ # Figure width in inches
+ fig_width_in = fig_width_pt * inches_per_pt
+ # Figure height in inches
+ fig_height_in = fig_width_in * golden_ratio
+
+ fig_dim = (fig_width_in, fig_height_in)
+
+ return fig_dim
+
+
+
+def format_func(value, tick_number):
+ # find number of multiples of pi/2
+ # N = int(np.round(2 * value / np.pi))
+ # if N == 0:
+ # return "0"
+ # elif N == 1:
+ # return r"$\pi/2$"
+ # elif N == -1:
+ # return r"$-\pi/2$"
+ # elif N == 2:
+ # return r"$\pi$"
+ # elif N % 2 > 0:
+ # return r"${0}\pi/2$".format(N)
+ # else:
+ # return r"${0}\pi$".format(N // 2)
+ ##find number of multiples of pi/2
+ N = int(np.round(4 * value / np.pi))
+ if N == 0:
+ return "0"
+ elif N == 1:
+ return r"$\pi/4$"
+ elif N == -1:
+ return r"$-\pi/4$"
+ elif N == 2:
+ return r"$\pi/2$"
+ elif N == -2:
+ return r"$-\pi/2$"
+ elif N % 2 > 0:
+ return r"${0}\pi/2$".format(N)
+ else:
+ return r"${0}\pi$".format(N // 2)
+
+
+
+def find_nearest(array, value):
+ array = np.asarray(array)
+ idx = (np.abs(array - value)).argmin()
+ return array[idx]
+
+
+def find_nearestIdx(array, value):
+ array = np.asarray(array)
+ idx = (np.abs(array - value)).argmin()
+ return idx
+
+
+
+def energy(a1,a2,q1,q2,q12,q3,b1,b2):
+
+
+ a = np.array([a1,a2])
+ b = np.array([b1,b2])
+ H = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+ A = np.array([[q1,1/2*q12], [1/2*q12,q2] ])
+
+
+ tmp = H.dot(a)
+
+ # print('H',H)
+ # print('A',A)
+ # print('b',b)
+ # print('a',a)
+ # print('tmp',tmp)
+
+ tmp = (1/2)*a.dot(tmp)
+ # print('tmp',tmp)
+
+ tmp2 = A.dot(b)
+ # print('tmp2',tmp2)
+ tmp2 = 2*a.dot(tmp2)
+
+ # print('tmp2',tmp2)
+ energy = tmp - tmp2
+ # print('energy',energy)
+
+
+ # energy_axial1.append(energy_1)
+
+ return energy
+
+
+
+# def energy(a1,a2,q1,q2,q12,q3,b1,b2):
+#
+#
+# b = np.array([b1,b2])
+# H = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+# A = np.array([[q1,1/2*q12], [1/2*q12,q2] ])
+#
+#
+# tmp = H.dot(a)
+#
+# print('H',H)
+# print('A',A)
+# print('b',b)
+# print('a',a)
+# print('tmp',tmp)
+#
+# tmp = (1/2)*a.dot(tmp)
+# print('tmp',tmp)
+#
+# tmp2 = A.dot(b)
+# print('tmp2',tmp2)
+# tmp2 = 2*a.dot(tmp2)
+#
+# print('tmp2',tmp2)
+# energy = tmp - tmp2
+# print('energy',energy)
+#
+#
+# # energy_axial1.append(energy_1)
+#
+# return energy
+#
+
+
+
+
+
+################################################################################################################
+################################################################################################################
+################################################################################################################
+
+InputFile = "/inputs/computeMuGamma.parset"
+OutputFile = "/outputs/outputMuGamma.txt"
+# --------- Run from src folder:
+path_parent = os.path.dirname(os.getcwd())
+os.chdir(path_parent)
+path = os.getcwd()
+print(path)
+InputFilePath = os.getcwd()+InputFile
+OutputFilePath = os.getcwd()+OutputFile
+print("InputFilepath: ", InputFilePath)
+print("OutputFilepath: ", OutputFilePath)
+print("Path: ", path)
+
+print('---- Input parameters: -----')
+
+# q1=1;
+# q2=2;
+# q12=1/2;
+# q3=((4*q1*q2)**0.5-q12)/2;
+# # H=[2*q1,q12+2*q3;q12+2*q3,2*q2];
+#
+# H = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+# A = np.array([[q1,1/2*q12], [1/2*q12,q2] ])
+# abar = np.array([q12+2*q3, 2*q2])
+# abar = (1.0/math.sqrt((q12+2*q3)**2+(2*q2)**2))*abar
+#
+# print('abar:',abar)
+#
+# b = np.linalg.lstsq(A, abar)[0]
+# print('b',b)
+#
+#
+# # print('abar:',np.shape(abar))
+# # print('np.transpose(abar):',np.shape(np.transpose(abar)))
+# sstar = (1/(q1+q2))*abar.dot(A.dot(b))
+# # sstar = (1/(q1+q2))*abar.dot(tmp)
+# print('sstar', sstar)
+# abarperp= np.array([abar[1],-abar[0]])
+# print('abarperp:',abarperp)
+
+
+# -------------------------- Input Parameters --------------------
+
+mu1 = 1.0
+rho1 = 1.0
+alpha = 5.0
+theta = 1.0/2
+# theta= 0.1
+beta = 5.0
+
+
+
+
+# mu1 = 1.0
+# rho1 = 1.0
+# alpha = -0.75
+# theta = 1.0/2
+# # theta= 0.1
+# beta = 5.0
+
+
+# mu1 = 1.0
+# rho1 = 1.0
+# alpha = 2.0
+# theta = 1.0/2
+# # theta= 0.1
+# beta = 5.0
+
+
+#Figure3:
+# mu1 = 1.0
+# rho1 = 1.0
+# alpha = 2.0
+# theta = 1.0/8
+# # theta= 0.1
+# beta = 2.0
+
+
+# alpha= -5
+
+
+#set gamma either to 1. '0' 2. 'infinity' or 3. a numerical positive value
+gamma = '0'
+# gamma = 'infinity'
+
+
+lambda1 = 0.0
+
+
+print('---- Input parameters: -----')
+print('mu1: ', mu1)
+print('rho1: ', rho1)
+# print('alpha: ', alpha)
+print('beta: ', beta)
+# print('theta: ', theta)
+print('gamma:', gamma)
+
+print('lambda1: ', lambda1)
+print('----------------------------')
+# ----------------------------------------------------------------
+print('----------------------------')
+
+# ----------------------------------------------------------------
+
+
+
+
+
+
+q1 = (1.0/6.0)*harmonicMean(mu1, beta, theta)
+q2 = (1.0/6.0)*arithmeticMean(mu1, beta, theta)
+q12 = 0.0
+q3 = GetMuGamma(beta, theta,gamma,mu1,rho1,InputFilePath ,OutputFilePath )
+b1 = prestrain_b1(rho1,beta, alpha, theta )
+b2 = prestrain_b2(rho1,beta, alpha, theta )
+
+
+## ---- 1-ParameterFamilyCase:
+# q1=1;
+# q2=2;
+# q12=1/2;
+# q3=((4*q1*q2)**0.5-q12)/2;
+# # H=[2*q1,q12+2*q3;q12+2*q3,2*q2];
+# H = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+# A = np.array([[q1,1/2*q12], [1/2*q12,q2] ])
+# abar = np.array([q12+2*q3, 2*q2])
+# abar = (1.0/math.sqrt((q12+2*q3)**2+(2*q2)**2))*abar
+# print('abar:',abar)
+# b = np.linalg.lstsq(A, abar)[0]
+# print('b',b)
+# b1=b[0]
+# b2=b[1]
+## ---------------
+
+
+
+
+
+########################################
+
+# 1-ParameterFamilyCase:
+
+q1=1;
+q2=2;
+q12=1/2;
+q3=((4*q1*q2)**0.5-q12)/2;
+# H=[2*q1,q12+2*q3;q12+2*q3,2*q2];
+
+H = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+A = np.array([[q1,1/2*q12], [1/2*q12,q2] ])
+abar = np.array([q12+2*q3, 2*q2])
+abar = (1.0/math.sqrt((q12+2*q3)**2+(2*q2)**2))*abar
+
+print('abar:',abar)
+
+b = np.linalg.lstsq(A, abar)[0]
+print('b',b)
+
+b1=b[0]
+b2=b[1]
+
+
+##----------------------
+print('q1 = ', q1)
+print('q2 = ', q2)
+print('q3 = ', q3)
+print('q12 = ', q12)
+print('b1 = ', b1)
+print('b2 = ', b2)
+##--------------
+
+
+# print('abar:',np.shape(abar))
+# print('np.transpose(abar):',np.shape(np.transpose(abar)))
+sstar = (1/(q1+q2))*abar.dot(A.dot(b))
+# sstar = (1/(q1+q2))*abar.dot(tmp)
+print('sstar', sstar)
+abarperp= np.array([abar[1],-abar[0]])
+print('abarperp:',abarperp)
+
+print('sstar*abar:', sstar*abar)
+# print('np.dot(sstar*abar):', np.dot(sstar*abar))
+print('----------------------------')
+
+
+N=1000;
+N=10;
+scale_domain = 5
+translate_startpoint = -1.8
+T_line = np.linspace(-sstar*(q12+2*q3)/(2*q2)*scale_domain + translate_startpoint, sstar*(2*q2)/(q12+2*q3)*scale_domain , num=N)
+line_values = []
+for t in T_line :
+ print('sstar*abar+t*abarperp', sstar*abar+t*abarperp)
+ line_values.append(sstar*abar+t*abarperp)
+
+
+
+
+T = np.linspace(-sstar*(q12+2*q3)/(2*q2), sstar*(2*q2)/(q12+2*q3), num=N)
+
+# T = np.linspace(-2,2, num=N)
+# print('T:', T)
+
+print('T.min():', T.min())
+print('T.max():', T.max())
+
+kappas = []
+alphas = []
+# G.append(float(s[0]))
+
+G_container = []
+abar_container = []
+
+test = sstar*abar
+
+
+abar_tmp = abar
+
+for t in T :
+ abar_current = sstar*abar+t*abarperp;
+ abar_current[abar_current < 1e-10] = 0 # Projection onto x-y-axis!!
+ print('abar_current', abar_current)
+ G = [abar_current[0], abar_current[1] , (2*abar_current[0]*abar_current[1])**0.5 ]
+ G_container.append(G)
+ abar_container.append(abar_current)
+ e = [(abar_current[0]/(abar_current[0]+abar_current[1]))**0.5, (abar_current[1]/(abar_current[0]+abar_current[1]))**0.5]
+ kappa = abar_current[0]+abar_current[1]
+ alpha = math.atan2(e[1], e[0])
+ # print('angle current:', alpha)
+ kappas.append(kappa)
+ alphas.append(alpha)
+
+
+alphas = np.array(alphas)
+kappas = np.array(kappas)
+
+# print('G_container', G_container)
+G = np.array(G_container)
+abar = np.array(abar_container)
+
+print('G', G)
+print('abar', abar)
+print('abar.shape',abar.shape)
+
+
+
+
+
+
+
+
+
+
+######################################
+
+
+
+num_Points = 400
+num_Points = 200
+# num_Points = 20
+
+
+# Creating dataset
+x = np.linspace(-5,5,num_Points)
+y = np.linspace(-5,5,num_Points)
+
+x = np.linspace(-20,20,num_Points)
+y = np.linspace(-20,20,num_Points)
+
+
+x = np.linspace(-2,2,num_Points)
+y = np.linspace(-2,2,num_Points)
+
+# x = np.linspace(-10,10,num_Points)
+# y = np.linspace(-10,10,num_Points)
+
+# x = np.linspace(-60,60,num_Points)
+# y = np.linspace(-60,60,num_Points)
+#
+#
+# x = np.linspace(-40,40,num_Points)
+# y = np.linspace(-40,40,num_Points)
+
+
+a1, a2 = np.meshgrid(x,y)
+
+# geyser = sns.load_dataset("geyser")
+# print('type of geyser:', type(geyser))
+# print('geyser:',geyser)
+
+ContourRange=20
+
+x_in = np.linspace(-ContourRange,ContourRange,num_Points)
+y_in = np.linspace(-ContourRange,ContourRange,num_Points)
+a1_in, a2_in = np.meshgrid(x_in,y_in)
+
+print('a1:', a1)
+print('a2:',a2 )
+
+print('a1.shape', a1.shape)
+
+#-- FILTER OUT VALUES for G+ :
+
+# tmp1 = a1[np.where(a1*a2 >= 0)]
+# tmp2 = a2[np.where(a1*a2 >= 0)]
+#
+# np.take(a, np.where(a>100)[0], axis=0)
+# tmp1 = np.take(a1, np.where(a1*a2 >= 0)[0], axis=0)
+# tmp2 = np.take(a1, np.where(a1*a2 >= 0)[0], axis=0)
+# tmp2 = a2[np.where(a1*a2 >= 0)]
+
+tmp1 = a1[a1*a2 >= 0]
+tmp2 = a2[a1*a2 >= 0]
+tmp1 = tmp1.reshape(-1,5)
+tmp2 = tmp2.reshape(-1,5)
+
+
+# tmp1_pos = a1[np.where(a1*a2 >= 0) ]
+# tmp2_pos = a2[np.where(a1*a2 >= 0) ]
+# tmp1_pos = tmp1_pos[np.where(tmp1_pos >= 0)]
+# tmp2_pos = tmp2_pos[np.where(tmp2_pos >= 0)]
+#
+# tmp1_neg = a1[a1*a2 >= 0 ]
+# tmp2_neg = a2[a1*a2 >= 0 ]
+# tmp1_neg = tmp1_neg[tmp1_neg < 0]
+# tmp2_neg = tmp2_neg[tmp2_neg < 0]
+# a1 = tmp1
+# a2 = tmp2
+#
+# a1 = a1.reshape(-1,5)
+# a2 = a2.reshape(-1,5)
+#
+# tmp1_pos = tmp1_pos.reshape(-1,5)
+# tmp2_pos = tmp2_pos.reshape(-1,5)
+# tmp1_neg = tmp1_neg.reshape(-1,5)
+# tmp2_neg = tmp2_neg.reshape(-1,5)
+
+
+print('a1:', a1)
+print('a2:',a2 )
+print('a1.shape', a1.shape)
+
+
+
+
+
+energyVec = np.vectorize(energy)
+
+# Z = energyVec(np.array([a1,a2]),q1,q2,q12,q3,b1,b2)
+Z = energyVec(a1,a2,q1,q2,q12,q3,b1,b2)
+
+Z_in = energyVec(a1_in,a2_in,q1,q2,q12,q3,b1,b2)
+
+
+
+
+print('Z:', Z)
+
+print('any', np.any(Z<0))
+
+#
+
+
+# negZ_a1 = a1[np.where(Z<0)]
+# negZ_a2 = a2[np.where(Z<0)]
+# negativeValues = Z[np.where(Z<0)]
+# print('negativeValues:',negativeValues)
+#
+# print('negZ_a1',negZ_a1)
+# print('negZ_a2',negZ_a2)
+#
+#
+# negZ_a1 = negZ_a1.reshape(-1,5)
+# negZ_a2 = negZ_a2.reshape(-1,5)
+# negativeValues = negativeValues.reshape(-1,5)
+#
+# Z_pos = energyVec(tmp1_pos,tmp2_pos,q1,q2,q12,q3,b1,b2)
+# Z_neg = energyVec(tmp1_neg,tmp2_neg,q1,q2,q12,q3,b1,b2)
+
+
+
+
+
+# print('Test energy:' , energy(np.array([1,1]),q1,q2,q12,q3,b1,b2))
+
+
+
+
+# print('Z_pos.shape', Z_pos.shape)
+
+
+
+
+
+
+
+## -- PLOT :
+mpl.rcParams['text.usetex'] = True
+mpl.rcParams["font.family"] = "serif"
+mpl.rcParams["font.size"] = "9"
+
+label_size = 8
+mpl.rcParams['xtick.labelsize'] = label_size
+mpl.rcParams['ytick.labelsize'] = label_size
+
+plt.style.use('seaborn')
+# plt.style.use('seaborn-whitegrid')
+# sns.set()
+# plt.style.use('seaborn-whitegrid')
+
+label_size = 9
+mpl.rcParams['xtick.labelsize'] = label_size
+mpl.rcParams['ytick.labelsize'] = label_size
+
+width = 6.28 *0.5
+# width = 6.28 *0.33
+# width = 6.28
+height = width #/ 1.618
+
+# width = 452.9579/2
+# size= set_size(width, fraction=0.5)
+# print('set_size(width, fraction=0.5)', set_size(width, fraction=1))
+# print('size[0]',size[0])
+
+f_size = 10
+# fig= plt.figure()
+fig, ax = plt.subplots()
+# fig.set_size_inches(width, height)
+# fig.set_size_inches(set_size(width, fraction=0.5))
+# ax = plt.axes(projection ='3d', adjustable='box')
+# ax = plt.axes((0.17,0.21 ,0.75,0.75))
+
+# ax = plt.axes((0.17,0.23 ,0.7,0.7))
+# ax = plt.axes((0.17,0.23 ,1.0,1.0))
+# ax=plt.axes()
+# ax = plt.axes((0.15,0.18,0.8,0.8))
+# ax.tick_params(axis='x',which='major', direction='out',pad=5)
+# ax.tick_params(axis='y',which='major', length=3, width=1, direction='out',pad=3)
+# ax.xaxis.set_major_locator(MultipleLocator(0.1))
+# ax.xaxis.set_minor_locator(MultipleLocator(0.05))
+# ax.xaxis.set_major_locator(plt.MultipleLocator(np.pi / 8))
+# ax.xaxis.set_minor_locator(plt.MultipleLocator(np.pi / 16))
+# ax.xaxis.set_major_locator(plt.MultipleLocator(np.pi / 2))
+# ax.xaxis.set_minor_locator(plt.MultipleLocator(np.pi / 4))
+# ax.xaxis.set_major_formatter(plt.FuncFormatter(format_func))
+ax.grid(True,which='major',axis='both',alpha=0.3)
+
+# Substract constant:
+# c = (b1**2)*q1+b1*b2*q12+(b2**2)*q2
+# Z = Z-c
+#
+# print('Value of c:', c)
+
+
+
+print('Z.min()', Z.min())
+print('Z.max()', Z.max())
+norm=mcolors.Normalize(Z.min(),Z.max())
+# facecolors=cm.brg(norm)
+
+
+
+
+cmap=mpl.cm.RdBu_r
+cmap=mpl.cm.viridis_r
+# cmap=mpl.cm.bwr
+cmap=mpl.cm.coolwarm
+# cmap=mpl.cm.gnuplot
+cmap=mpl.cm.magma_r
+# cmap=mpl.cm.inferno_r
+# cmap=mpl.cm.plasma
+# cmap=mpl.cm.plasma_r
+# cmap=mpl.cm.cividis_r
+# cmap = mpl.colors.LinearSegmentedColormap.from_list("", ["blue","violet","red"])
+# cmap = mpl.colors.LinearSegmentedColormap.from_list("", ["blue","orange"])
+
+# cmap = mpl.colors.LinearSegmentedColormap.from_list("", [(0,"red"), (.1,"violet"), (.5, "blue"), (1.0, "green")])
+# make a colormap that has land and ocean clearly delineated and of the
+# same length (256 + 256)
+#
+# colors_undersea = plt.cm.terrain(np.linspace(0, 0.17, 256))
+# colors_land = plt.cm.terrain(np.linspace(0.25, 1, 256))
+# all_colors = np.vstack((colors_undersea, colors_land))
+# # cmap = mcolors.LinearSegmentedColormap.from_list(
+# # 'terrain_map', all_colors)
+
+
+# cmap = px.colors.sequential.agsunset
+# cmap = plotly.colors.PLOTLY_SCALES["Viridis"]
+
+
+
+
+# cmap = cm.brg(Z)
+divnorm=mcolors.TwoSlopeNorm(vmin=Z.min(), vcenter=0., vmax=Z.max())
+divnorm=mcolors.TwoSlopeNorm(vmin=Z.min(), vcenter=(Z.max()+Z.min())/2, vmax=Z.max())
+# divnorm=mcolors.TwoSlopeNorm(vmin=-500, vcenter=0, vmax=Z.max())
+
+# divnorm=mcolors.TwoSlopeNorm(vmin=-10, vcenter=0. ,vmax=10)
+# divnorm=mcolors.TwoSlopeNorm(vmin=-10, vcenter=0., vmax=Z.max())
+
+# divnorm=mcolors.LogNorm(vmin=Z.min(), vmax=Z.max()) #Test LogNorm
+
+# cmap = cm.brg(divnorm(Z))
+
+# ax.imshow(Z, extent=[-20, 20, -20, 20],origin='lower', norm = norm,
+# cmap='coolwarm', alpha=0.6)
+
+# ax.imshow(Z, extent=[-20, 20, -20, 20],origin='lower',
+# cmap='coolwarm', alpha=0.6)
+# ax.imshow(Z, extent=[-20, 20, -20, 20],origin='lower',
+# cmap=cmap, alpha=0.6)
+
+# divnorm=mcolors.TwoSlopeNorm(vmin=Z.min(), vcenter=0., vmax=Z.max())
+# plt.imshow(Z, extent=[x.min(), x.max(), y.min(), y.max()],origin='lower',
+# cmap=cmap, alpha=0.6)
+
+# I = plt.imshow(Z, extent=[x.min(), x.max(), y.min(), y.max()],origin='lower', norm = divnorm,
+# cmap=cmap, alpha=0.6)
+# plt.imshow(Z, extent=[x.min(), x.max(), y.min(), y.max()],origin='lower', norm = divnorm,
+# cmap=cmap, alpha=0.9)
+# plt.imshow(Z, extent=[x.min(), x.max(), y.min(), y.max()],origin='lower', norm = divnorm,
+# cmap=cmap, alpha=0.6)
+
+
+# I = plt.imshow(Z, extent=[x.min(), x.max(), y.min(), y.max()],origin='lower',
+ # cmap=cmap, alpha=0.6)
+
+
+# I = plt.imshow(Z, extent=[x.min(), x.max(), y.min(), y.max()],origin='lower', norm = mcolors.CenteredNorm(),
+# cmap=cmap, alpha=0.6)
+
+
+
+# COLORBAR :
+# cbar = plt.colorbar()
+# cbar.ax.tick_params(labelsize=f_size)
+# fig.colorbar(I)
+
+
+
+##----- ADD RECTANGLE TO COVER QUADRANT :
+# epsilon = 0.4
+epsilon = 0.001
+# ax.axvspan(0, x.max(), y.min(), 0, alpha=1, color='yellow', zorder=5)#yellow
+# ax.fill_between([0, x.max()], y.min(), 0, alpha=0.3, color='yellow', zorder=5)#yellow
+# ax.fill_between([x.min(), 0], 0, y.max(), alpha=0.3, color='yellow', zorder=5)#yellow
+
+fillcolor = 'royalblue'
+# ax.fill_between([0+epsilon, x.max()], y.min(), 0-epsilon, alpha=0.7, color=fillcolor, zorder=4)#yellow
+# ax.fill_between([x.min(), 0-epsilon], 0+epsilon, y.max(), alpha=0.7, color=fillcolor, zorder=4)#yellow
+# ax.fill_between([0+epsilon, x.max()], y.min(), 0-epsilon, alpha=1.0, color=fillcolor, zorder=4)#yellow
+# ax.fill_between([x.min(), 0-epsilon], 0+epsilon, y.max(), alpha=1.0, color=fillcolor, zorder=4)#yellow
+
+
+## FILL
+ax.fill_between([x.min(), 0-epsilon], y.min(), 0-epsilon, alpha=.25, color=fillcolor, zorder=4)#yellow
+ax.fill_between([0+epsilon, x.max()], 0+epsilon, y.max(), alpha=.25, color=fillcolor, zorder=4)#yellow
+
+
+ax.text(1,1, r"$\mathcal{G}^+_{\mathbf{R}^2}$", color='royalblue', size=15)
+
+# ax.text(0.25,0.25, r"$\mathcal{S}$", color='darkorange', size=15)
+
+# PLOT 1-PARAMETER FAMILY
+
+print('abar:', abar)
+print('abar[0,:]:', abar[0,:])
+print('abar[1,:]:', abar[1,:])
+
+line = ax.plot(abar[:,0],abar[:,1], linewidth=1.5, color='darkorange', linestyle='-', zorder=4)
+
+# plt.arrow(x=1, y=0, dx=0.5, dy=0, )
+# ax.arrow(1, 0, 0.5, 0, head_width=0.05, head_length=0.1, fc='k', ec='k', zorder=5)
+# plt.arrow(1, 0, 0.8, 0, shape='full', lw=0, length_includes_head=True, head_width=.15, zorder=5, color='purple')
+
+
+## PLOT ARROW:
+# plt.arrow(1, 0, 0.5, 0, shape='full', lw=0, length_includes_head=True, head_width=.20, zorder=5, color='darkorange')
+# plt.arrow(0, 1.8, 0, -0.8, shape='full', lw=0, length_includes_head=True, head_width=.20, zorder=5, color='darkorange')
+
+
+# plt.arrow(0, 1.8, 0, -0.8, lw=0, head_width=.12, zorder=5, color='darkorange')
+# plt.arrow(0, 2, 0, -0.5, shape='full', lw=0, length_includes_head=True, head_width=.12, zorder=5, color='darkorange')
+# add_arrow(line, color='darkorange')
+
+
+
+
+# ax.plot_surface(a1,a2, Z, cmap=cm.coolwarm,
+# linewidth=0, antialiased=False)
+
+
+
+# ax.plot(theta_rho, energy_axial1, 'royalblue', zorder=3, label=r"axialMin1")
+# ax.plot(theta_rho, energy_axial2, 'forestgreen', zorder=3, label=r"axialMin2")
+# ax.plot(-1.0*alphas, kappas, 'red', zorder=3, )
+
+
+# print('test:',test)
+# ax.scatter(test[0],test[1])
+# ax.arrow(test[0],test[1],abarperp[0],abarperp[1])
+line_values= np.array(line_values)
+
+ax.plot(line_values[:,0],line_values[:,1],'k--', linewidth=1,color='orange',alpha=0.5)
+
+# lg = ax.legend(bbox_to_anchor=(0.0, 0.75), loc='upper left')
+
+
+
+### PLot x and y- Axes
+ax.plot(ax.get_xlim(),[0,0],'k--', linewidth=0.5)
+ax.plot([0,0],ax.get_ylim(), 'k--', linewidth=0.5)
+
+
+
+ax.set_xlabel(r"$a_1$", fontsize=f_size ,labelpad=0)
+ax.set_ylabel(r"$a_2$", fontsize=f_size ,labelpad=0)
+# ax.set_ylabel(r"energy")
+ax.tick_params(axis='both', which='major', labelsize=f_size)
+ax.tick_params(axis='both', which='minor', labelsize=f_size)
+
+
+
+# ax.set_xticks([-np.pi/2, -np.pi/4 ,0, np.pi/4, np.pi/2 ])
+# labels = ['$0$',r'$\pi/8$', r'$\pi/4$' ,r'$3\pi/8$' , r'$\pi/2$']
+# ax.set_yticklabels(labels)
+
+print('x.max()',x.max())
+print('y.max()',y.max())
+ax.set_xlim(x.min(),x.max())
+ax.set_xlim(y.min(),y.max())
+
+
+
+# ax.legend(loc='upper right')
+
+
+
+fig.set_size_inches(width, height)
+# fig.set_size_inches(set_size(width, fraction=0.33))
+fig.savefig('Energy_ContourG+_Flat.pdf')
+
+plt.show()
+
+
+#
+#
+#
+# # Curve parametrised by \theta_rho = alpha in parameter space
+# N=100;
+# theta_rho = np.linspace(1, 3, num=N)
+# print('theta_rho:', theta_rho)
+#
+#
+# theta_values = []
+#
+#
+# for t in theta_rho:
+#
+# s = (1.0/10.0)*t+0.1
+# theta_values.append(s)
+#
+#
+#
+#
+#
+# theta_rho = np.array(theta_rho)
+# theta_values = np.array(theta_values)
+#
+# betas_ = 2.0
+#
+
+# alphas, betas, thetas = np.meshgrid(theta_rho, betas_, theta_values, indexing='ij')
+#
+#
+# harmonicMeanVec = np.vectorize(harmonicMean)
+# arithmeticMeanVec = np.vectorize(arithmeticMean)
+# prestrain_b1Vec = np.vectorize(prestrain_b1)
+# prestrain_b2Vec = np.vectorize(prestrain_b2)
+#
+# GetMuGammaVec = np.vectorize(GetMuGamma)
+# muGammas = GetMuGammaVec(betas,thetas,gamma,mu1,rho1,InputFilePath ,OutputFilePath )
+#
+# q1_vec = harmonicMeanVec(mu1, betas, thetas)
+# q2_vec = arithmeticMeanVec(mu1, betas, thetas)
+#
+# b1_vec = prestrain_b1Vec(rho1, betas, alphas, thetas)
+# b2_vec = prestrain_b2Vec(rho1, betas, alphas, thetas)
+
+# special case: q12 == 0!! .. braucht eigentlich nur b1 & b2 ...
+
+# print('type b1_values:', type(b1_values))
+
+
+
+# print('size(q1)',q1.shape)
+#
+#
+# energy_axial1 = []
+# energy_axial2 = []
+#
+# # for b1 in b1_values:
+# for i in range(len(theta_rho)):
+# print('index i:', i)
+#
+# print('theta_rho[i]',theta_rho[i])
+# print('theta_values[i]',theta_values[i])
+#
+# q1 = (1.0/6.0)*harmonicMean(mu1, beta, theta_values[i])
+# q2 = (1.0/6.0)*arithmeticMean(mu1, beta, theta_values[i])
+# q12 = 0.0
+# q3 = GetMuGamma(beta, theta_values[i],gamma,mu1,rho1,InputFilePath ,OutputFilePath )
+# b1 = prestrain_b1(rho1,beta, theta_rho[i],theta_values[i] )
+# b2 = prestrain_b2(rho1,beta, theta_rho[i],theta_values[i] )
+#
+#
+# # q2_vec = arithmeticMean(mu1, betas, thetas)
+# #
+# # b1_vec = prestrain_b1Vec(rho1, betas, alphas, thetas)
+# # b2_vec = prestrain_b2Vec(rho1, betas, alphas, thetas)
+# print('q1[i]',q1)
+# print('q2[i]',q2)
+# print('q3[i]',q3)
+# print('b1[i]',b1)
+# print('b2[i]',b2)
+# # print('q1[i]',q1[0][i])
+# # print('q2[i]',q2[i])
+# # print('b1[i]',b1[i])
+# # print('b2[i]',b2[i])
+# #compute axial energy #1 ...
+#
+# a_axial1 = np.array([b1,0])
+# a_axial2 = np.array([0,b2])
+# b = np.array([b1,b2])
+#
+# H = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+# A = np.array([[q1,1/2*q12], [1/2*q12,q2] ])
+#
+#
+# tmp = H.dot(a_axial1)
+#
+# print('H',H)
+# print('A',A)
+# print('b',b)
+# print('a_axial1',a_axial1)
+# print('tmp',tmp)
+#
+# tmp = (1/2)*a_axial1.dot(tmp)
+# print('tmp',tmp)
+#
+# tmp2 = A.dot(b)
+# print('tmp2',tmp2)
+# tmp2 = 2*a_axial1.dot(tmp2)
+#
+# print('tmp2',tmp2)
+# energy_1 = tmp - tmp2
+# print('energy_1',energy_1)
+#
+#
+# energy_axial1.append(energy_1)
+#
+#
+# tmp = H.dot(a_axial2)
+#
+# print('H',H)
+# print('A',A)
+# print('b',b)
+# print('a_axial2',a_axial2)
+# print('tmp',tmp)
+#
+# tmp = (1/2)*a_axial2.dot(tmp)
+# print('tmp',tmp)
+#
+# tmp2 = A.dot(b)
+# print('tmp2',tmp2)
+# tmp2 = 2*a_axial2.dot(tmp2)
+#
+# print('tmp2',tmp2)
+# energy_2 = tmp - tmp2
+# print('energy_2',energy_2)
+#
+#
+# energy_axial2.append(energy_2)
+#
+#
+#
+#
+#
+# print('theta_values', theta_values)
+#
+#
+#
+
+
+#
+#
+#
+#
+# kappas = []
+# alphas = []
+# # G.append(float(s[0]))
+#
+#
+#
+#
+# for t in T :
+#
+# abar_current = sstar*abar+t*abarperp;
+# # print('abar_current', abar_current)
+# abar_current[abar_current < 1e-10] = 0
+# # print('abar_current', abar_current)
+#
+# # G = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+# G = [abar_current[0], abar_current[1] , (2*abar_current[0]*abar_current[1])**0.5 ]
+#
+# e = [(abar_current[0]/(abar_current[0]+abar_current[1]))**0.5, (abar_current[1]/(abar_current[0]+abar_current[1]))**0.5]
+# kappa = abar_current[0]+abar_current[1]
+# alpha = math.atan2(e[1], e[0])
+#
+# print('angle current:', alpha)
+#
+# kappas.append(kappa)
+# alphas.append(alpha)
+#
+#
+#
+# alphas = np.array(alphas)
+# kappas = np.array(kappas)
+#
+#
+# print('kappas:',kappas)
+# print('alphas:',alphas)
+# print('min alpha:', min(alphas))
+# print('min kappa:', min(kappas))
+#
+# mpl.rcParams['text.usetex'] = True
+# mpl.rcParams["font.family"] = "serif"
+# mpl.rcParams["font.size"] = "9"
+# width = 6.28 *0.5
+# height = width / 1.618
+# fig = plt.figure()
+# # ax = plt.axes((0.15,0.21 ,0.75,0.75))
+# ax = plt.axes((0.15,0.21 ,0.8,0.75))
+# ax.tick_params(axis='x',which='major', direction='out',pad=5)
+# ax.tick_params(axis='y',which='major', length=3, width=1, direction='out',pad=3)
+# # ax.xaxis.set_major_locator(MultipleLocator(0.1))
+# # ax.xaxis.set_minor_locator(MultipleLocator(0.05))
+# # ax.xaxis.set_major_locator(plt.MultipleLocator(np.pi / 8))
+# # ax.xaxis.set_minor_locator(plt.MultipleLocator(np.pi / 16))
+# ax.xaxis.set_major_locator(plt.MultipleLocator(np.pi / 2))
+# ax.xaxis.set_minor_locator(plt.MultipleLocator(np.pi / 4))
+# ax.xaxis.set_major_formatter(plt.FuncFormatter(format_func))
+# ax.grid(True,which='major',axis='both',alpha=0.3)
+#
+#
+#
+#
+# ax.plot(alphas, kappas, 'royalblue', zorder=3, )
+# ax.plot(-1.0*alphas, kappas, 'red', zorder=3, )
diff --git a/src/1-ParameterFamily_G+_v3.py b/src/1-ParameterFamily_G+_v3.py
index beaa0763212583e92aae9071b92fd1d39aa2804d..ee1240696d58bf30c52eab92faeaf006f1ed0155 100644
--- a/src/1-ParameterFamily_G+_v3.py
+++ b/src/1-ParameterFamily_G+_v3.py
@@ -407,9 +407,12 @@ print('----------------------------')
# ----------------------------------------------------------------
N=1000;
+# scale_domain = 5
+# translate_startpoint = -5
+
scale_domain = 5
+translate_startpoint = -1.8
-translate_startpoint = -5
# T = np.linspace(-sstar*(q12+2*q3)/(2*q2), sstar*(2*q2)/(q12+2*q3), num=N)
T = np.linspace(-sstar*(q12+2*q3)/(2*q2)*scale_domain + translate_startpoint, sstar*(2*q2)/(q12+2*q3)*scale_domain , num=N)
@@ -697,8 +700,9 @@ mpl.rcParams['xtick.labelsize'] = label_size
mpl.rcParams['ytick.labelsize'] = label_size
width = 6.28 *0.5
-width = 6.28
+# width = 6.28
height = width / 1.618
+height = width
fig = plt.figure()
ax = plt.axes(projection ='3d', adjustable='box')
@@ -872,6 +876,10 @@ cmap = mpl.colors.ListedColormap(["royalblue"], name='from_list', N=None)
+
+print('abar', abar)
+print('abar.shape',abar.shape)
+
line = ax.plot(abar[0,:],abar[1,:],Z_bar, linewidth=2, color='coral', zorder=1)
# CS = ax.contour(X_1,Y_1,Z1, colors='k', levels=18, linewidths=(0.5,))
@@ -882,7 +890,8 @@ end = np.array([abar[0,500],abar[1,500],Z_bar[500]])
-idx = np.where(np.round(Z_bar,3) == np.round( 0.03581463,3) )
+# idx = np.where(np.round(Z_bar,3) == np.round( 0.03581463,3) )
+idx = np.where(np.round(Z_bar,3) == np.round( 0.02823972,3) )
print('idx[0][0]', idx[0][0])
# abar_1 = abar[0,0:idx[0][0]]
@@ -1034,8 +1043,11 @@ print('dir:', dir)
arrow_prop_dict = dict(mutation_scale=20, arrowstyle='-|>', color='k', shrinkA=0, shrinkB=0)
# style = ArrowStyle('Fancy', head_length=1, head_width=1.5, tail_width=0.5)
-a = Arrow3D([start[0], end[0]], [start[1], end[1]], [start[2], end[2]], mutation_scale=15, arrowstyle='-|>', color='darkorange')
-ax.add_artist(a)
+
+
+# ADD ARROW:
+# a = Arrow3D([start[0], end[0]], [start[1], end[1]], [start[2], end[2]], mutation_scale=15, arrowstyle='-|>', color='darkorange')
+# ax.add_artist(a)
## ADD Annotation
ax.text(0, 0, 1.5, r"$\mathcal G^+$", color='royalblue', size=12)
diff --git a/src/1-ParameterFamily_G+_v4.py b/src/1-ParameterFamily_G+_v4.py
new file mode 100644
index 0000000000000000000000000000000000000000..4b8cdd19568ed7bd2afa2dada8bbf6ce9f0fe3a9
--- /dev/null
+++ b/src/1-ParameterFamily_G+_v4.py
@@ -0,0 +1,1141 @@
+import numpy as np
+import matplotlib.pyplot as plt
+import sympy as sym
+import math
+import os
+import subprocess
+import fileinput
+import re
+import matlab.engine
+import sys
+from ClassifyMin import *
+from HelperFunctions import *
+# from CellScript import *
+from mpl_toolkits.mplot3d import Axes3D
+import matplotlib.cm as cm
+from vtk.util import numpy_support
+from pyevtk.hl import gridToVTK
+import time
+import matplotlib.ticker as ticker
+
+import matplotlib as mpl
+from matplotlib.ticker import MultipleLocator,FormatStrFormatter,MaxNLocator
+import pandas as pd
+
+import seaborn as sns
+import matplotlib.colors as mcolors
+
+
+from mpl_toolkits.mplot3d.proj3d import proj_transform
+from mpl_toolkits.mplot3d import proj3d
+# from mpl_toolkits.mplot3d.axes3d import Axes3D
+from matplotlib.text import Annotation
+from matplotlib.patches import FancyArrowPatch
+
+
+import mayavi.mlab as mlab
+from mayavi.api import OffScreenEngine
+mlab.options.offscreen = True
+
+from chart_studio import plotly
+import plotly.graph_objs as go
+# from matplotlib import rc
+# rc('text', usetex=True) # Use LaTeX font
+#
+# import seaborn as sns
+# sns.set(color_codes=True)
+
+# set the colormap and centre the colorbar
+class MidpointNormalize(mcolors.Normalize):
+ """
+ Normalise the colorbar so that diverging bars work there way either side from a prescribed midpoint value)
+
+ e.g. im=ax1.imshow(array, norm=MidpointNormalize(midpoint=0.,vmin=-100, vmax=100))
+ """
+ def __init__(self, vmin=None, vmax=None, midpoint=None, clip=False):
+ self.midpoint = midpoint
+ mcolors.Normalize.__init__(self, vmin, vmax, clip)
+
+ def __call__(self, value, clip=None):
+ # I'm ignoring masked values and all kinds of edge cases to make a
+ # simple example...
+ x, y = [self.vmin, self.midpoint, self.vmax], [0, 0.5, 1]
+ return np.ma.masked_array(np.interp(value, x, y), np.isnan(value))
+
+
+
+def format_func(value, tick_number):
+ # find number of multiples of pi/2
+ # N = int(np.round(2 * value / np.pi))
+ # if N == 0:
+ # return "0"
+ # elif N == 1:
+ # return r"$\pi/2$"
+ # elif N == -1:
+ # return r"$-\pi/2$"
+ # elif N == 2:
+ # return r"$\pi$"
+ # elif N % 2 > 0:
+ # return r"${0}\pi/2$".format(N)
+ # else:
+ # return r"${0}\pi$".format(N // 2)
+ ##find number of multiples of pi/2
+ N = int(np.round(4 * value / np.pi))
+ if N == 0:
+ return "0"
+ elif N == 1:
+ return r"$\pi/4$"
+ elif N == -1:
+ return r"$-\pi/4$"
+ elif N == 2:
+ return r"$\pi/2$"
+ elif N == -2:
+ return r"$-\pi/2$"
+ elif N % 2 > 0:
+ return r"${0}\pi/2$".format(N)
+ else:
+ return r"${0}\pi$".format(N // 2)
+
+
+
+def find_nearest(array, value):
+ array = np.asarray(array)
+ idx = (np.abs(array - value)).argmin()
+ return array[idx]
+
+
+def find_nearestIdx(array, value):
+ array = np.asarray(array)
+ idx = (np.abs(array - value)).argmin()
+ return idx
+
+
+
+def energy(a1,a2,q1,q2,q12,q3,b1,b2):
+
+
+ a = np.array([a1,a2])
+ b = np.array([b1,b2])
+ H = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+ A = np.array([[q1,1/2*q12], [1/2*q12,q2] ])
+
+
+ tmp = H.dot(a)
+
+ # print('H',H)
+ # print('A',A)
+ # print('b',b)
+ # print('a',a)
+ # print('tmp',tmp)
+
+ tmp = (1/2)*a.dot(tmp)
+ # print('tmp',tmp)
+
+ tmp2 = A.dot(b)
+ # print('tmp2',tmp2)
+ tmp2 = 2*a.dot(tmp2)
+
+ # print('tmp2',tmp2)
+ energy = tmp - tmp2
+ # print('energy',energy)
+
+
+ # energy_axial1.append(energy_1)
+
+ return energy
+
+
+
+def evaluate(x,y):
+
+ # (abar[0,:]*abar[1,:])**0.5
+
+ return np.sqrt(x*y)
+
+
+# def energy(a1,a2,q1,q2,q12,q3,b1,b2):
+#
+#
+# b = np.array([b1,b2])
+# H = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+# A = np.array([[q1,1/2*q12], [1/2*q12,q2] ])
+#
+#
+# tmp = H.dot(a)
+#
+# print('H',H)
+# print('A',A)
+# print('b',b)
+# print('a',a)
+# print('tmp',tmp)
+#
+# tmp = (1/2)*a.dot(tmp)
+# print('tmp',tmp)
+#
+# tmp2 = A.dot(b)
+# print('tmp2',tmp2)
+# tmp2 = 2*a.dot(tmp2)
+#
+# print('tmp2',tmp2)
+# energy = tmp - tmp2
+# print('energy',energy)
+#
+#
+# # energy_axial1.append(energy_1)
+#
+# return energy
+#
+
+def add_arrow(line, position=None, direction='right', size=15, color=None):
+ """
+ add an arrow to a line.
+
+ line: Line2D object
+ position: x-position of the arrow. If None, mean of xdata is taken
+ direction: 'left' or 'right'
+ size: size of the arrow in fontsize points
+ color: if None, line color is taken.
+ """
+ if color is None:
+ color = line.get_color()
+
+ xdata = line.get_xdata()
+ ydata = line.get_ydata()
+
+ if position is None:
+ position = xdata.mean()
+ # find closest index
+ start_ind = np.argmin(np.absolute(xdata - position))
+ if direction == 'right':
+ end_ind = start_ind + 1
+ else:
+ end_ind = start_ind - 1
+
+ line.axes.annotate('',
+ xytext=(xdata[start_ind], ydata[start_ind]),
+ xy=(xdata[end_ind], ydata[end_ind]),
+ arrowprops=dict(arrowstyle="->", color=color),
+ size=size
+ )
+
+
+
+class Annotation3D(Annotation):
+ def __init__(self, text, xyz, *args, **kwargs):
+ super().__init__(text, xy=(0, 0), *args, **kwargs)
+ self._xyz = xyz
+
+ def draw(self, renderer):
+ x2, y2, z2 = proj_transform(*self._xyz, self.axes.M)
+ self.xy = (x2, y2)
+ super().draw(renderer)
+
+def _annotate3D(ax, text, xyz, *args, **kwargs):
+ '''Add anotation `text` to an `Axes3d` instance.'''
+
+ annotation = Annotation3D(text, xyz, *args, **kwargs)
+ ax.add_artist(annotation)
+
+setattr(Axes3D, 'annotate3D', _annotate3D)
+
+
+
+class Arrow3D(FancyArrowPatch):
+ def __init__(self, xs, ys, zs, *args, **kwargs):
+ FancyArrowPatch.__init__(self, (0,0), (0,0), *args, **kwargs)
+ self._verts3d = xs, ys, zs
+
+ def draw(self, renderer):
+ xs3d, ys3d, zs3d = self._verts3d
+ xs, ys, zs = proj3d.proj_transform(xs3d, ys3d, zs3d, renderer.M)
+ self.set_positions((xs[0],ys[0]),(xs[1],ys[1]))
+ FancyArrowPatch.draw(self, renderer)
+
+
+def _arrow3D(ax, x, y, z, dx, dy, dz, *args, **kwargs):
+ '''Add an 3d arrow to an `Axes3D` instance.'''
+
+ arrow = Arrow3D(x, y, z, dx, dy, dz, *args, **kwargs)
+ ax.add_artist(arrow)
+
+setattr(Axes3D, 'arrow3D', _arrow3D)
+
+################################################################################################################
+################################################################################################################
+################################################################################################################
+
+InputFile = "/inputs/computeMuGamma.parset"
+OutputFile = "/outputs/outputMuGamma.txt"
+# --------- Run from src folder:
+path_parent = os.path.dirname(os.getcwd())
+os.chdir(path_parent)
+path = os.getcwd()
+print(path)
+InputFilePath = os.getcwd()+InputFile
+OutputFilePath = os.getcwd()+OutputFile
+print("InputFilepath: ", InputFilePath)
+print("OutputFilepath: ", OutputFilePath)
+print("Path: ", path)
+
+print('---- Input parameters: -----')
+
+# q1=1;
+# q2=2;
+# q12=1/2;
+# q3=((4*q1*q2)**0.5-q12)/2;
+# # H=[2*q1,q12+2*q3;q12+2*q3,2*q2];
+#
+# H = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+# A = np.array([[q1,1/2*q12], [1/2*q12,q2] ])
+# abar = np.array([q12+2*q3, 2*q2])
+# abar = (1.0/math.sqrt((q12+2*q3)**2+(2*q2)**2))*abar
+#
+# print('abar:',abar)
+#
+# b = np.linalg.lstsq(A, abar)[0]
+# print('b',b)
+#
+#
+# # print('abar:',np.shape(abar))
+# # print('np.transpose(abar):',np.shape(np.transpose(abar)))
+# sstar = (1/(q1+q2))*abar.dot(A.dot(b))
+# # sstar = (1/(q1+q2))*abar.dot(tmp)
+# print('sstar', sstar)
+# abarperp= np.array([abar[1],-abar[0]])
+# print('abarperp:',abarperp)
+
+
+# -------------------------- Input Parameters --------------------
+
+mu1 = 1.0
+rho1 = 1.0
+alpha = 5.0
+theta = 1.0/2
+# theta= 0.1
+beta = 5.0
+
+
+
+# mu1 = 1.0
+# rho1 = 1.0
+# alpha = 2.0
+# theta = 1.0/2
+# # theta= 0.1
+# beta = 5.0
+
+
+#Figure3:
+# mu1 = 1.0
+# rho1 = 1.0
+# alpha = 2.0
+# theta = 1.0/8
+# # theta= 0.1
+# beta = 2.0
+
+
+# alpha= -5
+
+
+#set gamma either to 1. '0' 2. 'infinity' or 3. a numerical positive value
+gamma = '0'
+gamma = 'infinity'
+
+
+lambda1 = 0.0
+
+
+print('---- Input parameters: -----')
+print('mu1: ', mu1)
+print('rho1: ', rho1)
+# print('alpha: ', alpha)
+print('beta: ', beta)
+# print('theta: ', theta)
+print('gamma:', gamma)
+
+print('lambda1: ', lambda1)
+print('----------------------------')
+# ----------------------------------------------------------------
+print('----------------------------')
+
+# ----------------------------------------------------------------
+
+
+
+
+
+
+q1 = (1.0/6.0)*harmonicMean(mu1, beta, theta)
+q2 = (1.0/6.0)*arithmeticMean(mu1, beta, theta)
+q12 = 0.0
+q3 = GetMuGamma(beta, theta,gamma,mu1,rho1,InputFilePath ,OutputFilePath )
+b1 = prestrain_b1(rho1,beta, alpha, theta )
+b2 = prestrain_b2(rho1,beta, alpha, theta )
+
+
+# 1-ParameterFamilyCase:
+
+q1=1;
+q2=2;
+q12=1/2;
+q3=((4*q1*q2)**0.5-q12)/2;
+# H=[2*q1,q12+2*q3;q12+2*q3,2*q2];
+
+H = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+A = np.array([[q1,1/2*q12], [1/2*q12,q2] ])
+abar = np.array([q12+2*q3, 2*q2])
+abar = (1.0/math.sqrt((q12+2*q3)**2+(2*q2)**2))*abar
+
+print('abar:',abar)
+
+b = np.linalg.lstsq(A, abar)[0]
+print('b',b)
+
+b1=b[0]
+b2=b[1]
+
+
+# print('abar:',np.shape(abar))
+# print('np.transpose(abar):',np.shape(np.transpose(abar)))
+sstar = (1/(q1+q2))*abar.dot(A.dot(b))
+# sstar = (1/(q1+q2))*abar.dot(tmp)
+print('sstar', sstar)
+abarperp= np.array([abar[1],-abar[0]])
+print('abarperp:',abarperp)
+
+print('----------------------------')
+
+# ----------------------------------------------------------------
+
+N=1000;
+# scale_domain = 5
+# translate_startpoint = -5
+
+# scale_domain = 5
+# translate_startpoint = -1.8
+
+
+scale_domain = 5
+translate_startpoint = -1.8
+T_line = np.linspace(-sstar*(q12+2*q3)/(2*q2)*scale_domain + translate_startpoint, sstar*(2*q2)/(q12+2*q3)*scale_domain , num=N)
+line_values = []
+for t in T_line :
+ print('sstar*abar+t*abarperp', sstar*abar+t*abarperp)
+ line_values.append(sstar*abar+t*abarperp)
+
+
+
+
+T = np.linspace(-sstar*(q12+2*q3)/(2*q2), sstar*(2*q2)/(q12+2*q3), num=N)
+# T = np.linspace(-sstar*(q12+2*q3)/(2*q2)*scale_domain + translate_startpoint, sstar*(2*q2)/(q12+2*q3)*scale_domain , num=N)
+# T = np.linspace(-2,2, num=N)
+# print('T:', T)
+
+print('T.min():', T.min())
+print('T.max():', T.max())
+
+kappas = []
+alphas = []
+# G.append(float(s[0]))
+
+G_container = []
+abar_container = []
+
+
+abar_tmp = abar
+
+for t in T :
+ abar_current = sstar*abar+t*abarperp;
+ # print('abar_current', abar_current)
+ abar_current[abar_current < 1e-10] = 0
+ # print('abar_current', abar_current)
+ # G = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+ G = [abar_current[0], abar_current[1] , (2*abar_current[0]*abar_current[1])**0.5 ]
+ # print('type of G', type(G))
+ # print('G', G)
+ G_container.append(G)
+ abar_container.append(abar_current)
+ e = [(abar_current[0]/(abar_current[0]+abar_current[1]))**0.5, (abar_current[1]/(abar_current[0]+abar_current[1]))**0.5]
+ kappa = abar_current[0]+abar_current[1]
+ alpha = math.atan2(e[1], e[0])
+ # print('angle current:', alpha)
+ kappas.append(kappa)
+ alphas.append(alpha)
+
+
+alphas = np.array(alphas)
+kappas = np.array(kappas)
+
+# print('G_container', G_container)
+G = np.array(G_container)
+abar = np.array(abar_container)
+
+print('G', G)
+print('abar', abar)
+print('abar.shape',abar.shape)
+
+
+
+
+
+print('q1 = ', q1)
+print('q2 = ', q2)
+print('q3 = ', q3)
+print('q12 = ', q12)
+print('b1 = ', b1)
+print('b2 = ', b2)
+
+num_Points = 20
+num_Points = 50
+num_Points = 200
+
+# Creating dataset
+x = np.linspace(-5,5,num_Points)
+y = np.linspace(-5,5,num_Points)
+
+x = np.linspace(-20,20,num_Points)
+y = np.linspace(-20,20,num_Points)
+
+# x = np.linspace(-10,10,num_Points)
+# y = np.linspace(-10,10,num_Points)
+
+# x = np.linspace(-60,60,num_Points)
+# y = np.linspace(-60,60,num_Points)
+#
+#
+# x = np.linspace(-40,40,num_Points)
+# y = np.linspace(-40,40,num_Points)
+
+
+range = 2
+
+x_1 = np.linspace(0,range,num_Points)
+y_1 = np.linspace(0,range,num_Points)
+x_2 = np.linspace(-range,0,num_Points)
+y_2 = np.linspace(-range,0,num_Points)
+
+
+X_1,Y_1 = np.meshgrid(x_1,y_1)
+X_2,Y_2 = np.meshgrid(x_2,y_2)
+
+
+a1, a2 = np.meshgrid(x,y)
+
+# geyser = sns.load_dataset("geyser")
+# print('type of geyser:', type(geyser))
+# print('geyser:',geyser)
+
+ContourRange=20
+
+x_in = np.linspace(-ContourRange,ContourRange,num_Points)
+y_in = np.linspace(-ContourRange,ContourRange,num_Points)
+a1_in, a2_in = np.meshgrid(x_in,y_in)
+
+# print('a1:', a1)
+# print('a2:',a2 )
+#
+# print('a1.shape', a1.shape)
+
+#-- FILTER OUT VALUES for G+ :
+
+tmp1 = a1[np.where(a1*a2 >= 0)]
+tmp2 = a2[np.where(a1*a2 >= 0)]
+
+# tmp1 = a1[a1*a2 >= 0]
+# tmp2 = a2[a1*a2 >= 0]
+
+# tmp1 = a1[np.where(a1>=0 and a2 >= 0)]
+# tmp2 = a2[np.where(a1>=0 and a2 >= 0)]
+
+
+# tmp1 = tmp1[np.where(a1 >= 0)]
+# tmp2 = tmp2[np.where(a1 >= 0)]
+
+# tmp1_pos = a1[np.where(a1*a2 >= 0)]
+# tmp2_neg = a2[np.where(a1*a2 >= 0)]
+
+
+
+print('tmp1.shape',tmp1.shape)
+print('tmp1.shape[0]',tmp1.shape[0])
+print('tmp2.shape',tmp2.shape)
+print('tmp2.shape[0]',tmp2.shape[0])
+
+
+
+tmp1 = tmp1.reshape(-1,int(tmp1.shape[0]/2))
+tmp2 = tmp2.reshape(-1,int(tmp2.shape[0]/2))
+
+print('tmp1.shape',tmp1.shape)
+print('tmp1.shape[0]',tmp1.shape[0])
+print('tmp2.shape',tmp2.shape)
+print('tmp2.shape[0]',tmp2.shape[0])
+
+# np.take(a, np.where(a>100)[0], axis=0)
+# tmp1 = np.take(a1, np.where(a1*a2 >= 0)[0], axis=0)
+# tmp2 = np.take(a1, np.where(a1*a2 >= 0)[0], axis=0)
+# tmp2 = a2[np.where(a1*a2 >= 0)]
+
+# tmp1 = a1[a1*a2 >= 0]
+# tmp2 = a2[a1*a2 >= 0]
+
+
+# tmp1_pos = a1[np.where(a1*a2 >= 0) ]
+# tmp2_pos = a2[np.where(a1*a2 >= 0) ]
+# tmp1_pos = tmp1_pos[np.where(tmp1_pos >= 0)]
+# tmp2_pos = tmp2_pos[np.where(tmp2_pos >= 0)]
+
+# tmp1_neg = a1[a1*a2 >= 0 ]
+# tmp2_neg = a2[a1*a2 >= 0 ]
+# tmp1_neg = tmp1_neg[tmp1_neg < 0]
+# tmp2_neg = tmp2_neg[tmp2_neg < 0]
+# a1 = tmp1
+# a2 = tmp2
+#
+# a1 = a1.reshape(-1,5)
+# a2 = a2.reshape(-1,5)
+
+# tmp1_pos = tmp1_pos.reshape(-1,5)
+# tmp2_pos = tmp2_pos.reshape(-1,5)
+# tmp1_neg = tmp1_neg.reshape(-1,5)
+# tmp2_neg = tmp2_neg.reshape(-1,5)
+
+
+# print('a1:', a1)
+# print('a2:',a2 )
+# print('a1.shape', a1.shape)
+
+
+
+
+
+energyVec = np.vectorize(energy)
+
+# Z = energyVec(np.array([a1,a2]),q1,q2,q12,q3,b1,b2)
+# Z = energyVec(a1,a2,q1,q2,q12,q3,b1,b2)
+#
+# Z_in = energyVec(a1_in,a2_in,q1,q2,q12,q3,b1,b2)
+
+
+
+
+# Z = (tmp2**2)/tmp1
+Z = np.sqrt(tmp1*tmp2)
+
+
+Z1 = np.sqrt(X_1*Y_1)
+Z2 = np.sqrt(X_2*Y_2)
+
+# Z_bar = np.sqrt(abar[0,:]*abar[1,:])
+Z_bar = (abar[0,:]*abar[1,:])**0.5*abar
+
+abar = abar.T
+
+
+
+v1 = abar[0,:]
+v2 = abar[1,:]
+
+# print('a1:', a1)
+# print('a2:',a2 )
+# print('a1.shape', a1.shape)
+
+
+evaluateVec = np.vectorize(evaluate)
+Z_bar = evaluateVec(abar[0,:],abar[1,:])
+# Z = np.sqrt(np.multiply(tmp1,tmp2))
+# Z = np.sqrt(a1*a2)
+
+
+print('v1.shape', v1.shape)
+print('v1', v1)
+
+
+
+
+print('Z:', Z)
+print('Z_bar:', Z_bar)
+# print('any', np.any(Z<0))
+
+#
+
+
+# negZ_a1 = a1[np.where(Z<0)]
+# negZ_a2 = a2[np.where(Z<0)]
+# negativeValues = Z[np.where(Z<0)]
+# print('negativeValues:',negativeValues)
+#
+# print('negZ_a1',negZ_a1)
+# print('negZ_a2',negZ_a2)
+#
+#
+# negZ_a1 = negZ_a1.reshape(-1,5)
+# negZ_a2 = negZ_a2.reshape(-1,5)
+# negativeValues = negativeValues.reshape(-1,5)
+#
+# Z_pos = energyVec(tmp1_pos,tmp2_pos,q1,q2,q12,q3,b1,b2)
+# Z_neg = energyVec(tmp1_neg,tmp2_neg,q1,q2,q12,q3,b1,b2)
+
+
+
+
+
+# print('Test energy:' , energy(np.array([1,1]),q1,q2,q12,q3,b1,b2))
+
+
+
+
+# print('Z_pos.shape', Z_pos.shape)
+
+
+
+
+
+
+
+## -- PLOT :
+mpl.rcParams['text.usetex'] = True
+mpl.rcParams["font.family"] = "serif"
+mpl.rcParams["font.size"] = "9"
+
+label_size = 8
+mpl.rcParams['xtick.labelsize'] = label_size
+mpl.rcParams['ytick.labelsize'] = label_size
+
+# plt.style.use('seaborn')
+plt.style.use('seaborn-whitegrid')
+# sns.set()
+# plt.style.use('seaborn-whitegrid')
+
+label_size = 9
+mpl.rcParams['xtick.labelsize'] = label_size
+mpl.rcParams['ytick.labelsize'] = label_size
+
+width = 6.28 *0.5
+# width = 6.28
+height = width / 1.618
+height = width
+fig = plt.figure()
+
+ax = plt.axes(projection ='3d', adjustable='box')
+# ax = plt.axes((0.17,0.21 ,0.75,0.75))
+# ax = plt.axes((0.15,0.18,0.8,0.8))
+# ax.tick_params(axis='x',which='major', direction='out',pad=5)
+# ax.tick_params(axis='y',which='major', length=3, width=1, direction='out',pad=3)
+# ax.xaxis.set_major_locator(MultipleLocator(0.1))
+# ax.xaxis.set_minor_locator(MultipleLocator(0.05))
+# ax.xaxis.set_major_locator(plt.MultipleLocator(np.pi / 8))
+# ax.xaxis.set_minor_locator(plt.MultipleLocator(np.pi / 16))
+# ax.xaxis.set_major_locator(plt.MultipleLocator(np.pi / 2))
+# ax.xaxis.set_minor_locator(plt.MultipleLocator(np.pi / 4))
+# ax.xaxis.set_major_formatter(plt.FuncFormatter(format_func))
+# ax.grid(True,which='major',axis='both',alpha=0.3)
+ax.grid(True,which='major',axis='xy',alpha=0.3)
+# ax.grid(False,which='major',alpha=0.3)
+# Hide grid lines
+# ax.grid(False)
+
+
+
+# colorfunction=(B*kappa)
+# print('colofunction',colorfunction)
+
+#translate Data
+# Z = Z - (Z.max()-Z.min())/2
+# Z = Z - 50
+# Z = Z - 500
+#
+# Z = Z.T
+
+
+# Substract constant:
+# c = (b1**2)*q1+b1*b2*q12+(b2**2)*q2
+# Z = Z-c
+
+# print('Value of c:', c)
+
+
+
+# print('Z.min()', Z.min())
+# print('Z.max()', Z.max())
+# norm=mcolors.Normalize(Z.min(),Z.max())
+# facecolors=cm.brg(norm)
+
+
+# print('norm:', norm)
+# print('type of norm', type(norm))
+# print('norm(0):', norm(0))
+# print('norm(Z):', norm(Z))
+
+# ax.plot(theta_rho, theta_values, 'royalblue', zorder=3, )
+
+# ax.scatter(a1,a2, s=0.5)
+
+# ax.scatter(tmp1_pos,tmp2_pos, s=0.5)
+# ax.scatter(tmp1_neg,tmp2_neg, s=0.5)
+
+# CS = ax.contour(a1, a2, Z,10, cmap=plt.cm.gnuplot, levels=100 )
+# CS = ax.contour(a1, a2, Z,10, cmap=plt.cm.gnuplot, levels=20 )
+
+
+# sns.kdeplot(np.array([a1, a2, Z]))
+# sns.kdeplot(tmp1_pos,tmp2_pos,Z_pos)
+
+# levels = [-5.0, -4, -3, 0.0, 1.5, 2.5, 3.5]
+# CS = ax.contour(a1, a2, Z,10, cmap=plt.cm.gnuplot, corner_mask=True,levels=levels)
+# CS = ax.contour(a1, a2, Z, cmap=plt.cm.gnuplot(norm(Z)), corner_mask=True)
+# CS = ax.contour(a1, a2, Z, cm.brg(norm(Z)), levels=20)
+# CS = ax.contour(a1, a2, Z, cmap=plt.cm.gnuplot, levels=20)
+# CS = ax.contour(a1, a2, Z, colors='k', levels=14, linewidths=(0.5,))
+# CS = ax.contour(a1, a2, Z, colors='k', levels=18, linewidths=(0.5,))
+
+# ax.contour(negZ_a1, negZ_a2, negativeValues, colors='k', linewidths=(0.5,))
+# CS = ax.contour(a1_in, a2_in, Z_in, colors='k', linewidths=(0.5,))
+
+
+
+# df = pd.DataFrame(data=Z_in, columns=a1_in, index=a2_in)
+# df2 = pd.DataFrame(np.array([[1, 2, 3], [4, 5, 6], [7, 8, 9]]),
+# columns=['a', 'b', 'c'])
+
+
+
+
+# sns.kdeplot(data=df2, x="waiting", y="duration")
+# sns.kdeplot(data=df2)
+
+# CS = ax.contour(a1, a2, Z, colors='k', linewidths=(0.5,))
+
+# CS = ax.contour(a1, a2, Z,10, cmap=plt.cm.gnuplot, extend='both', levels=50)
+# CS = ax.contourf(a1, a2, Z,10, colors='k', extend='both', levels=50)
+# CS = ax.contourf(a1, a2, Z,10, colors='k')
+#
+# # CS = ax.contour(tmp1_pos,tmp2_pos, Z_pos,10, cmap=plt.cm.gnuplot, levels=10 )
+# # CS = ax.contour(tmp1_pos,tmp2_pos, Z_pos,10, cmap=plt.cm.gnuplot, corner_mask=True)
+#
+# CS = ax.contour(a1, a2, Z,10, colors = 'k')
+# ax.clabel(CS, inline=True, fontsize=4)
+
+
+# cmap = cm.brg(norm(Z))
+#
+# C_map = cm.inferno(norm(Z))
+
+# ax.imshow(Z, cmap=C_map, extent=[-20, 20, -20, 20], origin='lower', alpha=0.5)
+
+# ax.imshow(norm(Z), extent=[-20, 20, -20, 20], origin='lower',
+# cmap='bwr', alpha=0.8)
+
+# ax.imshow(norm(Z), extent=[-20, 20, -20, 20],origin='lower', vmin=Z.min(), vmax=Z.max(),
+# cmap='bwr', alpha=0.6)
+
+# ax.imshow(norm(Z), extent=[-20, 20, -20, 20],origin='lower', norm = norm,
+# cmap='coolwarm', alpha=0.6)
+
+
+cmap=mpl.cm.RdBu_r
+# cmap=mpl.cm.viridis_r
+cmap=mpl.cm.bwr
+# # cmap=mpl.cm.coolwarm
+# # cmap=mpl.cm.gnuplot
+# cmap=mpl.cm.viridis
+# cmap=mpl.cm.inferno
+cmap=mpl.cm.Blues
+# cmap=mpl.cm.magma
+# cmap=mpl.cm.cividis
+# cmap=mpl.cm.gnuplot
+# cmap=mpl.cm.gnuplot
+cmap = mpl.colors.ListedColormap(["royalblue"], name='from_list', N=None)
+# m = cm.ScalarMappable(norm=norm, cmap=cmap)
+# m = cm.ScalarMappable(cmap=cmap)
+
+# cmap = cm.brg(Z)
+# divnorm=mcolors.TwoSlopeNorm(vmin=Z.min(), vcenter=0., vmax=Z.max())
+
+# ax.imshow(Z, extent=[-20, 20, -20, 20],origin='lower', norm = norm,
+# cmap='coolwarm', alpha=0.6)
+
+# ax.imshow(Z, extent=[-20, 20, -20, 20],origin='lower',
+# cmap='coolwarm', alpha=0.6)
+# ax.imshow(Z, extent=[-20, 20, -20, 20],origin='lower',
+# cmap=cmap, alpha=0.6)
+
+# divnorm=mcolors.TwoSlopeNorm(vmin=Z.min(), vcenter=0., vmax=Z.max())
+# plt.imshow(Z, extent=[x.min(), x.max(), y.min(), y.max()],origin='lower',
+# cmap=cmap, alpha=0.6)
+
+# plt.imshow(Z, extent=[x.min(), x.max(), y.min(), y.max()],origin='lower', norm = divnorm,
+# cmap=cmap, alpha=0.6)
+
+
+
+
+# COLORBAR :
+# cbar = plt.colorbar()
+# cbar.ax.tick_params(labelsize=8)
+
+
+
+
+# ##----- ADD RECTANGLE TO COVER QUADRANT :
+# epsilon = 0.4
+# epsilon = 0.1
+# # ax.axvspan(0, x.max(), y.min(), 0, alpha=1, color='yellow', zorder=5)#yellow
+# # ax.fill_between([0, x.max()], y.min(), 0, alpha=0.3, color='yellow', zorder=5)#yellow
+# # ax.fill_between([x.min(), 0], 0, y.max(), alpha=0.3, color='yellow', zorder=5)#yellow
+# ax.fill_between([0+epsilon, x.max()], y.min(), 0-epsilon, alpha=0.7, color='gray', zorder=5)#yellow
+# ax.fill_between([x.min(), 0-epsilon], 0+epsilon, y.max(), alpha=0.7, color='gray', zorder=5)#yellow
+
+
+
+#### LINE SEGMENTS :
+line = ax.plot(abar[0,:],abar[1,:],Z_bar, linewidth=2, color='coral', zorder=5)
+# line = ax.plot(abar[0,:],abar[1,:],Z_bar, linewidth=2, color='coral', zorder=1)
+# print('abar', abar)
+# print('abar.shape',abar.shape)
+# start = np.array([abar[0,499],abar[1,499],Z_bar[499]])
+# end = np.array([abar[0,500],abar[1,500],Z_bar[500]])
+# idx = np.where(np.round(Z_bar,3) == np.round( 0.02823972,3) )
+# print('idx[0][0]', idx[0][0])
+# line = ax.plot(abar[0,idx[0][0]:-1],abar[1,idx[0][0]:-1],Z_bar[idx[0][0]:-1], linewidth=2, color='coral', zorder=5)
+### -----------------------------------
+
+
+
+
+
+# ax.plot_surface(a1,a2, Z, cmap=cm.coolwarm,
+# linewidth=0, antialiased=False)
+
+# ax.plot_surface(tmp1,tmp2, Z, cmap=cm.coolwarm,
+# linewidth=0, antialiased=False)
+
+# ax.scatter(X_1,Y_1,Z1, s=0.2)
+# ax.scatter(X_2,Y_2,Z2, s=0.2)
+
+
+# X = np.concatenate((X_1, X_2), axis=0)
+# Y = np.concatenate((Y_1, Y_2), axis=0)
+# Z = np.concatenate((Z1, Z2), axis=0)
+# ax.plot_surface(X,Y,Z)
+
+
+ax.plot_surface(X_1,Y_1,Z1 ,cmap=cmap,
+ linewidth=0, antialiased=True,alpha=.35, zorder=5)
+ax.plot_surface(X_2,Y_2,Z2 ,cmap=cmap,
+ linewidth=0, antialiased=True,alpha=.35, zorder=5)
+# ax.plot_surface(X_1,Y_1,Z1 , facecolor = 'lightblue', #cmap=cmap,
+# linewidth=0, antialiased=True, alpha=1, zorder=5)
+# ax.plot_surface(X_2,Y_2,Z2 , facecolor = 'lightblue', edgecolor='none', #cmap=cmap,
+# linewidth=0, antialiased=True, alpha=1, zorder=5)
+
+# ax.plot_surface(X_1,Y_1,Z1 , #color='C0',
+# rstride=1, cstride=1,linewidth=0, antialiased=True, alpha=1, zorder=5)
+
+
+
+
+# ax.plot_surface(X_2,Y_2,Z2 , #color='C0',
+# rstride=1, cstride=1,linewidth=0, alpha=0.8, zorder=5, shade=True)
+# ax.plot_surface(X_2,Y_2,Z2)
+
+# X_2 = X_2.reshape(-1,1).flatten()
+# Y_2 = Y_2.reshape(-1,1).flatten()
+# Z2 = Z2.reshape(-1,1).flatten()
+#
+# ax.plot_trisurf(X_2,Y_2,Z2, color='blue' )
+
+
+# X_1 = X_1.reshape(-1,1).flatten()
+# Y_1 = Y_1.reshape(-1,1).flatten()
+# Z1 = Z1.reshape(-1,1).flatten()
+# ax.plot_trisurf(X_1,Y_1,Z1 , color='blue')
+
+
+### MAYAVI TEST
+# mlab.figure(bgcolor=(1.0, 1.0, 1.0), size=(1000,1000))
+# mlab.view(azimuth=90, elevation=125)
+# mlab.view(azimuth=100, elevation=115)
+# axes = mlab.axes(color=(0, 0, 0), nb_labels=5)
+# mlab.orientation_axes()
+# mlab.mesh(X_1, Y_1,Z1, color=(0,0,1) , transparent=True )
+# mlab.plot3d(abar[0,:],abar[1,:],Z_bar, line_width=1)
+# mlab.mesh(X_2, Y_2,Z2)
+# mlab.savefig("./example.png")
+### --------------------------------------------
+
+
+
+# ax.plot_surface(X_1,Y_1,Z1 , cmap=cmap,
+# linewidth=0, antialiased=False,alpha=1, zorder=5)
+# ax.plot_surface(X_2,Y_2,Z2 , cmap=cmap,
+# linewidth=0, antialiased=True,alpha=1, zorder=5)
+
+# ax.plot_surface(X_2,Y_2,Z2 , color = 'lightblue', #cmap=cmap,
+# linewidth=0, antialiased=True, alpha=1, zorder=5)
+
+
+# ax.plot(G[0,:],G[1,:],G[2,:])
+# ax.plot(abar[0,:],abar[1,:],Z_bar, linewidth=2, color='yellow', linestyle='--')
+# ax.scatter(abar[0,:],abar[1,:],Z_bar, color='purple', zorder=5)
+# ax.plot(abar[0,:],abar[1,:],Z_bar, linewidth=2, color='royalblue', linestyle='--')
+# ax.plot(abar[0,:],abar[1,:],Z_bar, linewidth=3, color='dodgerblue', linestyle='--')
+# ax.plot(abar[0,:],abar[1,:],Z_bar, linewidth=3, color='cornflowerblue', linestyle='--')
+# ax.plot(abar[0,:],abar[1,:],Z_bar, linewidth=3, color='darkorange', linestyle='--')
+# ax.plot(abar[0,:],abar[1,:],Z_bar, linewidth=3, color='yellow', linestyle='--')
+# line = ax.plot(abar[0,:],abar[1,:],Z_bar, linewidth=1, color='coral', linestyle='--', zorder=3)
+
+
+# plot starting point:
+# ax.scatter(abar[0,0],abar[1,0],Z_bar[0], marker='^', s=30, color='black', zorder=5)
+#
+#
+# ax.scatter(abar[0,500],abar[1,500],Z_bar[500], marker='^', s=30, color='purple', zorder=5)
+
+# ax.scatter(start[0],start[1],start[2], marker='^', s=30, color='purple', zorder=5)
+# ax.scatter(end[0],end[1],end[2], marker='^', s=30, color='purple', zorder=5)
+
+
+# define origin
+o = np.array([0,0,0])
+
+start = np.array([1,0,0])
+end = np.array([2.5,0,0])
+
+
+print('start:', start)
+print('end:', end)
+
+
+dir = end-start
+print('dir:', dir)
+# ax.arrow()
+
+# ax.arrow3D(start[0],start[1],start[2],
+# dir[0],dir[1],dir[2],
+# mutation_scale=10,
+# arrowstyle="->",
+# linestyle='dashed',fc='coral',
+# lw = 1,
+# ec ='coral',
+# zorder=3)
+
+# ax.arrow3D(midpoint_mapped[0],midpoint_mapped[1],midpoint_mapped[2],
+# normal[0],normal[1],normal[2],
+# mutation_scale=15,
+# lw = 1.5,
+# arrowstyle="-|>",
+# linestyle='dashed',fc='blue',
+# ec ='blue',
+# zorder = 5)
+
+
+# ax.arrow3D(start[0],start[1],start[2],
+# dir[0],dir[1],dir[2],
+# mutation_scale=20,
+# arrowstyle="->",
+# fc='coral',
+# lw = 1,
+# ec ='coral',
+# zorder=3)
+# ax.arrow3D(start[0],start[1],start[2],
+# dir[0],dir[1],dir[2],
+# mutation_scale=20,
+# arrowstyle="->",
+# fc='coral',
+# lw = 1,
+# ec ='coral',
+# zorder=3)
+
+arrow_prop_dict = dict(mutation_scale=20, arrowstyle='-|>', color='k', shrinkA=0, shrinkB=0)
+# style = ArrowStyle('Fancy', head_length=1, head_width=1.5, tail_width=0.5)
+
+
+# ADD ARROW:
+# a = Arrow3D([start[0], end[0]], [start[1], end[1]], [start[2], end[2]], mutation_scale=15, arrowstyle='-|>', color='darkorange')
+# ax.add_artist(a)
+
+## ADD Annotation
+ax.text(0, 0, 1.5, r"$\mathcal G^+$", color='royalblue', size=12)
+# ax.text(0.5, 0.5, "Test")
+# ax.text(9, 0, 0, "red", color='red')
+
+### ---- Check proof:
+# value at t = 0:
+abar_zero= sstar*abar_tmp
+# value_0 = [abar_zero[0], abar_zero[1] , (2*abar_zero[0]*abar_zero[1])**0.5 ]
+value_0 = evaluate(abar_zero[0], abar_zero[1])
+print('value_0', value_0)
+# ax.scatter(value_0[0],value_0[1],value_0[2], marker='x', s=20, color='dodgerblue', zorder=5)
+# ax.scatter(abar_zero[0], abar_zero[1],value_0, marker='o', s=30, color='dodgerblue', zorder=5)
+## -----------------------------
+
+
+
+
+
+
+
+
+
+
+# ax.scatter(tmp1,tmp2, Z, cmap=cm.coolwarm,
+# linewidth=0, antialiased=False)
+# ax.plot_surface(tmp1,Z, tmp2, cmap=cm.coolwarm,
+# linewidth=0, antialiased=False)
+# ax.plot_trisurf(tmp1,tmp2, Z, cmap=cm.coolwarm,
+# linewidth=0, antialiased=False)
+
+
+# ax.plot(theta_rho, energy_axial1, 'royalblue', zorder=3, label=r"axialMin1")
+# ax.plot(theta_rho, energy_axial2, 'forestgreen', zorder=3, label=r"axialMin2")
+# ax.plot(-1.0*alphas, kappas, 'red', zorder=3, )
+
+
+
+
+# lg = ax.legend(bbox_to_anchor=(0.0, 0.75), loc='upper left')
+
+
+
+
+### PLOT X AND Y AXIS:
+# ax.plot(ax.get_xlim(),[0,0],'k--', linewidth=0.5)
+# ax.plot([0,0],ax.get_ylim(), 'k--', linewidth=0.5)
+ax.plot(ax.get_xlim(),[0,0],'k--', linewidth=1 ,zorder=5)
+ax.plot([0,0],ax.get_ylim(), 'k--', linewidth=1)
+
+
+
+# Plot 1-Parameter Line
+line_values= np.array(line_values)
+ax.plot(line_values[:,0],line_values[:,1],'k--', linewidth=1,color='orange',alpha=0.8)
+
+
+ax.set_xlabel(r"$a_1$", fontsize=10 ,labelpad=0)
+ax.set_ylabel(r"$a_2$", fontsize=10 ,labelpad=0)
+
+
+# ax.get_xaxis().set_visible(False)
+# ax = plt.gca(projection="3d")
+# ax._axis3don = False
+ZL = ax.get_zgridlines()
+
+# ax.set_ylabel(r"energy")
+
+
+# ax.set_xticks([-np.pi/2, -np.pi/4 ,0, np.pi/4, np.pi/2 ])
+# labels = ['$0$',r'$\pi/8$', r'$\pi/4$' ,r'$3\pi/8$' , r'$\pi/2$']
+# ax.set_yticklabels(labels)
+
+
+
+
+
+# ax.legend(loc='upper right')
+
+
+
+fig.set_size_inches(width, height)
+fig.savefig('1-ParameterFamily_G+.pdf')
+
+plt.show()
diff --git a/src/CylindricalMinimizer-Plot.py b/src/CylindricalMinimizer-Plot.py
index 2ebff75f98a1dceabcd561acbab48edcff160de7..11f72c14e1a2274f153d421b6ff4e1e826e1d37d 100644
--- a/src/CylindricalMinimizer-Plot.py
+++ b/src/CylindricalMinimizer-Plot.py
@@ -201,8 +201,8 @@ num_Points = 100
e = np.array([1,0])
-# e = np.array([0,1])
-e = np.array([1/np.sqrt(2),1/np.sqrt(2)])
+e = np.array([0,1])
+# e = np.array([1/np.sqrt(2),1/np.sqrt(2)])
# e = np.array([1/2,np.sqrt(3)/2])
# e = np.array([np.sqrt(3)/2,1/2])
# e = np.array([-1,0])
diff --git a/src/Energy_ContourG+_plotly.py b/src/Energy_ContourG+_plotly.py
index b78b75616477e1d18423e3be67310b9133315755..6b41b5ff3cac652b4880ea70515d723bb5fe3362 100644
--- a/src/Energy_ContourG+_plotly.py
+++ b/src/Energy_ContourG+_plotly.py
@@ -27,7 +27,8 @@ import matplotlib.colors as mcolors
from chart_studio import plotly
import plotly.graph_objs as go
-
+from plotly.subplots import make_subplots
+import plotly.io as pio
# from matplotlib import rc
# rc('text', usetex=True) # Use LaTeX font
#
@@ -45,6 +46,41 @@ def show(fig):
img.show()
+def set_size(width, fraction=1):
+ """Set figure dimensions to avoid scaling in LaTeX.
+
+ Parameters
+ ----------
+ width: float
+ Document textwidth or columnwidth in pts
+ fraction: float, optional
+ Fraction of the width which you wish the figure to occupy
+
+ Returns
+ -------
+ fig_dim: tuple
+ Dimensions of figure in inches
+ """
+ # Width of figure (in pts)
+ fig_width_pt = width * fraction
+
+ # Convert from pt to inches
+ inches_per_pt = 1 / 72.27
+
+ # Golden ratio to set aesthetic figure height
+ # https://disq.us/p/2940ij3
+ golden_ratio = (5**.5 - 1) / 2
+
+ # Figure width in inches
+ fig_width_in = fig_width_pt * inches_per_pt
+ # Figure height in inches
+ fig_height_in = fig_width_in * golden_ratio
+
+ fig_dim = (fig_width_in, fig_height_in)
+
+ return fig_dim
+
+
# set the colormap and centre the colorbar
@@ -559,31 +595,128 @@ print('norm(Z):', norm(Z))
CS = ax.contour(a1_in, a2_in, Z_in, colors='k', linewidths=(0.5,),zorder=5)
-# fig = go.Figure(data = go.Contour(Z_in, a1_in, a2_in))
-fig = go.Figure(data = go.Contour(x = x_in, y = y_in, z = Z_in,
+## PLOTLY:
+
+fig = make_subplots(specs=[[{"secondary_y": True}]])
+
+
+data1 = go.Contour(x = x_in, y = y_in, z = Z_in,
# colorscale='Electric',
colorscale='agsunset',
contours=dict(
coloring ='heatmap',
showlabels = True, # show labels on contours
labelfont = dict( # label font properties
- size = 12,
+ size = 14,
color = 'white',
)
), line_width=2 ,line_smoothing=0.85,
- colorbar=dict(
- title='Color bar title', # title here
- titleside='right',
- titlefont=dict(
- size=14,
- family='Arial, sans-serif')
+ # colorbar=dict(
+ # title='Color bar title', # title here
+ # titleside='right',
+ # titlefont=dict(
+ # size=14,
+ # family='Arial, sans-serif')
+ # )
+
+
)
- ))
+epsilon = 0.4
+epsilon = 0.1
+# data2 = go.Scatter(x=[0+epsilon,x.max(),x.max(), 0+epsilon], y=[0-epsilon,0-epsilon,y.min(),y.min()], fill="toself")
+data2 = go.Scatter(x=[0+epsilon,x.max(),x.max(), 0+epsilon], y=[0-epsilon,0-epsilon,y.min(),y.min()])
+
+# data_tmp = [data1,data2]
+data_tmp = [data1]
+
+fig = go.Figure(data = data_tmp)
+
+# ADD RECTANGLES:
+fig.add_shape(type="rect",
+ x0=0+epsilon, y0=0-epsilon, x1=x.max(), y1=y.min(),
+ line=dict(
+ color="White",
+ width=1,
+ ),
+ fillcolor="White",
+ opacity=0.75
+)
+fig.add_shape(type="rect",
+ x0=x.min(), y0=0+epsilon, x1=0-epsilon, y1=y.max(),
+ line=dict(
+ color="White",
+ width=1
+ ),
+ fillcolor="White",
+ opacity=0.75
+)
+
+
+# ADD COORDINATE LINES
+
+fig.add_shape(type="line",
+ x0=x.min(), y0=0, x1=x.max(), y1=0,
+ line=dict(
+ color="black",
+ width=2,
+ dash="dash",
+ )
+)
+
+fig.add_shape(type="line",
+ x0=0, y0=y.min(), x1=0, y1=y.max(),
+ line=dict(
+ color="black",
+ width=2,
+ dash="dash",
+ )
+)
+
+# fig = go.Figure(data = go.Contour(Z_in, a1_in, a2_in))
+# fig = go.Figure(data = go.Contour(x = x_in, y = y_in, z = Z_in,
+# # colorscale='Electric',
+# colorscale='agsunset',
+# contours=dict(
+# coloring ='heatmap',
+# showlabels = True, # show labels on contours
+# labelfont = dict( # label font properties
+# size = 12,
+# color = 'white',
+# )
+# ), line_width=2 ,line_smoothing=0.85,
+# # colorbar=dict(
+# # title='Color bar title', # title here
+# # titleside='right',
+# # titlefont=dict(
+# # size=14,
+# # family='Arial, sans-serif')
+# # )
+# )
+# )
+
+epsilon = 0.4
+epsilon = 0.1
+# ax.axvspan(0, x.max(), y.min(), 0, alpha=1, color='yellow', zorder=5)#yellow
+# ax.fill_between([0, x.max()], y.min(), 0, alpha=0.3, color='yellow', zorder=5)#yellow
+# ax.fill_between([x.min(), 0], 0, y.max(), alpha=0.3, color='yellow', zorder=5)#yellow
+
+# fillcolor = 'white'
+# ax.fill_between([0+epsilon, x.max()], y.min(), 0-epsilon, alpha=0.7, color=fillcolor, zorder=4)#yellow
+# ax.fill_between([x.min(), 0-epsilon], 0+epsilon, y.max(), alpha=0.7, color=fillcolor, zorder=4)#yellow
+
+
+# trace2 = go.Figure(go.Scatter(x=[0+epsilon,x.max(),x.max(), 0+epsilon], y=[0-epsilon,0-epsilon,y.min(),y.min()], fill="toself"))
+# fig.add_trace(trace1)
+
+# fig.add_trace(trace1)
+# fig.add_trace(trace2.data[0],secondary_y=True)
fig.update_layout(
autosize=False,
- width=500,
- height=500,
+ # width=500,
+ # height=500,
+ width=300,
+ height=300,
# margin=dict(
# l=50,
# r=50,
@@ -594,12 +727,21 @@ fig.update_layout(
# paper_bgcolor="LightSteelBlue",
)
+width = 452.9579/2
+size= set_size(width, fraction=0.5)
+print('set_size(width, fraction=0.5)', set_size(width, fraction=0.5))
+print('size[0]',size[0])
+
+
# fig.show()
-show(fig)
+# show(fig)
# fig.write_image("Plotly-fig1.png", width=width, height=height, scale=1)
fig.write_image("Plotly-fig1.png")
-
+# pio.write_image(fig, "test.svg", width=6.28 *0.33*300, height=6.28 *0.33*300, scale=1)
+# pio.write_image(fig, "test.png", width=6.28*0.33*300, height=6.28*0.33*300)
+pio.write_image(fig, "test.pdf", width=6.28*0.33*300, height=6.28*0.33*300)
+# pio.write_image(fig, "test.pdf", width=width, height=width)
# df = pd.DataFrame(data=Z_in, columns=a1_in, index=a2_in)
# df2 = pd.DataFrame(np.array([[1, 2, 3], [4, 5, 6], [7, 8, 9]]),
# columns=['a', 'b', 'c'])
diff --git a/src/Energy_ContourG+_v2.py b/src/Energy_ContourG+_v2.py
index 07d3ef51386c790ef63a23ecbbe8c841fea73939..c3aa2f0781977c157b65ca51c028ed948dcf44af 100644
--- a/src/Energy_ContourG+_v2.py
+++ b/src/Energy_ContourG+_v2.py
@@ -27,7 +27,8 @@ import matplotlib.colors as mcolors
from chart_studio import plotly
import plotly.graph_objs as go
-
+import plotly.express as px
+import plotly.colors
# from matplotlib import rc
# rc('text', usetex=True) # Use LaTeX font
#
@@ -66,6 +67,42 @@ class MidpointNormalize(mcolors.Normalize):
+def set_size(width, fraction=1):
+ """Set figure dimensions to avoid scaling in LaTeX.
+
+ Parameters
+ ----------
+ width: float
+ Document textwidth or columnwidth in pts
+ fraction: float, optional
+ Fraction of the width which you wish the figure to occupy
+
+ Returns
+ -------
+ fig_dim: tuple
+ Dimensions of figure in inches
+ """
+ # Width of figure (in pts)
+ fig_width_pt = width * fraction
+
+ # Convert from pt to inches
+ inches_per_pt = 1 / 72.27
+
+ # Golden ratio to set aesthetic figure height
+ # https://disq.us/p/2940ij3
+ golden_ratio = (5**.5 - 1) / 2
+
+ # Figure width in inches
+ fig_width_in = fig_width_pt * inches_per_pt
+ # Figure height in inches
+ fig_height_in = fig_width_in * golden_ratio
+
+ fig_dim = (fig_width_in, fig_height_in)
+
+ return fig_dim
+
+
+
def format_func(value, tick_number):
# find number of multiples of pi/2
# N = int(np.round(2 * value / np.pi))
@@ -113,6 +150,31 @@ def find_nearestIdx(array, value):
+
+def check_case(q1,q2,q12,q3,b1,b2):
+
+ # a = np.array([a1,a2])
+ b = np.array([b1,b2])
+ H = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+ A = np.array([[q1,1/2*q12], [1/2*q12,q2] ])
+
+
+ print('det(H)=', np.linalg.det(H))
+
+ # check if g* is in G^*_R^2
+ tmp = A.dot(b)
+
+ ## compute inverse of H :
+ inv_H = np.linalg.inv(H)
+
+ g_star = inv_H.dot(tmp)
+
+ print('g_star=', g_star)
+
+
+ return g_star
+
+
def energy(a1,a2,q1,q2,q12,q3,b1,b2):
@@ -241,6 +303,15 @@ beta = 5.0
+
+# mu1 = 1.0
+# rho1 = 1.0
+# alpha = -0.75
+# theta = 1.0/2
+# # theta= 0.1
+# beta = 5.0
+
+
# mu1 = 1.0
# rho1 = 1.0
# alpha = 2.0
@@ -263,7 +334,7 @@ beta = 5.0
#set gamma either to 1. '0' 2. 'infinity' or 3. a numerical positive value
gamma = '0'
-gamma = 'infinity'
+# gamma = 'infinity'
lambda1 = 0.0
@@ -297,27 +368,22 @@ b1 = prestrain_b1(rho1,beta, alpha, theta )
b2 = prestrain_b2(rho1,beta, alpha, theta )
-# 1-ParameterFamilyCase:
-
-q1=1;
-q2=2;
-q12=1/2;
-q3=((4*q1*q2)**0.5-q12)/2;
-# H=[2*q1,q12+2*q3;q12+2*q3,2*q2];
-
-H = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
-A = np.array([[q1,1/2*q12], [1/2*q12,q2] ])
-abar = np.array([q12+2*q3, 2*q2])
-abar = (1.0/math.sqrt((q12+2*q3)**2+(2*q2)**2))*abar
-
-print('abar:',abar)
-
-b = np.linalg.lstsq(A, abar)[0]
-print('b',b)
-
-b1=b[0]
-b2=b[1]
-
+## ---- 1-ParameterFamilyCase:
+# q1=1;
+# q2=2;
+# q12=1/2;
+# q3=((4*q1*q2)**0.5-q12)/2;
+# # H=[2*q1,q12+2*q3;q12+2*q3,2*q2];
+# H = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+# A = np.array([[q1,1/2*q12], [1/2*q12,q2] ])
+# abar = np.array([q12+2*q3, 2*q2])
+# abar = (1.0/math.sqrt((q12+2*q3)**2+(2*q2)**2))*abar
+# print('abar:',abar)
+# b = np.linalg.lstsq(A, abar)[0]
+# print('b',b)
+# b1=b[0]
+# b2=b[1]
+## ---------------
@@ -329,8 +395,20 @@ print('q12 = ', q12)
print('b1 = ', b1)
print('b2 = ', b2)
+## --- CHECK CASE ---
+
+
+g_star = check_case(q1,q2,q12,q3,b1,b2)
+
+
+
+
+
+
+## -------------------------------------
+
num_Points = 400
-# num_Points = 200
+num_Points = 200
# num_Points = 20
@@ -341,6 +419,9 @@ y = np.linspace(-5,5,num_Points)
x = np.linspace(-20,20,num_Points)
y = np.linspace(-20,20,num_Points)
+
+x = np.linspace(-2,2,num_Points)
+y = np.linspace(-2,2,num_Points)
# x = np.linspace(-10,10,num_Points)
# y = np.linspace(-10,10,num_Points)
@@ -354,11 +435,12 @@ y = np.linspace(-20,20,num_Points)
a1, a2 = np.meshgrid(x,y)
-geyser = sns.load_dataset("geyser")
-print('type of geyser:', type(geyser))
-print('geyser:',geyser)
+# geyser = sns.load_dataset("geyser")
+# print('type of geyser:', type(geyser))
+# print('geyser:',geyser)
-ContourRange=20
+# ContourRange=20
+ContourRange=2
x_in = np.linspace(-ContourRange,ContourRange,num_Points)
y_in = np.linspace(-ContourRange,ContourRange,num_Points)
@@ -406,9 +488,9 @@ tmp2 = tmp2.reshape(-1,5)
# tmp2_neg = tmp2_neg.reshape(-1,5)
-print('a1:', a1)
-print('a2:',a2 )
-print('a1.shape', a1.shape)
+# print('a1:', a1)
+# print('a2:',a2 )
+# print('a1.shape', a1.shape)
@@ -425,7 +507,6 @@ Z_in = energyVec(a1_in,a2_in,q1,q2,q12,q3,b1,b2)
print('Z:', Z)
-
print('any', np.any(Z<0))
#
@@ -483,12 +564,26 @@ mpl.rcParams['xtick.labelsize'] = label_size
mpl.rcParams['ytick.labelsize'] = label_size
width = 6.28 *0.5
+# width = 6.28 *0.33
# width = 6.28
-height = width / 1.618
-fig = plt.figure()
-
+height = width #/ 1.618
+
+# width = 452.9579/2
+# size= set_size(width, fraction=0.5)
+# print('set_size(width, fraction=0.5)', set_size(width, fraction=1))
+# print('size[0]',size[0])
+
+f_size = 8
+# fig= plt.figure()
+fig, ax = plt.subplots()
+# fig.set_size_inches(width, height)
+# fig.set_size_inches(set_size(width, fraction=0.5))
# ax = plt.axes(projection ='3d', adjustable='box')
-ax = plt.axes((0.17,0.21 ,0.75,0.75))
+# ax = plt.axes((0.17,0.21 ,0.75,0.75))
+
+# ax = plt.axes((0.17,0.23 ,0.7,0.7))
+# ax = plt.axes((0.17,0.23 ,1.0,1.0))
+# ax=plt.axes()
# ax = plt.axes((0.15,0.18,0.8,0.8))
# ax.tick_params(axis='x',which='major', direction='out',pad=5)
# ax.tick_params(axis='y',which='major', length=3, width=1, direction='out',pad=3)
@@ -513,10 +608,10 @@ ax = plt.axes((0.17,0.21 ,0.75,0.75))
# Substract constant:
-c = (b1**2)*q1+b1*b2*q12+(b2**2)*q2
-Z = Z-c
-
-print('Value of c:', c)
+# c = (b1**2)*q1+b1*b2*q12+(b2**2)*q2
+# Z = Z-c
+#
+# print('Value of c:', c)
@@ -554,17 +649,24 @@ print('norm(Z):', norm(Z))
# CS = ax.contour(a1, a2, Z, colors='k', levels=18, linewidths=(0.5,))
# ax.contour(negZ_a1, negZ_a2, negativeValues, colors='k', linewidths=(0.5,))
-CS = ax.contour(a1_in, a2_in, Z_in, colors='k', linewidths=(0.5,),zorder=5)
+# CS = ax.contour(a1_in, a2_in, Z_in, colors='k', linewidths=(0.75) ,zorder=5)
+step = (-1)*Z.min()
-# df = pd.DataFrame(data=Z_in, columns=a1_in, index=a2_in)
-# df2 = pd.DataFrame(np.array([[1, 2, 3], [4, 5, 6], [7, 8, 9]]),
-# columns=['a', 'b', 'c'])
+levels = np.arange(Z.min(),Z.max()/2,step)
+levels = np.arange(Z.min(),Z.max()/12,step)
+# levels = np.arange(0,Z.max()/2,200)
+# CS = ax.contour(a1_in, a2_in, Z_in, colors='k', linewidths=(0.75), levels=levels ,zorder=5)
+# CS = ax.contour(a1, a2, Z, colors='k', linewidths=(0.75), levels=levels ,zorder=5)
+CS = ax.contour(a1_in, a2_in, Z_in, colors='k', linewidths=(1) , vmin= Z.min()+0.04, zorder=5)
+# df = pd.DataFrame(data=Z_in, columns=a1_in, index=a2_in)
+# df2 = pd.DataFrame(np.array([[1, 2, 3], [4, 5, 6], [7, 8, 9]]),
+# columns=['a', 'b', 'c'])
# sns.kdeplot(data=df2, x="waiting", y="duration")
# sns.kdeplot(data=df2)
@@ -579,8 +681,32 @@ CS = ax.contour(a1_in, a2_in, Z_in, colors='k', linewidths=(0.5,),zorder=5)
# # CS = ax.contour(tmp1_pos,tmp2_pos, Z_pos,10, cmap=plt.cm.gnuplot, corner_mask=True)
#
# CS = ax.contour(a1, a2, Z,10, colors = 'k')
-ax.clabel(CS, inline=True, fontsize=4)
+# ax.clabel(CS, inline=True, fontsize=4)
+# ax.clabel(CS, inline=True, fontsize=4)
+
+
+# 1- ParameterFAMILY CASE :
+# manual_locations = [
+# (1, 1), (-5, -5), (-10, -10 ),(-12.5,-12.5),(-14,-14), (-15,-15),
+# (5, 5), (10, 10 ),(12.5,12.5), (15,15), (17,17)]
+
+
+
+# GAMMA = inf
+manual_locations = [
+ (1, 1), (-5, -5), (-10, -10 ), (-15,-15),
+ (5, 5), (10, 10 ),(12.5,12.5), (15,15), (17,17)]
+
+#
+#
+# # GAMMA = 0
+# manual_locations = [
+# (1, 1), (-5, -5), (-10, -10 ), (-15,-15), (-15,7),
+# (5, 5), (10, 10 ), (15,15), (17,17)]
+
+# ax.clabel(CS, inline=True, fontsize=f_size, colors='black', manual=manual_locations)
+ax.clabel(CS, inline=True, fontsize=f_size, colors='black')
# cmap = cm.brg(norm(Z))
#
@@ -601,24 +727,43 @@ ax.clabel(CS, inline=True, fontsize=4)
cmap=mpl.cm.RdBu_r
cmap=mpl.cm.viridis_r
# cmap=mpl.cm.bwr
-# cmap=mpl.cm.coolwarm
-cmap=mpl.cm.gnuplot
-# cmap=mpl.cm.cividis
+cmap=mpl.cm.coolwarm
+# cmap=mpl.cm.gnuplot
+cmap=mpl.cm.magma_r
+# cmap=mpl.cm.inferno_r
+# cmap=mpl.cm.plasma
+# cmap=mpl.cm.plasma_r
+# cmap=mpl.cm.cividis_r
# cmap = mpl.colors.LinearSegmentedColormap.from_list("", ["blue","violet","red"])
# cmap = mpl.colors.LinearSegmentedColormap.from_list("", ["blue","orange"])
# cmap = mpl.colors.LinearSegmentedColormap.from_list("", [(0,"red"), (.1,"violet"), (.5, "blue"), (1.0, "green")])
+# make a colormap that has land and ocean clearly delineated and of the
+# same length (256 + 256)
+#
+# colors_undersea = plt.cm.terrain(np.linspace(0, 0.17, 256))
+# colors_land = plt.cm.terrain(np.linspace(0.25, 1, 256))
+# all_colors = np.vstack((colors_undersea, colors_land))
+# # cmap = mcolors.LinearSegmentedColormap.from_list(
+# # 'terrain_map', all_colors)
+
+
+# cmap = px.colors.sequential.agsunset
+# cmap = plotly.colors.PLOTLY_SCALES["Viridis"]
+
+
# cmap = cm.brg(Z)
divnorm=mcolors.TwoSlopeNorm(vmin=Z.min(), vcenter=0., vmax=Z.max())
divnorm=mcolors.TwoSlopeNorm(vmin=Z.min(), vcenter=(Z.max()+Z.min())/2, vmax=Z.max())
-divnorm=mcolors.TwoSlopeNorm(vmin=Z.min(), vcenter=0, vmax=Z.max())
+# divnorm=mcolors.TwoSlopeNorm(vmin=-500, vcenter=0, vmax=Z.max())
+
# divnorm=mcolors.TwoSlopeNorm(vmin=-10, vcenter=0. ,vmax=10)
# divnorm=mcolors.TwoSlopeNorm(vmin=-10, vcenter=0., vmax=Z.max())
-
+# divnorm=mcolors.LogNorm(vmin=Z.min(), vmax=Z.max()) #Test LogNorm
# cmap = cm.brg(divnorm(Z))
@@ -634,8 +779,17 @@ divnorm=mcolors.TwoSlopeNorm(vmin=Z.min(), vcenter=0, vmax=Z.max())
# plt.imshow(Z, extent=[x.min(), x.max(), y.min(), y.max()],origin='lower',
# cmap=cmap, alpha=0.6)
-I = plt.imshow(Z, extent=[x.min(), x.max(), y.min(), y.max()],origin='lower', norm = divnorm,
- cmap=cmap, alpha=0.6)
+# I = plt.imshow(Z, extent=[x.min(), x.max(), y.min(), y.max()],origin='lower', norm = divnorm,
+# cmap=cmap, alpha=0.6)
+plt.imshow(Z, extent=[x.min(), x.max(), y.min(), y.max()],origin='lower', norm = divnorm,
+ cmap=cmap, alpha=0.9)
+# plt.imshow(Z, extent=[x.min(), x.max(), y.min(), y.max()],origin='lower', norm = divnorm,
+# cmap=cmap, alpha=0.6)
+
+
+# I = plt.imshow(Z, extent=[x.min(), x.max(), y.min(), y.max()],origin='lower',
+ # cmap=cmap, alpha=0.6)
+
# I = plt.imshow(Z, extent=[x.min(), x.max(), y.min(), y.max()],origin='lower', norm = mcolors.CenteredNorm(),
# cmap=cmap, alpha=0.6)
@@ -644,7 +798,7 @@ I = plt.imshow(Z, extent=[x.min(), x.max(), y.min(), y.max()],origin='lower', no
# COLORBAR :
# cbar = plt.colorbar()
-# cbar.ax.tick_params(labelsize=6)
+# cbar.ax.tick_params(labelsize=f_size)
# fig.colorbar(I)
@@ -659,8 +813,8 @@ epsilon = 0.2
fillcolor = 'white'
# ax.fill_between([0+epsilon, x.max()], y.min(), 0-epsilon, alpha=0.7, color=fillcolor, zorder=4)#yellow
# ax.fill_between([x.min(), 0-epsilon], 0+epsilon, y.max(), alpha=0.7, color=fillcolor, zorder=4)#yellow
-ax.fill_between([0+epsilon, x.max()], y.min(), 0-epsilon, alpha=1, color=fillcolor, zorder=4)#yellow
-ax.fill_between([x.min(), 0-epsilon], 0+epsilon, y.max(), alpha=1, color=fillcolor, zorder=4)#yellow
+ax.fill_between([0+epsilon, x.max()], y.min(), 0-epsilon, alpha=1.0, color=fillcolor, zorder=4)#yellow
+ax.fill_between([x.min(), 0-epsilon], 0+epsilon, y.max(), alpha=1.0, color=fillcolor, zorder=4)#yellow
# ax.plot_surface(a1,a2, Z, cmap=cm.coolwarm,
# linewidth=0, antialiased=False)
@@ -684,9 +838,17 @@ ax.plot([0,0],ax.get_ylim(), 'k--', linewidth=0.5)
-ax.set_xlabel(r"$a_1$", fontsize=10 ,labelpad=0)
-ax.set_ylabel(r"$a_2$", fontsize=10 ,labelpad=0)
+
+ax.scatter(g_star[0],g_star[1], s=20, zorder=5)
+ax.text(g_star[0]+1,g_star[1]-1, r"$g_*$", color='royalblue', size=15, zorder = 5)
+
+
+ax.set_xlabel(r"$a_1$", fontsize=f_size ,labelpad=0)
+ax.set_ylabel(r"$a_2$", fontsize=f_size ,labelpad=0)
# ax.set_ylabel(r"energy")
+ax.tick_params(axis='both', which='major', labelsize=f_size)
+ax.tick_params(axis='both', which='minor', labelsize=f_size)
+
# ax.set_xticks([-np.pi/2, -np.pi/4 ,0, np.pi/4, np.pi/2 ])
@@ -702,6 +864,7 @@ ax.set_ylabel(r"$a_2$", fontsize=10 ,labelpad=0)
fig.set_size_inches(width, height)
+# fig.set_size_inches(set_size(width, fraction=0.33))
fig.savefig('Energy_ContourG+.pdf')
plt.show()
diff --git a/src/Energy_ContourG+_v3.py b/src/Energy_ContourG+_v3.py
new file mode 100644
index 0000000000000000000000000000000000000000..c829f2fa86d8c66116571ac95d6c6529840f21ae
--- /dev/null
+++ b/src/Energy_ContourG+_v3.py
@@ -0,0 +1,1360 @@
+import numpy as np
+import matplotlib.pyplot as plt
+import sympy as sym
+import math
+import os
+import subprocess
+import fileinput
+import re
+import matlab.engine
+import sys
+from ClassifyMin import *
+from HelperFunctions import *
+# from CellScript import *
+from mpl_toolkits.mplot3d import Axes3D
+import matplotlib.cm as cm
+from vtk.util import numpy_support
+from pyevtk.hl import gridToVTK
+import time
+import matplotlib.ticker as ticker
+
+import matplotlib as mpl
+from matplotlib.ticker import MultipleLocator,FormatStrFormatter,MaxNLocator
+import pandas as pd
+
+import seaborn as sns
+import matplotlib.colors as mcolors
+
+from chart_studio import plotly
+import plotly.graph_objs as go
+import plotly.express as px
+import plotly.colors
+# from matplotlib import rc
+# rc('text', usetex=True) # Use LaTeX font
+#
+# import seaborn as sns
+# sns.set(color_codes=True)
+
+
+def show(fig):
+ import io
+ import plotly.io as pio
+ from PIL import Image
+ buf = io.BytesIO()
+ pio.write_image(fig, buf)
+ img = Image.open(buf)
+ img.show()
+
+
+
+
+# set the colormap and centre the colorbar
+class MidpointNormalize(mcolors.Normalize):
+ """
+ Normalise the colorbar so that diverging bars work there way either side from a prescribed midpoint value)
+
+ e.g. im=ax1.imshow(array, norm=MidpointNormalize(midpoint=0.,vmin=-100, vmax=100))
+ """
+ def __init__(self, vmin=None, vmax=None, midpoint=None, clip=False):
+ self.midpoint = midpoint
+ mcolors.Normalize.__init__(self, vmin, vmax, clip)
+
+ def __call__(self, value, clip=None):
+ # I'm ignoring masked values and all kinds of edge cases to make a
+ # simple example...
+ x, y = [self.vmin, self.midpoint, self.vmax], [0, 0.5, 1]
+ return np.ma.masked_array(np.interp(value, x, y), np.isnan(value))
+
+
+
+def set_size(width, fraction=1):
+ """Set figure dimensions to avoid scaling in LaTeX.
+
+ Parameters
+ ----------
+ width: float
+ Document textwidth or columnwidth in pts
+ fraction: float, optional
+ Fraction of the width which you wish the figure to occupy
+
+ Returns
+ -------
+ fig_dim: tuple
+ Dimensions of figure in inches
+ """
+ # Width of figure (in pts)
+ fig_width_pt = width * fraction
+
+ # Convert from pt to inches
+ inches_per_pt = 1 / 72.27
+
+ # Golden ratio to set aesthetic figure height
+ # https://disq.us/p/2940ij3
+ golden_ratio = (5**.5 - 1) / 2
+
+ # Figure width in inches
+ fig_width_in = fig_width_pt * inches_per_pt
+ # Figure height in inches
+ fig_height_in = fig_width_in * golden_ratio
+
+ fig_dim = (fig_width_in, fig_height_in)
+
+ return fig_dim
+
+
+
+def format_func(value, tick_number):
+ # find number of multiples of pi/2
+ # N = int(np.round(2 * value / np.pi))
+ # if N == 0:
+ # return "0"
+ # elif N == 1:
+ # return r"$\pi/2$"
+ # elif N == -1:
+ # return r"$-\pi/2$"
+ # elif N == 2:
+ # return r"$\pi$"
+ # elif N % 2 > 0:
+ # return r"${0}\pi/2$".format(N)
+ # else:
+ # return r"${0}\pi$".format(N // 2)
+ ##find number of multiples of pi/2
+ N = int(np.round(4 * value / np.pi))
+ if N == 0:
+ return "0"
+ elif N == 1:
+ return r"$\pi/4$"
+ elif N == -1:
+ return r"$-\pi/4$"
+ elif N == 2:
+ return r"$\pi/2$"
+ elif N == -2:
+ return r"$-\pi/2$"
+ elif N % 2 > 0:
+ return r"${0}\pi/2$".format(N)
+ else:
+ return r"${0}\pi$".format(N // 2)
+
+
+
+def find_nearest(array, value):
+ array = np.asarray(array)
+ idx = (np.abs(array - value)).argmin()
+ return array[idx]
+
+
+def find_nearestIdx(array, value):
+ array = np.asarray(array)
+ idx = (np.abs(array - value)).argmin()
+ return idx
+
+
+
+
+def check_case(q1,q2,q12,q3,b1,b2):
+
+ # a = np.array([a1,a2])
+ b = np.array([b1,b2])
+ H = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+ A = np.array([[q1,1/2*q12], [1/2*q12,q2] ])
+
+
+ print('det(H)=', np.linalg.det(H))
+
+ # check if g* is in G^*_R^2
+ tmp = A.dot(b)
+
+ ## compute inverse of H :
+ inv_H = np.linalg.inv(H)
+
+ g_star = 2*inv_H.dot(tmp)
+
+ print('g_star=', g_star)
+
+
+ return g_star
+
+
+def get_gstar(q1,q2,q12,q3,b1,b2):
+
+ # a = np.array([a1,a2])
+ b = np.array([b1,b2])
+ H = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+ A = np.array([[q1,1/2*q12], [1/2*q12,q2] ])
+ print('det(H)=', np.linalg.det(H))
+ # check if g* is in G^*_R^2
+ tmp = A.dot(b)
+ ## compute inverse of H :
+ inv_H = np.linalg.inv(H)
+ g_star = 2*inv_H.dot(tmp)
+ # print('g_star=', g_star)
+
+ return g_star
+
+
+def determine_b(q1,q2,q12,q3,g_star):
+ ##
+ # Input: g_star
+ # Output : b such that g_star is minimizer, i.e A*b = (1/2)*H*g_star
+ # q1=1;
+ # q2=2;
+ # q12=1/2;
+ # q3=((4*q1*q2)**0.5-q12)/2;
+ # H=[2*q1,q12+2*q3;q12+2*q3,2*q2];
+
+
+
+ H = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+ A = np.array([[q1,1/2*q12], [1/2*q12,q2] ])
+ abar = np.array([q12+2*q3, 2*q2])
+ rhs = (1/2)*H.dot(g_star)
+ print('rhs:', rhs)
+ b = np.linalg.lstsq(A, rhs)[0]
+ print('b',b)
+ b1=b[0]
+ b2=b[1]
+
+ return b
+ ## ---------------
+
+
+def get_minimizer(q1,q2,q3,b1,b2):
+
+ # In the case if q12 == 0:
+ quotient = (q1*q2-q3**2)
+ g_star = np.array([(q1*q2*b1-q3*q2*b2)/quotient, (q1*q2*b2-q3*q1*b1)/quotient])
+ print('g_star=', g_star)
+ return g_star
+
+
+def energy(a1,a2,q1,q2,q12,q3,b1,b2):
+
+
+ a = np.array([a1,a2])
+ b = np.array([b1,b2])
+ H = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+ A = np.array([[q1,1/2*q12], [1/2*q12,q2] ])
+
+
+ tmp = H.dot(a)
+
+ # print('H',H)
+ # print('A',A)
+ # print('b',b)
+ # print('a',a)
+ # print('tmp',tmp)
+
+ tmp = (1/2)*a.dot(tmp)
+ # print('tmp',tmp)
+
+ tmp2 = A.dot(b)
+ # print('tmp2',tmp2)
+ tmp2 = 2*a.dot(tmp2)
+
+ # print('tmp2',tmp2)
+ energy = tmp - tmp2
+ # print('energy',energy)
+
+
+ # energy_axial1.append(energy_1)
+
+ return energy
+
+
+
+# def energy(a1,a2,q1,q2,q12,q3,b1,b2):
+#
+#
+# b = np.array([b1,b2])
+# H = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+# A = np.array([[q1,1/2*q12], [1/2*q12,q2] ])
+#
+#
+# tmp = H.dot(a)
+#
+# print('H',H)
+# print('A',A)
+# print('b',b)
+# print('a',a)
+# print('tmp',tmp)
+#
+# tmp = (1/2)*a.dot(tmp)
+# print('tmp',tmp)
+#
+# tmp2 = A.dot(b)
+# print('tmp2',tmp2)
+# tmp2 = 2*a.dot(tmp2)
+#
+# print('tmp2',tmp2)
+# energy = tmp - tmp2
+# print('energy',energy)
+#
+#
+# # energy_axial1.append(energy_1)
+#
+# return energy
+#
+
+
+def draw_1ParameterLine(q1,q2,q12,q3):
+
+ # q1=1;
+ # q2=2;
+ # q12=1/2;
+ # q3=((4*q1*q2)**0.5-q12)/2;
+ # H=[2*q1,q12+2*q3;q12+2*q3,2*q2];
+
+ H = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+ A = np.array([[q1,1/2*q12], [1/2*q12,q2] ])
+ abar = np.array([q12+2*q3, 2*q2])
+ abar = (1.0/math.sqrt((q12+2*q3)**2+(2*q2)**2))*abar
+
+ print('abar:',abar)
+
+ b = np.linalg.lstsq(A, abar)[0]
+ print('b',b)
+
+ b1=b[0]
+ b2=b[1]
+
+
+ # print('abar:',np.shape(abar))
+ # print('np.transpose(abar):',np.shape(np.transpose(abar)))
+ sstar = (1/(q1+q2))*abar.dot(A.dot(b))
+ # sstar = (1/(q1+q2))*abar.dot(tmp)
+ print('sstar', sstar)
+ abarperp= np.array([abar[1],-abar[0]])
+ print('abarperp:',abarperp)
+
+ N=500;
+ scale_domain = 5
+ translate_startpoint = -1.8
+ scale_domain = 4.65
+ translate_startpoint = -1.85
+ # --- FUll LINE:
+ scale_domain = 4.5
+ translate_startpoint = -1.4
+ T_line = np.linspace(-sstar*(q12+2*q3)/(2*q2)*scale_domain + translate_startpoint, sstar*(2*q2)/(q12+2*q3)*scale_domain , num=N)
+ line_values = []
+ for t in T_line :
+ print('sstar*abar+t*abarperp', sstar*abar+t*abarperp)
+ line_values.append(sstar*abar+t*abarperp)
+ # ------
+
+
+ T = np.linspace(-sstar*(q12+2*q3)/(2*q2), sstar*(2*q2)/(q12+2*q3), num=N)
+ # T = np.linspace(-sstar*(q12+2*q3)/(2*q2)*scale_domain + translate_startpoint, sstar*(2*q2)/(q12+2*q3)*scale_domain , num=N)
+ # T = np.linspace(-2,2, num=N)
+ # print('T:', T)
+
+ print('T.min():', T.min())
+ print('T.max():', T.max())
+
+ kappas = []
+ alphas = []
+ # G.append(float(s[0]))
+
+ G_container = []
+ abar_container = []
+
+
+ abar_tmp = abar
+
+ for t in T :
+ abar_current = sstar*abar+t*abarperp;
+ abar_current[abar_current < 1e-10] = 0 # Project to x-y-axis!!
+ current_energy = energy(abar_current[0],abar_current[1],q1,q2,q12,q3,b1,b2)
+ print('energy along line:', current_energy )
+ G = [abar_current[0], abar_current[1] , (2*abar_current[0]*abar_current[1])**0.5 ]
+ G_container.append(G)
+ abar_container.append(abar_current)
+ e = [(abar_current[0]/(abar_current[0]+abar_current[1]))**0.5, (abar_current[1]/(abar_current[0]+abar_current[1]))**0.5]
+ kappa = abar_current[0]+abar_current[1]
+ alpha = math.atan2(e[1], e[0])
+ kappas.append(kappa)
+ alphas.append(alpha)
+
+
+ alphas = np.array(alphas)
+ kappas = np.array(kappas)
+
+ # print('G_container', G_container)
+ G = np.array(G_container)
+ abar = np.array(abar_container)
+
+ # print('G', G)
+ # print('abar', abar)
+ # print('abar.shape',abar.shape)
+ line = ax.plot(abar[:,0],abar[:,1], linewidth=2, color='royalblue', linestyle='-', zorder=4)
+
+ # Plot 1-Parameter Line
+ line_values= np.array(line_values)
+ ax.plot(line_values[:,0],line_values[:,1],'k--', linewidth=1,color='royalblue',alpha=0.8,zorder=4)
+
+ return line
+
+
+
+
+################################################################################################################
+################################################################################################################
+################################################################################################################
+
+InputFile = "/inputs/computeMuGamma.parset"
+OutputFile = "/outputs/outputMuGamma.txt"
+# --------- Run from src folder:
+path_parent = os.path.dirname(os.getcwd())
+os.chdir(path_parent)
+path = os.getcwd()
+print(path)
+InputFilePath = os.getcwd()+InputFile
+OutputFilePath = os.getcwd()+OutputFile
+print("InputFilepath: ", InputFilePath)
+print("OutputFilepath: ", OutputFilePath)
+print("Path: ", path)
+
+print('---- Input parameters: -----')
+
+# q1=1;
+# q2=2;
+# q12=1/2;
+# q3=((4*q1*q2)**0.5-q12)/2;
+# # H=[2*q1,q12+2*q3;q12+2*q3,2*q2];
+#
+# H = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+# A = np.array([[q1,1/2*q12], [1/2*q12,q2] ])
+# abar = np.array([q12+2*q3, 2*q2])
+# abar = (1.0/math.sqrt((q12+2*q3)**2+(2*q2)**2))*abar
+#
+# print('abar:',abar)
+#
+# b = np.linalg.lstsq(A, abar)[0]
+# print('b',b)
+#
+#
+# # print('abar:',np.shape(abar))
+# # print('np.transpose(abar):',np.shape(np.transpose(abar)))
+# sstar = (1/(q1+q2))*abar.dot(A.dot(b))
+# # sstar = (1/(q1+q2))*abar.dot(tmp)
+# print('sstar', sstar)
+# abarperp= np.array([abar[1],-abar[0]])
+# print('abarperp:',abarperp)
+
+
+# -------------------------- Input Parameters --------------------
+#
+# mu1 = 1.0
+# rho1 = 1.0
+# alpha = 5.0
+# theta = 1.0/2
+# # theta= 0.1
+# beta = 5.0
+#
+
+
+
+# mu1 = 1.0
+# rho1 = 1.0
+# alpha = -0.75
+# theta = 1.0/2
+# # theta= 0.1
+# beta = 5.0
+
+
+# mu1 = 1.0
+# rho1 = 1.0
+# alpha = 2.0
+# theta = 1.0/2
+# # theta= 0.1
+# beta = 5.0
+
+
+#Figure3:
+# mu1 = 1.0
+# rho1 = 1.0
+# alpha = 2.0
+# theta = 1.0/8
+# # theta= 0.1
+# beta = 2.0
+
+
+# alpha= -5
+
+
+#set gamma either to 1. '0' 2. 'infinity' or 3. a numerical positive value
+# gamma = '0'
+# # gamma = 'infinity'
+#
+#
+# lambda1 = 0.0
+
+
+print('---- Input parameters: -----')
+# print('mu1: ', mu1)
+# print('rho1: ', rho1)
+# # print('alpha: ', alpha)
+# print('beta: ', beta)
+# # print('theta: ', theta)
+# print('gamma:', gamma)
+#
+# print('lambda1: ', lambda1)
+print('----------------------------')
+# ----------------------------------------------------------------
+print('----------------------------')
+
+# ----------------------------------------------------------------
+
+
+
+
+
+
+# q1 = (1.0/6.0)*harmonicMean(mu1, beta, theta)
+# q2 = (1.0/6.0)*arithmeticMean(mu1, beta, theta)
+# q12 = 0.0
+# q3 = GetMuGamma(beta, theta,gamma,mu1,rho1,InputFilePath ,OutputFilePath )
+# b1 = prestrain_b1(rho1,beta, alpha, theta )
+# b2 = prestrain_b2(rho1,beta, alpha, theta )
+#
+
+
+case = 'a'
+case = 'b'
+# case = 'c'
+
+
+
+if case == 'a':
+ print('---- CASE (a) ----')
+ q1 = 1
+ q2 = 2
+ q12 = 0
+ q3 = 1
+ g_star = np.array([0,1])
+ g_star = np.array([-1,1])
+ # ToDO
+ b = determine_b(q1,q2,q12,q3, g_star)
+ b1 = b[0]
+ b2 = b[1]
+
+
+if case == 'b':
+ print('---- CASE (b) ----')
+ q1 = 1
+ q2 = 2
+ q12 = 0
+ q3 = 1
+ g_star = np.array([1,1])
+ # ToDO
+ b = determine_b(q1,q2,q12,q3, g_star)
+ b1 = b[0]
+ b2 = b[1]
+
+
+if case == 'c':
+ print('---- CASE (c) ----')
+ ## ---- 1-ParameterFamilyCase:
+ q1=1;
+ q2=2;
+ q12=1/2;
+ q3=((4*q1*q2)**0.5-q12)/2;
+ # H=[2*q1,q12+2*q3;q12+2*q3,2*q2];
+ H = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+ A = np.array([[q1,1/2*q12], [1/2*q12,q2] ])
+ abar = np.array([q12+2*q3, 2*q2])
+ abar = (1.0/math.sqrt((q12+2*q3)**2+(2*q2)**2))*abar
+ print('abar:',abar)
+ b = np.linalg.lstsq(A, abar)[0]
+ print('b',b)
+ b1=b[0]
+ b2=b[1]
+ ## ---------------
+
+
+
+
+print('q1 = ', q1)
+print('q2 = ', q2)
+print('q3 = ', q3)
+print('q12 = ', q12)
+print('b1 = ', b1)
+print('b2 = ', b2)
+
+## --- CHECK CASE ---
+
+
+if case == 'a':
+ # Check Minimizers:
+ vec1 = np.array([(2*q1*b1+q12*b2)/(2*q1), 0])
+ vec2 = np.array([0, (2*q12*b1+q2*b2)/(2*q2)])
+ print('vec1:',vec1)
+ print('vec2:',vec2)
+ energy_1 = energy(vec1[0],vec1[1],q1,q2,q12,q3,b1,b2)
+ energy_2 = energy(vec2[0],vec2[1],q1,q2,q12,q3,b1,b2)
+ print('energy_1:',energy_1)
+ print('energy_2:',energy_2)
+ if energy_1 >= energy_2:
+ minvec = vec2
+ else:
+ minvec = vec1
+ print('minvec:', minvec)
+
+
+
+
+check_case(q1,q2,q12,q3,b1,b2)
+
+g_star = get_gstar(q1,q2,q12,q3,b1,b2)
+print('g_star:',g_star)
+
+# TEST
+print('special case g_star:')
+get_minimizer(q1,q2,q3,b1,b2)
+
+
+
+
+## -------------------------------------
+
+num_Points = 400
+# num_Points = 600
+# num_Points = 200
+# num_Points = 100
+# num_Points = 20
+
+
+# Creating dataset
+x = np.linspace(-5,5,num_Points)
+y = np.linspace(-5,5,num_Points)
+
+x = np.linspace(-20,20,num_Points)
+y = np.linspace(-20,20,num_Points)
+
+
+x = np.linspace(-2,2,num_Points)
+y = np.linspace(-2,2,num_Points)
+# x = np.linspace(-10,10,num_Points)
+# y = np.linspace(-10,10,num_Points)
+
+# x = np.linspace(-60,60,num_Points)
+# y = np.linspace(-60,60,num_Points)
+#
+#
+# x = np.linspace(-40,40,num_Points)
+# y = np.linspace(-40,40,num_Points)
+
+
+a1, a2 = np.meshgrid(x,y)
+
+# geyser = sns.load_dataset("geyser")
+# print('type of geyser:', type(geyser))
+# print('geyser:',geyser)
+
+# ContourRange=20
+ContourRange=2
+
+# x_in = np.linspace(-ContourRange,ContourRange,num_Points)
+# y_in = np.linspace(-ContourRange,ContourRange,num_Points)
+# a1_in, a2_in = np.meshgrid(x_in,y_in)
+
+print('a1:', a1)
+print('a2:',a2 )
+print('a1.shape', a1.shape)
+
+#-- FILTER OUT VALUES for G+ :
+
+# tmp1 = a1[np.where(a1*a2 >= 0)]
+# tmp2 = a2[np.where(a1*a2 >= 0)]
+#
+# np.take(a, np.where(a>100)[0], axis=0)
+# tmp1 = np.take(a1, np.where(a1*a2 >= 0)[0], axis=0)
+# tmp2 = np.take(a1, np.where(a1*a2 >= 0)[0], axis=0)
+# tmp2 = a2[np.where(a1*a2 >= 0)]
+
+tmp1 = a1[a1*a2 >= 0]
+tmp2 = a2[a1*a2 >= 0]
+tmp1 = tmp1.reshape(-1,5)
+tmp2 = tmp2.reshape(-1,5)
+
+
+# tmp1_pos = a1[np.where(a1*a2 >= 0) ]
+# tmp2_pos = a2[np.where(a1*a2 >= 0) ]
+# tmp1_pos = tmp1_pos[np.where(tmp1_pos >= 0)]
+# tmp2_pos = tmp2_pos[np.where(tmp2_pos >= 0)]
+#
+# tmp1_neg = a1[a1*a2 >= 0 ]
+# tmp2_neg = a2[a1*a2 >= 0 ]
+# tmp1_neg = tmp1_neg[tmp1_neg < 0]
+# tmp2_neg = tmp2_neg[tmp2_neg < 0]
+# a1 = tmp1
+# a2 = tmp2
+#
+# a1 = a1.reshape(-1,5)
+# a2 = a2.reshape(-1,5)
+#
+# tmp1_pos = tmp1_pos.reshape(-1,5)
+# tmp2_pos = tmp2_pos.reshape(-1,5)
+# tmp1_neg = tmp1_neg.reshape(-1,5)
+# tmp2_neg = tmp2_neg.reshape(-1,5)
+
+
+# print('a1:', a1)
+# print('a2:',a2 )
+# print('a1.shape', a1.shape)
+
+
+
+
+
+energyVec = np.vectorize(energy)
+
+# Z = energyVec(np.array([a1,a2]),q1,q2,q12,q3,b1,b2)
+Z = energyVec(a1,a2,q1,q2,q12,q3,b1,b2)
+
+# Z_in = energyVec(a1_in,a2_in,q1,q2,q12,q3,b1,b2)
+
+
+
+
+print('Z:', Z)
+print('any', np.any(Z<0))
+
+
+
+
+
+
+
+# negZ_a1 = a1[np.where(Z<0)]
+# negZ_a2 = a2[np.where(Z<0)]
+# negativeValues = Z[np.where(Z<0)]
+# print('negativeValues:',negativeValues)
+#
+# print('negZ_a1',negZ_a1)
+# print('negZ_a2',negZ_a2)
+#
+#
+# negZ_a1 = negZ_a1.reshape(-1,5)
+# negZ_a2 = negZ_a2.reshape(-1,5)
+# negativeValues = negativeValues.reshape(-1,5)
+#
+# Z_pos = energyVec(tmp1_pos,tmp2_pos,q1,q2,q12,q3,b1,b2)
+# Z_neg = energyVec(tmp1_neg,tmp2_neg,q1,q2,q12,q3,b1,b2)
+
+
+
+
+
+# print('Test energy:' , energy(np.array([1,1]),q1,q2,q12,q3,b1,b2))
+
+
+
+
+# print('Z_pos.shape', Z_pos.shape)
+
+
+
+
+
+
+
+## -- PLOT :
+mpl.rcParams['text.usetex'] = True
+mpl.rcParams["font.family"] = "serif"
+mpl.rcParams["font.size"] = "9"
+
+label_size = 8
+mpl.rcParams['xtick.labelsize'] = label_size
+mpl.rcParams['ytick.labelsize'] = label_size
+
+# plt.style.use('seaborn')
+# plt.style.use('seaborn-whitegrid')
+# sns.set()
+# plt.style.use('seaborn-whitegrid')
+
+label_size = 9
+mpl.rcParams['xtick.labelsize'] = label_size
+mpl.rcParams['ytick.labelsize'] = label_size
+
+width = 6.28 *0.5
+# width = 6.28 *0.33
+# width = 6.28
+height = width #/ 1.618
+
+# width = 452.9579/2
+# size= set_size(width, fraction=0.5)
+# print('set_size(width, fraction=0.5)', set_size(width, fraction=1))
+# print('size[0]',size[0])
+
+f_size = 10
+# fig= plt.figure()
+fig, ax = plt.subplots()
+# fig.set_size_inches(width, height)
+# fig.set_size_inches(set_size(width, fraction=0.5))
+# ax = plt.axes(projection ='3d', adjustable='box')
+# ax = plt.axes((0.17,0.21 ,0.75,0.75))
+
+# ax = plt.axes((0.17,0.23 ,0.7,0.7))
+# ax = plt.axes((0.17,0.23 ,1.0,1.0))
+# ax=plt.axes()
+# ax = plt.axes((0.15,0.18,0.8,0.8))
+# ax.tick_params(axis='x',which='major', direction='out',pad=5)
+# ax.tick_params(axis='y',which='major', length=3, width=1, direction='out',pad=3)
+# ax.xaxis.set_major_locator(MultipleLocator(0.1))
+# ax.xaxis.set_minor_locator(MultipleLocator(0.05))
+# ax.xaxis.set_major_locator(plt.MultipleLocator(np.pi / 8))
+# ax.xaxis.set_minor_locator(plt.MultipleLocator(np.pi / 16))
+# ax.xaxis.set_major_locator(plt.MultipleLocator(np.pi / 2))
+# ax.xaxis.set_minor_locator(plt.MultipleLocator(np.pi / 4))
+# ax.xaxis.set_major_formatter(plt.FuncFormatter(format_func))
+# ax.grid(True,which='major',axis='both',alpha=0.3)
+
+# colorfunction=(B*kappa)
+# print('colofunction',colorfunction)
+
+#translate Data
+# Z = Z - (Z.max()-Z.min())/2
+# Z = Z - 50
+# Z = Z - 500
+#
+# Z = Z.T
+
+
+# Substract constant:
+# c = (b1**2)*q1+b1*b2*q12+(b2**2)*q2
+# Z = Z-c
+#
+# print('Value of c:', c)
+
+
+
+print('Z.min()', Z.min())
+print('Z.max()', Z.max())
+norm=mcolors.Normalize(Z.min(),Z.max())
+# facecolors=cm.brg(norm)
+
+
+
+print('norm:', norm)
+print('type of norm', type(norm))
+print('norm(0):', norm(0))
+print('norm(Z):', norm(Z))
+
+# ax.plot(theta_rho, theta_values, 'royalblue', zorder=3, )
+
+# ax.scatter(a1,a2, s=0.5)
+
+# ax.scatter(tmp1_pos,tmp2_pos, s=0.5)
+# ax.scatter(tmp1_neg,tmp2_neg, s=0.5)
+
+# CS = ax.contour(a1, a2, Z,10, cmap=plt.cm.gnuplot, levels=100 )
+# CS = ax.contour(a1, a2, Z,10, cmap=plt.cm.gnuplot, levels=20 )
+
+
+# sns.kdeplot(np.array([a1, a2, Z]))
+# sns.kdeplot(tmp1_pos,tmp2_pos,Z_pos)
+
+# levels = [-5.0, -4, -3, 0.0, 1.5, 2.5, 3.5]
+# CS = ax.contour(a1, a2, Z,10, cmap=plt.cm.gnuplot, corner_mask=True,levels=levels)
+# CS = ax.contour(a1, a2, Z, cmap=plt.cm.gnuplot(norm(Z)), corner_mask=True)
+# CS = ax.contour(a1, a2, Z, cm.brg(norm(Z)), levels=20)
+# CS = ax.contour(a1, a2, Z, cmap=plt.cm.gnuplot, levels=20)
+# CS = ax.contour(a1, a2, Z, colors='k', levels=14, linewidths=(0.5,))
+# CS = ax.contour(a1, a2, Z, colors='k', levels=18, linewidths=(0.5,))
+
+# ax.contour(negZ_a1, negZ_a2, negativeValues, colors='k', linewidths=(0.5,))
+# CS = ax.contour(a1_in, a2_in, Z_in, colors='k', linewidths=(0.75) ,zorder=5)
+
+
+step = (-1)*Z.min()
+# step = 3.0
+
+levels = np.arange(Z.min(),Z.max()/2,step)
+# evels = np.arange(-4, 25, 4)
+# levels = np.arange(-3, 23, 4)
+
+# levels = np.arange(Z.min(),Z.max()/12,step)
+# levels = np.arange(Z.min(),Z.max(),step)
+# levels = np.arange(0,Z.max()/2,200)
+# CS = ax.contour(a1_in, a2_in, Z_in, colors='k', linewidths=(0.75), levels=levels ,zorder=5)
+
+# CS = ax.contour(a1, a2, Z, colors='k', linewidths=(0.75), levels=levels ,zorder=5)
+# CS = ax.contour(a1, a2, Z,5, colors='k', linewidths=(0.75) ,zorder=5, vmin=Z.min(), vmax=1)
+
+# CS = ax.contour(a1, a2, Z,5, colors='k', linewidths=(0.75) ,zorder=5, vmin=Z.min(), vmax=1)
+
+if case == 'b':
+ levels = np.arange(-4, 25, 4)
+
+
+if case == 'a':
+ levels = np.arange(-1, 25, 5) # if g_star = [0 1]
+ levels = np.arange(0, 24, 4) # if g_star = [-1 1]
+if case == 'c':
+ levels = np.arange(0, 25, 4)
+
+CS = ax.contour(a1, a2, Z,levels, colors='k',linewidths=(0.75), extent=(-2, 2, -2, 2), zorder=5)
+
+
+# CS = ax.contour(a1 , a2 , Z, colors='k', linewidths=(0.75), zorder=5)
+# CS = ax.contour(a1_in, a2_in, Z_in, colors='k', linewidths=(1) , vmin= Z.min()+0.04, zorder=5)
+# CS = ax.contour(a1, a2, Z, colors='k', linewidths=(1) , vmin= Z.min()+0.04, zorder=5)
+
+
+
+# df = pd.DataFrame(data=Z_in, columns=a1_in, index=a2_in)
+# df2 = pd.DataFrame(np.array([[1, 2, 3], [4, 5, 6], [7, 8, 9]]),
+# columns=['a', 'b', 'c'])
+
+# sns.kdeplot(data=df2, x="waiting", y="duration")
+# sns.kdeplot(data=df2)
+
+# CS = ax.contour(a1, a2, Z, colors='k', linewidths=(0.5,))
+
+# CS = ax.contour(a1, a2, Z,10, cmap=plt.cm.gnuplot, extend='both', levels=50)
+# CS = ax.contourf(a1, a2, Z,10, colors='k', extend='both', levels=50)
+# CS = ax.contourf(a1, a2, Z,10, colors='k')
+#
+# # CS = ax.contour(tmp1_pos,tmp2_pos, Z_pos,10, cmap=plt.cm.gnuplot, levels=10 )
+# # CS = ax.contour(tmp1_pos,tmp2_pos, Z_pos,10, cmap=plt.cm.gnuplot, corner_mask=True)
+#
+# CS = ax.contour(a1, a2, Z,10, colors = 'k')
+# ax.clabel(CS, inline=True, fontsize=4)
+
+# ax.clabel(CS, inline=True, fontsize=4)
+
+
+# 1- ParameterFAMILY CASE :
+# manual_locations = [
+# (1, 1), (-5, -5), (-10, -10 ),(-12.5,-12.5),(-14,-14), (-15,-15),
+# (5, 5), (10, 10 ),(12.5,12.5), (15,15), (17,17)]
+
+
+if case == 'c':
+ manual_locations = [
+ (1, 1), (0.5, 0.5),(1.5,1.5),(1.75,1.75),(-0.2,0.2), (-0.5,-0.5),
+ (-1,-1),(-1.25,-1.25), (-1.5,-1.5)]
+ ax.clabel(CS, inline=True, fontsize=9, colors='black', manual=manual_locations)
+else :
+ ax.clabel(CS, inline=True, fontsize=9, colors='black', zorder=5)
+
+# GAMMA = inf
+# manual_locations = [
+# (1, 1), (-5, -5), (-10, -10 ), (-15,-15),
+# (5, 5), (10, 10 ),(12.5,12.5), (15,15), (17,17)]
+
+#
+#
+# # GAMMA = 0
+# manual_locations = [
+# (1, 1), (-5, -5), (-10, -10 ), (-15,-15), (-15,7),
+# (5, 5), (10, 10 ), (15,15), (17,17)]
+
+
+# ax.clabel(CS, inline=True, fontsize=f_size, colors='black')
+# ax.clabel(CS, inline=True, fontsize=9, colors='black', zorder=5)
+
+# cmap = cm.brg(norm(Z))
+#
+# C_map = cm.inferno(norm(Z))
+
+# ax.imshow(Z, cmap=C_map, extent=[-20, 20, -20, 20], origin='lower', alpha=0.5)
+
+# ax.imshow(norm(Z), extent=[-20, 20, -20, 20], origin='lower',
+# cmap='bwr', alpha=0.8)
+
+# ax.imshow(norm(Z), extent=[-20, 20, -20, 20],origin='lower', vmin=Z.min(), vmax=Z.max(),
+# cmap='bwr', alpha=0.6)
+
+# ax.imshow(norm(Z), extent=[-20, 20, -20, 20],origin='lower', norm = norm,
+# cmap='coolwarm', alpha=0.6)
+
+
+cmap=mpl.cm.RdBu_r
+cmap=mpl.cm.viridis_r
+# cmap=mpl.cm.bwr
+cmap=mpl.cm.coolwarm
+# cmap=mpl.cm.gnuplot
+cmap=mpl.cm.magma_r
+# cmap=mpl.cm.inferno_r
+# cmap=mpl.cm.plasma
+# cmap=mpl.cm.plasma_r
+# cmap=mpl.cm.cividis_r
+# cmap = mpl.colors.LinearSegmentedColormap.from_list("", ["blue","violet","red"])
+# cmap = mpl.colors.LinearSegmentedColormap.from_list("", ["blue","orange"])
+
+# cmap = mpl.colors.LinearSegmentedColormap.from_list("", [(0,"red"), (.1,"violet"), (.5, "blue"), (1.0, "green")])
+# make a colormap that has land and ocean clearly delineated and of the
+# same length (256 + 256)
+#
+# colors_undersea = plt.cm.terrain(np.linspace(0, 0.17, 256))
+# colors_land = plt.cm.terrain(np.linspace(0.25, 1, 256))
+# all_colors = np.vstack((colors_undersea, colors_land))
+# # cmap = mcolors.LinearSegmentedColormap.from_list(
+# # 'terrain_map', all_colors)
+
+
+# cmap = px.colors.sequential.agsunset
+# cmap = plotly.colors.PLOTLY_SCALES["Viridis"]
+
+
+
+
+
+# cmap = cm.brg(Z)
+divnorm=mcolors.TwoSlopeNorm(vmin=Z.min(), vcenter=0., vmax=Z.max())
+divnorm=mcolors.TwoSlopeNorm(vmin=Z.min(), vcenter=(Z.max()+Z.min())/2, vmax=Z.max())
+# divnorm=mcolors.TwoSlopeNorm(vmin=-500, vcenter=0, vmax=Z.max())
+
+# divnorm=mcolors.TwoSlopeNorm(vmin=-10, vcenter=0. ,vmax=10)
+# divnorm=mcolors.TwoSlopeNorm(vmin=-10, vcenter=0., vmax=Z.max())
+
+# divnorm=mcolors.LogNorm(vmin=Z.min(), vmax=Z.max()) #Test LogNorm
+
+# cmap = cm.brg(divnorm(Z))
+
+# ax.imshow(Z, extent=[-20, 20, -20, 20],origin='lower', norm = norm,
+# cmap='coolwarm', alpha=0.6)
+
+# ax.imshow(Z, extent=[-20, 20, -20, 20],origin='lower',
+# cmap='coolwarm', alpha=0.6)
+# ax.imshow(Z, extent=[-20, 20, -20, 20],origin='lower',
+# cmap=cmap, alpha=0.6)
+
+# divnorm=mcolors.TwoSlopeNorm(vmin=Z.min(), vcenter=0., vmax=Z.max())
+# plt.imshow(Z, extent=[x.min(), x.max(), y.min(), y.max()],origin='lower',
+# cmap=cmap, alpha=0.6)
+
+# I = plt.imshow(Z, extent=[x.min(), x.max(), y.min(), y.max()],origin='lower', norm = divnorm,
+# cmap=cmap, alpha=0.6)
+plt.imshow(Z, extent=[x.min(), x.max(), y.min(), y.max()],origin='lower', norm = divnorm,
+ cmap=cmap, alpha=0.9)
+# plt.imshow(Z, extent=[x.min(), x.max(), y.min(), y.max()],origin='lower', norm = divnorm,
+# cmap=cmap, alpha=0.6)
+
+
+# I = plt.imshow(Z, extent=[x.min(), x.max(), y.min(), y.max()],origin='lower',
+ # cmap=cmap, alpha=0.6)
+
+
+# I = plt.imshow(Z, extent=[x.min(), x.max(), y.min(), y.max()],origin='lower', norm = mcolors.CenteredNorm(),
+# cmap=cmap, alpha=0.6)
+
+
+
+# COLORBAR :
+# cbar = plt.colorbar()
+# cbar.ax.tick_params(labelsize=f_size)
+# fig.colorbar(I)
+
+
+
+##----- ADD RECTANGLE TO COVER QUADRANT :
+epsilon = 0.4
+epsilon = 0.2
+epsilon = 0.005
+epsilon = 0.01
+# ax.axvspan(0, x.max(), y.min(), 0, alpha=1, color='yellow', zorder=5)#yellow
+# ax.fill_between([0, x.max()], y.min(), 0, alpha=0.3, color='yellow', zorder=5)#yellow
+# ax.fill_between([x.min(), 0], 0, y.max(), alpha=0.3, color='yellow', zorder=5)#yellow
+
+fillcolor = 'white'
+# ax.fill_between([0+epsilon, x.max()], y.min(), 0-epsilon, alpha=0.7, color=fillcolor, zorder=4)#yellow
+# ax.fill_between([x.min(), 0-epsilon], 0+epsilon, y.max(), alpha=0.7, color=fillcolor, zorder=4)#yellow
+ax.fill_between([0+epsilon, x.max()-epsilon], y.min()+epsilon, 0-epsilon, alpha=1.0, color=fillcolor, zorder=4)#yellow
+ax.fill_between([x.min()+epsilon, 0-epsilon], 0+epsilon, y.max()-epsilon, alpha=1.0, color=fillcolor, zorder=4)#yellow
+
+# ax.plot_surface(a1,a2, Z, cmap=cm.coolwarm,
+# linewidth=0, antialiased=False)
+
+
+
+# ax.plot(theta_rho, energy_axial1, 'royalblue', zorder=3, label=r"axialMin1")
+# ax.plot(theta_rho, energy_axial2, 'forestgreen', zorder=3, label=r"axialMin2")
+# ax.plot(-1.0*alphas, kappas, 'red', zorder=3, )
+
+if case == 'a':
+ # PLOT MINIMIZER g*:
+ # ax.scatter(g_star[0],g_star[1], s=20, zorder=5)
+ # ax.scatter(g_star[0],g_star[1], marker = 'x', s=20, zorder=5)
+ # ax.text(g_star[0]+0.1,g_star[1]-0.1, r"$g_*$", color='royalblue', size=15, zorder = 5)
+ ax.scatter(g_star[0],g_star[1], marker = 'x', s=40, color='gray', zorder=4)
+ ax.text(g_star[0]+0.15,g_star[1]-0.15, r"$g_*$", color='gray', size=12, alpha=0.8, zorder = 5)
+if case == 'b':
+ # PLOT MINIMIZER g*:
+ ax.scatter(g_star[0],g_star[1], s=20, color='royalblue', zorder=5)
+ ax.scatter(g_star[0],g_star[1], marker = 'x', s=40, color='gray', zorder=4)
+ ax.text(g_star[0]+0.15,g_star[1]-0.15, r"$g_*$", color='gray', size=12, alpha=0.8, zorder = 5)
+if case == 'c':
+ print('draw Line')
+ line = draw_1ParameterLine(q1,q2,q12,q3)
+
+
+# lg = ax.legend(bbox_to_anchor=(0.0, 0.75), loc='upper left')
+
+if case == 'c':
+ # draw MINIMAL VALUES
+ print('np.where(Z == Z.min())',np.where(np.round(Z,6) == np.round(Z.min(),6)))
+ tmp_x = a1[np.where(np.round(Z,6) == np.round(Z.min(),6))]
+ tmp_y = a2[np.where(np.round(Z,6) == np.round(Z.min(),6))]
+ ax.scatter(tmp_x,tmp_y,color='red', zorder=5, s=1)
+ # ax.plot(tmp_x,tmp_y,color='forestgreen', zorder=5)
+
+# print('np.where(Z == Z.min())',np.where(np.round(Z,8) == np.round(Z.min(),8)))
+
+
+if case == 'a':
+ ax.scatter(minvec[0],minvec[1],color='royalblue',zorder=5, s=20)
+
+
+### PLot x and y- Axes
+ax.plot(ax.get_xlim(),[0,0],'k--', linewidth=0.5, zorder=4)
+ax.plot([0,0],ax.get_ylim(), 'k--', linewidth=0.5, zorder=4)
+
+
+
+
+
+
+ax.set_xlabel(r"$a_1$", fontsize=f_size ,labelpad=0)
+ax.set_ylabel(r"$a_2$", fontsize=f_size ,labelpad=0)
+# ax.set_ylabel(r"energy")
+ax.tick_params(axis='both', which='major', labelsize=f_size)
+ax.tick_params(axis='both', which='minor', labelsize=f_size)
+
+
+
+# ax.set_xticks([-np.pi/2, -np.pi/4 ,0, np.pi/4, np.pi/2 ])
+# labels = ['$0$',r'$\pi/8$', r'$\pi/4$' ,r'$3\pi/8$' , r'$\pi/2$']
+# ax.set_yticklabels(labels)
+
+
+# plt.subplots_adjust(left = 0.25 )
+
+
+# ax.legend(loc='upper right')
+
+fig.subplots_adjust(left=.18, bottom=.12, right=.90, top=.97)
+
+fig.set_size_inches(width, height)
+# fig.set_size_inches(set_size(width, fraction=0.33))
+Outputname = 'Energy_ContourG+_case'+ str(case) + '.pdf'
+fig.savefig(Outputname)
+
+plt.show()
+
+
+#
+#
+#
+# # Curve parametrised by \theta_rho = alpha in parameter space
+# N=100;
+# theta_rho = np.linspace(1, 3, num=N)
+# print('theta_rho:', theta_rho)
+#
+#
+# theta_values = []
+#
+#
+# for t in theta_rho:
+#
+# s = (1.0/10.0)*t+0.1
+# theta_values.append(s)
+#
+#
+#
+#
+#
+# theta_rho = np.array(theta_rho)
+# theta_values = np.array(theta_values)
+#
+# betas_ = 2.0
+#
+
+# alphas, betas, thetas = np.meshgrid(theta_rho, betas_, theta_values, indexing='ij')
+#
+#
+# harmonicMeanVec = np.vectorize(harmonicMean)
+# arithmeticMeanVec = np.vectorize(arithmeticMean)
+# prestrain_b1Vec = np.vectorize(prestrain_b1)
+# prestrain_b2Vec = np.vectorize(prestrain_b2)
+#
+# GetMuGammaVec = np.vectorize(GetMuGamma)
+# muGammas = GetMuGammaVec(betas,thetas,gamma,mu1,rho1,InputFilePath ,OutputFilePath )
+#
+# q1_vec = harmonicMeanVec(mu1, betas, thetas)
+# q2_vec = arithmeticMeanVec(mu1, betas, thetas)
+#
+# b1_vec = prestrain_b1Vec(rho1, betas, alphas, thetas)
+# b2_vec = prestrain_b2Vec(rho1, betas, alphas, thetas)
+
+# special case: q12 == 0!! .. braucht eigentlich nur b1 & b2 ...
+
+# print('type b1_values:', type(b1_values))
+
+
+
+# print('size(q1)',q1.shape)
+#
+#
+# energy_axial1 = []
+# energy_axial2 = []
+#
+# # for b1 in b1_values:
+# for i in range(len(theta_rho)):
+# print('index i:', i)
+#
+# print('theta_rho[i]',theta_rho[i])
+# print('theta_values[i]',theta_values[i])
+#
+# q1 = (1.0/6.0)*harmonicMean(mu1, beta, theta_values[i])
+# q2 = (1.0/6.0)*arithmeticMean(mu1, beta, theta_values[i])
+# q12 = 0.0
+# q3 = GetMuGamma(beta, theta_values[i],gamma,mu1,rho1,InputFilePath ,OutputFilePath )
+# b1 = prestrain_b1(rho1,beta, theta_rho[i],theta_values[i] )
+# b2 = prestrain_b2(rho1,beta, theta_rho[i],theta_values[i] )
+#
+#
+# # q2_vec = arithmeticMean(mu1, betas, thetas)
+# #
+# # b1_vec = prestrain_b1Vec(rho1, betas, alphas, thetas)
+# # b2_vec = prestrain_b2Vec(rho1, betas, alphas, thetas)
+# print('q1[i]',q1)
+# print('q2[i]',q2)
+# print('q3[i]',q3)
+# print('b1[i]',b1)
+# print('b2[i]',b2)
+# # print('q1[i]',q1[0][i])
+# # print('q2[i]',q2[i])
+# # print('b1[i]',b1[i])
+# # print('b2[i]',b2[i])
+# #compute axial energy #1 ...
+#
+# a_axial1 = np.array([b1,0])
+# a_axial2 = np.array([0,b2])
+# b = np.array([b1,b2])
+#
+# H = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+# A = np.array([[q1,1/2*q12], [1/2*q12,q2] ])
+#
+#
+# tmp = H.dot(a_axial1)
+#
+# print('H',H)
+# print('A',A)
+# print('b',b)
+# print('a_axial1',a_axial1)
+# print('tmp',tmp)
+#
+# tmp = (1/2)*a_axial1.dot(tmp)
+# print('tmp',tmp)
+#
+# tmp2 = A.dot(b)
+# print('tmp2',tmp2)
+# tmp2 = 2*a_axial1.dot(tmp2)
+#
+# print('tmp2',tmp2)
+# energy_1 = tmp - tmp2
+# print('energy_1',energy_1)
+#
+#
+# energy_axial1.append(energy_1)
+#
+#
+# tmp = H.dot(a_axial2)
+#
+# print('H',H)
+# print('A',A)
+# print('b',b)
+# print('a_axial2',a_axial2)
+# print('tmp',tmp)
+#
+# tmp = (1/2)*a_axial2.dot(tmp)
+# print('tmp',tmp)
+#
+# tmp2 = A.dot(b)
+# print('tmp2',tmp2)
+# tmp2 = 2*a_axial2.dot(tmp2)
+#
+# print('tmp2',tmp2)
+# energy_2 = tmp - tmp2
+# print('energy_2',energy_2)
+#
+#
+# energy_axial2.append(energy_2)
+#
+#
+#
+#
+#
+# print('theta_values', theta_values)
+#
+#
+#
+
+
+#
+#
+#
+#
+# kappas = []
+# alphas = []
+# # G.append(float(s[0]))
+#
+#
+#
+#
+# for t in T :
+#
+# abar_current = sstar*abar+t*abarperp;
+# # print('abar_current', abar_current)
+# abar_current[abar_current < 1e-10] = 0
+# # print('abar_current', abar_current)
+#
+# # G = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+# G = [abar_current[0], abar_current[1] , (2*abar_current[0]*abar_current[1])**0.5 ]
+#
+# e = [(abar_current[0]/(abar_current[0]+abar_current[1]))**0.5, (abar_current[1]/(abar_current[0]+abar_current[1]))**0.5]
+# kappa = abar_current[0]+abar_current[1]
+# alpha = math.atan2(e[1], e[0])
+#
+# print('angle current:', alpha)
+#
+# kappas.append(kappa)
+# alphas.append(alpha)
+#
+#
+#
+# alphas = np.array(alphas)
+# kappas = np.array(kappas)
+#
+#
+# print('kappas:',kappas)
+# print('alphas:',alphas)
+# print('min alpha:', min(alphas))
+# print('min kappa:', min(kappas))
+#
+# mpl.rcParams['text.usetex'] = True
+# mpl.rcParams["font.family"] = "serif"
+# mpl.rcParams["font.size"] = "9"
+# width = 6.28 *0.5
+# height = width / 1.618
+# fig = plt.figure()
+# # ax = plt.axes((0.15,0.21 ,0.75,0.75))
+# ax = plt.axes((0.15,0.21 ,0.8,0.75))
+# ax.tick_params(axis='x',which='major', direction='out',pad=5)
+# ax.tick_params(axis='y',which='major', length=3, width=1, direction='out',pad=3)
+# # ax.xaxis.set_major_locator(MultipleLocator(0.1))
+# # ax.xaxis.set_minor_locator(MultipleLocator(0.05))
+# # ax.xaxis.set_major_locator(plt.MultipleLocator(np.pi / 8))
+# # ax.xaxis.set_minor_locator(plt.MultipleLocator(np.pi / 16))
+# ax.xaxis.set_major_locator(plt.MultipleLocator(np.pi / 2))
+# ax.xaxis.set_minor_locator(plt.MultipleLocator(np.pi / 4))
+# ax.xaxis.set_major_formatter(plt.FuncFormatter(format_func))
+# ax.grid(True,which='major',axis='both',alpha=0.3)
+#
+#
+#
+#
+# ax.plot(alphas, kappas, 'royalblue', zorder=3, )
+# ax.plot(-1.0*alphas, kappas, 'red', zorder=3, )
diff --git a/src/Energy_ContourG+_v3_plotSurf.py b/src/Energy_ContourG+_v3_plotSurf.py
new file mode 100644
index 0000000000000000000000000000000000000000..be4135569c928840b549648e86585ab94d2d6fc7
--- /dev/null
+++ b/src/Energy_ContourG+_v3_plotSurf.py
@@ -0,0 +1,1309 @@
+import numpy as np
+import matplotlib.pyplot as plt
+import sympy as sym
+import math
+import os
+import subprocess
+import fileinput
+import re
+import matlab.engine
+import sys
+from ClassifyMin import *
+from HelperFunctions import *
+# from CellScript import *
+from mpl_toolkits.mplot3d import Axes3D
+import matplotlib.cm as cm
+from vtk.util import numpy_support
+from pyevtk.hl import gridToVTK
+import time
+import matplotlib.ticker as ticker
+
+import matplotlib as mpl
+from matplotlib.ticker import MultipleLocator,FormatStrFormatter,MaxNLocator
+import pandas as pd
+
+import seaborn as sns
+import matplotlib.colors as mcolors
+
+from chart_studio import plotly
+import plotly.graph_objs as go
+import plotly.express as px
+import plotly.colors
+# from matplotlib import rc
+# rc('text', usetex=True) # Use LaTeX font
+#
+# import seaborn as sns
+# sns.set(color_codes=True)
+
+
+def show(fig):
+ import io
+ import plotly.io as pio
+ from PIL import Image
+ buf = io.BytesIO()
+ pio.write_image(fig, buf)
+ img = Image.open(buf)
+ img.show()
+
+
+
+
+# set the colormap and centre the colorbar
+class MidpointNormalize(mcolors.Normalize):
+ """
+ Normalise the colorbar so that diverging bars work there way either side from a prescribed midpoint value)
+
+ e.g. im=ax1.imshow(array, norm=MidpointNormalize(midpoint=0.,vmin=-100, vmax=100))
+ """
+ def __init__(self, vmin=None, vmax=None, midpoint=None, clip=False):
+ self.midpoint = midpoint
+ mcolors.Normalize.__init__(self, vmin, vmax, clip)
+
+ def __call__(self, value, clip=None):
+ # I'm ignoring masked values and all kinds of edge cases to make a
+ # simple example...
+ x, y = [self.vmin, self.midpoint, self.vmax], [0, 0.5, 1]
+ return np.ma.masked_array(np.interp(value, x, y), np.isnan(value))
+
+
+
+def set_size(width, fraction=1):
+ """Set figure dimensions to avoid scaling in LaTeX.
+
+ Parameters
+ ----------
+ width: float
+ Document textwidth or columnwidth in pts
+ fraction: float, optional
+ Fraction of the width which you wish the figure to occupy
+
+ Returns
+ -------
+ fig_dim: tuple
+ Dimensions of figure in inches
+ """
+ # Width of figure (in pts)
+ fig_width_pt = width * fraction
+
+ # Convert from pt to inches
+ inches_per_pt = 1 / 72.27
+
+ # Golden ratio to set aesthetic figure height
+ # https://disq.us/p/2940ij3
+ golden_ratio = (5**.5 - 1) / 2
+
+ # Figure width in inches
+ fig_width_in = fig_width_pt * inches_per_pt
+ # Figure height in inches
+ fig_height_in = fig_width_in * golden_ratio
+
+ fig_dim = (fig_width_in, fig_height_in)
+
+ return fig_dim
+
+
+
+def format_func(value, tick_number):
+ # find number of multiples of pi/2
+ # N = int(np.round(2 * value / np.pi))
+ # if N == 0:
+ # return "0"
+ # elif N == 1:
+ # return r"$\pi/2$"
+ # elif N == -1:
+ # return r"$-\pi/2$"
+ # elif N == 2:
+ # return r"$\pi$"
+ # elif N % 2 > 0:
+ # return r"${0}\pi/2$".format(N)
+ # else:
+ # return r"${0}\pi$".format(N // 2)
+ ##find number of multiples of pi/2
+ N = int(np.round(4 * value / np.pi))
+ if N == 0:
+ return "0"
+ elif N == 1:
+ return r"$\pi/4$"
+ elif N == -1:
+ return r"$-\pi/4$"
+ elif N == 2:
+ return r"$\pi/2$"
+ elif N == -2:
+ return r"$-\pi/2$"
+ elif N % 2 > 0:
+ return r"${0}\pi/2$".format(N)
+ else:
+ return r"${0}\pi$".format(N // 2)
+
+
+
+def find_nearest(array, value):
+ array = np.asarray(array)
+ idx = (np.abs(array - value)).argmin()
+ return array[idx]
+
+
+def find_nearestIdx(array, value):
+ array = np.asarray(array)
+ idx = (np.abs(array - value)).argmin()
+ return idx
+
+
+
+
+def check_case(q1,q2,q12,q3,b1,b2):
+
+ # a = np.array([a1,a2])
+ b = np.array([b1,b2])
+ H = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+ A = np.array([[q1,1/2*q12], [1/2*q12,q2] ])
+
+
+ print('det(H)=', np.linalg.det(H))
+
+ # check if g* is in G^*_R^2
+ tmp = A.dot(b)
+
+ ## compute inverse of H :
+ inv_H = np.linalg.inv(H)
+
+ g_star = 2*inv_H.dot(tmp)
+
+ print('g_star=', g_star)
+
+
+ return g_star
+
+
+def determine_b(q1,q2,q12,q3,g_star):
+ ##
+ # Input: g_star
+ # Output : b such that g_star is minimizer, i.e A*b = (1/2)*H*g_star
+ # q1=1;
+ # q2=2;
+ # q12=1/2;
+ # q3=((4*q1*q2)**0.5-q12)/2;
+ # H=[2*q1,q12+2*q3;q12+2*q3,2*q2];
+
+
+
+ H = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+ A = np.array([[q1,1/2*q12], [1/2*q12,q2] ])
+ abar = np.array([q12+2*q3, 2*q2])
+ rhs = (1/2)*H.dot(g_star)
+ print('rhs:', rhs)
+ b = np.linalg.lstsq(A, rhs)[0]
+ print('b',b)
+ b1=b[0]
+ b2=b[1]
+
+ return b
+ ## ---------------
+
+
+def get_minimizer(q1,q2,q3,b1,b2):
+
+ # In the case if q12 == 0:
+ quotient = (q1*q2-q3**2)
+ g_star = np.array([(q1*q2*b1-q3*q2*b2)/quotient, (q1*q2*b2-q3*q1*b1)/quotient])
+ print('g_star=', g_star)
+ return g_star
+
+
+def energy(a1,a2,q1,q2,q12,q3,b1,b2):
+
+
+ a = np.array([a1,a2])
+ b = np.array([b1,b2])
+ H = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+ A = np.array([[q1,1/2*q12], [1/2*q12,q2] ])
+
+
+ tmp = H.dot(a)
+
+ # print('H',H)
+ # print('A',A)
+ # print('b',b)
+ # print('a',a)
+ # print('tmp',tmp)
+
+ tmp = (1/2)*a.dot(tmp)
+ # print('tmp',tmp)
+
+ tmp2 = A.dot(b)
+ # print('tmp2',tmp2)
+ tmp2 = 2*a.dot(tmp2)
+
+ # print('tmp2',tmp2)
+ energy = tmp - tmp2
+ # print('energy',energy)
+
+
+ # energy_axial1.append(energy_1)
+
+ return energy
+
+
+
+# def energy(a1,a2,q1,q2,q12,q3,b1,b2):
+#
+#
+# b = np.array([b1,b2])
+# H = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+# A = np.array([[q1,1/2*q12], [1/2*q12,q2] ])
+#
+#
+# tmp = H.dot(a)
+#
+# print('H',H)
+# print('A',A)
+# print('b',b)
+# print('a',a)
+# print('tmp',tmp)
+#
+# tmp = (1/2)*a.dot(tmp)
+# print('tmp',tmp)
+#
+# tmp2 = A.dot(b)
+# print('tmp2',tmp2)
+# tmp2 = 2*a.dot(tmp2)
+#
+# print('tmp2',tmp2)
+# energy = tmp - tmp2
+# print('energy',energy)
+#
+#
+# # energy_axial1.append(energy_1)
+#
+# return energy
+#
+
+
+def draw_1ParameterLine(q1,q2,q12,q3):
+
+ # q1=1;
+ # q2=2;
+ # q12=1/2;
+ # q3=((4*q1*q2)**0.5-q12)/2;
+ # H=[2*q1,q12+2*q3;q12+2*q3,2*q2];
+
+ H = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+ A = np.array([[q1,1/2*q12], [1/2*q12,q2] ])
+ abar = np.array([q12+2*q3, 2*q2])
+ abar = (1.0/math.sqrt((q12+2*q3)**2+(2*q2)**2))*abar
+
+ print('abar:',abar)
+
+ b = np.linalg.lstsq(A, abar)[0]
+ print('b',b)
+
+ b1=b[0]
+ b2=b[1]
+
+
+ # print('abar:',np.shape(abar))
+ # print('np.transpose(abar):',np.shape(np.transpose(abar)))
+ sstar = (1/(q1+q2))*abar.dot(A.dot(b))
+ # sstar = (1/(q1+q2))*abar.dot(tmp)
+ print('sstar', sstar)
+ abarperp= np.array([abar[1],-abar[0]])
+ print('abarperp:',abarperp)
+
+ N=500;
+ scale_domain = 5
+ translate_startpoint = -1.8
+ scale_domain = 4.65
+ translate_startpoint = -1.85
+
+ # T = np.linspace(-sstar*(q12+2*q3)/(2*q2), sstar*(2*q2)/(q12+2*q3), num=N)
+ T = np.linspace(-sstar*(q12+2*q3)/(2*q2)*scale_domain + translate_startpoint, sstar*(2*q2)/(q12+2*q3)*scale_domain , num=N)
+ # T = np.linspace(-2,2, num=N)
+ # print('T:', T)
+
+ print('T.min():', T.min())
+ print('T.max():', T.max())
+
+ kappas = []
+ alphas = []
+ # G.append(float(s[0]))
+
+ G_container = []
+ abar_container = []
+
+
+ abar_tmp = abar
+
+ for t in T :
+ abar_current = sstar*abar+t*abarperp;
+ # print('abar_current', abar_current)
+ abar_current[abar_current < 1e-10] = 0
+ # print('abar_current', abar_current)
+ # G = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+ G = [abar_current[0], abar_current[1] , (2*abar_current[0]*abar_current[1])**0.5 ]
+ # print('type of G', type(G))
+ # print('G', G)
+ G_container.append(G)
+ abar_container.append(abar_current)
+ e = [(abar_current[0]/(abar_current[0]+abar_current[1]))**0.5, (abar_current[1]/(abar_current[0]+abar_current[1]))**0.5]
+ kappa = abar_current[0]+abar_current[1]
+ alpha = math.atan2(e[1], e[0])
+ # print('angle current:', alpha)
+ kappas.append(kappa)
+ alphas.append(alpha)
+
+
+ alphas = np.array(alphas)
+ kappas = np.array(kappas)
+
+ # print('G_container', G_container)
+ G = np.array(G_container)
+ abar = np.array(abar_container)
+
+ # print('G', G)
+ # print('abar', abar)
+ # print('abar.shape',abar.shape)
+ line = ax.plot(abar[:,0],abar[:,1], linewidth=2, color='royalblue', linestyle='-', zorder=4)
+
+
+ return line
+
+
+
+
+################################################################################################################
+################################################################################################################
+################################################################################################################
+
+InputFile = "/inputs/computeMuGamma.parset"
+OutputFile = "/outputs/outputMuGamma.txt"
+# --------- Run from src folder:
+path_parent = os.path.dirname(os.getcwd())
+os.chdir(path_parent)
+path = os.getcwd()
+print(path)
+InputFilePath = os.getcwd()+InputFile
+OutputFilePath = os.getcwd()+OutputFile
+print("InputFilepath: ", InputFilePath)
+print("OutputFilepath: ", OutputFilePath)
+print("Path: ", path)
+
+print('---- Input parameters: -----')
+
+# q1=1;
+# q2=2;
+# q12=1/2;
+# q3=((4*q1*q2)**0.5-q12)/2;
+# # H=[2*q1,q12+2*q3;q12+2*q3,2*q2];
+#
+# H = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+# A = np.array([[q1,1/2*q12], [1/2*q12,q2] ])
+# abar = np.array([q12+2*q3, 2*q2])
+# abar = (1.0/math.sqrt((q12+2*q3)**2+(2*q2)**2))*abar
+#
+# print('abar:',abar)
+#
+# b = np.linalg.lstsq(A, abar)[0]
+# print('b',b)
+#
+#
+# # print('abar:',np.shape(abar))
+# # print('np.transpose(abar):',np.shape(np.transpose(abar)))
+# sstar = (1/(q1+q2))*abar.dot(A.dot(b))
+# # sstar = (1/(q1+q2))*abar.dot(tmp)
+# print('sstar', sstar)
+# abarperp= np.array([abar[1],-abar[0]])
+# print('abarperp:',abarperp)
+
+
+# -------------------------- Input Parameters --------------------
+#
+# mu1 = 1.0
+# rho1 = 1.0
+# alpha = 5.0
+# theta = 1.0/2
+# # theta= 0.1
+# beta = 5.0
+#
+
+
+
+# mu1 = 1.0
+# rho1 = 1.0
+# alpha = -0.75
+# theta = 1.0/2
+# # theta= 0.1
+# beta = 5.0
+
+
+# mu1 = 1.0
+# rho1 = 1.0
+# alpha = 2.0
+# theta = 1.0/2
+# # theta= 0.1
+# beta = 5.0
+
+
+#Figure3:
+# mu1 = 1.0
+# rho1 = 1.0
+# alpha = 2.0
+# theta = 1.0/8
+# # theta= 0.1
+# beta = 2.0
+
+
+# alpha= -5
+
+
+#set gamma either to 1. '0' 2. 'infinity' or 3. a numerical positive value
+# gamma = '0'
+# # gamma = 'infinity'
+#
+#
+# lambda1 = 0.0
+
+
+print('---- Input parameters: -----')
+# print('mu1: ', mu1)
+# print('rho1: ', rho1)
+# # print('alpha: ', alpha)
+# print('beta: ', beta)
+# # print('theta: ', theta)
+# print('gamma:', gamma)
+#
+# print('lambda1: ', lambda1)
+print('----------------------------')
+# ----------------------------------------------------------------
+print('----------------------------')
+
+# ----------------------------------------------------------------
+
+
+
+
+
+
+# q1 = (1.0/6.0)*harmonicMean(mu1, beta, theta)
+# q2 = (1.0/6.0)*arithmeticMean(mu1, beta, theta)
+# q12 = 0.0
+# q3 = GetMuGamma(beta, theta,gamma,mu1,rho1,InputFilePath ,OutputFilePath )
+# b1 = prestrain_b1(rho1,beta, alpha, theta )
+# b2 = prestrain_b2(rho1,beta, alpha, theta )
+#
+
+
+case = 'a'
+# case = 'b'
+case = 'c'
+
+
+
+if case == 'a':
+ print('---- CASE (a) ----')
+ q1 = 1
+ q2 = 2
+ q12 = 0
+ q3 = 1
+ g_star = np.array([0,1])
+ g_star = np.array([-1,1])
+ # ToDO
+ b = determine_b(q1,q2,q12,q3, g_star)
+ b1 = b[0]
+ b2 = b[1]
+
+
+if case == 'b':
+ print('---- CASE (b) ----')
+ q1 = 1
+ q2 = 2
+ q12 = 0
+ q3 = 1
+ g_star = np.array([1,1])
+ # ToDO
+ b = determine_b(q1,q2,q12,q3, g_star)
+ b1 = b[0]
+ b2 = b[1]
+
+
+if case == 'c':
+ print('---- CASE (c) ----')
+ ## ---- 1-ParameterFamilyCase:
+ q1=1;
+ q2=2;
+ q12=1/2;
+ q3=((4*q1*q2)**0.5-q12)/2;
+ # H=[2*q1,q12+2*q3;q12+2*q3,2*q2];
+ H = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+ A = np.array([[q1,1/2*q12], [1/2*q12,q2] ])
+ abar = np.array([q12+2*q3, 2*q2])
+ abar = (1.0/math.sqrt((q12+2*q3)**2+(2*q2)**2))*abar
+ print('abar:',abar)
+ b = np.linalg.lstsq(A, abar)[0]
+ print('b',b)
+ b1=b[0]
+ b2=b[1]
+ ## ---------------
+
+
+
+
+print('q1 = ', q1)
+print('q2 = ', q2)
+print('q3 = ', q3)
+print('q12 = ', q12)
+print('b1 = ', b1)
+print('b2 = ', b2)
+
+## --- CHECK CASE ---
+
+
+
+
+
+g_star = check_case(q1,q2,q12,q3,b1,b2)
+print('g_star:',g_star)
+
+# TEST
+print('special case g_star:')
+get_minimizer(q1,q2,q3,b1,b2)
+
+
+
+
+## -------------------------------------
+
+num_Points = 400
+num_Points = 600
+num_Points = 200
+# num_Points = 100
+# num_Points = 20
+
+
+# Creating dataset
+x = np.linspace(-5,5,num_Points)
+y = np.linspace(-5,5,num_Points)
+
+x = np.linspace(-20,20,num_Points)
+y = np.linspace(-20,20,num_Points)
+
+
+x = np.linspace(-2,2,num_Points)
+y = np.linspace(-2,2,num_Points)
+# x = np.linspace(-10,10,num_Points)
+# y = np.linspace(-10,10,num_Points)
+
+# x = np.linspace(-60,60,num_Points)
+# y = np.linspace(-60,60,num_Points)
+#
+#
+# x = np.linspace(-40,40,num_Points)
+# y = np.linspace(-40,40,num_Points)
+
+
+a1, a2 = np.meshgrid(x,y)
+
+# geyser = sns.load_dataset("geyser")
+# print('type of geyser:', type(geyser))
+# print('geyser:',geyser)
+
+# ContourRange=20
+ContourRange=2
+
+# x_in = np.linspace(-ContourRange,ContourRange,num_Points)
+# y_in = np.linspace(-ContourRange,ContourRange,num_Points)
+# a1_in, a2_in = np.meshgrid(x_in,y_in)
+
+print('a1:', a1)
+print('a2:',a2 )
+print('a1.shape', a1.shape)
+
+#-- FILTER OUT VALUES for G+ :
+
+# tmp1 = a1[np.where(a1*a2 >= 0)]
+# tmp2 = a2[np.where(a1*a2 >= 0)]
+#
+# np.take(a, np.where(a>100)[0], axis=0)
+# tmp1 = np.take(a1, np.where(a1*a2 >= 0)[0], axis=0)
+# tmp2 = np.take(a1, np.where(a1*a2 >= 0)[0], axis=0)
+# tmp2 = a2[np.where(a1*a2 >= 0)]
+
+tmp1 = a1[a1*a2 >= 0]
+tmp2 = a2[a1*a2 >= 0]
+tmp1 = tmp1.reshape(-1,5)
+tmp2 = tmp2.reshape(-1,5)
+
+
+# tmp1_pos = a1[np.where(a1*a2 >= 0) ]
+# tmp2_pos = a2[np.where(a1*a2 >= 0) ]
+# tmp1_pos = tmp1_pos[np.where(tmp1_pos >= 0)]
+# tmp2_pos = tmp2_pos[np.where(tmp2_pos >= 0)]
+#
+# tmp1_neg = a1[a1*a2 >= 0 ]
+# tmp2_neg = a2[a1*a2 >= 0 ]
+# tmp1_neg = tmp1_neg[tmp1_neg < 0]
+# tmp2_neg = tmp2_neg[tmp2_neg < 0]
+# a1 = tmp1
+# a2 = tmp2
+#
+# a1 = a1.reshape(-1,5)
+# a2 = a2.reshape(-1,5)
+#
+# tmp1_pos = tmp1_pos.reshape(-1,5)
+# tmp2_pos = tmp2_pos.reshape(-1,5)
+# tmp1_neg = tmp1_neg.reshape(-1,5)
+# tmp2_neg = tmp2_neg.reshape(-1,5)
+
+
+# print('a1:', a1)
+# print('a2:',a2 )
+# print('a1.shape', a1.shape)
+
+
+
+
+
+energyVec = np.vectorize(energy)
+
+# Z = energyVec(np.array([a1,a2]),q1,q2,q12,q3,b1,b2)
+Z = energyVec(a1,a2,q1,q2,q12,q3,b1,b2)
+
+# Z_in = energyVec(a1_in,a2_in,q1,q2,q12,q3,b1,b2)
+
+
+
+
+print('Z:', Z)
+print('any', np.any(Z<0))
+
+
+
+
+
+
+
+# negZ_a1 = a1[np.where(Z<0)]
+# negZ_a2 = a2[np.where(Z<0)]
+# negativeValues = Z[np.where(Z<0)]
+# print('negativeValues:',negativeValues)
+#
+# print('negZ_a1',negZ_a1)
+# print('negZ_a2',negZ_a2)
+#
+#
+# negZ_a1 = negZ_a1.reshape(-1,5)
+# negZ_a2 = negZ_a2.reshape(-1,5)
+# negativeValues = negativeValues.reshape(-1,5)
+#
+# Z_pos = energyVec(tmp1_pos,tmp2_pos,q1,q2,q12,q3,b1,b2)
+# Z_neg = energyVec(tmp1_neg,tmp2_neg,q1,q2,q12,q3,b1,b2)
+
+
+
+
+
+# print('Test energy:' , energy(np.array([1,1]),q1,q2,q12,q3,b1,b2))
+
+
+
+
+# print('Z_pos.shape', Z_pos.shape)
+
+
+
+
+
+
+
+## -- PLOT :
+mpl.rcParams['text.usetex'] = True
+mpl.rcParams["font.family"] = "serif"
+mpl.rcParams["font.size"] = "9"
+
+label_size = 8
+mpl.rcParams['xtick.labelsize'] = label_size
+mpl.rcParams['ytick.labelsize'] = label_size
+
+# plt.style.use('seaborn')
+# plt.style.use('seaborn-whitegrid')
+# sns.set()
+# plt.style.use('seaborn-whitegrid')
+
+label_size = 9
+mpl.rcParams['xtick.labelsize'] = label_size
+mpl.rcParams['ytick.labelsize'] = label_size
+
+width = 6.28 *0.5
+# width = 6.28 *0.33
+# width = 6.28
+height = width #/ 1.618
+
+# width = 452.9579/2
+# size= set_size(width, fraction=0.5)
+# print('set_size(width, fraction=0.5)', set_size(width, fraction=1))
+# print('size[0]',size[0])
+
+f_size = 10
+# fig= plt.figure()
+# fig, ax = plt.subplots()
+# fig.set_size_inches(width, height)
+# fig.set_size_inches(set_size(width, fraction=0.5))
+ax = plt.axes(projection ='3d', adjustable='box')
+# ax = plt.axes((0.17,0.21 ,0.75,0.75))
+
+# ax = plt.axes((0.17,0.23 ,0.7,0.7))
+# ax = plt.axes((0.17,0.23 ,1.0,1.0))
+# ax=plt.axes()
+# ax = plt.axes((0.15,0.18,0.8,0.8))
+# ax.tick_params(axis='x',which='major', direction='out',pad=5)
+# ax.tick_params(axis='y',which='major', length=3, width=1, direction='out',pad=3)
+# ax.xaxis.set_major_locator(MultipleLocator(0.1))
+# ax.xaxis.set_minor_locator(MultipleLocator(0.05))
+# ax.xaxis.set_major_locator(plt.MultipleLocator(np.pi / 8))
+# ax.xaxis.set_minor_locator(plt.MultipleLocator(np.pi / 16))
+# ax.xaxis.set_major_locator(plt.MultipleLocator(np.pi / 2))
+# ax.xaxis.set_minor_locator(plt.MultipleLocator(np.pi / 4))
+# ax.xaxis.set_major_formatter(plt.FuncFormatter(format_func))
+# ax.grid(True,which='major',axis='both',alpha=0.3)
+
+# colorfunction=(B*kappa)
+# print('colofunction',colorfunction)
+
+#translate Data
+# Z = Z - (Z.max()-Z.min())/2
+# Z = Z - 50
+# Z = Z - 500
+#
+# Z = Z.T
+
+
+# Substract constant:
+# c = (b1**2)*q1+b1*b2*q12+(b2**2)*q2
+# Z = Z-c
+#
+# print('Value of c:', c)
+
+
+
+print('Z.min()', Z.min())
+print('Z.max()', Z.max())
+norm=mcolors.Normalize(Z.min(),Z.max())
+# facecolors=cm.brg(norm)
+
+
+
+print('norm:', norm)
+print('type of norm', type(norm))
+print('norm(0):', norm(0))
+print('norm(Z):', norm(Z))
+
+# ax.plot(theta_rho, theta_values, 'royalblue', zorder=3, )
+
+# ax.scatter(a1,a2, s=0.5)
+
+# ax.scatter(tmp1_pos,tmp2_pos, s=0.5)
+# ax.scatter(tmp1_neg,tmp2_neg, s=0.5)
+
+# CS = ax.contour(a1, a2, Z,10, cmap=plt.cm.gnuplot, levels=100 )
+# CS = ax.contour(a1, a2, Z,10, cmap=plt.cm.gnuplot, levels=20 )
+
+
+# sns.kdeplot(np.array([a1, a2, Z]))
+# sns.kdeplot(tmp1_pos,tmp2_pos,Z_pos)
+
+# levels = [-5.0, -4, -3, 0.0, 1.5, 2.5, 3.5]
+# CS = ax.contour(a1, a2, Z,10, cmap=plt.cm.gnuplot, corner_mask=True,levels=levels)
+# CS = ax.contour(a1, a2, Z, cmap=plt.cm.gnuplot(norm(Z)), corner_mask=True)
+# CS = ax.contour(a1, a2, Z, cm.brg(norm(Z)), levels=20)
+# CS = ax.contour(a1, a2, Z, cmap=plt.cm.gnuplot, levels=20)
+# CS = ax.contour(a1, a2, Z, colors='k', levels=14, linewidths=(0.5,))
+# CS = ax.contour(a1, a2, Z, colors='k', levels=18, linewidths=(0.5,))
+
+# ax.contour(negZ_a1, negZ_a2, negativeValues, colors='k', linewidths=(0.5,))
+# CS = ax.contour(a1_in, a2_in, Z_in, colors='k', linewidths=(0.75) ,zorder=5)
+
+
+step = (-1)*Z.min()
+# step = 3.0
+
+levels = np.arange(Z.min(),Z.max()/2,step)
+# evels = np.arange(-4, 25, 4)
+# levels = np.arange(-3, 23, 4)
+
+# levels = np.arange(Z.min(),Z.max()/12,step)
+# levels = np.arange(Z.min(),Z.max(),step)
+# levels = np.arange(0,Z.max()/2,200)
+# CS = ax.contour(a1_in, a2_in, Z_in, colors='k', linewidths=(0.75), levels=levels ,zorder=5)
+
+# CS = ax.contour(a1, a2, Z, colors='k', linewidths=(0.75), levels=levels ,zorder=5)
+# CS = ax.contour(a1, a2, Z,5, colors='k', linewidths=(0.75) ,zorder=5, vmin=Z.min(), vmax=1)
+
+# CS = ax.contour(a1, a2, Z,5, colors='k', linewidths=(0.75) ,zorder=5, vmin=Z.min(), vmax=1)
+
+if case == 'b':
+ levels = np.arange(-4, 25, 4)
+
+
+if case == 'a':
+ levels = np.arange(-1, 25, 5) # if g_star = [0 1]
+ levels = np.arange(0, 24, 4) # if g_star = [-1 1]
+if case == 'c':
+ levels = np.arange(0, 25, 4)
+
+# CS = ax.contour(a1, a2, Z,levels, colors='k',linewidths=(0.75), extent=(-2, 2, -2, 2), zorder=5)
+
+
+# CS = ax.contour(a1 , a2 , Z, colors='k', linewidths=(0.75), zorder=5)
+# CS = ax.contour(a1_in, a2_in, Z_in, colors='k', linewidths=(1) , vmin= Z.min()+0.04, zorder=5)
+# CS = ax.contour(a1, a2, Z, colors='k', linewidths=(1) , vmin= Z.min()+0.04, zorder=5)
+
+
+
+# df = pd.DataFrame(data=Z_in, columns=a1_in, index=a2_in)
+# df2 = pd.DataFrame(np.array([[1, 2, 3], [4, 5, 6], [7, 8, 9]]),
+# columns=['a', 'b', 'c'])
+
+# sns.kdeplot(data=df2, x="waiting", y="duration")
+# sns.kdeplot(data=df2)
+
+# CS = ax.contour(a1, a2, Z, colors='k', linewidths=(0.5,))
+
+# CS = ax.contour(a1, a2, Z,10, cmap=plt.cm.gnuplot, extend='both', levels=50)
+# CS = ax.contourf(a1, a2, Z,10, colors='k', extend='both', levels=50)
+# CS = ax.contourf(a1, a2, Z,10, colors='k')
+#
+# # CS = ax.contour(tmp1_pos,tmp2_pos, Z_pos,10, cmap=plt.cm.gnuplot, levels=10 )
+# # CS = ax.contour(tmp1_pos,tmp2_pos, Z_pos,10, cmap=plt.cm.gnuplot, corner_mask=True)
+#
+# CS = ax.contour(a1, a2, Z,10, colors = 'k')
+# ax.clabel(CS, inline=True, fontsize=4)
+
+# ax.clabel(CS, inline=True, fontsize=4)
+
+
+# 1- ParameterFAMILY CASE :
+# manual_locations = [
+# (1, 1), (-5, -5), (-10, -10 ),(-12.5,-12.5),(-14,-14), (-15,-15),
+# (5, 5), (10, 10 ),(12.5,12.5), (15,15), (17,17)]
+
+
+if case == 'c':
+ manual_locations = [
+ (1, 1), (0.5, 0.5),(1.5,1.5),(1.75,1.75),(-0.2,0.2), (-0.5,-0.5),
+ (-1,-1),(-1.25,-1.25), (-1.5,-1.5)]
+ # ax.clabel(CS, inline=True, fontsize=9, colors='black', manual=manual_locations)
+else :
+ ax.clabel(CS, inline=True, fontsize=9, colors='black', zorder=5)
+
+# GAMMA = inf
+# manual_locations = [
+# (1, 1), (-5, -5), (-10, -10 ), (-15,-15),
+# (5, 5), (10, 10 ),(12.5,12.5), (15,15), (17,17)]
+
+#
+#
+# # GAMMA = 0
+# manual_locations = [
+# (1, 1), (-5, -5), (-10, -10 ), (-15,-15), (-15,7),
+# (5, 5), (10, 10 ), (15,15), (17,17)]
+
+
+# ax.clabel(CS, inline=True, fontsize=f_size, colors='black')
+# ax.clabel(CS, inline=True, fontsize=9, colors='black', zorder=5)
+
+# cmap = cm.brg(norm(Z))
+#
+# C_map = cm.inferno(norm(Z))
+
+# ax.imshow(Z, cmap=C_map, extent=[-20, 20, -20, 20], origin='lower', alpha=0.5)
+
+# ax.imshow(norm(Z), extent=[-20, 20, -20, 20], origin='lower',
+# cmap='bwr', alpha=0.8)
+
+# ax.imshow(norm(Z), extent=[-20, 20, -20, 20],origin='lower', vmin=Z.min(), vmax=Z.max(),
+# cmap='bwr', alpha=0.6)
+
+# ax.imshow(norm(Z), extent=[-20, 20, -20, 20],origin='lower', norm = norm,
+# cmap='coolwarm', alpha=0.6)
+
+
+cmap=mpl.cm.RdBu_r
+cmap=mpl.cm.viridis_r
+# cmap=mpl.cm.bwr
+cmap=mpl.cm.coolwarm
+# cmap=mpl.cm.gnuplot
+cmap=mpl.cm.magma_r
+# cmap=mpl.cm.inferno_r
+# cmap=mpl.cm.plasma
+# cmap=mpl.cm.plasma_r
+# cmap=mpl.cm.cividis_r
+# cmap = mpl.colors.LinearSegmentedColormap.from_list("", ["blue","violet","red"])
+# cmap = mpl.colors.LinearSegmentedColormap.from_list("", ["blue","orange"])
+
+# cmap = mpl.colors.LinearSegmentedColormap.from_list("", [(0,"red"), (.1,"violet"), (.5, "blue"), (1.0, "green")])
+# make a colormap that has land and ocean clearly delineated and of the
+# same length (256 + 256)
+#
+# colors_undersea = plt.cm.terrain(np.linspace(0, 0.17, 256))
+# colors_land = plt.cm.terrain(np.linspace(0.25, 1, 256))
+# all_colors = np.vstack((colors_undersea, colors_land))
+# # cmap = mcolors.LinearSegmentedColormap.from_list(
+# # 'terrain_map', all_colors)
+
+
+# cmap = px.colors.sequential.agsunset
+# cmap = plotly.colors.PLOTLY_SCALES["Viridis"]
+
+
+
+
+
+# cmap = cm.brg(Z)
+divnorm=mcolors.TwoSlopeNorm(vmin=Z.min(), vcenter=0., vmax=Z.max())
+divnorm=mcolors.TwoSlopeNorm(vmin=Z.min(), vcenter=(Z.max()+Z.min())/2, vmax=Z.max())
+# divnorm=mcolors.TwoSlopeNorm(vmin=-500, vcenter=0, vmax=Z.max())
+
+# divnorm=mcolors.TwoSlopeNorm(vmin=-10, vcenter=0. ,vmax=10)
+# divnorm=mcolors.TwoSlopeNorm(vmin=-10, vcenter=0., vmax=Z.max())
+
+# divnorm=mcolors.LogNorm(vmin=Z.min(), vmax=Z.max()) #Test LogNorm
+
+# cmap = cm.brg(divnorm(Z))
+
+# ax.imshow(Z, extent=[-20, 20, -20, 20],origin='lower', norm = norm,
+# cmap='coolwarm', alpha=0.6)
+
+# ax.imshow(Z, extent=[-20, 20, -20, 20],origin='lower',
+# cmap='coolwarm', alpha=0.6)
+# ax.imshow(Z, extent=[-20, 20, -20, 20],origin='lower',
+# cmap=cmap, alpha=0.6)
+
+# divnorm=mcolors.TwoSlopeNorm(vmin=Z.min(), vcenter=0., vmax=Z.max())
+# plt.imshow(Z, extent=[x.min(), x.max(), y.min(), y.max()],origin='lower',
+# cmap=cmap, alpha=0.6)
+
+# I = plt.imshow(Z, extent=[x.min(), x.max(), y.min(), y.max()],origin='lower', norm = divnorm,
+# cmap=cmap, alpha=0.6)
+
+# plt.imshow(Z, extent=[x.min(), x.max(), y.min(), y.max()],origin='lower', norm = divnorm,
+# cmap=cmap, alpha=0.9)
+
+
+
+
+# plt.imshow(Z, extent=[x.min(), x.max(), y.min(), y.max()],origin='lower', norm = divnorm,
+# cmap=cmap, alpha=0.6)
+
+
+# I = plt.imshow(Z, extent=[x.min(), x.max(), y.min(), y.max()],origin='lower',
+ # cmap=cmap, alpha=0.6)
+
+
+# I = plt.imshow(Z, extent=[x.min(), x.max(), y.min(), y.max()],origin='lower', norm = mcolors.CenteredNorm(),
+# cmap=cmap, alpha=0.6)
+
+
+
+# COLORBAR :
+# cbar = plt.colorbar()
+# cbar.ax.tick_params(labelsize=f_size)
+# fig.colorbar(I)
+
+
+
+##----- ADD RECTANGLE TO COVER QUADRANT :
+epsilon = 0.4
+epsilon = 0.2
+epsilon = 0.005
+epsilon = 0.01
+# ax.axvspan(0, x.max(), y.min(), 0, alpha=1, color='yellow', zorder=5)#yellow
+# ax.fill_between([0, x.max()], y.min(), 0, alpha=0.3, color='yellow', zorder=5)#yellow
+# ax.fill_between([x.min(), 0], 0, y.max(), alpha=0.3, color='yellow', zorder=5)#yellow
+
+fillcolor = 'white'
+# ax.fill_between([0+epsilon, x.max()], y.min(), 0-epsilon, alpha=0.7, color=fillcolor, zorder=4)#yellow
+# ax.fill_between([x.min(), 0-epsilon], 0+epsilon, y.max(), alpha=0.7, color=fillcolor, zorder=4)#yellow
+# ax.fill_between([0+epsilon, x.max()-epsilon], y.min()+epsilon, 0-epsilon, alpha=1.0, color=fillcolor, zorder=4)#yellow
+# ax.fill_between([x.min()+epsilon, 0-epsilon], 0+epsilon, y.max()-epsilon, alpha=1.0, color=fillcolor, zorder=4)#yellow
+
+ax.plot_surface(a1,a2, Z, cmap=cm.coolwarm,
+ linewidth=0, antialiased=False)
+
+
+
+# ax.plot(theta_rho, energy_axial1, 'royalblue', zorder=3, label=r"axialMin1")
+# ax.plot(theta_rho, energy_axial2, 'forestgreen', zorder=3, label=r"axialMin2")
+# ax.plot(-1.0*alphas, kappas, 'red', zorder=3, )
+
+
+
+if case == 'c':
+ print('draw Line')
+ # line = draw_1ParameterLine(q1,q2,q12,q3)
+else:
+ # PLOT MINIMIZER g*:
+ ax.scatter(g_star[0],g_star[1], s=20, zorder=5)
+ ax.text(g_star[0]+0.1,g_star[1]-0.1, r"$g_*$", color='royalblue', size=15, zorder = 5)
+
+# lg = ax.legend(bbox_to_anchor=(0.0, 0.75), loc='upper left')
+
+if case == 'c':
+ # draw minimizers
+ print('np.where(Z == Z.min())',np.where(np.round(Z,3) == np.round(Z.min(),3)))
+ # tmp_x = a1[np.where(np.round(Z,6) == np.round(Z.min(),6))]
+ # tmp_y = a2[np.where(np.round(Z,6) == np.round(Z.min(),6))]
+ # # ax.scatter(tmp_x,tmp_y,color='red', zorder=5, s=1)
+ # # ax.plot(tmp_x,tmp_y,color='red', zorder=5)
+ # ax.plot(tmp_x,tmp_y,color='royalblue', zorder=5)
+
+
+### PLot x and y- Axes
+ax.plot(ax.get_xlim(),[0,0],'k--', linewidth=0.5, zorder=4)
+ax.plot([0,0],ax.get_ylim(), 'k--', linewidth=0.5, zorder=4)
+
+
+
+
+
+
+ax.set_xlabel(r"$a_1$", fontsize=f_size ,labelpad=0)
+ax.set_ylabel(r"$a_2$", fontsize=f_size ,labelpad=0)
+# ax.set_ylabel(r"energy")
+ax.tick_params(axis='both', which='major', labelsize=f_size)
+ax.tick_params(axis='both', which='minor', labelsize=f_size)
+
+
+
+# ax.set_xticks([-np.pi/2, -np.pi/4 ,0, np.pi/4, np.pi/2 ])
+# labels = ['$0$',r'$\pi/8$', r'$\pi/4$' ,r'$3\pi/8$' , r'$\pi/2$']
+# ax.set_yticklabels(labels)
+
+
+# plt.subplots_adjust(left = 0.25 )
+
+
+# ax.legend(loc='upper right')
+
+# fig.subplots_adjust(left=.18, bottom=.12, right=.90, top=.97)
+
+# fig.set_size_inches(width, height)
+# fig.set_size_inches(set_size(width, fraction=0.33))
+Outputname = 'Energy_ContourG+_case'+ str(case) + '.pdf'
+# fig.savefig(Outputname)
+
+plt.show()
+
+
+#
+#
+#
+# # Curve parametrised by \theta_rho = alpha in parameter space
+# N=100;
+# theta_rho = np.linspace(1, 3, num=N)
+# print('theta_rho:', theta_rho)
+#
+#
+# theta_values = []
+#
+#
+# for t in theta_rho:
+#
+# s = (1.0/10.0)*t+0.1
+# theta_values.append(s)
+#
+#
+#
+#
+#
+# theta_rho = np.array(theta_rho)
+# theta_values = np.array(theta_values)
+#
+# betas_ = 2.0
+#
+
+# alphas, betas, thetas = np.meshgrid(theta_rho, betas_, theta_values, indexing='ij')
+#
+#
+# harmonicMeanVec = np.vectorize(harmonicMean)
+# arithmeticMeanVec = np.vectorize(arithmeticMean)
+# prestrain_b1Vec = np.vectorize(prestrain_b1)
+# prestrain_b2Vec = np.vectorize(prestrain_b2)
+#
+# GetMuGammaVec = np.vectorize(GetMuGamma)
+# muGammas = GetMuGammaVec(betas,thetas,gamma,mu1,rho1,InputFilePath ,OutputFilePath )
+#
+# q1_vec = harmonicMeanVec(mu1, betas, thetas)
+# q2_vec = arithmeticMeanVec(mu1, betas, thetas)
+#
+# b1_vec = prestrain_b1Vec(rho1, betas, alphas, thetas)
+# b2_vec = prestrain_b2Vec(rho1, betas, alphas, thetas)
+
+# special case: q12 == 0!! .. braucht eigentlich nur b1 & b2 ...
+
+# print('type b1_values:', type(b1_values))
+
+
+
+# print('size(q1)',q1.shape)
+#
+#
+# energy_axial1 = []
+# energy_axial2 = []
+#
+# # for b1 in b1_values:
+# for i in range(len(theta_rho)):
+# print('index i:', i)
+#
+# print('theta_rho[i]',theta_rho[i])
+# print('theta_values[i]',theta_values[i])
+#
+# q1 = (1.0/6.0)*harmonicMean(mu1, beta, theta_values[i])
+# q2 = (1.0/6.0)*arithmeticMean(mu1, beta, theta_values[i])
+# q12 = 0.0
+# q3 = GetMuGamma(beta, theta_values[i],gamma,mu1,rho1,InputFilePath ,OutputFilePath )
+# b1 = prestrain_b1(rho1,beta, theta_rho[i],theta_values[i] )
+# b2 = prestrain_b2(rho1,beta, theta_rho[i],theta_values[i] )
+#
+#
+# # q2_vec = arithmeticMean(mu1, betas, thetas)
+# #
+# # b1_vec = prestrain_b1Vec(rho1, betas, alphas, thetas)
+# # b2_vec = prestrain_b2Vec(rho1, betas, alphas, thetas)
+# print('q1[i]',q1)
+# print('q2[i]',q2)
+# print('q3[i]',q3)
+# print('b1[i]',b1)
+# print('b2[i]',b2)
+# # print('q1[i]',q1[0][i])
+# # print('q2[i]',q2[i])
+# # print('b1[i]',b1[i])
+# # print('b2[i]',b2[i])
+# #compute axial energy #1 ...
+#
+# a_axial1 = np.array([b1,0])
+# a_axial2 = np.array([0,b2])
+# b = np.array([b1,b2])
+#
+# H = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+# A = np.array([[q1,1/2*q12], [1/2*q12,q2] ])
+#
+#
+# tmp = H.dot(a_axial1)
+#
+# print('H',H)
+# print('A',A)
+# print('b',b)
+# print('a_axial1',a_axial1)
+# print('tmp',tmp)
+#
+# tmp = (1/2)*a_axial1.dot(tmp)
+# print('tmp',tmp)
+#
+# tmp2 = A.dot(b)
+# print('tmp2',tmp2)
+# tmp2 = 2*a_axial1.dot(tmp2)
+#
+# print('tmp2',tmp2)
+# energy_1 = tmp - tmp2
+# print('energy_1',energy_1)
+#
+#
+# energy_axial1.append(energy_1)
+#
+#
+# tmp = H.dot(a_axial2)
+#
+# print('H',H)
+# print('A',A)
+# print('b',b)
+# print('a_axial2',a_axial2)
+# print('tmp',tmp)
+#
+# tmp = (1/2)*a_axial2.dot(tmp)
+# print('tmp',tmp)
+#
+# tmp2 = A.dot(b)
+# print('tmp2',tmp2)
+# tmp2 = 2*a_axial2.dot(tmp2)
+#
+# print('tmp2',tmp2)
+# energy_2 = tmp - tmp2
+# print('energy_2',energy_2)
+#
+#
+# energy_axial2.append(energy_2)
+#
+#
+#
+#
+#
+# print('theta_values', theta_values)
+#
+#
+#
+
+
+#
+#
+#
+#
+# kappas = []
+# alphas = []
+# # G.append(float(s[0]))
+#
+#
+#
+#
+# for t in T :
+#
+# abar_current = sstar*abar+t*abarperp;
+# # print('abar_current', abar_current)
+# abar_current[abar_current < 1e-10] = 0
+# # print('abar_current', abar_current)
+#
+# # G = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
+# G = [abar_current[0], abar_current[1] , (2*abar_current[0]*abar_current[1])**0.5 ]
+#
+# e = [(abar_current[0]/(abar_current[0]+abar_current[1]))**0.5, (abar_current[1]/(abar_current[0]+abar_current[1]))**0.5]
+# kappa = abar_current[0]+abar_current[1]
+# alpha = math.atan2(e[1], e[0])
+#
+# print('angle current:', alpha)
+#
+# kappas.append(kappa)
+# alphas.append(alpha)
+#
+#
+#
+# alphas = np.array(alphas)
+# kappas = np.array(kappas)
+#
+#
+# print('kappas:',kappas)
+# print('alphas:',alphas)
+# print('min alpha:', min(alphas))
+# print('min kappa:', min(kappas))
+#
+# mpl.rcParams['text.usetex'] = True
+# mpl.rcParams["font.family"] = "serif"
+# mpl.rcParams["font.size"] = "9"
+# width = 6.28 *0.5
+# height = width / 1.618
+# fig = plt.figure()
+# # ax = plt.axes((0.15,0.21 ,0.75,0.75))
+# ax = plt.axes((0.15,0.21 ,0.8,0.75))
+# ax.tick_params(axis='x',which='major', direction='out',pad=5)
+# ax.tick_params(axis='y',which='major', length=3, width=1, direction='out',pad=3)
+# # ax.xaxis.set_major_locator(MultipleLocator(0.1))
+# # ax.xaxis.set_minor_locator(MultipleLocator(0.05))
+# # ax.xaxis.set_major_locator(plt.MultipleLocator(np.pi / 8))
+# # ax.xaxis.set_minor_locator(plt.MultipleLocator(np.pi / 16))
+# ax.xaxis.set_major_locator(plt.MultipleLocator(np.pi / 2))
+# ax.xaxis.set_minor_locator(plt.MultipleLocator(np.pi / 4))
+# ax.xaxis.set_major_formatter(plt.FuncFormatter(format_func))
+# ax.grid(True,which='major',axis='both',alpha=0.3)
+#
+#
+#
+#
+# ax.plot(alphas, kappas, 'royalblue', zorder=3, )
+# ax.plot(-1.0*alphas, kappas, 'red', zorder=3, )
diff --git a/src/PhaseDiagram (copy).py b/src/PhaseDiagram (copy).py
deleted file mode 100644
index 3991bdb639c3cf93dd71334a0000175b0a621c67..0000000000000000000000000000000000000000
--- a/src/PhaseDiagram (copy).py
+++ /dev/null
@@ -1,346 +0,0 @@
-import numpy as np
-import matplotlib.pyplot as plt
-import sympy as sym
-import math
-import os
-import subprocess
-import fileinput
-import re
-import matlab.engine
-import sys
-from ClassifyMin import *
-from HelperFunctions import *
-# from CellScript import *
-from mpl_toolkits.mplot3d import Axes3D
-import matplotlib.cm as cm
-from vtk.util import numpy_support
-from pyevtk.hl import gridToVTK
-
-import time
-# print(sys.executable)
-
-# --------------------------------------------------------------------
-# START :
-# INPUT (Parameters): alpha, beta, theta, gamma, mu1, rho1
-#
-# -Option 1 : (Case lambda = 0 => q12 = 0)
-# compute q1,q2,b1,b2 from Formula
-# Option 1.1 :
-# set mu_gamma = 'q1' or 'q2' (extreme regimes: gamma \in {0,\infty})
-# Option 1.2 :
-# compute mu_gamma with 'Compute_MuGamma' (2D problem much faster then Cell-Problem)
-# -Option 2 :
-# compute Q_hom & B_eff by running 'Cell-Problem'
-#
-# -> CLASSIFY ...
-#
-# OUTPUT: Minimizer G, angle , type, curvature
-# -----------------------------------------------------------------------
-#
-#
-# def GetMuGamma(beta,theta,gamma,mu1,rho1, InputFilePath = os.path.dirname(os.getcwd()) +"/inputs/computeMuGamma.parset",
-# OutputFilePath = os.path.dirname(os.getcwd()) + "/outputs/outputMuGamma.txt" ):
-# # ------------------------------------ get mu_gamma ------------------------------
-# # ---Scenario 1.1: extreme regimes
-# if gamma == '0':
-# print('extreme regime: gamma = 0')
-# mu_gamma = (1.0/6.0)*arithmeticMean(mu1, beta, theta) # = q2
-# print("mu_gamma:", mu_gamma)
-# elif gamma == 'infinity':
-# print('extreme regime: gamma = infinity')
-# mu_gamma = (1.0/6.0)*harmonicMean(mu1, beta, theta) # = q1
-# print("mu_gamma:", mu_gamma)
-# else:
-# # --- Scenario 1.2: compute mu_gamma with 'Compute_MuGamma' (much faster than running full Cell-Problem)
-# # print("Run computeMuGamma for Gamma = ", gamma)
-# with open(InputFilePath, 'r') as file:
-# filedata = file.read()
-# filedata = re.sub('(?m)^gamma=.*','gamma='+str(gamma),filedata)
-# # filedata = re.sub('(?m)^alpha=.*','alpha='+str(alpha),filedata)
-# filedata = re.sub('(?m)^beta=.*','beta='+str(beta),filedata)
-# filedata = re.sub('(?m)^theta=.*','theta='+str(theta),filedata)
-# filedata = re.sub('(?m)^mu1=.*','mu1='+str(mu1),filedata)
-# filedata = re.sub('(?m)^rho1=.*','rho1='+str(rho1),filedata)
-# f = open(InputFilePath,'w')
-# f.write(filedata)
-# f.close()
-# # --- Run Cell-Problem
-#
-# # Check Time
-# # t = time.time()
-# # subprocess.run(['./build-cmake/src/Cell-Problem', './inputs/cellsolver.parset'],
-# # capture_output=True, text=True)
-# # --- Run Cell-Problem_muGama -> faster
-# # subprocess.run(['./build-cmake/src/Cell-Problem_muGamma', './inputs/cellsolver.parset'],
-# # capture_output=True, text=True)
-# # --- Run Compute_muGamma (2D Problem much much faster)
-#
-# subprocess.run(['./build-cmake/src/Compute_MuGamma', './inputs/computeMuGamma.parset'],
-# capture_output=True, text=True)
-# # print('elapsed time:', time.time() - t)
-#
-# #Extract mu_gamma from Output-File TODO: GENERALIZED THIS FOR QUANTITIES OF INTEREST
-# with open(OutputFilePath, 'r') as file:
-# output = file.read()
-# tmp = re.search(r'(?m)^mu_gamma=.*',output).group() # Not necessary for Intention of Program t output Minimizer etc.....
-# s = re.findall(r"[-+]?\d*\.\d+|\d+", tmp)
-# mu_gamma = float(s[0])
-# # print("mu_gamma:", mu_gammaValue)
-# # --------------------------------------------------------------------------------------
-# return mu_gamma
-#
-
-
-
-# ----------- SETUP PATHS
-# InputFile = "/inputs/cellsolver.parset"
-# OutputFile = "/outputs/output.txt"
-InputFile = "/inputs/computeMuGamma.parset"
-OutputFile = "/outputs/outputMuGamma.txt"
-# --------- Run from src folder:
-path_parent = os.path.dirname(os.getcwd())
-os.chdir(path_parent)
-path = os.getcwd()
-print(path)
-InputFilePath = os.getcwd()+InputFile
-OutputFilePath = os.getcwd()+OutputFile
-print("InputFilepath: ", InputFilePath)
-print("OutputFilepath: ", OutputFilePath)
-print("Path: ", path)
-
-
-# -------------------------- Input Parameters --------------------
-mu1 = 10.0 # TODO : here must be the same values as in the Parset for computeMuGamma
-rho1 = 1.0
-alpha = 2.0
-beta = 2.0
-# beta = 10.0
-theta = 1.0/4.0
-#set gamma either to 1. '0' 2. 'infinity' or 3. a numerical positive value
-gamma = '0'
-# gamma = 'infinity'
-# gamma = 0.5
-# gamma = 0.25
-# gamma = 1.0
-
-# gamma = 5.0
-
-#added
-# lambda1 = 10.0
-lambda1 = 0.0
-
-
-
-
-
-print('---- Input parameters: -----')
-print('mu1: ', mu1)
-print('rho1: ', rho1)
-print('alpha: ', alpha)
-print('beta: ', beta)
-print('theta: ', theta)
-print('gamma:', gamma)
-
-print('lambda1: ', lambda1)
-print('----------------------------')
-# ----------------------------------------------------------------
-
-
-# gamma_min = 0.5
-# gamma_max = 1.0
-#
-# # gamma_min = 1
-# # gamma_max = 1
-# Gamma_Values = np.linspace(gamma_min, gamma_max, num=3)
-# # #
-# # # Gamma_Values = np.linspace(gamma_min, gamma_max, num=13) # TODO variable Input Parameters...alpha,beta...
-# print('(Input) Gamma_Values:', Gamma_Values)
-# # #
-# for gamma in Gamma_Values:
-
-
- # muGamma = GetMuGamma(beta,theta,gamma,mu1,rho1,InputFilePath)
- # # muGamma = GetMuGamma(beta,theta,gamma,mu1,rho1)
- # print('Test MuGamma:', muGamma)
-
- # ------- Options --------
- # print_Cases = True
- # print_Output = True
-
- #TODO
-# generalCase = True #Read Output from Cell-Problem instead of using Lemma1.4 (special case)
-generalCase = False
-
-# make_3D_plot = True
-# make_3D_PhaseDiagram = True
-make_2D_plot = False
-# make_2D_PhaseDiagram = False
-make_3D_plot = False
-make_3D_PhaseDiagram = False
-# make_2D_plot = True
-make_2D_PhaseDiagram = True
-
-
-# --- Define effective quantities: q1, q2 , q3 = mu_gamma, q12 ---
-# q1 = harmonicMean(mu1, beta, theta)
-# q2 = arithmeticMean(mu1, beta, theta)
-# --- Set q12
-# q12 = 0.0 # (analytical example) # TEST / TODO read from Cell-Output
-
-
-
-
-
-# b1 = prestrain_b1(rho1, beta, alpha, theta)
-# b2 = prestrain_b2(rho1, beta, alpha, theta)
-#
-# print('---- Input parameters: -----')
-# print('mu1: ', mu1)
-# print('rho1: ', rho1)
-# print('alpha: ', alpha)
-# print('beta: ', beta)
-# print('theta: ', theta)
-# print("q1: ", q1)
-# print("q2: ", q2)
-# print("mu_gamma: ", mu_gamma)
-# print("q12: ", q12)
-# print("b1: ", b1)
-# print("b2: ", b2)
-# print('----------------------------')
-# print("machine epsilon", sys.float_info.epsilon)
-
-# G, angle, type, kappa = classifyMin(q1, q2, mu_gamma, q12, b1, b2, print_Cases, print_Output)
-# Test = f(1,2 ,q1,q2,mu_gamma,q12,b1,b2)
-# print("Test", Test)
-
-# ---------------------- MAKE PLOT / Write to VTK------------------------------------------------------------------------------
-
-# SamplePoints_3D = 10 # Number of sample points in each direction
-# SamplePoints_2D = 10 # Number of sample points in each direction
-SamplePoints_3D = 300 # Number of sample points in each direction
-SamplePoints_2D = 100 # Number of sample points in each direction
-
-
-
-if make_3D_PhaseDiagram:
- alphas_ = np.linspace(-20, 20, SamplePoints_3D)
- betas_ = np.linspace(0.01,40.01,SamplePoints_3D)
- thetas_ = np.linspace(0.01,0.99,SamplePoints_3D)
- # print('type of alphas', type(alphas_))
- # print('Test:', type(np.array([mu_gamma])) )
- alphas, betas, thetas = np.meshgrid(alphas_, betas_, thetas_, indexing='ij')
- classifyMin_anaVec = np.vectorize(classifyMin_ana)
-
- # Get MuGamma values ...
- GetMuGammaVec = np.vectorize(GetMuGamma)
- muGammas = GetMuGammaVec(betas, thetas, gamma, mu1, rho1)
- # Classify Minimizers....
- G, angles, Types, curvature = classifyMin_anaVec(alphas, betas, thetas, muGammas, mu1, rho1) # Sets q12 to zero!!!
- # print('size of G:', G.shape)
- # print('G:', G)
- # Out = classifyMin_anaVec(alphas,betas,thetas)
- # T = Out[2]
- # --- Write to VTK
-
- GammaString = str(gamma)
- VTKOutputName = "outputs/PhaseDiagram3D" + "Gamma" + GammaString
- gridToVTK(VTKOutputName , alphas, betas, thetas, pointData = {'Type': Types, 'angles': angles, 'curvature': curvature} )
- print('Written to VTK-File:', VTKOutputName )
-
-if make_2D_PhaseDiagram:
- # alphas_ = np.linspace(-20, 20, SamplePoints_2D)
- # thetas_ = np.linspace(0.01,0.99,SamplePoints_2D)
- # alphas_ = np.linspace(-5, 15, SamplePoints_2D)
- # thetas_ = np.linspace(0.05,0.25,SamplePoints_2D)
-
-
- # good range:
- # alphas_ = np.linspace(9, 10, SamplePoints_2D)
- # thetas_ = np.linspace(0.075,0.14,SamplePoints_2D)
-
- alphas_ = np.linspace(8, 10, SamplePoints_2D)
- thetas_ = np.linspace(0.05,0.16,SamplePoints_2D)
-
- # alphas_ = np.linspace(8, 12, SamplePoints_2D)
- # thetas_ = np.linspace(0.05,0.2,SamplePoints_2D)
- # betas_ = np.linspace(0.01,40.01,1)
- #fix to one value:
- betas_ = 2.0;
- alphas, betas, thetas = np.meshgrid(alphas_, betas_, thetas_, indexing='ij')
-
-
- if generalCase:
- classifyMin_matVec = np.vectorize(classifyMin_mat)
- GetCellOutputVec = np.vectorize(GetCellOutput, otypes=[np.ndarray, np.ndarray])
- Q, B = GetCellOutputVec(alphas,betas,thetas,gamma,mu1,rho1,lambda1, InputFilePath ,OutputFilePath )
-
-
- # print('type of Q:', type(Q))
- # print('Q:', Q)
- G, angles, Types, curvature = classifyMin_matVec(Q,B)
-
- else:
- classifyMin_anaVec = np.vectorize(classifyMin_ana)
- GetMuGammaVec = np.vectorize(GetMuGamma)
- muGammas = GetMuGammaVec(betas,thetas,gamma,mu1,rho1,InputFilePath ,OutputFilePath )
- G, angles, Types, curvature = classifyMin_anaVec(alphas,betas,thetas, muGammas, mu1, rho1) # Sets q12 to zero!!!
- # print('size of G:', G.shape)
- # print('G:', G)
- # print('Types:', Types)
- # Out = classifyMin_anaVec(alphas,betas,thetas)
- # T = Out[2]
- # --- Write to VTK
- # VTKOutputName = + path + "./PhaseDiagram2DNEW"
-
- GammaString = str(gamma)
- VTKOutputName = "outputs/PhaseDiagram2D" + "Gamma_" + GammaString
- gridToVTK(VTKOutputName , alphas, betas, thetas, pointData = {'Type': Types, 'angles': angles, 'curvature': curvature} )
- print('Written to VTK-File:', VTKOutputName )
-
-
-# --- Make 3D Scatter plot
-if(make_3D_plot or make_2D_plot):
- fig = plt.figure()
- ax = fig.add_subplot(111, projection='3d')
- colors = cm.plasma(Types)
- # if make_2D_plot: pnt3d=ax.scatter(alphas,thetas,c=Types.flat)
- # if make_3D_plot: pnt3d=ax.scatter(alphas,betas,thetas,c=Types.flat)
- if make_2D_plot: pnt3d=ax.scatter(alphas,thetas,c=angles.flat)
- if make_3D_plot: pnt3d=ax.scatter(alphas,betas,thetas,c=angles.flat)
- # cbar=plt.colorbar(pnt3d)
- # cbar.set_label("Values (units)")
- plt.axvline(x = 8, color = 'b', linestyle = ':', label='$q_1$')
- plt.axhline(y = 0.083333333, color = 'b', linestyle = ':', label='$q_1$')
-
- ax.set_xlabel('alpha')
- ax.set_ylabel('beta')
- if make_3D_plot: ax.set_zlabel('theta')
- plt.show()
- # plt.savefig('common_labels.png', dpi=300)
- # print('T:', T)
- # print('Type 1 occured here:', np.where(T == 1))
- # print('Type 2 occured here:', np.where(T == 2))
-
-
- # print(alphas_)
- # print(betas_)
-
-
-
-
-
-# ALTERNATIVE
-# colors = ("red", "green", "blue")
-# groups = ("Type 1", "Type2", "Type3")
-#
-# # Create plot
-# fig = plt.figure()
-# ax = fig.add_subplot(1, 1, 1)
-#
-# for data, color, group in zip(Types, colors, groups):
-# # x, y = data
-# ax.scatter(alphas, thetas, alpha=0.8, c=color, edgecolors='none', label=group)
-#
-# plt.title('Matplot scatter plot')
-# plt.legend(loc=2)
-# plt.show()
diff --git a/src/PhaseDiagram.py b/src/PhaseDiagram.py
index f82a4cb64d992f9564d046e79204aa6dbda55014..85cf67d3c060ff5d83f703ad23434709b60b4517 100644
--- a/src/PhaseDiagram.py
+++ b/src/PhaseDiagram.py
@@ -17,6 +17,16 @@ from vtk.util import numpy_support
from pyevtk.hl import gridToVTK
import time
+
+from chart_studio import plotly
+import plotly.graph_objs as go
+
+import mayavi.mlab as mlab
+from mayavi.api import OffScreenEngine
+
+import scipy.signal
+# mlab.options.offscreen = True
+
# print(sys.executable)
# --------------------------------------------------------------------
@@ -119,7 +129,7 @@ beta = 2.0
theta = 1.0/4.0
#set gamma either to 1. '0' 2. 'infinity' or 3. a numerical positive value
gamma = '0'
-# gamma = 'infinity'
+gamma = 'infinity'
# gamma = 0.5
# gamma = 0.25
# gamma = 1.0
@@ -130,7 +140,8 @@ gamma = '0'
# lambda1 = 10.0
lambda1 = 0.0
-
+#Test:
+# rho1 = -1.0
@@ -159,8 +170,8 @@ print('----------------------------')
print('type of gamma:', type(gamma))
# # #
-Gamma_Values = ['0', 'infinity']
-# Gamma_Values = ['infinity']
+# Gamma_Values = ['0', 'infinity']
+Gamma_Values = ['infinity']
# Gamma_Values = ['0']
print('(Input) Gamma_Values:', Gamma_Values)
@@ -180,14 +191,14 @@ for gamma in Gamma_Values:
# generalCase = True #Read Output from Cell-Problem instead of using Lemma1.4 (special case)
generalCase = False
- # make_3D_plot = True
- # make_3D_PhaseDiagram = True
+ make_3D_plot = True
+ make_3D_PhaseDiagram = True
make_2D_plot = False
make_2D_PhaseDiagram = False
- make_3D_plot = False
- make_3D_PhaseDiagram = False
+ # make_3D_plot = False
+ # make_3D_PhaseDiagram = False
# make_2D_plot = True
- make_2D_PhaseDiagram = True
+ # make_2D_PhaseDiagram = True
#
# --- Define effective quantities: q1, q2 , q3 = mu_gamma, q12 ---
@@ -227,13 +238,15 @@ for gamma in Gamma_Values:
# SamplePoints_3D = 10 # Number of sample points in each direction
# SamplePoints_2D = 10 # Number of sample points in each direction
SamplePoints_3D = 300 # Number of sample points in each direction
- # SamplePoints_3D = 150 # Number of sample points in each direction
+ SamplePoints_3D = 150 # Number of sample points in each direction
SamplePoints_3D = 100 # Number of sample points in each direction
+ # SamplePoints_3D = 50 # Number of sample points in each direction
# SamplePoints_3D = 200 # Number of sample points in each direction
# SamplePoints_3D = 400 # Number of sample points in each direction
# SamplePoints_2D = 7500 # Number of sample points in each direction
SamplePoints_2D = 4000 # 4000 # Number of sample points in each direction
- SamplePoints_2D = 400 # 4000 # Number of sample points in each direction
+ # SamplePoints_2D = 400 # 4000 # Number of sample points in each direction
+ # SamplePoints_2D = 1000 # 4000 # Number of sample points in each direction
if make_3D_PhaseDiagram:
alphas_ = np.linspace(-20, 20, SamplePoints_3D)
@@ -314,9 +327,9 @@ for gamma in Gamma_Values:
#intermediate Values
- alphas_ = np.linspace(-2, 1, SamplePoints_2D)
- thetas_ = np.linspace(0.4,0.6,SamplePoints_2D)
- betas_ = 10.0;
+ # alphas_ = np.linspace(-2, 1, SamplePoints_2D)
+ # thetas_ = np.linspace(0.4,0.6,SamplePoints_2D)
+ # betas_ = 10.0;
# TEST
# alphas_ = np.linspace(-8, 8, SamplePoints_2D)
@@ -363,18 +376,73 @@ for gamma in Gamma_Values:
ax = fig.add_subplot(111, projection='3d')
colors = cm.plasma(Types)
# if make_2D_plot: pnt3d=ax.scatter(alphas,thetas,c=Types.flat)
- # if make_3D_plot: pnt3d=ax.scatter(alphas,betas,thetas,c=Types.flat)
+ if make_3D_plot: pnt3d=ax.scatter(alphas,betas,thetas,c=Types.flat)
if make_2D_plot: pnt3d=ax.scatter(alphas,thetas,c=angles.flat)
- if make_3D_plot: pnt3d=ax.scatter(alphas,betas,thetas,c=angles.flat)
+
# cbar=plt.colorbar(pnt3d)
# cbar.set_label("Values (units)")
- plt.axvline(x = 8, color = 'b', linestyle = ':', label='$q_1$')
- plt.axhline(y = 0.083333333, color = 'b', linestyle = ':', label='$q_1$')
+ # plt.axvline(x = 8, color = 'b', linestyle = ':', label='$q_1$')
+ # plt.axhline(y = 0.083333333, color = 'b', linestyle = ':', label='$q_1$')
+
+ # if make_3D_plot: pnt3d=ax.scatter(alphas,betas,thetas,c=angles.flat)
+ # if make_3D_plot: fig = go.Figure(data=[go.Surface(z=thetas, x=alphas, y=betas, color=angles.flat)])
+ #### PLOTLY:
+ # print('angles.flatten()',angles.flatten())
+ # fig = go.Figure(data=go.Isosurface(
+ # x=alphas.flatten(),
+ # y=betas.flatten(),
+ # z=thetas.flatten(),
+ # value=angles.flatten(),
+ # isomin=0,
+ # isomax=1.565,
+ # opacity=1.0,
+ # colorscale='agsunset',
+ # flatshading = True
+ # # caps=dict(x_show=False, y_show=False)
+ # ))
+ # fig.show()
+
+ # ----TEST SAVITZKY_GOLAY FILTER
+ # zhat = scipy.signal.savgol_filter(angles.flatten(), 5, 4) # window size 51, polynomial order 3
+ #
+ # fig = go.Figure(data=go.Volume(
+ # x=alphas.flatten(),
+ # y=betas.flatten(),
+ # z=thetas.flatten(),
+ # value=zhat,
+ # isomin=0.0,
+ # isomax=1.56,
+ # opacity=0.1, # needs to be small to see through all surfaces
+ # surface_count=17, # needs to be a large number for good volume rendering
+ # colorscale='RdBu'
+ # ))
+ # fig.show()
+
+
+ ## --------------------------------
+ # alphas = np.array(alphas)
+ # print('alphas.shape:',np.shape(alphas))
+ # #### ------- MAYAVI:
+ # # s = angles.flatten()
+ # s = angles
+ # src = mlab.pipeline.scalar_field(s)
+ # mlab.pipeline.iso_surface(src, contours=[s.min()+0.1*s.ptp(), ], opacity=0.3)
+ # mlab.pipeline.iso_surface(src, contours=[s.max()-0.1*s.ptp(), ],)
+ # # mlab.outline()
+ # # mlab.mesh(alphas,betas,thetas)
+ # mlab.colorbar( orientation='vertical', nb_labels=5)
+ # # mlab.orientation_axes()
+ # mlab.show()
+ ### ---------------
+
+
+
+
ax.set_xlabel('alpha')
ax.set_ylabel('beta')
if make_3D_plot: ax.set_zlabel('theta')
- plt.show()
+ # plt.show()
# plt.savefig('common_labels.png', dpi=300)
# print('T:', T)
# print('Type 1 occured here:', np.where(T == 1))
diff --git a/src/PhaseDiagram_ContourSubPlots.py b/src/PhaseDiagram_ContourSubPlots.py
index 59a1a421f3788f05ee57bbd32e168c58866e4d3b..125cd43a7d915f96a60944bdfb852a3b06a02210 100644
--- a/src/PhaseDiagram_ContourSubPlots.py
+++ b/src/PhaseDiagram_ContourSubPlots.py
@@ -240,8 +240,8 @@ for gamma in Gamma_Values:
# SamplePoints_2D = 400 # 4000 # Number of sample points in each direction
# SamplePoints_2D = 500 # 4000 # Number of sample points in each direction
# SamplePoints_2D = 100 # 4000 # Number of sample points in each direction
- SamplePoints_2D = 2000 # 4000 # Number of sample points in each direction
- # SamplePoints_2D = 1000 # 4000 # Number of sample points in each direction
+ # SamplePoints_2D = 2000 # 4000 # Number of sample points in each direction
+ SamplePoints_2D = 1000 # 4000 # Number of sample points in each direction
if make_3D_PhaseDiagram:
alphas_ = np.linspace(-20, 20, SamplePoints_3D)
@@ -382,8 +382,8 @@ if(make_3D_plot or make_2D_plot):
width = 6.28
- height = width / 1.618
- # height = width / 2.5
+ # height = width / 1.618
+ height = width / 2.5
# fig, ax = plt.subplots()
fig,ax = plt.subplots(nrows=1,ncols=2,figsize=(width,height), sharey=True)
# ax = plt.axes((0.15,0.21 ,0.8,0.75))
@@ -405,6 +405,8 @@ if(make_3D_plot or make_2D_plot):
# ax.clabel(CS, inline=True, fontsize=7.5)
# # ax.set_title('Simplest default with labels')
+ # matplotlib.rcParams['contour.linestyles'] = 'dashed'
+
CS_0 = ax[0].contourf(alphas, thetas, angles_0, 10, cmap=plt.cm.coolwarm)
# CS = ax.contourf(alphas, thetas, angles, 10, cmap='RdBu')
@@ -430,9 +432,12 @@ if(make_3D_plot or make_2D_plot):
CS_12 = ax[1].contour(CS_1, levels=CS_1.levels[::2], colors='black',inline=True, linewidths=(0.5,))
# ax.clabel(CS2, inline=True, fontsize=9, colors='black')
# ax.clabel(CS2, inline=True, inline_spacing=3, rightside_up=True, colors='k', fontsize=8)
+ # manual_locations = [
+ # (-0.5, 0.3), (-0.7, 0.4), (-0.8, 0.5), (-0.9, 0.6), (-1,0.7)]
manual_locations = [
- (-0.5, 0.3), (-0.7, 0.4), (-0.8, 0.5), (-0.9, 0.6), (-1,0.7)]
- ax[1].clabel(CS_12, inline=True, fontsize=10, colors='black', manual=manual_locations)
+ (-0.5, 0.15), (-0.7, 0.3), (-0.8, 0.45), (-0.9, 0.6), (-1,0.75)]
+ # ax[1].clabel(CS_12, inline=True, fontsize=10, colors='black', manual=manual_locations)
+ ax[1].clabel(CS_12, inline=True, fontsize=8, colors='black', manual=manual_locations)
# ax[1].clabel(CS_12, inline=True, fontsize=8, colors='black')
@@ -456,7 +461,8 @@ if(make_3D_plot or make_2D_plot):
# cbar = fig.colorbar(CS_1, ax=ax[:], shrink=0.8, location='right', ticks=[0, np.pi/8, np.pi/4, 3*np.pi/8 , np.pi/2 ])
cbar.ax.set_yticklabels(['$0$',r'$\pi/8$', r'$\pi/4$' ,r'$3\pi/8$' , r'$\pi/2$'])
- cbar.ax.set_title(r'angle $\alpha$')
+ # cbar.ax.set_title(r'angle $\alpha$')
+ cbar.ax.set_title(r'$\alpha$')
# cbar=plt.colorbar(pnt3d)
# cbar.set_label("Values (units)")
# plt.axvline(x = 8, color = 'b', linestyle = ':', label='$q_1$')
@@ -485,7 +491,7 @@ if(make_3D_plot or make_2D_plot):
# plt.subplots_adjust(bottom=0.2)
# plt.subplots_adjust(wspace=0.22, hspace=0.1)
plt.subplots_adjust(hspace=0.15, wspace=0.1)
-
+ plt.subplots_adjust(bottom=0.2)
# fig.subplots_adjust(right=0.75)
diff --git a/src/PhaseDiagram_CurvContourSubPlots.py b/src/PhaseDiagram_CurvContourSubPlots.py
new file mode 100644
index 0000000000000000000000000000000000000000..4846876127a52ffcf88a817fad62921a39122e1f
--- /dev/null
+++ b/src/PhaseDiagram_CurvContourSubPlots.py
@@ -0,0 +1,510 @@
+import numpy as np
+import matplotlib.pyplot as plt
+import sympy as sym
+import math
+import os
+import subprocess
+import fileinput
+import re
+import matlab.engine
+import sys
+from ClassifyMin import *
+from HelperFunctions import *
+# from CellScript import *
+from mpl_toolkits.mplot3d import Axes3D
+import matplotlib.cm as cm
+from vtk.util import numpy_support
+from pyevtk.hl import gridToVTK
+from matplotlib.ticker import MultipleLocator,FormatStrFormatter,MaxNLocator
+
+from mpl_toolkits.axes_grid1.inset_locator import inset_axes
+
+import time
+# print(sys.executable)
+
+# --------------------------------------------------------------------
+# START :
+# INPUT (Parameters): alpha, beta, theta, gamma, mu1, rho1
+#
+# -Option 1 : (Case lambda = 0 => q12 = 0)
+# compute q1,q2,b1,b2 from Formula
+# Option 1.1 :
+# set mu_gamma = 'q1' or 'q2' (extreme regimes: gamma \in {0,\infty})
+# Option 1.2 :
+# compute mu_gamma with 'Compute_MuGamma' (2D problem much faster then Cell-Problem)
+# -Option 2 :
+# compute Q_hom & B_eff by running 'Cell-Problem'
+#
+# -> CLASSIFY ...
+#
+# OUTPUT: Minimizer G, angle , type, curvature
+# -----------------------------------------------------------------------
+#
+#
+# def GetMuGamma(beta,theta,gamma,mu1,rho1, InputFilePath = os.path.dirname(os.getcwd()) +"/inputs/computeMuGamma.parset",
+# OutputFilePath = os.path.dirname(os.getcwd()) + "/outputs/outputMuGamma.txt" ):
+# # ------------------------------------ get mu_gamma ------------------------------
+# # ---Scenario 1.1: extreme regimes
+# if gamma == '0':
+# print('extreme regime: gamma = 0')
+# mu_gamma = (1.0/6.0)*arithmeticMean(mu1, beta, theta) # = q2
+# print("mu_gamma:", mu_gamma)
+# elif gamma == 'infinity':
+# print('extreme regime: gamma = infinity')
+# mu_gamma = (1.0/6.0)*harmonicMean(mu1, beta, theta) # = q1
+# print("mu_gamma:", mu_gamma)
+# else:
+# # --- Scenario 1.2: compute mu_gamma with 'Compute_MuGamma' (much faster than running full Cell-Problem)
+# # print("Run computeMuGamma for Gamma = ", gamma)
+# with open(InputFilePath, 'r') as file:
+# filedata = file.read()
+# filedata = re.sub('(?m)^gamma=.*','gamma='+str(gamma),filedata)
+# # filedata = re.sub('(?m)^alpha=.*','alpha='+str(alpha),filedata)
+# filedata = re.sub('(?m)^beta=.*','beta='+str(beta),filedata)
+# filedata = re.sub('(?m)^theta=.*','theta='+str(theta),filedata)
+# filedata = re.sub('(?m)^mu1=.*','mu1='+str(mu1),filedata)
+# filedata = re.sub('(?m)^rho1=.*','rho1='+str(rho1),filedata)
+# f = open(InputFilePath,'w')
+# f.write(filedata)
+# f.close()
+# # --- Run Cell-Problem
+#
+# # Check Time
+# # t = time.time()
+# # subprocess.run(['./build-cmake/src/Cell-Problem', './inputs/cellsolver.parset'],
+# # capture_output=True, text=True)
+# # --- Run Cell-Problem_muGama -> faster
+# # subprocess.run(['./build-cmake/src/Cell-Problem_muGamma', './inputs/cellsolver.parset'],
+# # capture_output=True, text=True)
+# # --- Run Compute_muGamma (2D Problem much much faster)
+#
+# subprocess.run(['./build-cmake/src/Compute_MuGamma', './inputs/computeMuGamma.parset'],
+# capture_output=True, text=True)
+# # print('elapsed time:', time.time() - t)
+#
+# #Extract mu_gamma from Output-File TODO: GENERALIZED THIS FOR QUANTITIES OF INTEREST
+# with open(OutputFilePath, 'r') as file:
+# output = file.read()
+# tmp = re.search(r'(?m)^mu_gamma=.*',output).group() # Not necessary for Intention of Program t output Minimizer etc.....
+# s = re.findall(r"[-+]?\d*\.\d+|\d+", tmp)
+# mu_gamma = float(s[0])
+# # print("mu_gamma:", mu_gammaValue)
+# # --------------------------------------------------------------------------------------
+# return mu_gamma
+#
+
+
+
+# ----------- SETUP PATHS
+# InputFile = "/inputs/cellsolver.parset"
+# OutputFile = "/outputs/output.txt"
+InputFile = "/inputs/computeMuGamma.parset"
+OutputFile = "/outputs/outputMuGamma.txt"
+# --------- Run from src folder:
+path_parent = os.path.dirname(os.getcwd())
+os.chdir(path_parent)
+path = os.getcwd()
+print(path)
+InputFilePath = os.getcwd()+InputFile
+OutputFilePath = os.getcwd()+OutputFile
+print("InputFilepath: ", InputFilePath)
+print("OutputFilepath: ", OutputFilePath)
+print("Path: ", path)
+
+
+# -------------------------- Input Parameters --------------------
+# mu1 = 10.0 # TODO : here must be the same values as in the Parset for computeMuGamma
+mu1 = 1.0
+rho1 = 1.0
+alpha = 2.0
+beta = 2.0
+# beta = 5.0
+theta = 1.0/4.0
+#set gamma either to 1. '0' 2. 'infinity' or 3. a numerical positive value
+gamma = '0'
+# gamma = 'infinity'
+# gamma = 0.5
+# gamma = 0.25
+# gamma = 1.0
+
+# gamma = 5.0
+
+#added
+# lambda1 = 10.0
+lambda1 = 0.0
+
+#Test:
+# rho1 = -1.0
+
+
+
+print('---- Input parameters: -----')
+print('mu1: ', mu1)
+print('rho1: ', rho1)
+print('alpha: ', alpha)
+print('beta: ', beta)
+print('theta: ', theta)
+print('gamma:', gamma)
+
+print('lambda1: ', lambda1)
+print('----------------------------')
+# ----------------------------------------------------------------
+
+#
+# gamma_min = 0.5
+# gamma_max = 1.0
+#
+# # gamma_min = 1
+# # gamma_max = 1
+# Gamma_Values = np.linspace(gamma_min, gamma_max, num=3)
+# # #
+# # # Gamma_Values = np.linspace(gamma_min, gamma_max, num=13) # TODO variable Input Parameters...alpha,beta...
+# print('(Input) Gamma_Values:', Gamma_Values)
+
+print('type of gamma:', type(gamma))
+# # #
+Gamma_Values = ['0', 'infinity']
+# Gamma_Values = ['infinity']
+# Gamma_Values = ['0']
+print('(Input) Gamma_Values:', Gamma_Values)
+
+for gamma in Gamma_Values:
+
+ print('Run for gamma = ', gamma)
+ print('type of gamma:', type(gamma))
+ # muGamma = GetMuGamma(beta,theta,gamma,mu1,rho1,InputFilePath)
+ # # muGamma = GetMuGamma(beta,theta,gamma,mu1,rho1)
+ # print('Test MuGamma:', muGamma)
+
+ # ------- Options --------
+ # print_Cases = True
+ # print_Output = True
+
+ #TODO
+ # generalCase = True #Read Output from Cell-Problem instead of using Lemma1.4 (special case)
+ generalCase = False
+
+ # make_3D_plot = True
+ # make_3D_PhaseDiagram = True
+ make_2D_plot = False
+ make_2D_PhaseDiagram = False
+ make_3D_plot = False
+ make_3D_PhaseDiagram = False
+ make_2D_plot = True
+ make_2D_PhaseDiagram = True
+ #
+
+ # --- Define effective quantities: q1, q2 , q3 = mu_gamma, q12 ---
+ # q1 = harmonicMean(mu1, beta, theta)
+ # q2 = arithmeticMean(mu1, beta, theta)
+ # --- Set q12
+ # q12 = 0.0 # (analytical example) # TEST / TODO read from Cell-Output
+
+
+
+
+
+ # b1 = prestrain_b1(rho1, beta, alpha, theta)
+ # b2 = prestrain_b2(rho1, beta, alpha, theta)
+ #
+ # print('---- Input parameters: -----')
+ # print('mu1: ', mu1)
+ # print('rho1: ', rho1)
+ # print('alpha: ', alpha)
+ # print('beta: ', beta)
+ # print('theta: ', theta)
+ # print("q1: ", q1)
+ # print("q2: ", q2)
+ # print("mu_gamma: ", mu_gamma)
+ # print("q12: ", q12)
+ # print("b1: ", b1)
+ # print("b2: ", b2)
+ # print('----------------------------')
+ # print("machine epsilon", sys.float_info.epsilon)
+
+ # G, angle, type, kappa = classifyMin(q1, q2, mu_gamma, q12, b1, b2, print_Cases, print_Output)
+ # Test = f(1,2 ,q1,q2,mu_gamma,q12,b1,b2)
+ # print("Test", Test)
+
+ # ---------------------- MAKE PLOT / Write to VTK------------------------------------------------------------------------------
+
+ # SamplePoints_3D = 10 # Number of sample points in each direction
+ # SamplePoints_2D = 10 # Number of sample points in each direction
+ SamplePoints_3D = 300 # Number of sample points in each direction
+ # SamplePoints_3D = 150 # Number of sample points in each direction
+ # SamplePoints_3D = 100 # Number of sample points in each direction
+ # SamplePoints_3D = 200 # Number of sample points in each direction
+ # SamplePoints_3D = 400 # Number of sample points in each direction
+ # SamplePoints_2D = 7500 # Number of sample points in each direction
+ # SamplePoints_2D = 4000 # 4000 # Number of sample points in each direction
+ # SamplePoints_2D = 400 # 4000 # Number of sample points in each direction
+ SamplePoints_2D = 500 # 4000 # Number of sample points in each direction
+ # SamplePoints_2D = 100 # 4000 # Number of sample points in each direction
+ # SamplePoints_2D = 2000 # 4000 # Number of sample points in each direction
+ # SamplePoints_2D = 1000 # 4000 # Number of sample points in each direction
+
+ if make_3D_PhaseDiagram:
+ alphas_ = np.linspace(-20, 20, SamplePoints_3D)
+ # alphas_ = np.linspace(-10, 10, SamplePoints_3D)
+
+ # betas_ = np.linspace(0.01,40.01,SamplePoints_3D) # Full Range
+ # betas_ = np.linspace(0.01,20.01,SamplePoints_3D) # FULL Range
+
+
+
+ # betas_ = np.linspace(0.01,0.99,SamplePoints_3D) # weird part
+ betas_ = np.linspace(1.01,40.01,SamplePoints_3D) #TEST !!!!! For Beta <1 weird tings happen...
+ thetas_ = np.linspace(0.01,0.99,SamplePoints_3D)
+
+
+ # TEST
+ # alphas_ = np.linspace(-2, 2, SamplePoints_3D)
+ # betas_ = np.linspace(1.01,10.01,SamplePoints_3D)
+ # print('betas:', betas_)
+
+ # TEST :
+ # alphas_ = np.linspace(-40, 40, SamplePoints_3D)
+ # betas_ = np.linspace(0.01,80.01,SamplePoints_3D) # Full Range
+
+ # print('type of alphas', type(alphas_))
+ # print('Test:', type(np.array([mu_gamma])) )
+ alphas, betas, thetas = np.meshgrid(alphas_, betas_, thetas_, indexing='ij')
+ classifyMin_anaVec = np.vectorize(classifyMin_ana)
+
+ # Get MuGamma values ...
+ GetMuGammaVec = np.vectorize(GetMuGamma)
+ muGammas = GetMuGammaVec(betas, thetas, gamma, mu1, rho1)
+ # Classify Minimizers....
+ G, angles, Types, curvature = classifyMin_anaVec(alphas, betas, thetas, muGammas, mu1, rho1) # Sets q12 to zero!!!
+
+ # G, angles, Types, curvature = classifyMin_anaVec(alphas, betas, thetas, muGammas, mu1, rho1, True, True)
+ # print('size of G:', G.shape)
+ # print('G:', G)
+
+ # Option to print angles
+ # print('angles:', angles)
+
+
+ # Out = classifyMin_anaVec(alphas,betas,thetas)
+ # T = Out[2]
+ # --- Write to VTK
+
+ GammaString = str(gamma)
+ VTKOutputName = "outputs/PhaseDiagram3D" + "Gamma" + GammaString
+ gridToVTK(VTKOutputName , alphas, betas, thetas, pointData = {'Type': Types, 'angles': angles, 'curvature': curvature} )
+ print('Written to VTK-File:', VTKOutputName )
+
+ if make_2D_PhaseDiagram:
+ # alphas_ = np.linspace(-20, 20, SamplePoints_2D)
+ # alphas_ = np.linspace(0, 1, SamplePoints_2D)
+ thetas_ = np.linspace(0.01,0.99,SamplePoints_2D)
+ alphas_ = np.linspace(-5, 5, SamplePoints_2D)
+ # alphas_ = np.linspace(-5, 15, SamplePoints_2D)
+ # thetas_ = np.linspace(0.05,0.25,SamplePoints_2D)
+
+
+ # good range:
+ # alphas_ = np.linspace(9, 10, SamplePoints_2D)
+ # thetas_ = np.linspace(0.075,0.14,SamplePoints_2D)
+
+ # range used:
+ # alphas_ = np.linspace(8, 10, SamplePoints_2D)
+ # thetas_ = np.linspace(0.05,0.16,SamplePoints_2D)
+
+ # alphas_ = np.linspace(8, 12, SamplePoints_2D)
+ # thetas_ = np.linspace(0.05,0.2,SamplePoints_2D)
+ # betas_ = np.linspace(0.01,40.01,1)
+ #fix to one value:
+ betas_ = 2.0;
+ # betas_ = 10.0;
+ # betas_ = 5.0;
+ # betas_ = 0.5;
+
+
+ #intermediate Values
+ alphas_ = np.linspace(-2, 1, SamplePoints_2D)
+ # thetas_ = np.linspace(0.4,0.6,SamplePoints_2D)
+ # betas_ = 10.0;
+
+ # TEST
+ # alphas_ = np.linspace(-8, 8, SamplePoints_2D)
+ # thetas_ = np.linspace(0.01,0.99,SamplePoints_2D)
+ # betas_ = 1.0; #TEST Problem: disvison by zero if alpha = 9, theta = 0.1 !
+ # betas_ = 0.9;
+ # betas_ = 0.5; #TEST!!!
+ # alphas, betas, thetas = np.meshgrid(alphas_, betas_, thetas_, indexing='ij')
+ betas = betas_
+ alphas, thetas = np.meshgrid(alphas_, thetas_, indexing='ij')
+
+ if generalCase:
+ classifyMin_matVec = np.vectorize(classifyMin_mat)
+ GetCellOutputVec = np.vectorize(GetCellOutput, otypes=[np.ndarray, np.ndarray])
+ Q, B = GetCellOutputVec(alphas,betas,thetas,gamma,mu1,rho1,lambda1, InputFilePath ,OutputFilePath )
+
+
+ # print('type of Q:', type(Q))
+ # print('Q:', Q)
+ G, angles, Types, curvature = classifyMin_matVec(Q,B)
+
+ else:
+ classifyMin_anaVec = np.vectorize(classifyMin_ana)
+ GetMuGammaVec = np.vectorize(GetMuGamma)
+ # muGammas = GetMuGammaVec(betas,thetas,gamma,mu1,rho1,InputFilePath ,OutputFilePath )
+ # G, angles, Types, curvature = classifyMin_anaVec(alphas,betas,thetas, muGammas, mu1, rho1) # Sets q12 to zero!!!
+ muGammas = GetMuGammaVec(betas,thetas,gamma,mu1,rho1,InputFilePath ,OutputFilePath )
+
+ if gamma == '0':
+ G, angles_0, Types, curvature_0 = classifyMin_anaVec(alphas,betas,thetas, muGammas, mu1, rho1) # Sets q12 to zero!!!
+ if gamma == 'infinity':
+ G, angles_inf, Types, curvature_inf = classifyMin_anaVec(alphas,betas,thetas, muGammas, mu1, rho1) # Sets q12 to zero!!!
+
+ # print('size of G:', G.shape)
+ # print('G:', G)
+ # print('Types:', Types)
+ # Out = classifyMin_anaVec(alphas,betas,thetas)
+ # T = Out[2]
+ # --- Write to VTK
+ # VTKOutputName = + path + "./PhaseDiagram2DNEW"
+
+ # print('angles:',angles)
+ # GammaString = str(gamma)
+ # VTKOutputName = "outputs/PhaseDiagram2D" + "Gamma_" + GammaString
+ # gridToVTK(VTKOutputName , alphas, betas, thetas, pointData = {'Type': Types, 'angles': angles, 'curvature': curvature} )
+ # print('Written to VTK-File:', VTKOutputName )
+
+
+# --- Make 3D Scatter plot
+if(make_3D_plot or make_2D_plot):
+ # fig = plt.figure()
+ # ax = fig.add_subplot(111, projection='3d')
+ # colors = cm.plasma(Types)
+ colors = cm.coolwarm(angles_inf)
+
+
+ width = 6.28
+ # height = width / 1.618
+ height = width / 2.5
+ # fig, ax = plt.subplots()
+ fig,ax = plt.subplots(nrows=1,ncols=2,figsize=(width,height), sharey=True)
+ # ax = plt.axes((0.15,0.21 ,0.8,0.75))
+
+
+
+
+ # if make_2D_plot: pnt3d=ax.scatter(alphas,thetas,c=Types.flat)
+ # if make_3D_plot: pnt3d=ax.scatter(alphas,betas,thetas,c=Types.flat)
+ #
+ # if make_2D_plot: pnt3d=ax.scatter(alphas,thetas,c=angles.flat)
+ # if make_3D_plot: pnt3d=ax.scatter(alphas,betas,thetas,c=angles.flat)
+
+
+ # pnt=ax.scatter(alphas,thetas,c=angles,cmap='coolwarm')
+ # # ax.colorbar()
+ # CS = ax.contourf(alphas, thetas, angles,6, cmap=plt.cm.coolwarm, linestyle=dashed)
+ # # CS = ax.contour(alphas, thetas, angles,6, colors='k')
+ # ax.clabel(CS, inline=True, fontsize=7.5)
+ # # ax.set_title('Simplest default with labels')
+
+
+ # CS_0 = ax[0].contourf(alphas, thetas, curvature_0, 10, cmap=plt.cm.coolwarm)
+ CS_0 = ax[0].contourf(alphas, thetas, curvature_0, 10, cmap=plt.cm.gnuplot)
+ # CS = ax.contourf(alphas, thetas, angles, 10, cmap='RdBu')
+ CS_02 = ax[0].contour(CS_0, levels=CS_0.levels[::2], colors='black',inline=True, linewidths=(0.5,))
+ # ax.clabel(CS2, inline=True, fontsize=9, colors='black')
+ # ax.clabel(CS2, inline=True, inline_spacing=3, rightside_up=True, colors='k', fontsize=8)
+ # manual_locations = [
+ # (-0.5, 0.3), (-0.7, 0.4), (-0.8, 0.5), (-0.9, 0.6), (-1,0.7)]
+ manual_locations = [
+ (-0.4, 0.2),(-0.6, 0.3), (-0.7, 0.4), (-0.8, 0.5), (-0.9, 0.6), (-1,0.7)]
+ # ax[0].clabel(CS_02, inline=True, fontsize=6, colors='black', manual=manual_locations)
+ # ax[0].clabel(CS_02, inline=True, fontsize=10, colors='black')
+
+
+
+ # ax.clabel(CS2, CS2.levels, inline=True, fontsize=10)
+ # ax.clabel(CS, fontsize=5, colors='black')
+ # cbar = fig.colorbar(CS,label=r'angle $\alpha$', ticks=[0, np.pi/8, np.pi/4, 3*np.pi/8 , np.pi/2 ])
+ # cbar = fig.colorbar(CS_0, ticks=[0, np.pi/2 ])
+ # cbar.ax.set_yticklabels(['$0$', r'$\pi/2$'])
+ # cbar.ax.set_title(r'angle $\alpha$')
+
+
+ CS_1 = ax[1].contourf(alphas, thetas, curvature_inf, 10, cmap=plt.cm.gnuplot)
+ # CS_1 = ax[1].contourf(alphas, thetas, curvature_inf, 10, cmap=plt.cm.jet)
+ # CS = ax.contourf(alphas, thetas, angles, 10, cmap='RdBu')
+ CS_12 = ax[1].contour(CS_1, levels=CS_1.levels[::2], colors='black',inline=True, linewidths=(0.5,))
+ # ax.clabel(CS2, inline=True, fontsize=9, colors='black')
+ # ax.clabel(CS2, inline=True, inline_spacing=3, rightside_up=True, colors='k', fontsize=8)
+ manual_locations = [
+ (-1.8,0.9), (-1.5,0.4), (-1,0.3), (0,0.15),(0,0.67) ,(0.5,0.75) , (0.5,0.8), (0.8,0.9) ]
+ # ax[1].clabel(CS_12, inline=True, fontsize=10, colors='black', manual=manual_locations)
+ # ax[1].clabel(CS_12, inline=True, fontsize=10, colors='black')
+
+
+ axins1 = inset_axes(ax[1],
+ width="5%", # width = 5% of parent_bbox width
+ height="100%", # height : 50%
+ loc='lower left',
+ bbox_to_anchor=(1.05, 0., 1, 1),
+ bbox_transform=ax[1].transAxes,
+ borderpad=0,
+ )
+
+
+ # cbar = fig.colorbar(CS_1, cax=axins1, ticks=[0, np.pi/8, np.pi/4, 3*np.pi/8 , np.pi/2 ])
+ cbar = fig.colorbar(CS_1, cax=axins1)
+ cbar.ax.tick_params(labelsize=8)
+
+
+ # cbar.ax.set_yticklabels(['$0$',r'$\pi/8$', r'$\pi/4$' ,r'$3\pi/8$' , r'$\pi/2$'])
+ # cbar.ax.set_title(r'angle $\alpha$')
+ # cbar.ax.set_title(r'curvature $\kappa$')
+ cbar.ax.set_title(r'$\kappa$')
+ # cbar=plt.colorbar(pnt3d)
+ # cbar.set_label("Values (units)")
+ # plt.axvline(x = 8, color = 'b', linestyle = ':', label='$q_1$')
+ # plt.axhline(y = 0.083333333, color = 'b', linestyle = ':', label='$q_1$')
+
+ ax[0].set_xlabel(r'$\theta_\rho$',fontsize=10)
+ # ax[0].yaxis.set_major_locator(MultipleLocator(0.1))
+ # ax[0].xaxis.set_major_locator(MultipleLocator(1))
+ ax[0].yaxis.set_major_locator(MultipleLocator(0.1))
+ ax[0].xaxis.set_major_locator(MultipleLocator(0.5))
+ ax[0].set_ylabel(r'$\theta$ ',fontsize=10, rotation=0)
+ ax[0].tick_params(axis='x', labelsize=7 )
+ ax[0].tick_params(axis='y', labelsize=7 )
+
+ ax[1].set_xlabel(r'$\theta_\rho$',fontsize=10)
+ # ax.xaxis.set_minor_locator(MultipleLocator(0.5))
+ # ax[1].yaxis.set_major_locator(MultipleLocator(0.1))
+ # ax[1].xaxis.set_major_locator(MultipleLocator(1))
+ ax[1].yaxis.set_major_locator(MultipleLocator(0.1))
+ ax[1].xaxis.set_major_locator(MultipleLocator(0.5))
+ ax[1].tick_params(axis='x', labelsize=7 )
+ ax[1].tick_params(axis='y', labelsize=7 )
+ # ax.set_ylabel('beta')
+ # ax[1].set_ylabel(r'$\theta$ ',fontsize=10, rotation=0)
+ # if make_3D_plot: ax.set_zlabel('theta')
+ # plt.subplots_adjust(bottom=0.2)
+ # plt.subplots_adjust(wspace=0.22, hspace=0.1)
+ plt.subplots_adjust(hspace=0.15, wspace=0.1)
+ # plt.subplots_adjust(hspace=0.15, wspace=0.0)
+ plt.subplots_adjust(bottom=0.2)
+ # plt.subplots_adjust(right=0.1)
+ # fig.subplots_adjust(right=0.1)
+
+
+ ax[0].grid( linestyle = '--', linewidth = 0.25)
+ ax[1].grid( linestyle = '--', linewidth = 0.25)
+
+
+
+ fig.set_size_inches(width, height)
+ outputName = 'Plot-CurvContour.pdf'
+ fig.savefig(outputName)
+ # fig.savefig('Plot-Contour.pdf')
+ plt.show()
+ # plt.savefig('common_labels.png', dpi=300)
+ # print('T:', T)
+ # print('Type 1 occured here:', np.where(T == 1))
+ # print('Type 2 occured here:', np.where(T == 2))
diff --git a/src/PhaseDiagram_PlotScriptV3.py b/src/PhaseDiagram_PlotScriptV3.py
index 6931af4cfa64b268def1fc45ac10a90e504787b9..e415b54b8cd43ed71491e7a8a579f0def2190076 100644
--- a/src/PhaseDiagram_PlotScriptV3.py
+++ b/src/PhaseDiagram_PlotScriptV3.py
@@ -22,7 +22,8 @@ curvature = 0
hide_redcolor = True
-# hide_redcolor = False
+hide_redcolor = False
+hide_legend = True
gamma = 'infinity'
gamma = '0'
@@ -864,69 +865,140 @@ if gamma == '0':
if hide_redcolor:
# get color transfer function/color map for 'angles'
anglesLUT = GetColorTransferFunction('angles')
- anglesLUT.AutomaticRescaleRangeMode = "Grow and update on 'Apply'"
- anglesLUT.InterpretValuesAsCategories = 1
- anglesLUT.AnnotationsInitialized = 1
- anglesLUT.ShowCategoricalColorsinDataRangeOnly = 0
- anglesLUT.RescaleOnVisibilityChange = 0
anglesLUT.EnableOpacityMapping = 1
- anglesLUT.RGBPoints = [0.0, 0.23137254902, 0.298039215686, 0.752941176471, 0.9632241725921631, 0.865, 0.865, 0.865, 1.5707963267948966, 0.705882352941, 0.0156862745098, 0.149019607843]
- anglesLUT.UseLogScale = 0
- anglesLUT.ColorSpace = 'Diverging'
- anglesLUT.UseBelowRangeColor = 0
- anglesLUT.BelowRangeColor = [0.0, 0.0, 0.0]
- anglesLUT.UseAboveRangeColor = 0
- anglesLUT.AboveRangeColor = [0.5, 0.5, 0.5]
- anglesLUT.NanColor = [1.0, 1.0, 0.0]
- anglesLUT.NanOpacity = 1.0
- anglesLUT.Discretize = 1
- anglesLUT.NumberOfTableValues = 256
+ anglesLUT.RGBPoints = [0.0, 0.12549, 0.0, 0.380392, 0.03926990816987245, 0.113725, 0.0235294, 0.45098, 0.0785398163397449, 0.105882, 0.0509804, 0.509804, 0.11780972450961717, 0.0392157, 0.0392157, 0.560784, 0.15707963267948963, 0.0313725, 0.0980392, 0.6, 0.19634954084936207, 0.0431373, 0.164706, 0.639216, 0.2356194490192345, 0.054902, 0.243137, 0.678431, 0.27488935718910695, 0.054902, 0.317647, 0.709804, 0.31415926535897926, 0.0509804, 0.396078, 0.741176, 0.35342917352885167, 0.0392157, 0.466667, 0.768627, 0.39269908169872414, 0.0313725, 0.537255, 0.788235, 0.450920647551377, 0.0313725, 0.615686, 0.811765, 0.5001541168221094, 0.0235294, 0.709804, 0.831373, 0.5470439579732639, 0.0509804, 0.8, 0.85098, 0.581428689566804, 0.0705882, 0.854902, 0.870588, 0.618940876646993, 0.262745, 0.901961, 0.862745, 0.6478560954306335, 0.423529, 0.941176, 0.87451, 0.6845860259400787, 0.572549, 0.964706, 0.835294, 0.7119383023785582, 0.658824, 0.980392, 0.843137, 0.7361646941267158, 0.764706, 0.980392, 0.866667, 0.7596088293041297, 0.827451, 0.980392, 0.886275, 0.7838273670706534, 0.913725, 0.988235, 0.937255, 0.7853981633974483, 1.0, 1.0, 1.0, 0.7869689597242432, 0.988235, 0.980392, 0.870588, 0.8111874974907669, 0.992157, 0.964706, 0.713725, 0.8322880045486029, 0.988235, 0.956863, 0.643137, 0.8729260763191136, 0.980392, 0.917647, 0.509804, 0.9127818915188803, 0.968627, 0.87451, 0.407843, 0.9495118220283256, 0.94902, 0.823529, 0.321569, 0.9817477042468103, 0.929412, 0.776471, 0.278431, 1.0210176124166828, 0.909804, 0.717647, 0.235294, 1.0602875205865552, 0.890196, 0.658824, 0.196078, 1.0995574287564276, 0.878431, 0.619608, 0.168627, 1.1388273369263, 0.870588, 0.54902, 0.156863, 1.1780972450961724, 0.85098, 0.47451, 0.145098, 1.2173671532660448, 0.831373, 0.411765, 0.133333, 1.2566370614359172, 0.811765, 0.345098, 0.113725, 1.2959069696057897, 0.788235, 0.266667, 0.0941176, 1.335176877775662, 0.741176, 0.184314, 0.0745098, 1.3744467859455345, 0.690196, 0.12549, 0.0627451, 1.413716694115407, 0.619608, 0.0627451, 0.0431373, 1.4571852684020996, 0.4, 0.00392157, 0.101961, 1.5707963267948966, 0.8313725490196079, 0.0, 0.0392156862745098]
+ anglesLUT.ColorSpace = 'Lab'
+ anglesLUT.NanColor = [0.250004, 0.0, 0.0]
anglesLUT.ScalarRangeInitialized = 1.0
- anglesLUT.HSVWrap = 0
- anglesLUT.VectorComponent = 0
- anglesLUT.VectorMode = 'Magnitude'
- anglesLUT.AllowDuplicateScalars = 1
- anglesLUT.Annotations = ['1.5707963267948966', '$\\pi / 2$', '0', '0', '0', '0', '1.5707963267948966', '1.5708']
- anglesLUT.ActiveAnnotatedValues = ['0']
- anglesLUT.IndexedColors = [0.8313725490196079, 0.0, 0.0392156862745098, 0.12549019607843137, 0.0, 0.3803921568627451, 0.7058823529411765, 0.01568627450980392, 0.14901960784313725, 0.8313725490196079, 0.0, 0.0392156862745098]
- anglesLUT.IndexedOpacities = [0.1, 1.0, 1.0, 1.0]
+ anglesLUT.Annotations = ['1.57', '$\\pi / 2$', '0.78', '$\\pi/4$', '0', '0']
+ anglesLUT.IndexedColors = [1.0, 1.0, 1.0, 1.0, 0.0, 0.0, 1.0, 0.0, 0.0]
+ anglesLUT.IndexedOpacities = [1.0, 1.0, 1.0]
- # Properties modified on anglesLUT
- anglesLUT.Annotations = ['1.5707963267948966', '$\\pi / 2$', '0', '0']
- anglesLUT.IndexedColors = [0.8313725490196079, 0.0, 0.0392156862745098, 0.12549019607843137, 0.0, 0.3803921568627451, 0.8313725490196079, 0.0, 0.0392156862745098]
- anglesLUT.IndexedOpacities = [0.1, 1.0, 1.0]
+ # Apply a preset using its name. Note this may not work as expected when presets have duplicate names.
+ anglesLUT.ApplyPreset('Preset', True)
# get opacity transfer function/opacity map for 'angles'
anglesPWF = GetOpacityTransferFunction('angles')
- anglesPWF.Points = [0.0, 0.136764707416296, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
- anglesPWF.AllowDuplicateScalars = 1
- anglesPWF.UseLogScale = 0
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.10294117778539658, 0.5, 0.0]
anglesPWF.ScalarRangeInitialized = 1
- # Properties modified on anglesLUT
- anglesLUT.Annotations = ['1.5707963267948966', '$\\pi / 2$', '0', '0']
- anglesLUT.IndexedColors = [0.8313725490196079, 0.0, 0.0392156862745098, 0.12549019607843137, 0.0, 0.3803921568627451]
- anglesLUT.IndexedOpacities = [0.1, 1.0]
+ # Apply a preset using its name. Note this may not work as expected when presets have duplicate names.
+ anglesPWF.ApplyPreset('Preset', True)
+
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.4445649345539659, 1.0, 0.5, 0.0, 0.7310624366906182, 1.0, 0.5, 0.0, 0.9879222016222671, 1.0, 0.5, 0.0, 1.254661087453241, 0.9926470518112183, 0.5, 0.0, 1.5707963267948966, 0.07352941483259201, 0.5, 0.0]
# Properties modified on anglesLUT
- anglesLUT.IndexedColors = [1.0, 1.0, 1.0, 0.12549019607843137, 0.0, 0.3803921568627451]
+ anglesLUT.RGBPoints = [0.0, 0.0, 0.0, 1.0, 0.0, 0.17254901960784313, 0.043137254901960784, 0.9215686274509803, 0.0, 0.785929, 0.247056, 0.295477, 0.0, 0.17254901960784313, 0.043137254901960784, 0.9215686274509803, 0.266739073084488, 0.41568627450980394, 0.00392156862745098, 0.9686274509803922, 0.4198669450521392, 0.48627450980392156, 0.0, 0.9725490196078431, 0.7755188552446091, 1.0, 0.058823529411764705, 0.984313725490196, 1.2052651084495876, 1.0, 0.0196078431372549, 0.14901960784313725, 1.5707963267948966, 1.0, 0.0, 0.01568627450980392]
# Properties modified on anglesLUT
- anglesLUT.IndexedOpacities = [0.0, 1.0]
+ anglesLUT.RGBPoints = [0.0, 0.0, 0.0, 1.0, 0.0, 0.17254901960784313, 0.043137254901960784, 0.9215686274509803, 0.0, 0.785929, 0.247056, 0.295477, 0.0, 0.17254901960784313, 0.043137254901960784, 0.9215686274509803, 0.266739073084488, 0.41568627450980394, 0.00392156862745098, 0.9686274509803922, 0.4198669450521392, 0.48627450980392156, 0.0, 0.9725490196078431, 0.7755188552446091, 1.0, 0.058823529411764705, 0.984313725490196, 0.9888578653335571, 1.0, 0.996078431372549, 0.9921568627450981, 1.2052651084495876, 1.0, 0.0196078431372549, 0.14901960784313725, 1.5707963267948966, 1.0, 0.0, 0.01568627450980392]
- # get active source.
- transform1 = GetActiveSource()
+ # Properties modified on anglesLUT
+ anglesLUT.RGBPoints = [0.0, 0.0, 0.0, 1.0, 0.0, 0.17254901960784313, 0.043137254901960784, 0.9215686274509803, 0.0, 0.785929, 0.247056, 0.295477, 0.0, 0.17254901960784313, 0.043137254901960784, 0.9215686274509803, 0.266739073084488, 0.41568627450980394, 0.00392156862745098, 0.9686274509803922, 0.4198669450521392, 0.48627450980392156, 0.0, 0.9725490196078431, 0.7755188552446091, 1.0, 0.058823529411764705, 0.984313725490196, 0.9888578653335571, 1.0, 0.0392156862745098, 0.47058823529411764, 1.2052651084495876, 1.0, 0.0196078431372549, 0.14901960784313725, 1.5707963267948966, 1.0, 0.0, 0.01568627450980392]
- # get active view
- renderView1 = GetActiveViewOrCreate('RenderView')
- # uncomment following to set a specific view size
- # renderView1.ViewSize = [1257, 934]
+ # Properties modified on anglesLUT
+ anglesLUT.RGBPoints = [0.0, 0.0, 0.0, 1.0, 0.0, 0.17254901960784313, 0.043137254901960784, 0.9215686274509803, 0.0, 0.785929, 0.247056, 0.295477, 0.0, 0.17254901960784313, 0.043137254901960784, 0.9215686274509803, 0.266739073084488, 0.41568627450980394, 0.00392156862745098, 0.9686274509803922, 0.4198669450521392, 0.48627450980392156, 0.0, 0.9725490196078431, 0.7755188552446091, 1.0, 0.058823529411764705, 0.984313725490196, 1.0413635969161987, 1.0, 0.0392156862745098, 0.47058823529411764, 1.2052651084495876, 1.0, 0.0196078431372549, 0.14901960784313725, 1.5707963267948966, 1.0, 0.0, 0.01568627450980392]
+ ###
+ # get color transfer function/color map for 'angles'
+ anglesLUT = GetColorTransferFunction('angles')
+ anglesLUT.EnableOpacityMapping = 1
+ anglesLUT.RGBPoints = [0.0, 0.0, 0.0, 1.0, 0.0, 0.17254901960784313, 0.043137254901960784, 0.9215686274509803, 0.0, 0.785929, 0.247056, 0.295477, 0.0, 0.17254901960784313, 0.043137254901960784, 0.9215686274509803, 0.266739073084488, 0.41568627450980394, 0.00392156862745098, 0.9686274509803922, 0.4198669450521392, 0.48627450980392156, 0.0, 0.9725490196078431, 0.7755188552446091, 1.0, 0.058823529411764705, 0.984313725490196, 1.0413635969161987, 1.0, 0.0392156862745098, 0.47058823529411764, 1.2052651084495876, 1.0, 0.0196078431372549, 0.14901960784313725, 1.5707963267948966, 1.0, 0.0, 0.01568627450980392]
+ anglesLUT.NanColor = [0.250004, 0.0, 0.0]
+ anglesLUT.ScalarRangeInitialized = 1.0
+ anglesLUT.Annotations = ['1.57', '$\\pi / 2$', '0.78', '$\\pi/4$', '0', '0']
+ anglesLUT.IndexedColors = [1.0, 1.0, 1.0, 1.0, 0.0, 0.0, 1.0, 0.0, 0.0]
+ anglesLUT.IndexedOpacities = [1.0, 1.0, 1.0]
- # get display properties
- transform1Display = GetDisplayProperties(transform1, view=renderView1)
+ # get opacity transfer function/opacity map for 'angles'
+ anglesPWF = GetOpacityTransferFunction('angles')
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.4445649345539659, 1.0, 0.5, 0.0, 0.7310624366906182, 1.0, 0.5, 0.0, 0.9879222016222671, 1.0, 0.5, 0.0, 1.254661087453241, 0.9926470518112183, 0.5, 0.0, 1.5707963267948966, 0.07352941483259201, 0.5, 0.0]
+ anglesPWF.ScalarRangeInitialized = 1
- # Properties modified on transform1Display
- transform1Display.Opacity = 1.0
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.4445649345539659, 1.0, 0.5, 0.0, 0.7310624366906182, 1.0, 0.5, 0.0, 0.9879222016222671, 1.0, 0.5, 0.0, 1.254661087453241, 0.9926470518112183, 0.5, 0.0, 1.5707963267948966, 0.036764707416296005, 0.5, 0.0]
+
+
+
+
+
+ # ## -------------------------
+ # # get color transfer function/color map for 'angles'
+ # anglesLUT = GetColorTransferFunction('angles')
+ # anglesLUT.AutomaticRescaleRangeMode = "Grow and update on 'Apply'"
+ # anglesLUT.InterpretValuesAsCategories = 1
+ # anglesLUT.AnnotationsInitialized = 1
+ # anglesLUT.ShowCategoricalColorsinDataRangeOnly = 0
+ # anglesLUT.RescaleOnVisibilityChange = 0
+ # anglesLUT.EnableOpacityMapping = 1
+ # anglesLUT.RGBPoints = [0.0, 0.23137254902, 0.298039215686, 0.752941176471, 0.9632241725921631, 0.865, 0.865, 0.865, 1.5707963267948966, 0.705882352941, 0.0156862745098, 0.149019607843]
+ # anglesLUT.UseLogScale = 0
+ # anglesLUT.ColorSpace = 'Diverging'
+ # anglesLUT.UseBelowRangeColor = 0
+ # anglesLUT.BelowRangeColor = [0.0, 0.0, 0.0]
+ # anglesLUT.UseAboveRangeColor = 0
+ # anglesLUT.AboveRangeColor = [0.5, 0.5, 0.5]
+ # anglesLUT.NanColor = [1.0, 1.0, 0.0]
+ # anglesLUT.NanOpacity = 1.0
+ # anglesLUT.Discretize = 1
+ # anglesLUT.NumberOfTableValues = 256
+ # anglesLUT.ScalarRangeInitialized = 1.0
+ # anglesLUT.HSVWrap = 0
+ # anglesLUT.VectorComponent = 0
+ # anglesLUT.VectorMode = 'Magnitude'
+ # anglesLUT.AllowDuplicateScalars = 1
+ # anglesLUT.Annotations = ['1.5707963267948966', '$\\pi / 2$', '0', '0', '0', '0', '1.5707963267948966', '1.5708']
+ # anglesLUT.ActiveAnnotatedValues = ['0']
+ # anglesLUT.IndexedColors = [0.8313725490196079, 0.0, 0.0392156862745098, 0.12549019607843137, 0.0, 0.3803921568627451, 0.7058823529411765, 0.01568627450980392, 0.14901960784313725, 0.8313725490196079, 0.0, 0.0392156862745098]
+ # anglesLUT.IndexedOpacities = [0.1, 1.0, 1.0, 1.0]
+ #
+ # # Properties modified on anglesLUT
+ # anglesLUT.Annotations = ['1.5707963267948966', '$\\pi / 2$', '0', '0']
+ # anglesLUT.IndexedColors = [0.8313725490196079, 0.0, 0.0392156862745098, 0.12549019607843137, 0.0, 0.3803921568627451, 0.8313725490196079, 0.0, 0.0392156862745098]
+ # anglesLUT.IndexedOpacities = [0.1, 1.0, 1.0]
+ #
+ # # get opacity transfer function/opacity map for 'angles'
+ # anglesPWF = GetOpacityTransferFunction('angles')
+ # anglesPWF.Points = [0.0, 0.136764707416296, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+ # anglesPWF.AllowDuplicateScalars = 1
+ # anglesPWF.UseLogScale = 0
+ # anglesPWF.ScalarRangeInitialized = 1
+ #
+ # # Properties modified on anglesLUT
+ # anglesLUT.Annotations = ['1.5707963267948966', '$\\pi / 2$', '0', '0']
+ # anglesLUT.IndexedColors = [0.8313725490196079, 0.0, 0.0392156862745098, 0.12549019607843137, 0.0, 0.3803921568627451]
+ # anglesLUT.IndexedOpacities = [0.1, 1.0]
+ #
+ # # Properties modified on anglesLUT
+ # anglesLUT.IndexedColors = [1.0, 1.0, 1.0, 0.12549019607843137, 0.0, 0.3803921568627451]
+ #
+ # # Properties modified on anglesLUT
+ # anglesLUT.IndexedOpacities = [0.0, 1.0]
+ #
+ # # get active source.
+ # transform1 = GetActiveSource()
+ #
+ # # get active view
+ # renderView1 = GetActiveViewOrCreate('RenderView')
+ # # uncomment following to set a specific view size
+ # # renderView1.ViewSize = [1257, 934]
+ #
+ # # get display properties
+ # transform1Display = GetDisplayProperties(transform1, view=renderView1)
+ #
+ # # Properties modified on transform1Display
+ # transform1Display.Opacity = 1.0
+ #
+ # # Apply a preset using its name. Note this may not work as expected when presets have duplicate names.
+ # anglesPWF.ApplyPreset('Preset 6', True)
+
+
+ if hide_legend:
+ # get display properties
+ transform1Display = GetDisplayProperties(transform1, view=renderView1)
+
+ # hide color bar/color legend
+ transform1Display.SetScalarBarVisibility(renderView1, False)
@@ -1008,7 +1080,7 @@ if gamma == 'infinity': #TEST
anglesLUT.ApplyPreset('Warm to Cool (Extended)', True)
#TEST
- anglesLUT.ApplyPreset('jet', True)
+ # anglesLUT.ApplyPreset('jet', True)
# invert the transfer function
anglesLUT.InvertTransferFunction()
@@ -1111,71 +1183,136 @@ if gamma == 'infinity': #TEST
if hide_redcolor:
- # get display properties
- transform1Display = GetDisplayProperties(transform1, view=renderView1)
-
- # Properties modified on transform1Display
- transform1Display.Opacity = 1.0
-
# get color transfer function/color map for 'angles'
anglesLUT = GetColorTransferFunction('angles')
+ anglesLUT.EnableOpacityMapping = 1
anglesLUT.RGBPoints = [0.0, 0.12549, 0.0, 0.380392, 0.03926990816987245, 0.113725, 0.0235294, 0.45098, 0.0785398163397449, 0.105882, 0.0509804, 0.509804, 0.11780972450961717, 0.0392157, 0.0392157, 0.560784, 0.15707963267948963, 0.0313725, 0.0980392, 0.6, 0.19634954084936207, 0.0431373, 0.164706, 0.639216, 0.2356194490192345, 0.054902, 0.243137, 0.678431, 0.27488935718910695, 0.054902, 0.317647, 0.709804, 0.31415926535897926, 0.0509804, 0.396078, 0.741176, 0.35342917352885167, 0.0392157, 0.466667, 0.768627, 0.39269908169872414, 0.0313725, 0.537255, 0.788235, 0.450920647551377, 0.0313725, 0.615686, 0.811765, 0.5001541168221094, 0.0235294, 0.709804, 0.831373, 0.5470439579732639, 0.0509804, 0.8, 0.85098, 0.581428689566804, 0.0705882, 0.854902, 0.870588, 0.618940876646993, 0.262745, 0.901961, 0.862745, 0.6478560954306335, 0.423529, 0.941176, 0.87451, 0.6845860259400787, 0.572549, 0.964706, 0.835294, 0.7119383023785582, 0.658824, 0.980392, 0.843137, 0.7361646941267158, 0.764706, 0.980392, 0.866667, 0.7596088293041297, 0.827451, 0.980392, 0.886275, 0.7838273670706534, 0.913725, 0.988235, 0.937255, 0.7853981633974483, 1.0, 1.0, 1.0, 0.7869689597242432, 0.988235, 0.980392, 0.870588, 0.8111874974907669, 0.992157, 0.964706, 0.713725, 0.8322880045486029, 0.988235, 0.956863, 0.643137, 0.8729260763191136, 0.980392, 0.917647, 0.509804, 0.9127818915188803, 0.968627, 0.87451, 0.407843, 0.9495118220283256, 0.94902, 0.823529, 0.321569, 0.9817477042468103, 0.929412, 0.776471, 0.278431, 1.0210176124166828, 0.909804, 0.717647, 0.235294, 1.0602875205865552, 0.890196, 0.658824, 0.196078, 1.0995574287564276, 0.878431, 0.619608, 0.168627, 1.1388273369263, 0.870588, 0.54902, 0.156863, 1.1780972450961724, 0.85098, 0.47451, 0.145098, 1.2173671532660448, 0.831373, 0.411765, 0.133333, 1.2566370614359172, 0.811765, 0.345098, 0.113725, 1.2959069696057897, 0.788235, 0.266667, 0.0941176, 1.335176877775662, 0.741176, 0.184314, 0.0745098, 1.3744467859455345, 0.690196, 0.12549, 0.0627451, 1.413716694115407, 0.619608, 0.0627451, 0.0431373, 1.4571852684020996, 0.4, 0.00392157, 0.101961, 1.5707963267948966, 0.8313725490196079, 0.0, 0.0392156862745098]
anglesLUT.ColorSpace = 'Lab'
anglesLUT.NanColor = [0.250004, 0.0, 0.0]
anglesLUT.ScalarRangeInitialized = 1.0
- anglesLUT.Annotations = ['1.5707963267948966', '$\\pi / 2$', '0.78', '$\\pi/4$', '0', '0']
+ anglesLUT.Annotations = ['1.57', '$\\pi / 2$', '0.78', '$\\pi/4$', '0', '0']
anglesLUT.IndexedColors = [1.0, 1.0, 1.0, 1.0, 0.0, 0.0, 1.0, 0.0, 0.0]
anglesLUT.IndexedOpacities = [1.0, 1.0, 1.0]
+ # Apply a preset using its name. Note this may not work as expected when presets have duplicate names.
+ anglesLUT.ApplyPreset('Preset', True)
+
# get opacity transfer function/opacity map for 'angles'
anglesPWF = GetOpacityTransferFunction('angles')
- anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.4117647111415863, 0.5, 0.0]
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.10294117778539658, 0.5, 0.0]
anglesPWF.ScalarRangeInitialized = 1
- # Properties modified on anglesLUT
- anglesLUT.EnableOpacityMapping = 1
+ # Apply a preset using its name. Note this may not work as expected when presets have duplicate names.
+ anglesPWF.ApplyPreset('Preset', True)
# Properties modified on anglesPWF
- anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.41911765933036804, 0.5, 0.0]
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.4445649345539659, 1.0, 0.5, 0.0, 0.7310624366906182, 1.0, 0.5, 0.0, 0.9879222016222671, 1.0, 0.5, 0.0, 1.254661087453241, 0.9926470518112183, 0.5, 0.0, 1.5707963267948966, 0.07352941483259201, 0.5, 0.0]
- # Properties modified on anglesPWF
- anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.375, 0.5, 0.0]
+ # Properties modified on anglesLUT
+ anglesLUT.RGBPoints = [0.0, 0.0, 0.0, 1.0, 0.0, 0.17254901960784313, 0.043137254901960784, 0.9215686274509803, 0.0, 0.785929, 0.247056, 0.295477, 0.0, 0.17254901960784313, 0.043137254901960784, 0.9215686274509803, 0.266739073084488, 0.41568627450980394, 0.00392156862745098, 0.9686274509803922, 0.4198669450521392, 0.48627450980392156, 0.0, 0.9725490196078431, 0.7755188552446091, 1.0, 0.058823529411764705, 0.984313725490196, 1.2052651084495876, 1.0, 0.0196078431372549, 0.14901960784313725, 1.5707963267948966, 1.0, 0.0, 0.01568627450980392]
- # Properties modified on anglesPWF
- anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.3602941334247589, 0.5, 0.0]
+ # Properties modified on anglesLUT
+ anglesLUT.RGBPoints = [0.0, 0.0, 0.0, 1.0, 0.0, 0.17254901960784313, 0.043137254901960784, 0.9215686274509803, 0.0, 0.785929, 0.247056, 0.295477, 0.0, 0.17254901960784313, 0.043137254901960784, 0.9215686274509803, 0.266739073084488, 0.41568627450980394, 0.00392156862745098, 0.9686274509803922, 0.4198669450521392, 0.48627450980392156, 0.0, 0.9725490196078431, 0.7755188552446091, 1.0, 0.058823529411764705, 0.984313725490196, 0.9888578653335571, 1.0, 0.996078431372549, 0.9921568627450981, 1.2052651084495876, 1.0, 0.0196078431372549, 0.14901960784313725, 1.5707963267948966, 1.0, 0.0, 0.01568627450980392]
- # Properties modified on anglesPWF
- anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.14705882966518402, 0.5, 0.0]
+ # Properties modified on anglesLUT
+ anglesLUT.RGBPoints = [0.0, 0.0, 0.0, 1.0, 0.0, 0.17254901960784313, 0.043137254901960784, 0.9215686274509803, 0.0, 0.785929, 0.247056, 0.295477, 0.0, 0.17254901960784313, 0.043137254901960784, 0.9215686274509803, 0.266739073084488, 0.41568627450980394, 0.00392156862745098, 0.9686274509803922, 0.4198669450521392, 0.48627450980392156, 0.0, 0.9725490196078431, 0.7755188552446091, 1.0, 0.058823529411764705, 0.984313725490196, 0.9888578653335571, 1.0, 0.0392156862745098, 0.47058823529411764, 1.2052651084495876, 1.0, 0.0196078431372549, 0.14901960784313725, 1.5707963267948966, 1.0, 0.0, 0.01568627450980392]
+
+ # Properties modified on anglesLUT
+ anglesLUT.RGBPoints = [0.0, 0.0, 0.0, 1.0, 0.0, 0.17254901960784313, 0.043137254901960784, 0.9215686274509803, 0.0, 0.785929, 0.247056, 0.295477, 0.0, 0.17254901960784313, 0.043137254901960784, 0.9215686274509803, 0.266739073084488, 0.41568627450980394, 0.00392156862745098, 0.9686274509803922, 0.4198669450521392, 0.48627450980392156, 0.0, 0.9725490196078431, 0.7755188552446091, 1.0, 0.058823529411764705, 0.984313725490196, 1.0413635969161987, 1.0, 0.0392156862745098, 0.47058823529411764, 1.2052651084495876, 1.0, 0.0196078431372549, 0.14901960784313725, 1.5707963267948966, 1.0, 0.0, 0.01568627450980392]
- # Properties modified on anglesPWF
- anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.125, 0.5, 0.0]
- # Properties modified on anglesPWF
- anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.0, 0.5, 0.0]
- #### saving camera placements for all active views
+
+ ###
# get color transfer function/color map for 'angles'
anglesLUT = GetColorTransferFunction('angles')
anglesLUT.EnableOpacityMapping = 1
- anglesLUT.RGBPoints = [0.0, 0.12549, 0.0, 0.380392, 0.03926990816987245, 0.113725, 0.0235294, 0.45098, 0.0785398163397449, 0.105882, 0.0509804, 0.509804, 0.11780972450961717, 0.0392157, 0.0392157, 0.560784, 0.15707963267948963, 0.0313725, 0.0980392, 0.6, 0.19634954084936207, 0.0431373, 0.164706, 0.639216, 0.2356194490192345, 0.054902, 0.243137, 0.678431, 0.27488935718910695, 0.054902, 0.317647, 0.709804, 0.31415926535897926, 0.0509804, 0.396078, 0.741176, 0.35342917352885167, 0.0392157, 0.466667, 0.768627, 0.39269908169872414, 0.0313725, 0.537255, 0.788235, 0.450920647551377, 0.0313725, 0.615686, 0.811765, 0.5001541168221094, 0.0235294, 0.709804, 0.831373, 0.5470439579732639, 0.0509804, 0.8, 0.85098, 0.581428689566804, 0.0705882, 0.854902, 0.870588, 0.618940876646993, 0.262745, 0.901961, 0.862745, 0.6478560954306335, 0.423529, 0.941176, 0.87451, 0.6845860259400787, 0.572549, 0.964706, 0.835294, 0.7119383023785582, 0.658824, 0.980392, 0.843137, 0.7361646941267158, 0.764706, 0.980392, 0.866667, 0.7596088293041297, 0.827451, 0.980392, 0.886275, 0.7838273670706534, 0.913725, 0.988235, 0.937255, 0.7853981633974483, 1.0, 1.0, 1.0, 0.7869689597242432, 0.988235, 0.980392, 0.870588, 0.8111874974907669, 0.992157, 0.964706, 0.713725, 0.8322880045486029, 0.988235, 0.956863, 0.643137, 0.8729260763191136, 0.980392, 0.917647, 0.509804, 0.9127818915188803, 0.968627, 0.87451, 0.407843, 0.9495118220283256, 0.94902, 0.823529, 0.321569, 0.9817477042468103, 0.929412, 0.776471, 0.278431, 1.0210176124166828, 0.909804, 0.717647, 0.235294, 1.0602875205865552, 0.890196, 0.658824, 0.196078, 1.0995574287564276, 0.878431, 0.619608, 0.168627, 1.1388273369263, 0.870588, 0.54902, 0.156863, 1.1780972450961724, 0.85098, 0.47451, 0.145098, 1.2173671532660448, 0.831373, 0.411765, 0.133333, 1.2566370614359172, 0.811765, 0.345098, 0.113725, 1.2959069696057897, 0.788235, 0.266667, 0.0941176, 1.335176877775662, 0.741176, 0.184314, 0.0745098, 1.3744467859455345, 0.690196, 0.12549, 0.0627451, 1.413716694115407, 0.619608, 0.0627451, 0.0431373, 1.4571852684020996, 0.4, 0.00392157, 0.101961, 1.5707963267948966, 0.8313725490196079, 0.0, 0.0392156862745098]
- anglesLUT.ColorSpace = 'Lab'
+ anglesLUT.RGBPoints = [0.0, 0.0, 0.0, 1.0, 0.0, 0.17254901960784313, 0.043137254901960784, 0.9215686274509803, 0.0, 0.785929, 0.247056, 0.295477, 0.0, 0.17254901960784313, 0.043137254901960784, 0.9215686274509803, 0.266739073084488, 0.41568627450980394, 0.00392156862745098, 0.9686274509803922, 0.4198669450521392, 0.48627450980392156, 0.0, 0.9725490196078431, 0.7755188552446091, 1.0, 0.058823529411764705, 0.984313725490196, 1.0413635969161987, 1.0, 0.0392156862745098, 0.47058823529411764, 1.2052651084495876, 1.0, 0.0196078431372549, 0.14901960784313725, 1.5707963267948966, 1.0, 0.0, 0.01568627450980392]
anglesLUT.NanColor = [0.250004, 0.0, 0.0]
anglesLUT.ScalarRangeInitialized = 1.0
- anglesLUT.Annotations = ['1.5707963267948966', '$\\pi / 2$', '0.78', '$\\pi/4$', '0', '0']
+ anglesLUT.Annotations = ['1.57', '$\\pi / 2$', '0.78', '$\\pi/4$', '0', '0']
anglesLUT.IndexedColors = [1.0, 1.0, 1.0, 1.0, 0.0, 0.0, 1.0, 0.0, 0.0]
anglesLUT.IndexedOpacities = [1.0, 1.0, 1.0]
- # Apply a preset using its name. Note this may not work as expected when presets have duplicate names.
- # anglesLUT.ApplyPreset('jet', True)
-
- # Apply a preset using its name. Note this may not work as expected when presets have duplicate names.
- anglesPWF.ApplyPreset('Preset 5', True)
-
# get opacity transfer function/opacity map for 'angles'
anglesPWF = GetOpacityTransferFunction('angles')
- anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.0, 0.5, 0.0]
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.4445649345539659, 1.0, 0.5, 0.0, 0.7310624366906182, 1.0, 0.5, 0.0, 0.9879222016222671, 1.0, 0.5, 0.0, 1.254661087453241, 0.9926470518112183, 0.5, 0.0, 1.5707963267948966, 0.07352941483259201, 0.5, 0.0]
anglesPWF.ScalarRangeInitialized = 1
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.4445649345539659, 1.0, 0.5, 0.0, 0.7310624366906182, 1.0, 0.5, 0.0, 0.9879222016222671, 1.0, 0.5, 0.0, 1.254661087453241, 0.9926470518112183, 0.5, 0.0, 1.5707963267948966, 0.036764707416296005, 0.5, 0.0]
+
+ # # Properties modified on anglesPWF
+ # anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.4445649345539659, 1.0, 0.5, 0.0, 0.7310624366906182, 1.0, 0.5, 0.0, 0.9879222016222671, 1.0, 0.5, 0.0, 1.254661087453241, 0.9926470518112183, 0.5, 0.0, 1.5707963267948966, 0.03, 0.5, 0.0]
+
+ #### uncomment the following to render all views
+ #### uncomment the following to render all views
+
+#### uncomment the following to render all views
+ ## ------------------------------------------
+ # # get display properties
+ # transform1Display = GetDisplayProperties(transform1, view=renderView1)
+ #
+ # # Properties modified on transform1Display
+ # transform1Display.Opacity = 1.0
+ #
+ # # get color transfer function/color map for 'angles'
+ # anglesLUT = GetColorTransferFunction('angles')
+ # anglesLUT.RGBPoints = [0.0, 0.12549, 0.0, 0.380392, 0.03926990816987245, 0.113725, 0.0235294, 0.45098, 0.0785398163397449, 0.105882, 0.0509804, 0.509804, 0.11780972450961717, 0.0392157, 0.0392157, 0.560784, 0.15707963267948963, 0.0313725, 0.0980392, 0.6, 0.19634954084936207, 0.0431373, 0.164706, 0.639216, 0.2356194490192345, 0.054902, 0.243137, 0.678431, 0.27488935718910695, 0.054902, 0.317647, 0.709804, 0.31415926535897926, 0.0509804, 0.396078, 0.741176, 0.35342917352885167, 0.0392157, 0.466667, 0.768627, 0.39269908169872414, 0.0313725, 0.537255, 0.788235, 0.450920647551377, 0.0313725, 0.615686, 0.811765, 0.5001541168221094, 0.0235294, 0.709804, 0.831373, 0.5470439579732639, 0.0509804, 0.8, 0.85098, 0.581428689566804, 0.0705882, 0.854902, 0.870588, 0.618940876646993, 0.262745, 0.901961, 0.862745, 0.6478560954306335, 0.423529, 0.941176, 0.87451, 0.6845860259400787, 0.572549, 0.964706, 0.835294, 0.7119383023785582, 0.658824, 0.980392, 0.843137, 0.7361646941267158, 0.764706, 0.980392, 0.866667, 0.7596088293041297, 0.827451, 0.980392, 0.886275, 0.7838273670706534, 0.913725, 0.988235, 0.937255, 0.7853981633974483, 1.0, 1.0, 1.0, 0.7869689597242432, 0.988235, 0.980392, 0.870588, 0.8111874974907669, 0.992157, 0.964706, 0.713725, 0.8322880045486029, 0.988235, 0.956863, 0.643137, 0.8729260763191136, 0.980392, 0.917647, 0.509804, 0.9127818915188803, 0.968627, 0.87451, 0.407843, 0.9495118220283256, 0.94902, 0.823529, 0.321569, 0.9817477042468103, 0.929412, 0.776471, 0.278431, 1.0210176124166828, 0.909804, 0.717647, 0.235294, 1.0602875205865552, 0.890196, 0.658824, 0.196078, 1.0995574287564276, 0.878431, 0.619608, 0.168627, 1.1388273369263, 0.870588, 0.54902, 0.156863, 1.1780972450961724, 0.85098, 0.47451, 0.145098, 1.2173671532660448, 0.831373, 0.411765, 0.133333, 1.2566370614359172, 0.811765, 0.345098, 0.113725, 1.2959069696057897, 0.788235, 0.266667, 0.0941176, 1.335176877775662, 0.741176, 0.184314, 0.0745098, 1.3744467859455345, 0.690196, 0.12549, 0.0627451, 1.413716694115407, 0.619608, 0.0627451, 0.0431373, 1.4571852684020996, 0.4, 0.00392157, 0.101961, 1.5707963267948966, 0.8313725490196079, 0.0, 0.0392156862745098]
+ # anglesLUT.ColorSpace = 'Lab'
+ # anglesLUT.NanColor = [0.250004, 0.0, 0.0]
+ # anglesLUT.ScalarRangeInitialized = 1.0
+ # anglesLUT.Annotations = ['1.5707963267948966', '$\\pi / 2$', '0.78', '$\\pi/4$', '0', '0']
+ # anglesLUT.IndexedColors = [1.0, 1.0, 1.0, 1.0, 0.0, 0.0, 1.0, 0.0, 0.0]
+ # anglesLUT.IndexedOpacities = [1.0, 1.0, 1.0]
+ #
+ # # get opacity transfer function/opacity map for 'angles'
+ # anglesPWF = GetOpacityTransferFunction('angles')
+ # anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.4117647111415863, 0.5, 0.0]
+ # anglesPWF.ScalarRangeInitialized = 1
+ #
+ # # Properties modified on anglesLUT
+ # anglesLUT.EnableOpacityMapping = 1
+ #
+ # # Properties modified on anglesPWF
+ # anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.41911765933036804, 0.5, 0.0]
+ #
+ # # Properties modified on anglesPWF
+ # anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.375, 0.5, 0.0]
+ #
+ # # Properties modified on anglesPWF
+ # anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.3602941334247589, 0.5, 0.0]
+ #
+ # # Properties modified on anglesPWF
+ # anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.14705882966518402, 0.5, 0.0]
+ #
+ # # Properties modified on anglesPWF
+ # anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.125, 0.5, 0.0]
+ #
+ # # Properties modified on anglesPWF
+ # anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.0, 0.5, 0.0]
+ #
+ # #### saving camera placements for all active views
+ # # get color transfer function/color map for 'angles'
+ # anglesLUT = GetColorTransferFunction('angles')
+ # anglesLUT.EnableOpacityMapping = 1
+ # anglesLUT.RGBPoints = [0.0, 0.12549, 0.0, 0.380392, 0.03926990816987245, 0.113725, 0.0235294, 0.45098, 0.0785398163397449, 0.105882, 0.0509804, 0.509804, 0.11780972450961717, 0.0392157, 0.0392157, 0.560784, 0.15707963267948963, 0.0313725, 0.0980392, 0.6, 0.19634954084936207, 0.0431373, 0.164706, 0.639216, 0.2356194490192345, 0.054902, 0.243137, 0.678431, 0.27488935718910695, 0.054902, 0.317647, 0.709804, 0.31415926535897926, 0.0509804, 0.396078, 0.741176, 0.35342917352885167, 0.0392157, 0.466667, 0.768627, 0.39269908169872414, 0.0313725, 0.537255, 0.788235, 0.450920647551377, 0.0313725, 0.615686, 0.811765, 0.5001541168221094, 0.0235294, 0.709804, 0.831373, 0.5470439579732639, 0.0509804, 0.8, 0.85098, 0.581428689566804, 0.0705882, 0.854902, 0.870588, 0.618940876646993, 0.262745, 0.901961, 0.862745, 0.6478560954306335, 0.423529, 0.941176, 0.87451, 0.6845860259400787, 0.572549, 0.964706, 0.835294, 0.7119383023785582, 0.658824, 0.980392, 0.843137, 0.7361646941267158, 0.764706, 0.980392, 0.866667, 0.7596088293041297, 0.827451, 0.980392, 0.886275, 0.7838273670706534, 0.913725, 0.988235, 0.937255, 0.7853981633974483, 1.0, 1.0, 1.0, 0.7869689597242432, 0.988235, 0.980392, 0.870588, 0.8111874974907669, 0.992157, 0.964706, 0.713725, 0.8322880045486029, 0.988235, 0.956863, 0.643137, 0.8729260763191136, 0.980392, 0.917647, 0.509804, 0.9127818915188803, 0.968627, 0.87451, 0.407843, 0.9495118220283256, 0.94902, 0.823529, 0.321569, 0.9817477042468103, 0.929412, 0.776471, 0.278431, 1.0210176124166828, 0.909804, 0.717647, 0.235294, 1.0602875205865552, 0.890196, 0.658824, 0.196078, 1.0995574287564276, 0.878431, 0.619608, 0.168627, 1.1388273369263, 0.870588, 0.54902, 0.156863, 1.1780972450961724, 0.85098, 0.47451, 0.145098, 1.2173671532660448, 0.831373, 0.411765, 0.133333, 1.2566370614359172, 0.811765, 0.345098, 0.113725, 1.2959069696057897, 0.788235, 0.266667, 0.0941176, 1.335176877775662, 0.741176, 0.184314, 0.0745098, 1.3744467859455345, 0.690196, 0.12549, 0.0627451, 1.413716694115407, 0.619608, 0.0627451, 0.0431373, 1.4571852684020996, 0.4, 0.00392157, 0.101961, 1.5707963267948966, 0.8313725490196079, 0.0, 0.0392156862745098]
+ # anglesLUT.ColorSpace = 'Lab'
+ # anglesLUT.NanColor = [0.250004, 0.0, 0.0]
+ # anglesLUT.ScalarRangeInitialized = 1.0
+ # anglesLUT.Annotations = ['1.5707963267948966', '$\\pi / 2$', '0.78', '$\\pi/4$', '0', '0']
+ # anglesLUT.IndexedColors = [1.0, 1.0, 1.0, 1.0, 0.0, 0.0, 1.0, 0.0, 0.0]
+ # anglesLUT.IndexedOpacities = [1.0, 1.0, 1.0]
+ #
+ # # Apply a preset using its name. Note this may not work as expected when presets have duplicate names.
+ # # anglesLUT.ApplyPreset('jet', True)
+ #
+ #
+ # # get opacity transfer function/opacity map for 'angles'
+ # anglesPWF = GetOpacityTransferFunction('angles')
+ # anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.0, 0.5, 0.0]
+ # anglesPWF.ScalarRangeInitialized = 1
+
if curvature == 1:
# set scalar coloring
diff --git a/src/PhaseDiagram_PlotScriptV4.py b/src/PhaseDiagram_PlotScriptV4.py
new file mode 100644
index 0000000000000000000000000000000000000000..52df7ae0cb833ab4869ac764cfe3cd5cc4c632b0
--- /dev/null
+++ b/src/PhaseDiagram_PlotScriptV4.py
@@ -0,0 +1,1594 @@
+# To ensure correct image size when batch processing, please search
+# for and uncomment the line `# renderView*.ViewSize = [*,*]`
+
+#### import the simple module from the paraview
+from paraview.simple import *
+#### disable automatic camera reset on 'Show'
+paraview.simple._DisableFirstRenderCameraReset()
+
+#--- Run in Terminal with: 'pvbatch PhaseDiagram_PlotScript.py'
+
+
+# ----- CREATE A Phase Diagram for the following cases:
+# 1. (Hyperbolic Case) Gamma = '0'
+# 2. (Elliptic Case) Gamma = 'infinity'
+#
+# case = 1
+# case = 2
+#
+drawLine = False
+
+curvature = 1
+
+
+hide_redcolor = True
+# hide_redcolor = False
+hide_legend = True
+
+gamma = 'infinity'
+# gamma = '0'
+
+# create a new 'XML Structured Grid Reader'
+# if case == 1:
+if gamma == '0':
+ phaseDiagram3DGammainfinityvts = XMLStructuredGridReader(FileName=['/home/klaus/Desktop/DUNE/dune-microstructure/outputs/PhaseDiagram3DGamma0.vts'])
+
+
+# if case == 2:
+elif gamma == 'infinity':
+ # phaseDiagram3DGammainfinityvts = XMLStructuredGridReader(FileName=['/home/klaus/Desktop/DUNE/dune-microstructure/outputs/PhaseDiagram3DGamma0.vts'])
+ phaseDiagram3DGammainfinityvts = XMLStructuredGridReader(FileName=['/home/klaus/Desktop/DUNE/dune-microstructure/outputs/PhaseDiagram3DGammainfinity.vts'])
+
+# create a new 'XML Structured Grid Reader'
+# phaseDiagram3DGammainfinityvts = XMLStructuredGridReader(FileName=['/home/klaus/Desktop/DUNE/dune-microstructure/outputs/PhaseDiagram3DGammainfinity.vts'])
+# phaseDiagram3DGammainfinityvts = XMLStructuredGridReader(FileName=['/home/klaus/Desktop/DUNE/dune-microstructure/outputs/PhaseDiagram3DGammainfinity_100SP.vts'])
+# phaseDiagram3DGammainfinityvts = XMLStructuredGridReader(FileName=['/home/klaus/Desktop/DUNE/dune-microstructure/outputs/PhaseDiagram3DGammainfinity_300p.vts'])
+# phaseDiagram3DGammainfinityvts = XMLStructuredGridReader(FileName=['/home/klaus/Desktop/DUNE/dune-microstructure/outputs/PhaseDiagram3DGammainfinityBetaSmallerOne.vts'])
+# phaseDiagram3DGammainfinityvts = XMLStructuredGridReader(FileName=['/home/klaus/Desktop/DUNE/dune-microstructure/outputs/PhaseDiagram3DGamma0_300p.vts'])
+# phaseDiagram3DGammainfinityvts = XMLStructuredGridReader(FileName=['/home/klaus/Desktop/DUNE/dune-microstructure/outputs/PhaseDiagram3DGammainfinity_greaterOne.vts'])
+# phaseDiagram3DGammainfinityvts = XMLStructuredGridReader(FileName=['/home/klaus/Desktop/DUNE/dune-microstructure/outputs/PhaseDiagram3DGamma0_greaterOne.vts'])
+# phaseDiagram3DGammainfinityvts = XMLStructuredGridReader(FileName=['/home/klaus/Desktop/DUNE/dune-microstructure/outputs/PhaseDiagram3DGamma0.vts'])
+# phaseDiagram3DGammainfinityvts = XMLStructuredGridReader(FileName=['/home/klaus/Desktop/DUNE/dune-microstructure/outputs/PhaseDiagram3DGammainfinity_300SpMu1.vts'])
+#phaseDiagram3DGammainfinityvts = XMLStructuredGridReader(FileName=['/home/klaus/Desktop/DUNE/dune-microstructure/outputs/PhaseDiagram3DGamma0_300spmu1.vts'])
+# phaseDiagram3DGammainfinityvts = XMLStructuredGridReader(FileName=['/home/klaus/Desktop/DUNE/dune-microstructure/outputs/beforePrestrainChange/PhaseDiagram3DGammainfinity_100spmu1.vts'])
+# phaseDiagram3DGammainfinityvts = XMLStructuredGridReader(FileName=['/home/klaus/Desktop/DUNE/dune-microstructure/outputs/PhaseDiagram3DGammainfinity150P.vts'])
+
+
+phaseDiagram3DGammainfinityvts.PointArrayStatus = ['Type', 'angles', 'curvature']
+
+# get active view
+renderView1 = GetActiveViewOrCreate('RenderView')
+# uncomment following to set a specific view size
+# renderView1.ViewSize = [999, 547]
+
+## ---- Set a specific view size:
+renderView1.ViewSize = [1257, 934]
+
+# show data in view
+phaseDiagram3DGammainfinityvtsDisplay = Show(phaseDiagram3DGammainfinityvts, renderView1)
+
+# trace defaults for the display properties.
+phaseDiagram3DGammainfinityvtsDisplay.Representation = 'Outline'
+phaseDiagram3DGammainfinityvtsDisplay.ColorArrayName = ['POINTS', '']
+phaseDiagram3DGammainfinityvtsDisplay.OSPRayScaleArray = 'Type'
+phaseDiagram3DGammainfinityvtsDisplay.OSPRayScaleFunction = 'PiecewiseFunction'
+phaseDiagram3DGammainfinityvtsDisplay.SelectOrientationVectors = 'None'
+phaseDiagram3DGammainfinityvtsDisplay.ScaleFactor = 4.0
+phaseDiagram3DGammainfinityvtsDisplay.SelectScaleArray = 'Type'
+phaseDiagram3DGammainfinityvtsDisplay.GlyphType = 'Arrow'
+phaseDiagram3DGammainfinityvtsDisplay.GlyphTableIndexArray = 'Type'
+phaseDiagram3DGammainfinityvtsDisplay.GaussianRadius = 0.2
+phaseDiagram3DGammainfinityvtsDisplay.SetScaleArray = ['POINTS', 'Type']
+phaseDiagram3DGammainfinityvtsDisplay.ScaleTransferFunction = 'PiecewiseFunction'
+phaseDiagram3DGammainfinityvtsDisplay.OpacityArray = ['POINTS', 'Type']
+phaseDiagram3DGammainfinityvtsDisplay.OpacityTransferFunction = 'PiecewiseFunction'
+phaseDiagram3DGammainfinityvtsDisplay.DataAxesGrid = 'GridAxesRepresentation'
+phaseDiagram3DGammainfinityvtsDisplay.PolarAxes = 'PolarAxesRepresentation'
+phaseDiagram3DGammainfinityvtsDisplay.ScalarOpacityUnitDistance = 1.1546332790816523
+
+# init the 'PiecewiseFunction' selected for 'OSPRayScaleFunction'
+phaseDiagram3DGammainfinityvtsDisplay.OSPRayScaleFunction.Points = [1.0, 0.8602941036224365, 0.5, 0.0, 1.213836476688135, 0.625, 0.5, 0.0, 1.3616352081298828, 0.6691176295280457, 0.5, 0.0, 1.6666333299996667, 0.8676470518112183, 0.5, 0.0, 1.7358490228652954, 0.6911764740943909, 0.5, 0.0, 2.0, 0.8014705777168274, 0.5, 0.0]
+
+# init the 'PiecewiseFunction' selected for 'ScaleTransferFunction'
+phaseDiagram3DGammainfinityvtsDisplay.ScaleTransferFunction.Points = [1.0, 0.8602941036224365, 0.5, 0.0, 1.4276729533762702, 0.625, 0.5, 0.0, 1.7232704162597656, 0.6691176295280457, 0.5, 0.0, 2.3332666599993335, 0.8676470518112183, 0.5, 0.0, 2.471698045730591, 0.6911764740943909, 0.5, 0.0, 3.0, 0.8014705777168274, 0.5, 0.0]
+
+# init the 'PiecewiseFunction' selected for 'OpacityTransferFunction'
+phaseDiagram3DGammainfinityvtsDisplay.OpacityTransferFunction.Points = [1.0, 0.8602941036224365, 0.5, 0.0, 1.4276729533762702, 0.625, 0.5, 0.0, 1.7232704162597656, 0.6691176295280457, 0.5, 0.0, 2.3332666599993335, 0.8676470518112183, 0.5, 0.0, 2.471698045730591, 0.6911764740943909, 0.5, 0.0, 3.0, 0.8014705777168274, 0.5, 0.0]
+
+# reset view to fit data
+renderView1.ResetCamera()
+
+# update the view to ensure updated data information
+renderView1.Update()
+
+# create a new 'Transform'
+transform1 = Transform(Input=phaseDiagram3DGammainfinityvts)
+transform1.Transform = 'Transform'
+
+# Properties modified on transform1.Transform
+transform1.Transform.Scale = [0.025, 0.025, 1.0]
+
+# Properties modified on transform1.Transform
+# transform1.Transform.Scale = [0.025, 1.0, 1.0]
+
+# show data in view
+transform1Display = Show(transform1, renderView1)
+
+# trace defaults for the display properties.
+transform1Display.Representation = 'Outline'
+transform1Display.ColorArrayName = ['POINTS', '']
+transform1Display.OSPRayScaleArray = 'Type'
+transform1Display.OSPRayScaleFunction = 'PiecewiseFunction'
+transform1Display.SelectOrientationVectors = 'None'
+transform1Display.ScaleFactor = 0.1
+transform1Display.SelectScaleArray = 'Type'
+transform1Display.GlyphType = 'Arrow'
+transform1Display.GlyphTableIndexArray = 'Type'
+transform1Display.GaussianRadius = 0.005
+transform1Display.SetScaleArray = ['POINTS', 'Type']
+transform1Display.ScaleTransferFunction = 'PiecewiseFunction'
+transform1Display.OpacityArray = ['POINTS', 'Type']
+transform1Display.OpacityTransferFunction = 'PiecewiseFunction'
+transform1Display.DataAxesGrid = 'GridAxesRepresentation'
+transform1Display.PolarAxes = 'PolarAxesRepresentation'
+transform1Display.ScalarOpacityUnitDistance = 0.035113904022862234
+
+# init the 'PiecewiseFunction' selected for 'OSPRayScaleFunction'
+transform1Display.OSPRayScaleFunction.Points = [1.0, 0.8602941036224365, 0.5, 0.0, 1.213836476688135, 0.625, 0.5, 0.0, 1.3616352081298828, 0.6691176295280457, 0.5, 0.0, 1.6666333299996667, 0.8676470518112183, 0.5, 0.0, 1.7358490228652954, 0.6911764740943909, 0.5, 0.0, 2.0, 0.8014705777168274, 0.5, 0.0]
+# init the 'PiecewiseFunction' selected for 'ScaleTransferFunction'
+transform1Display.ScaleTransferFunction.Points = [1.0, 0.8602941036224365, 0.5, 0.0, 1.4276729533762702, 0.625, 0.5, 0.0, 1.7232704162597656, 0.6691176295280457, 0.5, 0.0, 2.3332666599993335, 0.8676470518112183, 0.5, 0.0, 2.471698045730591, 0.6911764740943909, 0.5, 0.0, 3.0, 0.8014705777168274, 0.5, 0.0]
+# init the 'PiecewiseFunction' selected for 'OpacityTransferFunction'
+transform1Display.OpacityTransferFunction.Points = [1.0, 0.8602941036224365, 0.5, 0.0, 1.4276729533762702, 0.625, 0.5, 0.0, 1.7232704162597656, 0.6691176295280457, 0.5, 0.0, 2.3332666599993335, 0.8676470518112183, 0.5, 0.0, 2.471698045730591, 0.6911764740943909, 0.5, 0.0, 3.0, 0.8014705777168274, 0.5, 0.0]
+
+# hide data in view
+Hide(phaseDiagram3DGammainfinityvts, renderView1)
+
+# update the view to ensure updated data information
+renderView1.Update()
+#
+# reset view to fit data
+renderView1.ResetCamera()
+
+# -------------------------------------------------------------
+
+# toggle 3D widget visibility (only when running from the GUI)
+Hide3DWidgets(proxy=transform1.Transform)
+
+# set scalar coloring
+ColorBy(transform1Display, ('POINTS', 'angles'))
+
+# rescale color and/or opacity maps used to include current data range
+transform1Display.RescaleTransferFunctionToDataRange(True, False)
+
+# show color bar/color legend
+transform1Display.SetScalarBarVisibility(renderView1, True)
+
+# get color transfer function/color map for 'angles'
+anglesLUT = GetColorTransferFunction('angles')
+
+# get opacity transfer function/opacity map for 'angles'
+anglesPWF = GetOpacityTransferFunction('angles')
+
+# --- change representation type
+transform1Display.SetRepresentationType('Point Gaussian')
+
+# Properties modified on transform1Display
+transform1Display.ShaderPreset = 'Plain circle'
+
+# --- Properties modified on transform1Display
+transform1Display.GaussianRadius = 0.0075
+# Properties modified on transform1Display
+
+##--- SET OPACITY
+# transform1Display.Opacity = 0.07
+transform1Display.Opacity = 0.03 #overall Opacity
+# transform1Display.Opacity = 0.15 #overall Opacity
+
+# -------------- CHANGE COLORMAP ------------------
+# Apply a preset using its name. Note this may not work as expected when presets have duplicate names.
+
+#anglesLUT.ApplyPreset('Cool to Warm', True)
+anglesLUT.ApplyPreset('Jet', True)
+
+
+
+
+
+## (Optional?) Adjust ColorMap:
+# get opacity transfer function/opacity map for 'angles'
+anglesPWF = GetOpacityTransferFunction('angles') #
+# get color transfer function
+colorMap = GetColorTransferFunction('angles')
+
+# get color transfer function/color map for 'angles'
+anglesLUT = GetColorTransferFunction('angles')
+anglesLUT.AutomaticRescaleRangeMode = "Grow and update on 'Apply'"
+anglesLUT.InterpretValuesAsCategories = 0
+anglesLUT.AnnotationsInitialized = 0
+anglesLUT.ShowCategoricalColorsinDataRangeOnly = 0
+anglesLUT.RescaleOnVisibilityChange = 0
+anglesLUT.EnableOpacityMapping = 1
+anglesLUT.RGBPoints = [0.0, 0.23137254902, 0.298039215686, 0.752941176471, 0.9632241725921631, 0.865, 0.865, 0.865, 1.5707963267948966, 0.705882352941, 0.0156862745098, 0.149019607843]
+anglesLUT.UseLogScale = 0
+anglesLUT.ColorSpace = 'Diverging'
+anglesLUT.UseBelowRangeColor = 0
+anglesLUT.BelowRangeColor = [0.0, 0.0, 0.0]
+anglesLUT.UseAboveRangeColor = 0
+anglesLUT.AboveRangeColor = [0.5, 0.5, 0.5]
+anglesLUT.NanColor = [1.0, 1.0, 0.0]
+anglesLUT.NanOpacity = 1.0
+anglesLUT.Discretize = 1
+anglesLUT.NumberOfTableValues = 256
+anglesLUT.ScalarRangeInitialized = 1.0
+anglesLUT.HSVWrap = 0
+anglesLUT.VectorComponent = 0
+anglesLUT.VectorMode = 'Magnitude'
+anglesLUT.AllowDuplicateScalars = 1
+anglesLUT.Annotations = []
+anglesLUT.ActiveAnnotatedValues = []
+anglesLUT.IndexedColors = []
+anglesLUT.IndexedOpacities = []
+
+# get opacity transfer function/opacity map for 'angles'
+anglesPWF = GetOpacityTransferFunction('angles')
+# anglesPWF.Points = [0.0, 0.05882352963089943, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+anglesPWF.AllowDuplicateScalars = 1
+anglesPWF.UseLogScale = 0
+anglesPWF.ScalarRangeInitialized = 1
+
+# Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 0.3014705777168274, 0.5, 0.0, 0.33589355211648514, 0.625, 0.5, 0.0, 0.5680552565701278, 0.6691176295280457, 0.5, 0.0, 1.0471451860825267, 0.8676470518112183, 0.5, 0.0, 1.15586894219242, 0.6911764740943909, 0.5, 0.0, 1.5707963267948966, 0.8014705777168274, 0.5, 0.0]
+
+
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 0.037, 0.5, 1.0, 0.33589355211648514, 0.625, 0.5, 0.0, 0.5680552565701278, 0.6691176295280457, 0.5, 0.0, 1.0471451860825267, 0.8676470518112183, 0.5, 0.0, 1.15586894219242, 0.6911764740943909, 0.5, 0.0, 1.5707963267948966, 0.8014705777168274, 0.5, 0.0]
+# Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 0.036764707416296005, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+anglesPWF.Points = [0.1, 0.136764707416296005, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+# rescale color and/or opacity maps used to exactly fit the current data range
+transform1Display.RescaleTransferFunctionToDataRange(False, True)
+# # Properties modified on anglesPWF
+# # anglesPWF.Points = [0.0, 0.036764707416296005, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0570768117917348, 1.0, 0.5, 0.0, 1.1558689421924027, 0.9852941036224365, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.7705793380737305, 0.9779411554336548, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+#
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.7656397223472595, 0.9926470518112183, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+#
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+#
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 0.9779411554336548, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+#
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 0.9411764740943909, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+#
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 0.904411792755127, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+#
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 0.7573529481887817, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+#
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 0.7426470518112183, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+#
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 0.6838235259056091, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+#
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 0.6764705777168274, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+#
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 0.5955882668495178, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+#
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 0.5735294222831726, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+#
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 0.43382352590560913, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+#
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 0.4264705777168274, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+#
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 0.3897058963775635, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+#
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 0.36764705181121826, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+#
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 0.29411765933036804, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+#
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 0.2867647111415863, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+#
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 0.2647058963775635, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+#
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 0.25, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+#
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 0.2132352888584137, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+#
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 0.1985294073820114, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+#
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 0.16911764442920685, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+#
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 0.1617647111415863, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+#
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 0.13235294818878174, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+#
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 0.11029411852359772, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+#
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 0.10294117778539658, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+#
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 0.09558823704719543, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+#
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 0.06617647409439087, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+#
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 0.05882352963089943, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+#
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 0.05147058889269829, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+#
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 0.036764707416296005, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+#
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 0.029411764815449715, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+#
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 0.06617647409439087, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+#
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 0.07352941483259201, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+#
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 0.05147058889269829, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+#
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 0.04411764815449715, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+#
+# # Properties modified on anglesPWF
+# anglesPWF.Points = [0.0, 0.036764707416296005, 0.5, 0.0, 0.7607001066207886, 1.0, 0.5, 0.0, 0.8693715333938599, 1.0, 0.5, 0.0, 1.0175598859786987, 1.0, 0.5, 0.0, 1.12623131275177, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+
+
+# Properties modified on anglesLUT
+anglesLUT.EnableOpacityMapping = 0
+anglesLUT.EnableOpacityMapping = 1
+
+
+
+## ---- AXES GRID PROPERTIES -----
+# Properties modified on renderView1.AxesGrid
+renderView1.AxesGrid.Visibility = 1
+
+# Properties modified on renderView1.AxesGrid
+renderView1.AxesGrid.XTitle = ' $\\theta_\\rho$ '
+renderView1.AxesGrid.YTitle = ' $\\theta_\\mu$ '
+renderView1.AxesGrid.ZTitle = ' $\\theta$ '
+
+# renderView1.AxesGrid.XTitleFontSize = 45 #24
+# renderView1.AxesGrid.YTitleFontSize = 45
+# renderView1.AxesGrid.ZTitleFontSize = 45
+# renderView1.AxesGrid.XLabelFontSize = 30 #default:12
+# renderView1.AxesGrid.YLabelFontSize = 30
+# renderView1.AxesGrid.ZLabelFontSize = 30
+
+renderView1.AxesGrid.XTitleFontSize = 65 #24
+renderView1.AxesGrid.YTitleFontSize = 65
+renderView1.AxesGrid.ZTitleFontSize = 65
+renderView1.AxesGrid.XLabelFontSize = 45 #default:12
+renderView1.AxesGrid.YLabelFontSize = 45
+renderView1.AxesGrid.ZLabelFontSize = 45
+
+# ---- Switch of/on OrientationAXES:
+# renderView1.OrientationAxesVisibility = 1
+renderView1.OrientationAxesVisibility = 0
+# rv = GetRenderView()
+# renderView1.OrientationAxesLabelColor = [0.5, 0.5, 0.5]
+# Render()
+
+# ---- Switch Grid On/Off:
+renderView1.AxesGrid.ShowGrid = 1
+
+# # reset view to fit data
+# renderView1.ResetCamera()
+
+
+## Properties modified on renderView1.AxesGrid
+## -- COLOR/Font-Size OF AXES-TITLE:
+## -- Green:
+# renderView1.AxesGrid.XTitleColor = [0.5411764705882353, 0.8862745098039215, 0.20392156862745098]
+# renderView1.AxesGrid.YTitleColor = [0.5411764705882353, 0.8862745098039215, 0.20392156862745098]
+# renderView1.AxesGrid.ZTitleColor = [0.5411764705882353, 0.8862745098039215, 0.20392156862745098]
+## -- White:
+# renderView1.AxesGrid.XTitleColor = [1.0, 1.0, 1.0]
+# renderView1.AxesGrid.YTitleColor = [1.0, 1.0, 1.0]
+# renderView1.AxesGrid.ZTitleColor = [1.0, 1.0, 1.0]
+
+
+
+# Properties modified on renderView1.AxesGrid
+# --- Change FontSize of Values on Axis:
+
+
+# # --- Change Color of Values on Axis:
+## -- Green:
+# # renderView1.AxesGrid.XLabelColor = [0.5411764705882353, 0.8862745098039215, 0.20392156862745098]
+# # renderView1.AxesGrid.YLabelColor = [0.5411764705882353, 0.8862745098039215, 0.20392156862745098]
+# # renderView1.AxesGrid.ZLabelColor = [0.5411764705882353, 0.8862745098039215, 0.20392156862745098]
+## -- White:
+renderView1.AxesGrid.XLabelColor = [1.0, 1.0, 1.0]
+renderView1.AxesGrid.YLabelColor = [1.0, 1.0, 1.0]
+renderView1.AxesGrid.ZLabelColor = [1.0, 1.0, 1.0]
+
+## --- Render Axes only on certain Facets:
+renderView1.AxesGrid.FacesToRender = 7
+renderView1.AxesGrid.ShowEdges = 0
+renderView1.AxesGrid.AxesToLabel = 24
+
+
+## ----------- Scale Data on Axes:
+renderView1.AxesGrid.DataScale = [0.025, 0.025, 1.0]
+#
+# # Properties modified on renderView1.AxesGrid
+## ---------- Set Custom Axis-Labels:
+renderView1.AxesGrid.XAxisUseCustomLabels = 1
+renderView1.AxesGrid.ZAxisUseCustomLabels = 1
+renderView1.AxesGrid.YAxisUseCustomLabels = 1
+renderView1.AxesGrid.XAxisLabels = [-20, -15.0, -10.0, -5.0, 0.0, 5.0, 10.0, 15.0, 20.0]
+# renderView1.AxesGrid.YAxisLabels = [0 , 10.0, 20.0, 30.0, 40.0]
+# renderView1.AxesGrid.YAxisLabels = [1 ,5, 10.0,15, 20.0,25, 30.0,35, 40.0]
+renderView1.AxesGrid.YAxisLabels = [1 , 10, 20, 30, 40]
+# renderView1.AxesGrid.YAxisLabels = [0 ,5.0, 10.0, 15.0, 20.0, 25.0, 30.0,35.0, 40.0]
+renderView1.AxesGrid.ZAxisLabels = [ 0.1, 0.2, 0.3, 0.4, 0.5, 0.6, 0.7, 0.8, 0.9, 1.0]
+
+
+## ---- SET Center-Axis visible:
+renderView1.CenterAxesVisibility = 0
+
+# ----------------- CAMERA POSITION -----------------
+# current camera placement for renderView1
+# renderView1.CameraPosition = [0.9924119707463583, 3.796427396663517, 1.5103327925582364]
+# renderView1.CameraFocalPoint = [0.0, 0.5002500000000001, 0.5]
+# renderView1.CameraViewUp = [-0.03762445763524004, -0.2824789551065148, 0.9585353619505051]
+# renderView1.CameraParallelScale = 0.93323050610355
+
+renderView1.CameraPosition = [1.320702817430001, 3.4031687433379654, 1.5124027164700495]
+renderView1.CameraFocalPoint = [5.999081648913413e-18, 0.5002500000000002, 0.4999999999999999]
+renderView1.CameraViewUp = [-0.09506057625109621, -0.2889757851908078, 0.9526051030811066]
+renderView1.CameraParallelScale = 0.8660254037844386
+renderView1.EyeAngle = 0.0
+
+renderView1.Update()
+
+## uncomment the following to render all views # TODO ?
+# RenderAllViews()
+
+# # get active view
+# # renderView1 = GetActiveViewOrCreate('RenderView')
+
+
+
+
+
+
+
+# ----------------- DRAW LINE -----------------
+if drawLine:
+ # create a new 'Line'
+ line1 = Line()
+
+ # show data in view
+ line1Display = Show(line1, renderView1)
+ # set active source
+ SetActiveSource(line1)
+
+ # Properties modified on line1
+ line1.Point1 = [0.25, 0.25, 0.0]
+ line1.Point2 = [0.25, 0.25, 1.0]
+
+ # Properties modified on line1Display
+ # line1Display.LineWidth = 2.0
+ line1Display.LineWidth = 4.0
+
+ # change solid color
+ line1Display.AmbientColor = [1.0, 1.0, 0.4980392156862745]
+ line1Display.DiffuseColor = [1.0, 1.0, 0.4980392156862745]
+
+ # toggle 3D widget visibility (only when running from the GUI)
+ Show3DWidgets(proxy=line1)
+
+ # update the view to ensure updated data information
+ renderView1.Update()
+
+ # # reset view to fit data
+ # renderView1.ResetCamera()
+
+
+# ----------------- DRAW Plane -----------------
+# # create a new 'Plane'
+# plane2 = Plane()
+# plane2.Origin = [0.0, 0.0, 0.0]
+# plane2.Point1 = [0.0, 0.0, 1.0]
+# plane2.Point2 = [0.0, 1.0, 0.0]
+# plane2.XResolution = 1
+# plane2.YResolution = 1
+#
+# # show data in view
+# plane2Display = Show(plane2, renderView1)
+# ----------------- LEGEND -----------------
+# get color legend/bar for anglesLUT in view renderView1
+anglesLUTColorBar = GetScalarBar(anglesLUT, renderView1)
+
+# Properties modified on anglesLUTColorBar
+anglesLUTColorBar.WindowLocation = 'LowerRightCorner'
+anglesLUTColorBar.HorizontalTitle = 1
+anglesLUTColorBar.Title = 'angle $\\alpha$' #'angle $\\angle$'
+anglesLUTColorBar.TextPosition = 'Ticks left/bottom, annotations right/top'
+anglesLUTColorBar.TitleJustification = 'Left'
+# anglesLUTColorBar.TitleJustification = 'Centered'
+
+# show color bar/color legend
+# transform1Display.SetScalarBarVisibility(renderView1, True)
+
+# # # Properties modified on anglesLUTColorBar
+anglesLUTColorBar.AutomaticAnnotations = 0
+anglesLUTColorBar.AddRangeLabels = 0
+anglesLUTColorBar.DrawTickMarks = 0
+anglesLUTColorBar.DrawTickLabels = 0
+anglesLUTColorBar.TitleFontSize = 24
+anglesLUTColorBar.LabelFontSize = 20
+# anglesLUTColorBar.AddRangeAnnotations = 1
+
+## -- Add Annotations :
+anglesLUT.Annotations = ['1.57', '$\\pi / 2$', '0.78', '$\\pi/4$', '0', '0']
+anglesLUT.IndexedColors = [1.0, 1.0, 1.0, 1.0, 0.0, 0.0, 1.0, 0.0, 0.0, 1.0, 0.0, 0.0]
+anglesLUT.IndexedOpacities = [1.0, 1.0, 1.0, 1.0]
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+# # get color legend/bar for anglesLUT in view renderView1
+# anglesLUTColorBar = GetScalarBar(anglesLUT, renderView1)
+
+#
+# if case == 1:
+# ## In Hyperbolic Case only two angles occur...
+# # Use discrete Color map:
+# # # Properties modified on anglesLUT
+# # anglesLUT.InterpretValuesAsCategories = 1
+# # anglesLUT.AnnotationsInitialized = 1
+# #
+# #
+# #
+# # # Properties modified on anglesLUT
+# # anglesLUT.Annotations = ['1.5707963267948966', '$\\pi / 2$', '0.78', '$\\pi/4$', '0', '0']
+# # # Properties modified on anglesLUT
+# # anglesLUT.IndexedColors = [1.0, 0.10196078431372549, 0.023529411764705882, 0.03137254901960784, 0.03137254901960784, 1.0]
+# # # Properties modified on anglesLUT
+# # anglesLUT.IndexedOpacities = [1.0, 0.015]
+# # # get active view
+# # renderView1 = GetActiveViewOrCreate('RenderView')
+# # # uncomment following to set a specific view size
+# # # renderView1.ViewSize = [997, 905]
+# #
+# # # get display properties
+# transform1Display = GetDisplayProperties(transform1, view=renderView1)
+# print('Hyperbolic Case (case1)')
+#
+# # get color transfer function/color map for 'angles'
+# anglesLUT = GetColorTransferFunction('angles')
+# anglesLUT.AutomaticRescaleRangeMode = "Grow and update on 'Apply'"
+# anglesLUT.InterpretValuesAsCategories = 1
+# anglesLUT.AnnotationsInitialized = 1
+# anglesLUT.ShowCategoricalColorsinDataRangeOnly = 0
+# anglesLUT.RescaleOnVisibilityChange = 0
+# anglesLUT.EnableOpacityMapping = 1
+# anglesLUT.RGBPoints = [0.0, 0.23137254902, 0.298039215686, 0.752941176471, 0.9632241725921631, 0.865, 0.865, 0.865, 1.5707963267948966, 0.705882352941, 0.0156862745098, 0.149019607843]
+# anglesLUT.UseLogScale = 0
+# anglesLUT.ColorSpace = 'Diverging'
+# anglesLUT.UseBelowRangeColor = 0
+# anglesLUT.BelowRangeColor = [0.0, 0.0, 0.0]
+# anglesLUT.UseAboveRangeColor = 0
+# anglesLUT.AboveRangeColor = [0.5, 0.5, 0.5]
+# anglesLUT.NanColor = [1.0, 1.0, 0.0]
+# anglesLUT.NanOpacity = 1.0
+# anglesLUT.Discretize = 1
+# anglesLUT.NumberOfTableValues = 256
+# anglesLUT.ScalarRangeInitialized = 1.0
+# anglesLUT.HSVWrap = 0
+# anglesLUT.VectorComponent = 0
+# anglesLUT.VectorMode = 'Magnitude'
+# anglesLUT.AllowDuplicateScalars = 1
+# anglesLUT.Annotations = ['1.5707963267948966', '$\\pi / 2$', '0.78', '$\\pi/4$', '0', '0']
+# anglesLUT.ActiveAnnotatedValues = []
+# anglesLUT.IndexedColors = [1.0, 0.10196078431372549, 0.023529411764705882, 0.03137254901960784, 0.03137254901960784, 1.0]
+# anglesLUT.IndexedOpacities = [1.0, 0.015]
+#
+# # Properties modified on anglesLUT
+# anglesLUT.Annotations = ['1.5707963267948966', '$\\pi / 2$', '0', '0']
+# anglesLUT.IndexedColors = [1.0, 0.10196078431372549, 0.023529411764705882, 1.0, 0.10196078431372549, 0.023529411764705882]
+# anglesLUT.IndexedOpacities = [1.0, -1.0]
+#
+# # get opacity transfer function/opacity map for 'angles'
+# anglesPWF = GetOpacityTransferFunction('angles')
+# anglesPWF.Points = [0.0, 0.136764707416296, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+# anglesPWF.AllowDuplicateScalars = 1
+# anglesPWF.UseLogScale = 0
+# anglesPWF.ScalarRangeInitialized = 1
+#
+# # Properties modified on anglesLUT
+# anglesLUT.IndexedColors = [1.0, 0.10196078431372549, 0.023529411764705882, 0.07450980392156863, 0.043137254901960784, 1.0]
+#
+# # Properties modified on anglesLUT
+# anglesLUT.IndexedOpacities = [1.0, 0.01]
+#
+# # get active source.
+# transform1 = GetActiveSource()
+#
+# # get active view
+# renderView1 = GetActiveViewOrCreate('RenderView')
+# # uncomment following to set a specific view size
+# # renderView1.ViewSize = [1257, 934]
+#
+# # get display properties
+# transform1Display = GetDisplayProperties(transform1, view=renderView1)
+#
+# # Properties modified on transform1Display
+# transform1Display.Opacity = 0.2
+#
+# transform1Display.GaussianRadius = 0.02
+#
+# # Properties modified on anglesLUT
+# anglesLUT.IndexedOpacities = [1.0, 0.017]
+# elseif case == 2:
+#
+
+
+#
+if gamma == '0':
+ # get color transfer function/color map for 'angles'
+ anglesLUT = GetColorTransferFunction('angles')
+ anglesLUT.AutomaticRescaleRangeMode = "Grow and update on 'Apply'"
+ anglesLUT.InterpretValuesAsCategories = 0
+ anglesLUT.AnnotationsInitialized = 0
+ anglesLUT.ShowCategoricalColorsinDataRangeOnly = 0
+ anglesLUT.RescaleOnVisibilityChange = 0
+ anglesLUT.EnableOpacityMapping = 1
+ anglesLUT.RGBPoints = [0.0, 0.23137254902, 0.298039215686, 0.752941176471, 0.9632241725921631, 0.865, 0.865, 0.865, 1.5707963267948966, 0.705882352941, 0.0156862745098, 0.149019607843]
+ anglesLUT.UseLogScale = 0
+ anglesLUT.ColorSpace = 'Diverging'
+ anglesLUT.UseBelowRangeColor = 0
+ anglesLUT.BelowRangeColor = [0.0, 0.0, 0.0]
+ anglesLUT.UseAboveRangeColor = 0
+ anglesLUT.AboveRangeColor = [0.5, 0.5, 0.5]
+ anglesLUT.NanColor = [1.0, 1.0, 0.0]
+ anglesLUT.NanOpacity = 1.0
+ anglesLUT.Discretize = 1
+ anglesLUT.NumberOfTableValues = 256
+ anglesLUT.ScalarRangeInitialized = 1.0
+ anglesLUT.HSVWrap = 0
+ anglesLUT.VectorComponent = 0
+ anglesLUT.VectorMode = 'Magnitude'
+ anglesLUT.AllowDuplicateScalars = 1
+ anglesLUT.Annotations = ['1.57', '$\\pi / 2$', '0.78', '$\\pi/4$', '0', '0']
+ anglesLUT.ActiveAnnotatedValues = []
+ anglesLUT.IndexedColors = [1.0, 1.0, 1.0, 1.0, 0.0, 0.0, 1.0, 0.0, 0.0, 1.0, 0.0, 0.0]
+ anglesLUT.IndexedOpacities = [1.0, 1.0, 1.0, 1.0]
+
+ # get opacity transfer function/opacity map for 'angles'
+ anglesPWF = GetOpacityTransferFunction('angles')
+ anglesPWF.Points = [0.0, 0.136764707416296, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+ anglesPWF.AllowDuplicateScalars = 1
+ anglesPWF.UseLogScale = 0
+ anglesPWF.ScalarRangeInitialized = 1
+
+ # Properties modified on anglesLUT
+ anglesLUT.InterpretValuesAsCategories = 1
+ anglesLUT.AnnotationsInitialized = 1
+
+ # Properties modified on anglesLUT
+ anglesLUT.Annotations = ['1.57', '$\\pi / 2$', '0.78', '$\\pi/4$', '0', '0', '1.5707963267948966', '1.5708']
+
+ # Properties modified on anglesLUT
+ anglesLUT.Annotations = ['1.57', '$\\pi / 2$', '0.78', '$\\pi/4$', '0', '0']
+ anglesLUT.IndexedColors = [1.0, 1.0, 1.0, 1.0, 0.0, 0.0, 1.0, 0.0, 0.0]
+ anglesLUT.IndexedOpacities = [1.0, 1.0, 1.0]
+
+ # Properties modified on anglesLUT
+ anglesLUT.Annotations = ['1.57', '$\\pi / 2$', '0', '0']
+ anglesLUT.IndexedColors = [1.0, 1.0, 1.0, 1.0, 0.0, 0.0]
+ anglesLUT.IndexedOpacities = [1.0, 1.0]
+
+ # Properties modified on anglesLUT
+ anglesLUT.Annotations = ['1.5707963267948966', '$\\pi / 2$', '0', '0']
+
+ # Properties modified on anglesLUT
+ anglesLUT.IndexedColors = [1.0, 0.0, 0.0, 1.0, 0.0, 0.0]
+
+ # Properties modified on anglesLUT
+ anglesLUT.IndexedColors = [1.0, 0.0, 0.0, 0.23137254901960785, 0.2980392156862745, 0.7529411764705882]
+ # Properties modified on anglesLUT
+ anglesLUT.IndexedColors = [0.7058823529411765, 0.01568627450980392, 0.14901960784313725, 0.23137254901960785, 0.2980392156862745, 0.7529411764705882]
+
+ # Properties modified on anglesLUT
+ anglesLUT.IndexedOpacities = [1.0, 0.02]
+
+ # Properties modified on anglesLUT
+ anglesLUT.IndexedOpacities = [1.0, 0.05]
+
+ # Properties modified on anglesLUT
+ anglesLUT.IndexedOpacities = [1.0, 0.1]
+
+
+
+ # NEW:
+ anglesLUT.IndexedOpacities = [0.1, 1.0]
+
+ # Properties modified on anglesLUT
+ anglesLUT.IndexedColors = [0.8313725490196079, 0.0196078431372549, 0.0392156862745098, 0.12549019607843137, 0.0, 0.3803921568627451, 0.7058823529411765, 0.01568627450980392, 0.14901960784313725, 0.23137254901960785, 0.2980392156862745, 0.7529411764705882]
+
+ # get opacity transfer function/opacity map for 'angles'
+ anglesPWF = GetOpacityTransferFunction('angles')
+ anglesPWF.Points = [0.0, 0.136764707416296, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+ anglesPWF.ScalarRangeInitialized = 1
+
+ # Properties modified on anglesLUT
+ anglesLUT.IndexedColors = [0.8313725490196079, 0.0, 0.0392156862745098, 0.12549019607843137, 0.0, 0.3803921568627451, 0.7058823529411765, 0.01568627450980392, 0.14901960784313725, 0.23137254901960785, 0.2980392156862745, 0.7529411764705882]
+
+
+ # if hide_redcolor:
+ #
+ # # get active source.
+ # transform1 = GetActiveSource()
+ #
+ # # get active view
+ # renderView1 = GetActiveViewOrCreate('RenderView')
+ # # uncomment following to set a specific view size
+ # # renderView1.ViewSize = [1257, 934]
+ #
+ # # get display properties
+ # transform1Display = GetDisplayProperties(transform1, view=renderView1)
+ #
+ # # Properties modified on transform1Display
+ # transform1Display.Opacity = 1.0
+ #
+ # # get color transfer function/color map for 'angles'
+ # anglesLUT = GetColorTransferFunction('angles')
+ # anglesLUT.InterpretValuesAsCategories = 1
+ # anglesLUT.AnnotationsInitialized = 1
+ # anglesLUT.EnableOpacityMapping = 1
+ # anglesLUT.RGBPoints = [0.0, 0.23137254902, 0.298039215686, 0.752941176471, 0.9632241725921631, 0.865, 0.865, 0.865, 1.5707963267948966, 0.705882352941, 0.0156862745098, 0.149019607843]
+ # anglesLUT.ScalarRangeInitialized = 1.0
+ # anglesLUT.Annotations = ['1.5707963267948966', '$\\pi / 2$', '0', '0', '0', '0', '1.5707963267948966', '1.5708']
+ # anglesLUT.ActiveAnnotatedValues = ['0']
+ # anglesLUT.IndexedColors = [0.8313725490196079, 0.0, 0.0392156862745098, 0.12549019607843137, 0.0, 0.3803921568627451, 0.7058823529411765, 0.01568627450980392, 0.14901960784313725, 0.23137254901960785, 0.2980392156862745, 0.7529411764705882]
+ # anglesLUT.IndexedOpacities = [0.1, 1.0, 1.0, 1.0]
+ #
+ # # get opacity transfer function/opacity map for 'angles'
+ # anglesPWF = GetOpacityTransferFunction('angles')
+ # anglesPWF.Points = [0.0, 0.136764707416296, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+ # anglesPWF.ScalarRangeInitialized = 1
+ #
+ # # Properties modified on anglesLUT
+ # anglesLUT.IndexedOpacities = [0.0, 1.0, 1.0, 1.0]
+
+
+ # # ----------------- LEGEND -----------------
+ # get color transfer function/color map for 'angles'
+ anglesLUT = GetColorTransferFunction('angles')
+ anglesLUT.InterpretValuesAsCategories = 1
+ anglesLUT.AnnotationsInitialized = 1
+ anglesLUT.EnableOpacityMapping = 1
+ anglesLUT.RGBPoints = [0.0, 0.23137254902, 0.298039215686, 0.752941176471, 0.9632241725921631, 0.865, 0.865, 0.865, 1.5707963267948966, 0.705882352941, 0.0156862745098, 0.149019607843]
+ anglesLUT.ScalarRangeInitialized = 1.0
+ anglesLUT.Annotations = ['1.5707963267948966', '$\\pi / 2$', '0', '0', '0', '0', '1.5707963267948966', '1.5708']
+ anglesLUT.ActiveAnnotatedValues = ['0']
+ anglesLUT.IndexedColors = [0.8313725490196079, 0.0, 0.0392156862745098, 0.12549019607843137, 0.0, 0.3803921568627451, 0.7058823529411765, 0.01568627450980392, 0.14901960784313725, 0.23137254901960785, 0.2980392156862745, 0.7529411764705882]
+ anglesLUT.IndexedOpacities = [0.1, 1.0, 1.0, 1.0]
+
+ # Properties modified on anglesLUT
+ anglesLUT.Annotations = ['1.5707963267948966', '$\\pi / 2$', '0', '0', '0', '0']
+ anglesLUT.IndexedColors = [0.8313725490196079, 0.0, 0.0392156862745098, 0.12549019607843137, 0.0, 0.3803921568627451, 0.7058823529411765, 0.01568627450980392, 0.14901960784313725]
+ anglesLUT.IndexedOpacities = [0.1, 1.0, 1.0]
+
+ # get opacity transfer function/opacity map for 'angles'
+ anglesPWF = GetOpacityTransferFunction('angles')
+ anglesPWF.Points = [0.0, 0.136764707416296, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+ anglesPWF.ScalarRangeInitialized = 1
+
+ # Properties modified on anglesLUT
+ # anglesLUT.Annotations = ['1.5707963267948966', '$\\pi / 2$', '0', '0']
+ anglesLUT.Annotations = ['1.5707963267948966', '$\\pi / 2$']
+ anglesLUT.IndexedColors = [0.8313725490196079, 0.0]
+ anglesLUT.IndexedOpacities = [0.1, 1.0]
+
+ # get active source.
+ # transform1 = GetActiveSource()
+ #
+ # # get active view
+ # renderView1 = GetActiveViewOrCreate('RenderView')
+ # # uncomment following to set a specific view size
+ # # renderView1.ViewSize = [1257, 934]
+ #
+ # # get display properties
+ # transform1Display = GetDisplayProperties(transform1, view=renderView1)
+ #
+ # # Properties modified on transform1Display
+ # transform1Display.Opacity = 1.0
+ #
+ # # Properties modified on anglesLUT
+ # anglesLUT.IndexedOpacities = [0.0, 1.0]
+ #
+ # # Properties modified on anglesLUT
+ # anglesLUT.IndexedColors = [0.8196078431372549, 0.8313725490196079, 0.8274509803921568, 0.12549019607843137, 0.0, 0.3803921568627451]
+ #
+ # # Properties modified on anglesLUT
+ # anglesLUT.IndexedColors = [1.0, 1.0, 1.0, 0.12549019607843137, 0.0, 0.3803921568627451]
+ #
+ # # Properties modified on anglesLUT
+ # anglesLUT.IndexedColors = [0.0, 0.0, 0.0, 0.12549019607843137, 0.0, 0.3803921568627451]
+ #
+ # # Properties modified on anglesLUT
+ # anglesLUT.IndexedColors = [1.0, 1.0, 1.0, 0.12549019607843137, 0.0, 0.3803921568627451]
+
+ if hide_redcolor:
+ # get color transfer function/color map for 'angles'
+ anglesLUT = GetColorTransferFunction('angles')
+ anglesLUT.InterpretValuesAsCategories = 1
+ anglesLUT.AnnotationsInitialized = 1
+ anglesLUT.EnableOpacityMapping = 1
+ anglesLUT.RGBPoints = [0.0, 0.23137254902, 0.298039215686, 0.752941176471, 0.9632241725921631, 0.865, 0.865, 0.865, 1.5707963267948966, 0.705882352941, 0.0156862745098, 0.149019607843]
+ anglesLUT.ScalarRangeInitialized = 1.0
+ anglesLUT.Annotations = ['1.5707963267948966', '$\\pi / 2$', '0', '0', '0', '0', '1.5707963267948966', '1.5708']
+ anglesLUT.ActiveAnnotatedValues = ['0']
+ anglesLUT.IndexedColors = [0.8313725490196079, 0.0, 0.0392156862745098, 0.12549019607843137, 0.0, 0.3803921568627451, 0.7058823529411765, 0.01568627450980392, 0.14901960784313725, 0.8313725490196079, 0.0, 0.0392156862745098]
+ anglesLUT.IndexedOpacities = [0.1, 1.0, 1.0, 1.0]
+
+ # Properties modified on anglesLUT
+ anglesLUT.InterpretValuesAsCategories = 0
+
+ # get opacity transfer function/opacity map for 'angles'
+ anglesPWF = GetOpacityTransferFunction('angles')
+ anglesPWF.Points = [0.0, 0.136764707416296, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+ anglesPWF.ScalarRangeInitialized = 1
+
+ # Apply a preset using its name. Note this may not work as expected when presets have duplicate names.
+ anglesLUT.ApplyPreset('Preset', True)
+
+ # Apply a preset using its name. Note this may not work as expected when presets have duplicate names.
+ anglesPWF.ApplyPreset('Preset', True)
+
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.4445649345539659, 1.0, 0.5, 0.0, 0.7310624366906182, 1.0, 0.5, 0.0, 0.9879222016222671, 1.0, 0.5, 0.0, 1.254661087453241, 0.9926470518112183, 0.5, 0.0, 1.5707963267948966, 0.05882352963089943, 0.5, 0.0]
+
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.4445649345539659, 1.0, 0.5, 0.0, 0.7310624366906182, 1.0, 0.5, 0.0, 0.9879222016222671, 1.0, 0.5, 0.0, 1.254661087453241, 0.9926470518112183, 0.5, 0.0, 1.5707963267948966, 0.08088235557079315, 0.5, 0.0]
+
+ # Properties modified on anglesLUT
+ anglesLUT.RGBPoints = [0.0, 0.0, 0.0, 1.0, 0.0, 0.17254901960784313, 0.043137254901960784, 0.9215686274509803, 0.0, 0.785929, 0.247056, 0.295477, 0.0, 0.17254901960784313, 0.043137254901960784, 0.9215686274509803, 0.266739073084488, 0.41568627450980394, 0.00392156862745098, 0.9686274509803922, 0.4198669450521392, 0.48627450980392156, 0.0, 0.9725490196078431, 0.7755188552446091, 1.0, 0.058823529411764705, 0.984313725490196, 1.2052651084495876, 1.0, 0.00392156862745098, 0.0196078431372549, 1.5707963267948966, 1.0, 0.0, 0.01568627450980392]
+
+ # Properties modified on anglesLUT
+ anglesLUT.RGBPoints = [0.0, 0.0, 0.0, 1.0, 0.0, 0.17254901960784313, 0.043137254901960784, 0.9215686274509803, 0.0, 0.785929, 0.247056, 0.295477, 0.0, 0.17254901960784313, 0.043137254901960784, 0.9215686274509803, 0.266739073084488, 0.41568627450980394, 0.00392156862745098, 0.9686274509803922, 0.4198669450521392, 0.48627450980392156, 0.0, 0.9725490196078431, 0.7755188552446091, 1.0, 0.058823529411764705, 0.984313725490196, 0.9757314324378967, 1.0, 0.9607843137254902, 0.996078431372549, 1.2052651084495876, 1.0, 0.00392156862745098, 0.0196078431372549, 1.5707963267948966, 1.0, 0.0, 0.01568627450980392]
+
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.4445649345539659, 1.0, 0.5, 0.0, 0.7310624366906182, 1.0, 0.5, 0.0, 0.9879222016222671, 1.0, 0.5, 0.0, 1.254661087453241, 0.9926470518112183, 0.5, 0.0, 1.5707963267948966, 0.05147058889269829, 0.5, 0.0]
+
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.4445649345539659, 1.0, 0.5, 0.0, 0.7310624366906182, 1.0, 0.5, 0.0, 0.9879222016222671, 1.0, 0.5, 0.0, 1.254661087453241, 0.9926470518112183, 0.5, 0.0, 1.5707963267948966, 0.022058824077248573, 0.5, 0.0]
+
+ # # Properties modified on anglesPWF
+ # anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.4445649345539659, 1.0, 0.5, 0.0, 0.7310624366906182, 1.0, 0.5, 0.0, 0.9879222016222671, 1.0, 0.5, 0.0, 1.254661087453241, 0.9926470518112183, 0.5, 0.0, 1.5707963267948966, 0.0882352963089943, 0.5, 0.0]
+
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.4445649345539659, 1.0, 0.5, 0.0, 0.7310624366906182, 1.0, 0.5, 0.0, 0.9879222016222671, 1.0, 0.5, 0.0, 1.254661087453241, 0.9926470518112183, 0.5, 0.0, 1.5707963267948966, 0.075, 0.5, 0.0]
+
+
+
+#### uncomment the following to render all views
+
+
+
+ # ## -------------------------
+ # # get color transfer function/color map for 'angles'
+ # anglesLUT = GetColorTransferFunction('angles')
+ # anglesLUT.AutomaticRescaleRangeMode = "Grow and update on 'Apply'"
+ # anglesLUT.InterpretValuesAsCategories = 1
+ # anglesLUT.AnnotationsInitialized = 1
+ # anglesLUT.ShowCategoricalColorsinDataRangeOnly = 0
+ # anglesLUT.RescaleOnVisibilityChange = 0
+ # anglesLUT.EnableOpacityMapping = 1
+ # anglesLUT.RGBPoints = [0.0, 0.23137254902, 0.298039215686, 0.752941176471, 0.9632241725921631, 0.865, 0.865, 0.865, 1.5707963267948966, 0.705882352941, 0.0156862745098, 0.149019607843]
+ # anglesLUT.UseLogScale = 0
+ # anglesLUT.ColorSpace = 'Diverging'
+ # anglesLUT.UseBelowRangeColor = 0
+ # anglesLUT.BelowRangeColor = [0.0, 0.0, 0.0]
+ # anglesLUT.UseAboveRangeColor = 0
+ # anglesLUT.AboveRangeColor = [0.5, 0.5, 0.5]
+ # anglesLUT.NanColor = [1.0, 1.0, 0.0]
+ # anglesLUT.NanOpacity = 1.0
+ # anglesLUT.Discretize = 1
+ # anglesLUT.NumberOfTableValues = 256
+ # anglesLUT.ScalarRangeInitialized = 1.0
+ # anglesLUT.HSVWrap = 0
+ # anglesLUT.VectorComponent = 0
+ # anglesLUT.VectorMode = 'Magnitude'
+ # anglesLUT.AllowDuplicateScalars = 1
+ # anglesLUT.Annotations = ['1.5707963267948966', '$\\pi / 2$', '0', '0', '0', '0', '1.5707963267948966', '1.5708']
+ # anglesLUT.ActiveAnnotatedValues = ['0']
+ # anglesLUT.IndexedColors = [0.8313725490196079, 0.0, 0.0392156862745098, 0.12549019607843137, 0.0, 0.3803921568627451, 0.7058823529411765, 0.01568627450980392, 0.14901960784313725, 0.8313725490196079, 0.0, 0.0392156862745098]
+ # anglesLUT.IndexedOpacities = [0.1, 1.0, 1.0, 1.0]
+ #
+ # # Properties modified on anglesLUT
+ # anglesLUT.Annotations = ['1.5707963267948966', '$\\pi / 2$', '0', '0']
+ # anglesLUT.IndexedColors = [0.8313725490196079, 0.0, 0.0392156862745098, 0.12549019607843137, 0.0, 0.3803921568627451, 0.8313725490196079, 0.0, 0.0392156862745098]
+ # anglesLUT.IndexedOpacities = [0.1, 1.0, 1.0]
+ #
+ # # get opacity transfer function/opacity map for 'angles'
+ # anglesPWF = GetOpacityTransferFunction('angles')
+ # anglesPWF.Points = [0.0, 0.136764707416296, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 1.0, 0.5, 0.0]
+ # anglesPWF.AllowDuplicateScalars = 1
+ # anglesPWF.UseLogScale = 0
+ # anglesPWF.ScalarRangeInitialized = 1
+ #
+ # # Properties modified on anglesLUT
+ # anglesLUT.Annotations = ['1.5707963267948966', '$\\pi / 2$', '0', '0']
+ # anglesLUT.IndexedColors = [0.8313725490196079, 0.0, 0.0392156862745098, 0.12549019607843137, 0.0, 0.3803921568627451]
+ # anglesLUT.IndexedOpacities = [0.1, 1.0]
+ #
+ # # Properties modified on anglesLUT
+ # anglesLUT.IndexedColors = [1.0, 1.0, 1.0, 0.12549019607843137, 0.0, 0.3803921568627451]
+ #
+ # # Properties modified on anglesLUT
+ # anglesLUT.IndexedOpacities = [0.0, 1.0]
+ #
+ # # get active source.
+ # transform1 = GetActiveSource()
+ #
+ # # get active view
+ # renderView1 = GetActiveViewOrCreate('RenderView')
+ # # uncomment following to set a specific view size
+ # # renderView1.ViewSize = [1257, 934]
+ #
+ # # get display properties
+ # transform1Display = GetDisplayProperties(transform1, view=renderView1)
+ #
+ # # Properties modified on transform1Display
+ # transform1Display.Opacity = 1.0
+ #
+ # # Apply a preset using its name. Note this may not work as expected when presets have duplicate names.
+ # anglesPWF.ApplyPreset('Preset 6', True)
+
+
+ if hide_legend:
+ # get display properties
+ transform1Display = GetDisplayProperties(transform1, view=renderView1)
+
+ # hide color bar/color legend
+ transform1Display.SetScalarBarVisibility(renderView1, False)
+
+
+
+ # #TEST: (only for 100SP..)
+ # anglesLUT.IndexedOpacities = [1.0, 0.03]
+ # transform1Display.Opacity = 0.1 #overall Opacity
+
+
+if gamma == 'infinity': #TEST
+ # Properties modified on anglesLUT
+ anglesLUT.RGBPoints = [0.0, 0.23137254902, 0.298039215686, 0.752941176471, 0.9632241725921631, 0.865, 0.865, 0.865, 1.5707963267948966, 1.0, 0.0, 0.0]
+
+ # get opacity transfer function/opacity map for 'angles'
+ anglesPWF = GetOpacityTransferFunction('angles')
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.11764705926179886, 0.5, 0.0]
+ anglesPWF.ScalarRangeInitialized = 1
+
+ # # Apply a preset using its name. Note this may not work as expected when presets have duplicate names.
+ # anglesLUT.ApplyPreset('jet', True)
+ #
+ # # Apply a preset using its name. Note this may not work as expected when presets have duplicate names.
+ # anglesLUT.ApplyPreset('jet', True)
+ #
+ # # Apply a preset using its name. Note this may not work as expected when presets have duplicate names.
+ # anglesLUT.ApplyPreset('jet', True)
+ #
+ # # Apply a preset using its name. Note this may not work as expected when presets have duplicate names.
+ # anglesLUT.ApplyPreset('jet', True)
+
+ # Properties modified on anglesLUT
+ anglesLUT.RGBPoints = [0.0, 0.0, 0.0, 0.5625, 0.17453275066650778, 0.0, 0.0, 1.0, 0.5734655375881175, 0.0, 1.0, 1.0, 0.7729315383498405, 0.5, 1.0, 0.5, 0.9723975391115637, 1.0, 1.0, 0.0, 1.3713303260331735, 1.0, 0.0, 0.0, 1.5707963267948966, 0.6588235294117647, 0.0, 0.0]
+
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.15441176295280457, 0.5, 0.0]
+
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.11764705926179886, 0.5, 0.0]
+
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.10294117778539658, 0.5, 0.0]
+
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.07352941483259201, 0.5, 0.0]
+
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.08088235557079315, 0.5, 0.0]
+
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.0882352963089943, 0.5, 0.0]
+
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.09558823704719543, 0.5, 0.0]
+
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.10294117778539658, 0.5, 0.0]
+
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.11029411852359772, 0.5, 0.0]
+
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.09558823704719543, 0.5, 0.0]
+
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.13235294818878174, 0.5, 0.0]
+
+
+
+ ###-- ALTERNATIVE WARM TO COOL :
+ # Apply a preset using its name. Note this may not work as expected when presets have duplicate names.
+ anglesLUT.ApplyPreset('Warm to Cool (Extended)', True)
+
+ # get opacity transfer function/opacity map for 'angles'
+ anglesPWF = GetOpacityTransferFunction('angles')
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.13235294818878174, 0.5, 0.0]
+ anglesPWF.ScalarRangeInitialized = 1
+
+
+ # Apply a preset using its name. Note this may not work as expected when presets have duplicate names.
+ anglesLUT.ApplyPreset('Warm to Cool (Extended)', True)
+
+ #TEST
+ # anglesLUT.ApplyPreset('jet', True)
+
+ # invert the transfer function
+ anglesLUT.InvertTransferFunction()
+
+ # Properties modified on anglesLUT
+ anglesLUT.RGBPoints = [0.0, 0.12549, 0.0, 0.380392, 0.03926990816987245, 0.113725, 0.0235294, 0.45098, 0.0785398163397449, 0.105882, 0.0509804, 0.509804, 0.11780972450961717, 0.0392157, 0.0392157, 0.560784, 0.15707963267948963, 0.0313725, 0.0980392, 0.6, 0.19634954084936207, 0.0431373, 0.164706, 0.639216, 0.2356194490192345, 0.054902, 0.243137, 0.678431, 0.27488935718910695, 0.054902, 0.317647, 0.709804, 0.31415926535897926, 0.0509804, 0.396078, 0.741176, 0.35342917352885167, 0.0392157, 0.466667, 0.768627, 0.39269908169872414, 0.0313725, 0.537255, 0.788235, 0.450920647551377, 0.0313725, 0.615686, 0.811765, 0.5001541168221094, 0.0235294, 0.709804, 0.831373, 0.5470439579732639, 0.0509804, 0.8, 0.85098, 0.581428689566804, 0.0705882, 0.854902, 0.870588, 0.618940876646993, 0.262745, 0.901961, 0.862745, 0.6478560954306335, 0.423529, 0.941176, 0.87451, 0.6845860259400787, 0.572549, 0.964706, 0.835294, 0.7119383023785582, 0.658824, 0.980392, 0.843137, 0.7361646941267158, 0.764706, 0.980392, 0.866667, 0.7596088293041297, 0.827451, 0.980392, 0.886275, 0.7838273670706534, 0.913725, 0.988235, 0.937255, 0.7853981633974483, 1.0, 1.0, 1.0, 0.7869689597242432, 0.988235, 0.980392, 0.870588, 0.8111874974907669, 0.992157, 0.964706, 0.713725, 0.8322880045486029, 0.988235, 0.956863, 0.643137, 0.8729260763191136, 0.980392, 0.917647, 0.509804, 0.9127818915188803, 0.968627, 0.87451, 0.407843, 0.9495118220283256, 0.94902, 0.823529, 0.321569, 0.9817477042468103, 0.929412, 0.776471, 0.278431, 1.0210176124166828, 0.909804, 0.717647, 0.235294, 1.0602875205865552, 0.890196, 0.658824, 0.196078, 1.0995574287564276, 0.878431, 0.619608, 0.168627, 1.1388273369263, 0.870588, 0.54902, 0.156863, 1.1780972450961724, 0.85098, 0.47451, 0.145098, 1.2173671532660448, 0.831373, 0.411765, 0.133333, 1.2566370614359172, 0.811765, 0.345098, 0.113725, 1.2959069696057897, 0.788235, 0.266667, 0.0941176, 1.335176877775662, 0.741176, 0.184314, 0.0745098, 1.3744467859455345, 0.690196, 0.12549, 0.0627451, 1.413716694115407, 0.619608, 0.0627451, 0.0431373, 1.4922565104551517, 0.470588, 0.0156863, 0.0901961, 1.5315264186250241, 0.4, 0.00392157, 0.101961, 1.5707963267948966, 0.34902, 0.0, 0.129412]
+
+ # Properties modified on anglesLUT
+ anglesLUT.RGBPoints = [0.0, 0.12549, 0.0, 0.380392, 0.03926990816987245, 0.113725, 0.0235294, 0.45098, 0.0785398163397449, 0.105882, 0.0509804, 0.509804, 0.11780972450961717, 0.0392157, 0.0392157, 0.560784, 0.15707963267948963, 0.0313725, 0.0980392, 0.6, 0.19634954084936207, 0.0431373, 0.164706, 0.639216, 0.2356194490192345, 0.054902, 0.243137, 0.678431, 0.27488935718910695, 0.054902, 0.317647, 0.709804, 0.31415926535897926, 0.0509804, 0.396078, 0.741176, 0.35342917352885167, 0.0392157, 0.466667, 0.768627, 0.39269908169872414, 0.0313725, 0.537255, 0.788235, 0.450920647551377, 0.0313725, 0.615686, 0.811765, 0.5001541168221094, 0.0235294, 0.709804, 0.831373, 0.5470439579732639, 0.0509804, 0.8, 0.85098, 0.581428689566804, 0.0705882, 0.854902, 0.870588, 0.618940876646993, 0.262745, 0.901961, 0.862745, 0.6478560954306335, 0.423529, 0.941176, 0.87451, 0.6845860259400787, 0.572549, 0.964706, 0.835294, 0.7119383023785582, 0.658824, 0.980392, 0.843137, 0.7361646941267158, 0.764706, 0.980392, 0.866667, 0.7596088293041297, 0.827451, 0.980392, 0.886275, 0.7838273670706534, 0.913725, 0.988235, 0.937255, 0.7853981633974483, 1.0, 1.0, 1.0, 0.7869689597242432, 0.988235, 0.980392, 0.870588, 0.8111874974907669, 0.992157, 0.964706, 0.713725, 0.8322880045486029, 0.988235, 0.956863, 0.643137, 0.8729260763191136, 0.980392, 0.917647, 0.509804, 0.9127818915188803, 0.968627, 0.87451, 0.407843, 0.9495118220283256, 0.94902, 0.823529, 0.321569, 0.9817477042468103, 0.929412, 0.776471, 0.278431, 1.0210176124166828, 0.909804, 0.717647, 0.235294, 1.0602875205865552, 0.890196, 0.658824, 0.196078, 1.0995574287564276, 0.878431, 0.619608, 0.168627, 1.1388273369263, 0.870588, 0.54902, 0.156863, 1.1780972450961724, 0.85098, 0.47451, 0.145098, 1.2173671532660448, 0.831373, 0.411765, 0.133333, 1.2566370614359172, 0.811765, 0.345098, 0.113725, 1.2959069696057897, 0.788235, 0.266667, 0.0941176, 1.335176877775662, 0.741176, 0.184314, 0.0745098, 1.3744467859455345, 0.690196, 0.12549, 0.0627451, 1.413716694115407, 0.619608, 0.0627451, 0.0431373, 1.5315264186250241, 0.4, 0.00392157, 0.101961, 1.5707963267948966, 0.34902, 0.0, 0.129412]
+
+ # Properties modified on anglesLUT
+ anglesLUT.RGBPoints = [0.0, 0.12549, 0.0, 0.380392, 0.03926990816987245, 0.113725, 0.0235294, 0.45098, 0.0785398163397449, 0.105882, 0.0509804, 0.509804, 0.11780972450961717, 0.0392157, 0.0392157, 0.560784, 0.15707963267948963, 0.0313725, 0.0980392, 0.6, 0.19634954084936207, 0.0431373, 0.164706, 0.639216, 0.2356194490192345, 0.054902, 0.243137, 0.678431, 0.27488935718910695, 0.054902, 0.317647, 0.709804, 0.31415926535897926, 0.0509804, 0.396078, 0.741176, 0.35342917352885167, 0.0392157, 0.466667, 0.768627, 0.39269908169872414, 0.0313725, 0.537255, 0.788235, 0.450920647551377, 0.0313725, 0.615686, 0.811765, 0.5001541168221094, 0.0235294, 0.709804, 0.831373, 0.5470439579732639, 0.0509804, 0.8, 0.85098, 0.581428689566804, 0.0705882, 0.854902, 0.870588, 0.618940876646993, 0.262745, 0.901961, 0.862745, 0.6478560954306335, 0.423529, 0.941176, 0.87451, 0.6845860259400787, 0.572549, 0.964706, 0.835294, 0.7119383023785582, 0.658824, 0.980392, 0.843137, 0.7361646941267158, 0.764706, 0.980392, 0.866667, 0.7596088293041297, 0.827451, 0.980392, 0.886275, 0.7838273670706534, 0.913725, 0.988235, 0.937255, 0.7853981633974483, 1.0, 1.0, 1.0, 0.7869689597242432, 0.988235, 0.980392, 0.870588, 0.8111874974907669, 0.992157, 0.964706, 0.713725, 0.8322880045486029, 0.988235, 0.956863, 0.643137, 0.8729260763191136, 0.980392, 0.917647, 0.509804, 0.9127818915188803, 0.968627, 0.87451, 0.407843, 0.9495118220283256, 0.94902, 0.823529, 0.321569, 0.9817477042468103, 0.929412, 0.776471, 0.278431, 1.0210176124166828, 0.909804, 0.717647, 0.235294, 1.0602875205865552, 0.890196, 0.658824, 0.196078, 1.0995574287564276, 0.878431, 0.619608, 0.168627, 1.1388273369263, 0.870588, 0.54902, 0.156863, 1.1780972450961724, 0.85098, 0.47451, 0.145098, 1.2173671532660448, 0.831373, 0.411765, 0.133333, 1.2566370614359172, 0.811765, 0.345098, 0.113725, 1.2959069696057897, 0.788235, 0.266667, 0.0941176, 1.335176877775662, 0.741176, 0.184314, 0.0745098, 1.3744467859455345, 0.690196, 0.12549, 0.0627451, 1.413716694115407, 0.619608, 0.0627451, 0.0431373, 1.531279444694519, 0.396078431372549, 0.00392156862745098, 0.10196078431372549, 1.5315264186250241, 0.4, 0.00392157, 0.101961, 1.5707963267948966, 0.34902, 0.0, 0.129412]
+
+ # Properties modified on anglesLUT
+ anglesLUT.RGBPoints = [0.0, 0.12549, 0.0, 0.380392, 0.03926990816987245, 0.113725, 0.0235294, 0.45098, 0.0785398163397449, 0.105882, 0.0509804, 0.509804, 0.11780972450961717, 0.0392157, 0.0392157, 0.560784, 0.15707963267948963, 0.0313725, 0.0980392, 0.6, 0.19634954084936207, 0.0431373, 0.164706, 0.639216, 0.2356194490192345, 0.054902, 0.243137, 0.678431, 0.27488935718910695, 0.054902, 0.317647, 0.709804, 0.31415926535897926, 0.0509804, 0.396078, 0.741176, 0.35342917352885167, 0.0392157, 0.466667, 0.768627, 0.39269908169872414, 0.0313725, 0.537255, 0.788235, 0.450920647551377, 0.0313725, 0.615686, 0.811765, 0.5001541168221094, 0.0235294, 0.709804, 0.831373, 0.5470439579732639, 0.0509804, 0.8, 0.85098, 0.581428689566804, 0.0705882, 0.854902, 0.870588, 0.618940876646993, 0.262745, 0.901961, 0.862745, 0.6478560954306335, 0.423529, 0.941176, 0.87451, 0.6845860259400787, 0.572549, 0.964706, 0.835294, 0.7119383023785582, 0.658824, 0.980392, 0.843137, 0.7361646941267158, 0.764706, 0.980392, 0.866667, 0.7596088293041297, 0.827451, 0.980392, 0.886275, 0.7838273670706534, 0.913725, 0.988235, 0.937255, 0.7853981633974483, 1.0, 1.0, 1.0, 0.7869689597242432, 0.988235, 0.980392, 0.870588, 0.8111874974907669, 0.992157, 0.964706, 0.713725, 0.8322880045486029, 0.988235, 0.956863, 0.643137, 0.8729260763191136, 0.980392, 0.917647, 0.509804, 0.9127818915188803, 0.968627, 0.87451, 0.407843, 0.9495118220283256, 0.94902, 0.823529, 0.321569, 0.9817477042468103, 0.929412, 0.776471, 0.278431, 1.0210176124166828, 0.909804, 0.717647, 0.235294, 1.0602875205865552, 0.890196, 0.658824, 0.196078, 1.0995574287564276, 0.878431, 0.619608, 0.168627, 1.1388273369263, 0.870588, 0.54902, 0.156863, 1.1780972450961724, 0.85098, 0.47451, 0.145098, 1.2173671532660448, 0.831373, 0.411765, 0.133333, 1.2566370614359172, 0.811765, 0.345098, 0.113725, 1.2959069696057897, 0.788235, 0.266667, 0.0941176, 1.335176877775662, 0.741176, 0.184314, 0.0745098, 1.3744467859455345, 0.690196, 0.12549, 0.0627451, 1.413716694115407, 0.619608, 0.0627451, 0.0431373, 1.5016417503356934, 0.396078431372549, 0.00392156862745098, 0.10196078431372549, 1.5315264186250241, 0.4, 0.00392157, 0.101961, 1.5707963267948966, 0.34902, 0.0, 0.129412]
+
+ # Properties modified on anglesLUT
+ anglesLUT.RGBPoints = [0.0, 0.12549, 0.0, 0.380392, 0.03926990816987245, 0.113725, 0.0235294, 0.45098, 0.0785398163397449, 0.105882, 0.0509804, 0.509804, 0.11780972450961717, 0.0392157, 0.0392157, 0.560784, 0.15707963267948963, 0.0313725, 0.0980392, 0.6, 0.19634954084936207, 0.0431373, 0.164706, 0.639216, 0.2356194490192345, 0.054902, 0.243137, 0.678431, 0.27488935718910695, 0.054902, 0.317647, 0.709804, 0.31415926535897926, 0.0509804, 0.396078, 0.741176, 0.35342917352885167, 0.0392157, 0.466667, 0.768627, 0.39269908169872414, 0.0313725, 0.537255, 0.788235, 0.450920647551377, 0.0313725, 0.615686, 0.811765, 0.5001541168221094, 0.0235294, 0.709804, 0.831373, 0.5470439579732639, 0.0509804, 0.8, 0.85098, 0.581428689566804, 0.0705882, 0.854902, 0.870588, 0.618940876646993, 0.262745, 0.901961, 0.862745, 0.6478560954306335, 0.423529, 0.941176, 0.87451, 0.6845860259400787, 0.572549, 0.964706, 0.835294, 0.7119383023785582, 0.658824, 0.980392, 0.843137, 0.7361646941267158, 0.764706, 0.980392, 0.866667, 0.7596088293041297, 0.827451, 0.980392, 0.886275, 0.7838273670706534, 0.913725, 0.988235, 0.937255, 0.7853981633974483, 1.0, 1.0, 1.0, 0.7869689597242432, 0.988235, 0.980392, 0.870588, 0.8111874974907669, 0.992157, 0.964706, 0.713725, 0.8322880045486029, 0.988235, 0.956863, 0.643137, 0.8729260763191136, 0.980392, 0.917647, 0.509804, 0.9127818915188803, 0.968627, 0.87451, 0.407843, 0.9495118220283256, 0.94902, 0.823529, 0.321569, 0.9817477042468103, 0.929412, 0.776471, 0.278431, 1.0210176124166828, 0.909804, 0.717647, 0.235294, 1.0602875205865552, 0.890196, 0.658824, 0.196078, 1.0995574287564276, 0.878431, 0.619608, 0.168627, 1.1388273369263, 0.870588, 0.54902, 0.156863, 1.1780972450961724, 0.85098, 0.47451, 0.145098, 1.2173671532660448, 0.831373, 0.411765, 0.133333, 1.2566370614359172, 0.811765, 0.345098, 0.113725, 1.2959069696057897, 0.788235, 0.266667, 0.0941176, 1.335176877775662, 0.741176, 0.184314, 0.0745098, 1.3744467859455345, 0.690196, 0.12549, 0.0627451, 1.413716694115407, 0.619608, 0.0627451, 0.0431373, 1.5016417503356934, 0.396078431372549, 0.00392156862745098, 0.10196078431372549, 1.5315264186250241, 0.4, 0.00392157, 0.101961, 1.5707963267948966, 0.6352941176470588, 0.00392156862745098, 0.01568627450980392]
+
+ # Properties modified on anglesLUT
+ anglesLUT.RGBPoints = [0.0, 0.12549, 0.0, 0.380392, 0.03926990816987245, 0.113725, 0.0235294, 0.45098, 0.0785398163397449, 0.105882, 0.0509804, 0.509804, 0.11780972450961717, 0.0392157, 0.0392157, 0.560784, 0.15707963267948963, 0.0313725, 0.0980392, 0.6, 0.19634954084936207, 0.0431373, 0.164706, 0.639216, 0.2356194490192345, 0.054902, 0.243137, 0.678431, 0.27488935718910695, 0.054902, 0.317647, 0.709804, 0.31415926535897926, 0.0509804, 0.396078, 0.741176, 0.35342917352885167, 0.0392157, 0.466667, 0.768627, 0.39269908169872414, 0.0313725, 0.537255, 0.788235, 0.450920647551377, 0.0313725, 0.615686, 0.811765, 0.5001541168221094, 0.0235294, 0.709804, 0.831373, 0.5470439579732639, 0.0509804, 0.8, 0.85098, 0.581428689566804, 0.0705882, 0.854902, 0.870588, 0.618940876646993, 0.262745, 0.901961, 0.862745, 0.6478560954306335, 0.423529, 0.941176, 0.87451, 0.6845860259400787, 0.572549, 0.964706, 0.835294, 0.7119383023785582, 0.658824, 0.980392, 0.843137, 0.7361646941267158, 0.764706, 0.980392, 0.866667, 0.7596088293041297, 0.827451, 0.980392, 0.886275, 0.7838273670706534, 0.913725, 0.988235, 0.937255, 0.7853981633974483, 1.0, 1.0, 1.0, 0.7869689597242432, 0.988235, 0.980392, 0.870588, 0.8111874974907669, 0.992157, 0.964706, 0.713725, 0.8322880045486029, 0.988235, 0.956863, 0.643137, 0.8729260763191136, 0.980392, 0.917647, 0.509804, 0.9127818915188803, 0.968627, 0.87451, 0.407843, 0.9495118220283256, 0.94902, 0.823529, 0.321569, 0.9817477042468103, 0.929412, 0.776471, 0.278431, 1.0210176124166828, 0.909804, 0.717647, 0.235294, 1.0602875205865552, 0.890196, 0.658824, 0.196078, 1.0995574287564276, 0.878431, 0.619608, 0.168627, 1.1388273369263, 0.870588, 0.54902, 0.156863, 1.1780972450961724, 0.85098, 0.47451, 0.145098, 1.2173671532660448, 0.831373, 0.411765, 0.133333, 1.2566370614359172, 0.811765, 0.345098, 0.113725, 1.2959069696057897, 0.788235, 0.266667, 0.0941176, 1.335176877775662, 0.741176, 0.184314, 0.0745098, 1.3744467859455345, 0.690196, 0.12549, 0.0627451, 1.413716694115407, 0.619608, 0.0627451, 0.0431373, 1.5315264186250241, 0.4, 0.00392157, 0.101961, 1.5707963267948966, 0.6352941176470588, 0.00392156862745098, 0.01568627450980392]
+
+ # Properties modified on anglesLUT
+ anglesLUT.RGBPoints = [0.0, 0.12549, 0.0, 0.380392, 0.03926990816987245, 0.113725, 0.0235294, 0.45098, 0.0785398163397449, 0.105882, 0.0509804, 0.509804, 0.11780972450961717, 0.0392157, 0.0392157, 0.560784, 0.15707963267948963, 0.0313725, 0.0980392, 0.6, 0.19634954084936207, 0.0431373, 0.164706, 0.639216, 0.2356194490192345, 0.054902, 0.243137, 0.678431, 0.27488935718910695, 0.054902, 0.317647, 0.709804, 0.31415926535897926, 0.0509804, 0.396078, 0.741176, 0.35342917352885167, 0.0392157, 0.466667, 0.768627, 0.39269908169872414, 0.0313725, 0.537255, 0.788235, 0.450920647551377, 0.0313725, 0.615686, 0.811765, 0.5001541168221094, 0.0235294, 0.709804, 0.831373, 0.5470439579732639, 0.0509804, 0.8, 0.85098, 0.581428689566804, 0.0705882, 0.854902, 0.870588, 0.618940876646993, 0.262745, 0.901961, 0.862745, 0.6478560954306335, 0.423529, 0.941176, 0.87451, 0.6845860259400787, 0.572549, 0.964706, 0.835294, 0.7119383023785582, 0.658824, 0.980392, 0.843137, 0.7361646941267158, 0.764706, 0.980392, 0.866667, 0.7596088293041297, 0.827451, 0.980392, 0.886275, 0.7838273670706534, 0.913725, 0.988235, 0.937255, 0.7853981633974483, 1.0, 1.0, 1.0, 0.7869689597242432, 0.988235, 0.980392, 0.870588, 0.8111874974907669, 0.992157, 0.964706, 0.713725, 0.8322880045486029, 0.988235, 0.956863, 0.643137, 0.8729260763191136, 0.980392, 0.917647, 0.509804, 0.9127818915188803, 0.968627, 0.87451, 0.407843, 0.9495118220283256, 0.94902, 0.823529, 0.321569, 0.9817477042468103, 0.929412, 0.776471, 0.278431, 1.0210176124166828, 0.909804, 0.717647, 0.235294, 1.0602875205865552, 0.890196, 0.658824, 0.196078, 1.0995574287564276, 0.878431, 0.619608, 0.168627, 1.1388273369263, 0.870588, 0.54902, 0.156863, 1.1780972450961724, 0.85098, 0.47451, 0.145098, 1.2173671532660448, 0.831373, 0.411765, 0.133333, 1.2566370614359172, 0.811765, 0.345098, 0.113725, 1.2959069696057897, 0.788235, 0.266667, 0.0941176, 1.335176877775662, 0.741176, 0.184314, 0.0745098, 1.3744467859455345, 0.690196, 0.12549, 0.0627451, 1.413716694115407, 0.619608, 0.0627451, 0.0431373, 1.5115209817886353, 0.4, 0.00392157, 0.101961, 1.5707963267948966, 0.6352941176470588, 0.00392156862745098, 0.01568627450980392]
+
+ # Properties modified on anglesLUT
+ anglesLUT.RGBPoints = [0.0, 0.12549, 0.0, 0.380392, 0.03926990816987245, 0.113725, 0.0235294, 0.45098, 0.0785398163397449, 0.105882, 0.0509804, 0.509804, 0.11780972450961717, 0.0392157, 0.0392157, 0.560784, 0.15707963267948963, 0.0313725, 0.0980392, 0.6, 0.19634954084936207, 0.0431373, 0.164706, 0.639216, 0.2356194490192345, 0.054902, 0.243137, 0.678431, 0.27488935718910695, 0.054902, 0.317647, 0.709804, 0.31415926535897926, 0.0509804, 0.396078, 0.741176, 0.35342917352885167, 0.0392157, 0.466667, 0.768627, 0.39269908169872414, 0.0313725, 0.537255, 0.788235, 0.450920647551377, 0.0313725, 0.615686, 0.811765, 0.5001541168221094, 0.0235294, 0.709804, 0.831373, 0.5470439579732639, 0.0509804, 0.8, 0.85098, 0.581428689566804, 0.0705882, 0.854902, 0.870588, 0.618940876646993, 0.262745, 0.901961, 0.862745, 0.6478560954306335, 0.423529, 0.941176, 0.87451, 0.6845860259400787, 0.572549, 0.964706, 0.835294, 0.7119383023785582, 0.658824, 0.980392, 0.843137, 0.7361646941267158, 0.764706, 0.980392, 0.866667, 0.7596088293041297, 0.827451, 0.980392, 0.886275, 0.7838273670706534, 0.913725, 0.988235, 0.937255, 0.7853981633974483, 1.0, 1.0, 1.0, 0.7869689597242432, 0.988235, 0.980392, 0.870588, 0.8111874974907669, 0.992157, 0.964706, 0.713725, 0.8322880045486029, 0.988235, 0.956863, 0.643137, 0.8729260763191136, 0.980392, 0.917647, 0.509804, 0.9127818915188803, 0.968627, 0.87451, 0.407843, 0.9495118220283256, 0.94902, 0.823529, 0.321569, 0.9817477042468103, 0.929412, 0.776471, 0.278431, 1.0210176124166828, 0.909804, 0.717647, 0.235294, 1.0602875205865552, 0.890196, 0.658824, 0.196078, 1.0995574287564276, 0.878431, 0.619608, 0.168627, 1.1388273369263, 0.870588, 0.54902, 0.156863, 1.1780972450961724, 0.85098, 0.47451, 0.145098, 1.2173671532660448, 0.831373, 0.411765, 0.133333, 1.2566370614359172, 0.811765, 0.345098, 0.113725, 1.2959069696057897, 0.788235, 0.266667, 0.0941176, 1.335176877775662, 0.741176, 0.184314, 0.0745098, 1.3744467859455345, 0.690196, 0.12549, 0.0627451, 1.413716694115407, 0.619608, 0.0627451, 0.0431373, 1.4571852684020996, 0.4, 0.00392157, 0.101961, 1.5707963267948966, 0.6352941176470588, 0.00392156862745098, 0.01568627450980392]
+
+ # Properties modified on anglesLUT
+ anglesLUT.RGBPoints = [0.0, 0.12549, 0.0, 0.380392, 0.03926990816987245, 0.113725, 0.0235294, 0.45098, 0.0785398163397449, 0.105882, 0.0509804, 0.509804, 0.11780972450961717, 0.0392157, 0.0392157, 0.560784, 0.15707963267948963, 0.0313725, 0.0980392, 0.6, 0.19634954084936207, 0.0431373, 0.164706, 0.639216, 0.2356194490192345, 0.054902, 0.243137, 0.678431, 0.27488935718910695, 0.054902, 0.317647, 0.709804, 0.31415926535897926, 0.0509804, 0.396078, 0.741176, 0.35342917352885167, 0.0392157, 0.466667, 0.768627, 0.39269908169872414, 0.0313725, 0.537255, 0.788235, 0.450920647551377, 0.0313725, 0.615686, 0.811765, 0.5001541168221094, 0.0235294, 0.709804, 0.831373, 0.5470439579732639, 0.0509804, 0.8, 0.85098, 0.581428689566804, 0.0705882, 0.854902, 0.870588, 0.618940876646993, 0.262745, 0.901961, 0.862745, 0.6478560954306335, 0.423529, 0.941176, 0.87451, 0.6845860259400787, 0.572549, 0.964706, 0.835294, 0.7119383023785582, 0.658824, 0.980392, 0.843137, 0.7361646941267158, 0.764706, 0.980392, 0.866667, 0.7596088293041297, 0.827451, 0.980392, 0.886275, 0.7838273670706534, 0.913725, 0.988235, 0.937255, 0.7853981633974483, 1.0, 1.0, 1.0, 0.7869689597242432, 0.988235, 0.980392, 0.870588, 0.8111874974907669, 0.992157, 0.964706, 0.713725, 0.8322880045486029, 0.988235, 0.956863, 0.643137, 0.8729260763191136, 0.980392, 0.917647, 0.509804, 0.9127818915188803, 0.968627, 0.87451, 0.407843, 0.9495118220283256, 0.94902, 0.823529, 0.321569, 0.9817477042468103, 0.929412, 0.776471, 0.278431, 1.0210176124166828, 0.909804, 0.717647, 0.235294, 1.0602875205865552, 0.890196, 0.658824, 0.196078, 1.0995574287564276, 0.878431, 0.619608, 0.168627, 1.1388273369263, 0.870588, 0.54902, 0.156863, 1.1780972450961724, 0.85098, 0.47451, 0.145098, 1.2173671532660448, 0.831373, 0.411765, 0.133333, 1.2566370614359172, 0.811765, 0.345098, 0.113725, 1.2959069696057897, 0.788235, 0.266667, 0.0941176, 1.335176877775662, 0.741176, 0.184314, 0.0745098, 1.3744467859455345, 0.690196, 0.12549, 0.0627451, 1.413716694115407, 0.619608, 0.0627451, 0.0431373, 1.4571852684020996, 0.4, 0.00392157, 0.101961, 1.5707963267948966, 0.8117647058823529, 0.0, 0.027450980392156862]
+
+ # Properties modified on anglesLUT
+ anglesLUT.RGBPoints = [0.0, 0.12549, 0.0, 0.380392, 0.03926990816987245, 0.113725, 0.0235294, 0.45098, 0.0785398163397449, 0.105882, 0.0509804, 0.509804, 0.11780972450961717, 0.0392157, 0.0392157, 0.560784, 0.15707963267948963, 0.0313725, 0.0980392, 0.6, 0.19634954084936207, 0.0431373, 0.164706, 0.639216, 0.2356194490192345, 0.054902, 0.243137, 0.678431, 0.27488935718910695, 0.054902, 0.317647, 0.709804, 0.31415926535897926, 0.0509804, 0.396078, 0.741176, 0.35342917352885167, 0.0392157, 0.466667, 0.768627, 0.39269908169872414, 0.0313725, 0.537255, 0.788235, 0.450920647551377, 0.0313725, 0.615686, 0.811765, 0.5001541168221094, 0.0235294, 0.709804, 0.831373, 0.5470439579732639, 0.0509804, 0.8, 0.85098, 0.581428689566804, 0.0705882, 0.854902, 0.870588, 0.618940876646993, 0.262745, 0.901961, 0.862745, 0.6478560954306335, 0.423529, 0.941176, 0.87451, 0.6845860259400787, 0.572549, 0.964706, 0.835294, 0.7119383023785582, 0.658824, 0.980392, 0.843137, 0.7361646941267158, 0.764706, 0.980392, 0.866667, 0.7596088293041297, 0.827451, 0.980392, 0.886275, 0.7838273670706534, 0.913725, 0.988235, 0.937255, 0.7853981633974483, 1.0, 1.0, 1.0, 0.7869689597242432, 0.988235, 0.980392, 0.870588, 0.8111874974907669, 0.992157, 0.964706, 0.713725, 0.8322880045486029, 0.988235, 0.956863, 0.643137, 0.8729260763191136, 0.980392, 0.917647, 0.509804, 0.9127818915188803, 0.968627, 0.87451, 0.407843, 0.9495118220283256, 0.94902, 0.823529, 0.321569, 0.9817477042468103, 0.929412, 0.776471, 0.278431, 1.0210176124166828, 0.909804, 0.717647, 0.235294, 1.0602875205865552, 0.890196, 0.658824, 0.196078, 1.0995574287564276, 0.878431, 0.619608, 0.168627, 1.1388273369263, 0.870588, 0.54902, 0.156863, 1.1780972450961724, 0.85098, 0.47451, 0.145098, 1.2173671532660448, 0.831373, 0.411765, 0.133333, 1.2566370614359172, 0.811765, 0.345098, 0.113725, 1.2959069696057897, 0.788235, 0.266667, 0.0941176, 1.335176877775662, 0.741176, 0.184314, 0.0745098, 1.3744467859455345, 0.690196, 0.12549, 0.0627451, 1.413716694115407, 0.619608, 0.0627451, 0.0431373, 1.4571852684020996, 0.4, 0.00392157, 0.101961, 1.5707963267948966, 0.7490196078431373, 0.0, 0.03529411764705882]
+
+ # Properties modified on anglesLUT
+ anglesLUT.RGBPoints = [0.0, 0.12549, 0.0, 0.380392, 0.03926990816987245, 0.113725, 0.0235294, 0.45098, 0.0785398163397449, 0.105882, 0.0509804, 0.509804, 0.11780972450961717, 0.0392157, 0.0392157, 0.560784, 0.15707963267948963, 0.0313725, 0.0980392, 0.6, 0.19634954084936207, 0.0431373, 0.164706, 0.639216, 0.2356194490192345, 0.054902, 0.243137, 0.678431, 0.27488935718910695, 0.054902, 0.317647, 0.709804, 0.31415926535897926, 0.0509804, 0.396078, 0.741176, 0.35342917352885167, 0.0392157, 0.466667, 0.768627, 0.39269908169872414, 0.0313725, 0.537255, 0.788235, 0.450920647551377, 0.0313725, 0.615686, 0.811765, 0.5001541168221094, 0.0235294, 0.709804, 0.831373, 0.5470439579732639, 0.0509804, 0.8, 0.85098, 0.581428689566804, 0.0705882, 0.854902, 0.870588, 0.618940876646993, 0.262745, 0.901961, 0.862745, 0.6478560954306335, 0.423529, 0.941176, 0.87451, 0.6845860259400787, 0.572549, 0.964706, 0.835294, 0.7119383023785582, 0.658824, 0.980392, 0.843137, 0.7361646941267158, 0.764706, 0.980392, 0.866667, 0.7596088293041297, 0.827451, 0.980392, 0.886275, 0.7838273670706534, 0.913725, 0.988235, 0.937255, 0.7853981633974483, 1.0, 1.0, 1.0, 0.7869689597242432, 0.988235, 0.980392, 0.870588, 0.8111874974907669, 0.992157, 0.964706, 0.713725, 0.8322880045486029, 0.988235, 0.956863, 0.643137, 0.8729260763191136, 0.980392, 0.917647, 0.509804, 0.9127818915188803, 0.968627, 0.87451, 0.407843, 0.9495118220283256, 0.94902, 0.823529, 0.321569, 0.9817477042468103, 0.929412, 0.776471, 0.278431, 1.0210176124166828, 0.909804, 0.717647, 0.235294, 1.0602875205865552, 0.890196, 0.658824, 0.196078, 1.0995574287564276, 0.878431, 0.619608, 0.168627, 1.1388273369263, 0.870588, 0.54902, 0.156863, 1.1780972450961724, 0.85098, 0.47451, 0.145098, 1.2173671532660448, 0.831373, 0.411765, 0.133333, 1.2566370614359172, 0.811765, 0.345098, 0.113725, 1.2959069696057897, 0.788235, 0.266667, 0.0941176, 1.335176877775662, 0.741176, 0.184314, 0.0745098, 1.3744467859455345, 0.690196, 0.12549, 0.0627451, 1.413716694115407, 0.619608, 0.0627451, 0.0431373, 1.4571852684020996, 0.4, 0.00392157, 0.101961, 1.5707963267948966, 0.6784313725490196, 0.0, 0.03137254901960784]
+
+ # invert the transfer function
+ anglesLUT.InvertTransferFunction()
+
+ # invert the transfer function
+ anglesLUT.InvertTransferFunction()
+
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.0882352963089943, 0.5, 0.0]
+
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.08088235557079315, 0.5, 0.0]
+
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.0882352963089943, 0.5, 0.0]
+
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.09558823704719543, 0.5, 0.0]
+
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.10294117778539658, 0.5, 0.0]
+
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.11764705926179886, 0.5, 0.0]
+
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.15441176295280457, 0.5, 0.0]
+
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.13235294818878174, 0.5, 0.0]
+
+ # Properties modified on anglesLUT
+ anglesLUT.RGBPoints = [0.0, 0.12549, 0.0, 0.380392, 0.03926990816987245, 0.113725, 0.0235294, 0.45098, 0.0785398163397449, 0.105882, 0.0509804, 0.509804, 0.11780972450961717, 0.0392157, 0.0392157, 0.560784, 0.15707963267948963, 0.0313725, 0.0980392, 0.6, 0.19634954084936207, 0.0431373, 0.164706, 0.639216, 0.2356194490192345, 0.054902, 0.243137, 0.678431, 0.27488935718910695, 0.054902, 0.317647, 0.709804, 0.31415926535897926, 0.0509804, 0.396078, 0.741176, 0.35342917352885167, 0.0392157, 0.466667, 0.768627, 0.39269908169872414, 0.0313725, 0.537255, 0.788235, 0.450920647551377, 0.0313725, 0.615686, 0.811765, 0.5001541168221094, 0.0235294, 0.709804, 0.831373, 0.5470439579732639, 0.0509804, 0.8, 0.85098, 0.581428689566804, 0.0705882, 0.854902, 0.870588, 0.618940876646993, 0.262745, 0.901961, 0.862745, 0.6478560954306335, 0.423529, 0.941176, 0.87451, 0.6845860259400787, 0.572549, 0.964706, 0.835294, 0.7119383023785582, 0.658824, 0.980392, 0.843137, 0.7361646941267158, 0.764706, 0.980392, 0.866667, 0.7596088293041297, 0.827451, 0.980392, 0.886275, 0.7838273670706534, 0.913725, 0.988235, 0.937255, 0.7853981633974483, 1.0, 1.0, 1.0, 0.7869689597242432, 0.988235, 0.980392, 0.870588, 0.8111874974907669, 0.992157, 0.964706, 0.713725, 0.8322880045486029, 0.988235, 0.956863, 0.643137, 0.8729260763191136, 0.980392, 0.917647, 0.509804, 0.9127818915188803, 0.968627, 0.87451, 0.407843, 0.9495118220283256, 0.94902, 0.823529, 0.321569, 0.9817477042468103, 0.929412, 0.776471, 0.278431, 1.0210176124166828, 0.909804, 0.717647, 0.235294, 1.0602875205865552, 0.890196, 0.658824, 0.196078, 1.0995574287564276, 0.878431, 0.619608, 0.168627, 1.1388273369263, 0.870588, 0.54902, 0.156863, 1.1780972450961724, 0.85098, 0.47451, 0.145098, 1.2173671532660448, 0.831373, 0.411765, 0.133333, 1.2566370614359172, 0.811765, 0.345098, 0.113725, 1.2959069696057897, 0.788235, 0.266667, 0.0941176, 1.335176877775662, 0.741176, 0.184314, 0.0745098, 1.3744467859455345, 0.690196, 0.12549, 0.0627451, 1.413716694115407, 0.619608, 0.0627451, 0.0431373, 1.4571852684020996, 0.4, 0.00392157, 0.101961, 1.5707963267948966, 0.8313725490196079, 0.0, 0.0392156862745098]
+
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.09558823704719543, 0.5, 0.0]
+
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.125, 0.5, 0.0]
+
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.09558823704719543, 0.5, 0.0]
+
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.0882352963089943, 0.5, 0.0]
+
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.08088235557079315, 0.5, 0.0]
+
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.05882352963089943, 0.5, 0.0]
+
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.08088235557079315, 0.5, 0.0]
+
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.0882352963089943, 0.5, 0.0]
+
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.09558823704719543, 0.5, 0.0]
+
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.10294117778539658, 0.5, 0.0]
+
+
+ if hide_redcolor:
+ # get color transfer function/color map for 'angles'
+ anglesLUT = GetColorTransferFunction('angles')
+ anglesLUT.EnableOpacityMapping = 1
+ anglesLUT.RGBPoints = [0.0, 0.12549, 0.0, 0.380392, 0.03926990816987245, 0.113725, 0.0235294, 0.45098, 0.0785398163397449, 0.105882, 0.0509804, 0.509804, 0.11780972450961717, 0.0392157, 0.0392157, 0.560784, 0.15707963267948963, 0.0313725, 0.0980392, 0.6, 0.19634954084936207, 0.0431373, 0.164706, 0.639216, 0.2356194490192345, 0.054902, 0.243137, 0.678431, 0.27488935718910695, 0.054902, 0.317647, 0.709804, 0.31415926535897926, 0.0509804, 0.396078, 0.741176, 0.35342917352885167, 0.0392157, 0.466667, 0.768627, 0.39269908169872414, 0.0313725, 0.537255, 0.788235, 0.450920647551377, 0.0313725, 0.615686, 0.811765, 0.5001541168221094, 0.0235294, 0.709804, 0.831373, 0.5470439579732639, 0.0509804, 0.8, 0.85098, 0.581428689566804, 0.0705882, 0.854902, 0.870588, 0.618940876646993, 0.262745, 0.901961, 0.862745, 0.6478560954306335, 0.423529, 0.941176, 0.87451, 0.6845860259400787, 0.572549, 0.964706, 0.835294, 0.7119383023785582, 0.658824, 0.980392, 0.843137, 0.7361646941267158, 0.764706, 0.980392, 0.866667, 0.7596088293041297, 0.827451, 0.980392, 0.886275, 0.7838273670706534, 0.913725, 0.988235, 0.937255, 0.7853981633974483, 1.0, 1.0, 1.0, 0.7869689597242432, 0.988235, 0.980392, 0.870588, 0.8111874974907669, 0.992157, 0.964706, 0.713725, 0.8322880045486029, 0.988235, 0.956863, 0.643137, 0.8729260763191136, 0.980392, 0.917647, 0.509804, 0.9127818915188803, 0.968627, 0.87451, 0.407843, 0.9495118220283256, 0.94902, 0.823529, 0.321569, 0.9817477042468103, 0.929412, 0.776471, 0.278431, 1.0210176124166828, 0.909804, 0.717647, 0.235294, 1.0602875205865552, 0.890196, 0.658824, 0.196078, 1.0995574287564276, 0.878431, 0.619608, 0.168627, 1.1388273369263, 0.870588, 0.54902, 0.156863, 1.1780972450961724, 0.85098, 0.47451, 0.145098, 1.2173671532660448, 0.831373, 0.411765, 0.133333, 1.2566370614359172, 0.811765, 0.345098, 0.113725, 1.2959069696057897, 0.788235, 0.266667, 0.0941176, 1.335176877775662, 0.741176, 0.184314, 0.0745098, 1.3744467859455345, 0.690196, 0.12549, 0.0627451, 1.413716694115407, 0.619608, 0.0627451, 0.0431373, 1.4571852684020996, 0.4, 0.00392157, 0.101961, 1.5707963267948966, 0.8313725490196079, 0.0, 0.0392156862745098]
+ anglesLUT.ColorSpace = 'Lab'
+ anglesLUT.NanColor = [0.250004, 0.0, 0.0]
+ anglesLUT.ScalarRangeInitialized = 1.0
+ anglesLUT.Annotations = ['1.57', '$\\pi / 2$', '0.78', '$\\pi/4$', '0', '0']
+ anglesLUT.IndexedColors = [1.0, 1.0, 1.0, 1.0, 0.0, 0.0, 1.0, 0.0, 0.0]
+ anglesLUT.IndexedOpacities = [1.0, 1.0, 1.0]
+
+ # Apply a preset using its name. Note this may not work as expected when presets have duplicate names.
+ anglesLUT.ApplyPreset('Preset', True)
+
+ # get opacity transfer function/opacity map for 'angles'
+ anglesPWF = GetOpacityTransferFunction('angles')
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.10294117778539658, 0.5, 0.0]
+ anglesPWF.ScalarRangeInitialized = 1
+
+ # Apply a preset using its name. Note this may not work as expected when presets have duplicate names.
+ anglesPWF.ApplyPreset('Preset', True)
+
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.4445649345539659, 1.0, 0.5, 0.0, 0.7310624366906182, 1.0, 0.5, 0.0, 0.9879222016222671, 1.0, 0.5, 0.0, 1.254661087453241, 0.9926470518112183, 0.5, 0.0, 1.5707963267948966, 0.07352941483259201, 0.5, 0.0]
+
+ # Properties modified on anglesLUT
+ anglesLUT.RGBPoints = [0.0, 0.0, 0.0, 1.0, 0.0, 0.17254901960784313, 0.043137254901960784, 0.9215686274509803, 0.0, 0.785929, 0.247056, 0.295477, 0.0, 0.17254901960784313, 0.043137254901960784, 0.9215686274509803, 0.266739073084488, 0.41568627450980394, 0.00392156862745098, 0.9686274509803922, 0.4198669450521392, 0.48627450980392156, 0.0, 0.9725490196078431, 0.7755188552446091, 1.0, 0.058823529411764705, 0.984313725490196, 1.2052651084495876, 1.0, 0.0196078431372549, 0.14901960784313725, 1.5707963267948966, 1.0, 0.0, 0.01568627450980392]
+
+ # Properties modified on anglesLUT
+ anglesLUT.RGBPoints = [0.0, 0.0, 0.0, 1.0, 0.0, 0.17254901960784313, 0.043137254901960784, 0.9215686274509803, 0.0, 0.785929, 0.247056, 0.295477, 0.0, 0.17254901960784313, 0.043137254901960784, 0.9215686274509803, 0.266739073084488, 0.41568627450980394, 0.00392156862745098, 0.9686274509803922, 0.4198669450521392, 0.48627450980392156, 0.0, 0.9725490196078431, 0.7755188552446091, 1.0, 0.058823529411764705, 0.984313725490196, 0.9888578653335571, 1.0, 0.996078431372549, 0.9921568627450981, 1.2052651084495876, 1.0, 0.0196078431372549, 0.14901960784313725, 1.5707963267948966, 1.0, 0.0, 0.01568627450980392]
+
+ # Properties modified on anglesLUT
+ anglesLUT.RGBPoints = [0.0, 0.0, 0.0, 1.0, 0.0, 0.17254901960784313, 0.043137254901960784, 0.9215686274509803, 0.0, 0.785929, 0.247056, 0.295477, 0.0, 0.17254901960784313, 0.043137254901960784, 0.9215686274509803, 0.266739073084488, 0.41568627450980394, 0.00392156862745098, 0.9686274509803922, 0.4198669450521392, 0.48627450980392156, 0.0, 0.9725490196078431, 0.7755188552446091, 1.0, 0.058823529411764705, 0.984313725490196, 0.9888578653335571, 1.0, 0.0392156862745098, 0.47058823529411764, 1.2052651084495876, 1.0, 0.0196078431372549, 0.14901960784313725, 1.5707963267948966, 1.0, 0.0, 0.01568627450980392]
+
+ # Properties modified on anglesLUT
+ anglesLUT.RGBPoints = [0.0, 0.0, 0.0, 1.0, 0.0, 0.17254901960784313, 0.043137254901960784, 0.9215686274509803, 0.0, 0.785929, 0.247056, 0.295477, 0.0, 0.17254901960784313, 0.043137254901960784, 0.9215686274509803, 0.266739073084488, 0.41568627450980394, 0.00392156862745098, 0.9686274509803922, 0.4198669450521392, 0.48627450980392156, 0.0, 0.9725490196078431, 0.7755188552446091, 1.0, 0.058823529411764705, 0.984313725490196, 1.0413635969161987, 1.0, 0.0392156862745098, 0.47058823529411764, 1.2052651084495876, 1.0, 0.0196078431372549, 0.14901960784313725, 1.5707963267948966, 1.0, 0.0, 0.01568627450980392]
+
+
+
+
+ ###
+ # get color transfer function/color map for 'angles'
+ anglesLUT = GetColorTransferFunction('angles')
+ anglesLUT.EnableOpacityMapping = 1
+ anglesLUT.RGBPoints = [0.0, 0.0, 0.0, 1.0, 0.0, 0.17254901960784313, 0.043137254901960784, 0.9215686274509803, 0.0, 0.785929, 0.247056, 0.295477, 0.0, 0.17254901960784313, 0.043137254901960784, 0.9215686274509803, 0.266739073084488, 0.41568627450980394, 0.00392156862745098, 0.9686274509803922, 0.4198669450521392, 0.48627450980392156, 0.0, 0.9725490196078431, 0.7755188552446091, 1.0, 0.058823529411764705, 0.984313725490196, 1.0413635969161987, 1.0, 0.0392156862745098, 0.47058823529411764, 1.2052651084495876, 1.0, 0.0196078431372549, 0.14901960784313725, 1.5707963267948966, 1.0, 0.0, 0.01568627450980392]
+ anglesLUT.NanColor = [0.250004, 0.0, 0.0]
+ anglesLUT.ScalarRangeInitialized = 1.0
+ anglesLUT.Annotations = ['1.57', '$\\pi / 2$', '0.78', '$\\pi/4$', '0', '0']
+ anglesLUT.IndexedColors = [1.0, 1.0, 1.0, 1.0, 0.0, 0.0, 1.0, 0.0, 0.0]
+ anglesLUT.IndexedOpacities = [1.0, 1.0, 1.0]
+
+ # get opacity transfer function/opacity map for 'angles'
+ anglesPWF = GetOpacityTransferFunction('angles')
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.4445649345539659, 1.0, 0.5, 0.0, 0.7310624366906182, 1.0, 0.5, 0.0, 0.9879222016222671, 1.0, 0.5, 0.0, 1.254661087453241, 0.9926470518112183, 0.5, 0.0, 1.5707963267948966, 0.07352941483259201, 0.5, 0.0]
+ anglesPWF.ScalarRangeInitialized = 1
+
+ # Properties modified on anglesPWF
+ anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.4445649345539659, 1.0, 0.5, 0.0, 0.7310624366906182, 1.0, 0.5, 0.0, 0.9879222016222671, 1.0, 0.5, 0.0, 1.254661087453241, 0.9926470518112183, 0.5, 0.0, 1.5707963267948966, 0.036764707416296005, 0.5, 0.0]
+
+ # # Properties modified on anglesPWF
+ # anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.4445649345539659, 1.0, 0.5, 0.0, 0.7310624366906182, 1.0, 0.5, 0.0, 0.9879222016222671, 1.0, 0.5, 0.0, 1.254661087453241, 0.9926470518112183, 0.5, 0.0, 1.5707963267948966, 0.03, 0.5, 0.0]
+
+ #### uncomment the following to render all views
+ #### uncomment the following to render all views
+
+#### uncomment the following to render all views
+ ## ------------------------------------------
+ # # get display properties
+ # transform1Display = GetDisplayProperties(transform1, view=renderView1)
+ #
+ # # Properties modified on transform1Display
+ # transform1Display.Opacity = 1.0
+ #
+ # # get color transfer function/color map for 'angles'
+ # anglesLUT = GetColorTransferFunction('angles')
+ # anglesLUT.RGBPoints = [0.0, 0.12549, 0.0, 0.380392, 0.03926990816987245, 0.113725, 0.0235294, 0.45098, 0.0785398163397449, 0.105882, 0.0509804, 0.509804, 0.11780972450961717, 0.0392157, 0.0392157, 0.560784, 0.15707963267948963, 0.0313725, 0.0980392, 0.6, 0.19634954084936207, 0.0431373, 0.164706, 0.639216, 0.2356194490192345, 0.054902, 0.243137, 0.678431, 0.27488935718910695, 0.054902, 0.317647, 0.709804, 0.31415926535897926, 0.0509804, 0.396078, 0.741176, 0.35342917352885167, 0.0392157, 0.466667, 0.768627, 0.39269908169872414, 0.0313725, 0.537255, 0.788235, 0.450920647551377, 0.0313725, 0.615686, 0.811765, 0.5001541168221094, 0.0235294, 0.709804, 0.831373, 0.5470439579732639, 0.0509804, 0.8, 0.85098, 0.581428689566804, 0.0705882, 0.854902, 0.870588, 0.618940876646993, 0.262745, 0.901961, 0.862745, 0.6478560954306335, 0.423529, 0.941176, 0.87451, 0.6845860259400787, 0.572549, 0.964706, 0.835294, 0.7119383023785582, 0.658824, 0.980392, 0.843137, 0.7361646941267158, 0.764706, 0.980392, 0.866667, 0.7596088293041297, 0.827451, 0.980392, 0.886275, 0.7838273670706534, 0.913725, 0.988235, 0.937255, 0.7853981633974483, 1.0, 1.0, 1.0, 0.7869689597242432, 0.988235, 0.980392, 0.870588, 0.8111874974907669, 0.992157, 0.964706, 0.713725, 0.8322880045486029, 0.988235, 0.956863, 0.643137, 0.8729260763191136, 0.980392, 0.917647, 0.509804, 0.9127818915188803, 0.968627, 0.87451, 0.407843, 0.9495118220283256, 0.94902, 0.823529, 0.321569, 0.9817477042468103, 0.929412, 0.776471, 0.278431, 1.0210176124166828, 0.909804, 0.717647, 0.235294, 1.0602875205865552, 0.890196, 0.658824, 0.196078, 1.0995574287564276, 0.878431, 0.619608, 0.168627, 1.1388273369263, 0.870588, 0.54902, 0.156863, 1.1780972450961724, 0.85098, 0.47451, 0.145098, 1.2173671532660448, 0.831373, 0.411765, 0.133333, 1.2566370614359172, 0.811765, 0.345098, 0.113725, 1.2959069696057897, 0.788235, 0.266667, 0.0941176, 1.335176877775662, 0.741176, 0.184314, 0.0745098, 1.3744467859455345, 0.690196, 0.12549, 0.0627451, 1.413716694115407, 0.619608, 0.0627451, 0.0431373, 1.4571852684020996, 0.4, 0.00392157, 0.101961, 1.5707963267948966, 0.8313725490196079, 0.0, 0.0392156862745098]
+ # anglesLUT.ColorSpace = 'Lab'
+ # anglesLUT.NanColor = [0.250004, 0.0, 0.0]
+ # anglesLUT.ScalarRangeInitialized = 1.0
+ # anglesLUT.Annotations = ['1.5707963267948966', '$\\pi / 2$', '0.78', '$\\pi/4$', '0', '0']
+ # anglesLUT.IndexedColors = [1.0, 1.0, 1.0, 1.0, 0.0, 0.0, 1.0, 0.0, 0.0]
+ # anglesLUT.IndexedOpacities = [1.0, 1.0, 1.0]
+ #
+ # # get opacity transfer function/opacity map for 'angles'
+ # anglesPWF = GetOpacityTransferFunction('angles')
+ # anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.4117647111415863, 0.5, 0.0]
+ # anglesPWF.ScalarRangeInitialized = 1
+ #
+ # # Properties modified on anglesLUT
+ # anglesLUT.EnableOpacityMapping = 1
+ #
+ # # Properties modified on anglesPWF
+ # anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.41911765933036804, 0.5, 0.0]
+ #
+ # # Properties modified on anglesPWF
+ # anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.375, 0.5, 0.0]
+ #
+ # # Properties modified on anglesPWF
+ # anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.3602941334247589, 0.5, 0.0]
+ #
+ # # Properties modified on anglesPWF
+ # anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.14705882966518402, 0.5, 0.0]
+ #
+ # # Properties modified on anglesPWF
+ # anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.125, 0.5, 0.0]
+ #
+ # # Properties modified on anglesPWF
+ # anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.0, 0.5, 0.0]
+ #
+ # #### saving camera placements for all active views
+ # # get color transfer function/color map for 'angles'
+ # anglesLUT = GetColorTransferFunction('angles')
+ # anglesLUT.EnableOpacityMapping = 1
+ # anglesLUT.RGBPoints = [0.0, 0.12549, 0.0, 0.380392, 0.03926990816987245, 0.113725, 0.0235294, 0.45098, 0.0785398163397449, 0.105882, 0.0509804, 0.509804, 0.11780972450961717, 0.0392157, 0.0392157, 0.560784, 0.15707963267948963, 0.0313725, 0.0980392, 0.6, 0.19634954084936207, 0.0431373, 0.164706, 0.639216, 0.2356194490192345, 0.054902, 0.243137, 0.678431, 0.27488935718910695, 0.054902, 0.317647, 0.709804, 0.31415926535897926, 0.0509804, 0.396078, 0.741176, 0.35342917352885167, 0.0392157, 0.466667, 0.768627, 0.39269908169872414, 0.0313725, 0.537255, 0.788235, 0.450920647551377, 0.0313725, 0.615686, 0.811765, 0.5001541168221094, 0.0235294, 0.709804, 0.831373, 0.5470439579732639, 0.0509804, 0.8, 0.85098, 0.581428689566804, 0.0705882, 0.854902, 0.870588, 0.618940876646993, 0.262745, 0.901961, 0.862745, 0.6478560954306335, 0.423529, 0.941176, 0.87451, 0.6845860259400787, 0.572549, 0.964706, 0.835294, 0.7119383023785582, 0.658824, 0.980392, 0.843137, 0.7361646941267158, 0.764706, 0.980392, 0.866667, 0.7596088293041297, 0.827451, 0.980392, 0.886275, 0.7838273670706534, 0.913725, 0.988235, 0.937255, 0.7853981633974483, 1.0, 1.0, 1.0, 0.7869689597242432, 0.988235, 0.980392, 0.870588, 0.8111874974907669, 0.992157, 0.964706, 0.713725, 0.8322880045486029, 0.988235, 0.956863, 0.643137, 0.8729260763191136, 0.980392, 0.917647, 0.509804, 0.9127818915188803, 0.968627, 0.87451, 0.407843, 0.9495118220283256, 0.94902, 0.823529, 0.321569, 0.9817477042468103, 0.929412, 0.776471, 0.278431, 1.0210176124166828, 0.909804, 0.717647, 0.235294, 1.0602875205865552, 0.890196, 0.658824, 0.196078, 1.0995574287564276, 0.878431, 0.619608, 0.168627, 1.1388273369263, 0.870588, 0.54902, 0.156863, 1.1780972450961724, 0.85098, 0.47451, 0.145098, 1.2173671532660448, 0.831373, 0.411765, 0.133333, 1.2566370614359172, 0.811765, 0.345098, 0.113725, 1.2959069696057897, 0.788235, 0.266667, 0.0941176, 1.335176877775662, 0.741176, 0.184314, 0.0745098, 1.3744467859455345, 0.690196, 0.12549, 0.0627451, 1.413716694115407, 0.619608, 0.0627451, 0.0431373, 1.4571852684020996, 0.4, 0.00392157, 0.101961, 1.5707963267948966, 0.8313725490196079, 0.0, 0.0392156862745098]
+ # anglesLUT.ColorSpace = 'Lab'
+ # anglesLUT.NanColor = [0.250004, 0.0, 0.0]
+ # anglesLUT.ScalarRangeInitialized = 1.0
+ # anglesLUT.Annotations = ['1.5707963267948966', '$\\pi / 2$', '0.78', '$\\pi/4$', '0', '0']
+ # anglesLUT.IndexedColors = [1.0, 1.0, 1.0, 1.0, 0.0, 0.0, 1.0, 0.0, 0.0]
+ # anglesLUT.IndexedOpacities = [1.0, 1.0, 1.0]
+ #
+ # # Apply a preset using its name. Note this may not work as expected when presets have duplicate names.
+ # # anglesLUT.ApplyPreset('jet', True)
+ #
+ #
+ # # get opacity transfer function/opacity map for 'angles'
+ # anglesPWF = GetOpacityTransferFunction('angles')
+ # anglesPWF.Points = [0.0, 1.0, 0.5, 0.0, 0.705621357414266, 1.0, 0.5, 0.0, 0.82168139570297, 1.0, 0.5, 0.0, 0.9799451305746117, 1.0, 0.5, 0.0, 1.0960051688633157, 1.0, 0.5, 0.0, 1.5707963267948966, 0.0, 0.5, 0.0]
+ # anglesPWF.ScalarRangeInitialized = 1
+
+
+if curvature == 1:
+ # set scalar coloring
+ ColorBy(transform1Display, ('POINTS', 'curvature'))
+
+ # get color transfer function/color map for 'angles'
+ anglesLUT = GetColorTransferFunction('angles')
+ anglesLUT.AutomaticRescaleRangeMode = "Grow and update on 'Apply'"
+ anglesLUT.InterpretValuesAsCategories = 0
+ anglesLUT.AnnotationsInitialized = 0
+ anglesLUT.ShowCategoricalColorsinDataRangeOnly = 0
+ anglesLUT.RescaleOnVisibilityChange = 0
+ anglesLUT.EnableOpacityMapping = 0
+ anglesLUT.RGBPoints = [0.0, 0.23137254902, 0.298039215686, 0.752941176471, 0.7853981633974483, 0.865, 0.865, 0.865, 1.5707963267948966, 0.705882352941, 0.0156862745098, 0.149019607843]
+ anglesLUT.UseLogScale = 0
+ anglesLUT.ColorSpace = 'Diverging'
+ anglesLUT.UseBelowRangeColor = 0
+ anglesLUT.BelowRangeColor = [0.0, 0.0, 0.0]
+ anglesLUT.UseAboveRangeColor = 0
+ anglesLUT.AboveRangeColor = [0.5, 0.5, 0.5]
+ anglesLUT.NanColor = [1.0, 1.0, 0.0]
+ anglesLUT.NanOpacity = 1.0
+ anglesLUT.Discretize = 1
+ anglesLUT.NumberOfTableValues = 256
+ anglesLUT.ScalarRangeInitialized = 1.0
+ anglesLUT.HSVWrap = 0
+ anglesLUT.VectorComponent = 0
+ anglesLUT.VectorMode = 'Magnitude'
+ anglesLUT.AllowDuplicateScalars = 1
+ anglesLUT.Annotations = []
+ anglesLUT.ActiveAnnotatedValues = []
+ anglesLUT.IndexedColors = []
+ anglesLUT.IndexedOpacities = []
+
+ # Hide the scalar bar for this color map if no visible data is colored by it.
+ HideScalarBarIfNotNeeded(anglesLUT, renderView1)
+
+ # rescale color and/or opacity maps used to include current data range
+ transform1Display.RescaleTransferFunctionToDataRange(True, False)
+
+ # show color bar/color legend
+ transform1Display.SetScalarBarVisibility(renderView1, True)
+
+ # get color transfer function/color map for 'curvature'
+ curvatureLUT = GetColorTransferFunction('curvature')
+ curvatureLUT.AutomaticRescaleRangeMode = "Grow and update on 'Apply'"
+ curvatureLUT.InterpretValuesAsCategories = 0
+ curvatureLUT.AnnotationsInitialized = 0
+ curvatureLUT.ShowCategoricalColorsinDataRangeOnly = 0
+ curvatureLUT.RescaleOnVisibilityChange = 0
+ curvatureLUT.EnableOpacityMapping = 0
+ curvatureLUT.RGBPoints = [-1187.69685, 0.001462, 0.000466, 0.013866, -1178.375848332, 0.002258, 0.001295, 0.018331, -1169.057223258, 0.003279, 0.002305, 0.023708, -1159.73622159, 0.004512, 0.00349, 0.029965, -1150.4175965159998, 0.00595, 0.004843, 0.03713, -1141.0965948479998, 0.007588, 0.006356, 0.044973, -1131.7779697740002, 0.009426, 0.008022, 0.052844, -1122.4569681060002, 0.011465, 0.009828, 0.06075, -1113.1359664379997, 0.013708, 0.011771, 0.068667, -1103.8173413640002, 0.016156, 0.01384, 0.076603, -1094.4963396960002, 0.018815, 0.016026, 0.084584, -1085.1777146220002, 0.021692, 0.01832, 0.09261, -1075.8567129540002, 0.024792, 0.020715, 0.100676, -1066.53808788, 0.028123, 0.023201, 0.108787, -1057.2170862120001, 0.031696, 0.025765, 0.116965, -1047.8960845440001, 0.03552, 0.028397, 0.125209, -1038.57745947, 0.039608, 0.03109, 0.133515, -1029.2564578019999, 0.04383, 0.03383, 0.141886, -1019.9378327279999, 0.048062, 0.036607, 0.150327, -1010.6168310599999, 0.05232, 0.039407, 0.158841, -1001.2982059860002, 0.056615, 0.04216, 0.167446, -991.9772043180003, 0.060949, 0.044794, 0.176129, -982.6562026499998, 0.06533, 0.047318, 0.184892, -973.3375775760002, 0.069764, 0.049726, 0.193735, -964.0165759080003, 0.074257, 0.052017, 0.20266, -954.697950834, 0.078815, 0.054184, 0.211667, -945.3769491660001, 0.083446, 0.056225, 0.220755, -936.058324092, 0.088155, 0.058133, 0.229922, -926.737322424, 0.092949, 0.059904, 0.239164, -917.4186973499998, 0.097833, 0.061531, 0.248477, -908.0976956819999, 0.102815, 0.06301, 0.257854, -898.776694014, 0.107899, 0.064335, 0.267289, -889.4580689399997, 0.113094, 0.065492, 0.276784, -880.1370672719999, 0.118405, 0.066479, 0.286321, -870.8184421980002, 0.123833, 0.067295, 0.295879, -861.4974405300002, 0.12938, 0.067935, 0.305443, -852.1788154560002, 0.135053, 0.068391, 0.315, -842.8578137880002, 0.140858, 0.068654, 0.324538, -833.5368121200001, 0.146785, 0.068738, 0.334011, -824.218187046, 0.152839, 0.068637, 0.343404, -814.8971853780001, 0.159018, 0.068354, 0.352688, -805.5785603039999, 0.165308, 0.067911, 0.361816, -796.257558636, 0.171713, 0.067305, 0.370771, -786.9389335619999, 0.178212, 0.066576, 0.379497, -777.6179318939999, 0.184801, 0.065732, 0.387973, -768.2969302259999, 0.19146, 0.064818, 0.396152, -758.9783051520003, 0.198177, 0.063862, 0.404009, -749.6573034839998, 0.204935, 0.062907, 0.411514, -740.3386784100002, 0.211718, 0.061992, 0.418647, -731.0176767420003, 0.218512, 0.061158, 0.425392, -721.699051668, 0.225302, 0.060445, 0.431742, -712.3780500000001, 0.232077, 0.059889, 0.437695, -703.0570483320002, 0.238826, 0.059517, 0.443256, -693.738423258, 0.245543, 0.059352, 0.448436, -684.41742159, 0.25222, 0.059415, 0.453248, -675.0987965159999, 0.258857, 0.059706, 0.45771, -665.777794848, 0.265447, 0.060237, 0.46184, -656.4591697739999, 0.271994, 0.060994, 0.46566, -647.1381681059999, 0.278493, 0.061978, 0.46919, -637.817166438, 0.284951, 0.063168, 0.472451, -628.4985413639997, 0.291366, 0.064553, 0.475462, -619.1775396959998, 0.29774, 0.066117, 0.478243, -609.8589146220002, 0.304081, 0.067835, 0.480812, -600.5379129540003, 0.310382, 0.069702, 0.483186, -591.21928788, 0.316654, 0.07169, 0.48538, -581.8982862120001, 0.322899, 0.073782, 0.487408, -572.5772845440001, 0.329114, 0.075972, 0.489287, -563.25865947, 0.335308, 0.078236, 0.491024, -553.9376578020001, 0.341482, 0.080564, 0.492631, -544.6190327279999, 0.347636, 0.082946, 0.494121, -535.29803106, 0.353773, 0.085373, 0.495501, -525.9794059860003, 0.359898, 0.087831, 0.496778, -516.6584043179998, 0.366012, 0.090314, 0.49796, -507.33740264999994, 0.372116, 0.092816, 0.499053, -498.0187775760003, 0.378211, 0.095332, 0.500067, -488.6977759079998, 0.384299, 0.097855, 0.501002, -479.37915083400014, 0.390384, 0.100379, 0.501864, -470.05814916600025, 0.396467, 0.102902, 0.502658, -460.739524092, 0.402548, 0.10542, 0.503386, -451.4185224240001, 0.408629, 0.10793, 0.504052, -442.09989735, 0.414709, 0.110431, 0.504662, -432.778895682, 0.420791, 0.11292, 0.505215, -423.4578940140001, 0.426877, 0.115395, 0.505714, -414.13926893999985, 0.432967, 0.117855, 0.50616, -404.81826727199996, 0.439062, 0.120298, 0.506555, -395.49964219799983, 0.445163, 0.122724, 0.506901, -386.1786405299998, 0.451271, 0.125132, 0.507198, -376.86001545600016, 0.457386, 0.127522, 0.507448, -367.5390137879997, 0.463508, 0.129893, 0.507652, -358.21801212000025, 0.46964, 0.132245, 0.507809, -348.89938704600013, 0.47578, 0.134577, 0.507921, -339.57838537800023, 0.481929, 0.136891, 0.507989, -330.259760304, 0.488088, 0.139186, 0.508011, -320.9387586360001, 0.494258, 0.141462, 0.507988, -311.620133562, 0.500438, 0.143719, 0.50792, -302.29913189399997, 0.506629, 0.145958, 0.507806, -292.9781302260001, 0.512831, 0.148179, 0.507648, -283.65950515199984, 0.519045, 0.150383, 0.507443, -274.33850348399994, 0.52527, 0.152569, 0.507192, -265.0198784100003, 0.531507, 0.154739, 0.506895, -255.6988767419998, 0.537755, 0.156894, 0.506551, -246.38025166800014, 0.544015, 0.159033, 0.506159, -237.05925000000025, 0.550287, 0.161158, 0.505719, -227.73824833199978, 0.556571, 0.163269, 0.50523, -218.41962325800012, 0.562866, 0.165368, 0.504692, -209.09862159000022, 0.569172, 0.167454, 0.504105, -199.77999651599998, 0.57549, 0.16953, 0.503466, -190.4589948480001, 0.581819, 0.171596, 0.502777, -181.14036977399996, 0.588158, 0.173652, 0.502035, -171.81936810599996, 0.594508, 0.175701, 0.501241, -162.49836643799995, 0.600868, 0.177743, 0.500394, -153.17974136399994, 0.607238, 0.179779, 0.499492, -143.85873969599993, 0.613617, 0.181811, 0.498536, -134.5401146219997, 0.620005, 0.18384, 0.497524, -125.21911295400037, 0.626401, 0.185867, 0.496456, -115.90048788000013, 0.632805, 0.187893, 0.495332, -106.57948621200012, 0.639216, 0.189921, 0.49415, -97.25848454400034, 0.645633, 0.191952, 0.49291, -87.9398594700001, 0.652056, 0.193986, 0.491611, -78.6188578020001, 0.658483, 0.196027, 0.490253, -69.30023272800008, 0.664915, 0.198075, 0.488836, -59.979231060000075, 0.671349, 0.200133, 0.487358, -50.66060598599984, 0.677786, 0.202203, 0.485819, -41.33960431799983, 0.684224, 0.204286, 0.484219, -32.01860265000005, 0.690661, 0.206384, 0.482558, -22.69997757599981, 0.697098, 0.208501, 0.480835, -13.378975907999802, 0.703532, 0.210638, 0.479049, -4.060350834000246, 0.709962, 0.212797, 0.477201, 5.2606508340002165, 0.716387, 0.214982, 0.47529, 14.579275908000454, 0.722805, 0.217194, 0.473316, 23.90027757599978, 0.729216, 0.219437, 0.471279, 33.21890265000002, 0.735616, 0.221713, 0.46918, 42.5399043179998, 0.742004, 0.224025, 0.467018, 51.86090598599981, 0.748378, 0.226377, 0.464794, 61.179531060000045, 0.754737, 0.228772, 0.462509, 70.50053272800005, 0.761077, 0.231214, 0.460162, 79.81915780199961, 0.767398, 0.233705, 0.457755, 89.14015947000007, 0.773695, 0.236249, 0.455289, 98.45878454400031, 0.779968, 0.238851, 0.452765, 107.77978621199964, 0.786212, 0.241514, 0.450184, 117.1007878800001, 0.792427, 0.244242, 0.447543, 126.41941295400034, 0.798608, 0.24704, 0.444848, 135.74041462199966, 0.804752, 0.249911, 0.442102, 145.0590396959999, 0.810855, 0.252861, 0.439305, 154.38004136400036, 0.816914, 0.255895, 0.436461, 163.69866643799992, 0.822926, 0.259016, 0.433573, 173.01966810599993, 0.828886, 0.262229, 0.430644, 182.34066977399993, 0.834791, 0.26554, 0.427671, 191.65929484799994, 0.840636, 0.268953, 0.424666, 200.98029651599995, 0.846416, 0.272473, 0.421631, 210.2989215900002, 0.852126, 0.276106, 0.418573, 219.6199232580002, 0.857763, 0.279857, 0.415496, 228.93854833199975, 0.86332, 0.283729, 0.412403, 238.25955000000022, 0.868793, 0.287728, 0.409303, 247.58055166799954, 0.874176, 0.291859, 0.406205, 256.8991767419998, 0.879464, 0.296125, 0.403118, 266.22017841000024, 0.884651, 0.30053, 0.400047, 275.5388034839998, 0.889731, 0.305079, 0.397002, 284.8598051519998, 0.8947, 0.309773, 0.393995, 294.17843022600005, 0.899552, 0.314616, 0.391037, 303.49943189400005, 0.904281, 0.31961, 0.388137, 312.82043356199983, 0.908884, 0.324755, 0.385308, 322.1390586360001, 0.913354, 0.330052, 0.382563, 331.4600603040001, 0.917689, 0.3355, 0.379915, 340.77868537799964, 0.921884, 0.341098, 0.377376, 350.0996870460001, 0.925937, 0.346844, 0.374959, 359.41831212000034, 0.929845, 0.352734, 0.372677, 368.73931378799966, 0.933606, 0.358764, 0.370541, 378.0603154560001, 0.937221, 0.364929, 0.368567, 387.37894053000036, 0.940687, 0.371224, 0.366762, 396.6999421979997, 0.944006, 0.377643, 0.365136, 406.0185672719999, 0.94718, 0.384178, 0.363701, 415.3395689400004, 0.95021, 0.39082, 0.362468, 424.65819401399995, 0.953099, 0.397563, 0.361438, 433.97919568199995, 0.955849, 0.4044, 0.360619, 443.30019734999996, 0.958464, 0.411324, 0.360014, 452.618822424, 0.960949, 0.418323, 0.35963, 461.939824092, 0.96331, 0.42539, 0.359469, 471.2584491660002, 0.965549, 0.432519, 0.359529, 480.57945083399954, 0.967671, 0.439703, 0.35981, 489.8980759079998, 0.96968, 0.446936, 0.360311, 499.21907757600025, 0.971582, 0.45421, 0.36103, 508.5377026500005, 0.973381, 0.46152, 0.361965, 517.8587043179998, 0.975082, 0.468861, 0.363111, 527.1797059860003, 0.97669, 0.476226, 0.364466, 536.4983310599998, 0.97821, 0.483612, 0.366025, 545.8193327279998, 0.979645, 0.491014, 0.367783, 555.1379578020001, 0.981, 0.498428, 0.369734, 564.4589594700001, 0.982279, 0.505851, 0.371874, 573.7775845439996, 0.983485, 0.51328, 0.374198, 583.0985862120001, 0.984622, 0.520713, 0.376698, 592.4195878800001, 0.985693, 0.528148, 0.379371, 601.7382129539997, 0.9867, 0.535582, 0.38221, 611.0592146220001, 0.987646, 0.543015, 0.38521, 620.3778396960004, 0.988533, 0.550446, 0.388365, 629.6988413639997, 0.989363, 0.557873, 0.391671, 639.0174664379999, 0.990138, 0.565296, 0.395122, 648.3384681060004, 0.990871, 0.572706, 0.398714, 657.6594697739997, 0.991558, 0.580107, 0.402441, 666.978094848, 0.992196, 0.587502, 0.406299, 676.299096516, 0.992785, 0.594891, 0.410283, 685.61772159, 0.993326, 0.602275, 0.41439, 694.938723258, 0.993834, 0.609644, 0.418613, 704.2573483320002, 0.994309, 0.616999, 0.42295, 713.57835, 0.994738, 0.62435, 0.427397, 722.899351668, 0.995122, 0.631696, 0.431951, 732.2179767420002, 0.99548, 0.639027, 0.436607, 741.5389784099996, 0.99581, 0.646344, 0.441361, 750.8576034839998, 0.996096, 0.653659, 0.446213, 760.1786051520003, 0.996341, 0.660969, 0.45116, 769.4972302259998, 0.99658, 0.668256, 0.456192, 778.8182318939998, 0.996775, 0.675541, 0.461314, 788.1392335620003, 0.996925, 0.682828, 0.466526, 797.4578586359999, 0.997077, 0.690088, 0.471811, 806.7788603039999, 0.997186, 0.697349, 0.477182, 816.0974853780001, 0.997254, 0.704611, 0.482635, 825.4184870460001, 0.997325, 0.711848, 0.488154, 834.7371121199997, 0.997351, 0.719089, 0.493755, 844.0581137880001, 0.997351, 0.726324, 0.499428, 853.3791154560001, 0.997341, 0.733545, 0.505167, 862.6977405299997, 0.997285, 0.740772, 0.510983, 872.0187421980002, 0.997228, 0.747981, 0.516859, 881.3373672720002, 0.997138, 0.75519, 0.522806, 890.6583689399997, 0.997019, 0.762398, 0.528821, 899.9769940139997, 0.996898, 0.769591, 0.534892, 909.2979956820002, 0.996727, 0.776795, 0.541039, 918.6189973499997, 0.996571, 0.783977, 0.547233, 927.9376224239998, 0.996369, 0.791167, 0.553499, 937.2586240919998, 0.996162, 0.798348, 0.55982, 946.5772491660002, 0.995932, 0.805527, 0.566202, 955.8982508340002, 0.99568, 0.812706, 0.572645, 965.2168759080002, 0.995424, 0.819875, 0.57914, 974.5378775759998, 0.995131, 0.827052, 0.585701, 983.8565026499998, 0.994851, 0.834213, 0.592307, 993.1775043180003, 0.994524, 0.841387, 0.598983, 1002.4985059859998, 0.994222, 0.84854, 0.605696, 1011.8171310599998, 0.993866, 0.855711, 0.612482, 1021.1381327280003, 0.993545, 0.862859, 0.619299, 1030.4567578019999, 0.99317, 0.870024, 0.626189, 1039.7777594699999, 0.992831, 0.877168, 0.633109, 1049.0963845439999, 0.99244, 0.88433, 0.640099, 1058.4173862119999, 0.992089, 0.89147, 0.647116, 1067.73838788, 0.991688, 0.898627, 0.654202, 1077.057012954, 0.991332, 0.905763, 0.661309, 1086.378014622, 0.99093, 0.912915, 0.668481, 1095.6966396959995, 0.99057, 0.920049, 0.675675, 1105.0176413640004, 0.990175, 0.927196, 0.682926, 1114.3362664380004, 0.989815, 0.934329, 0.690198, 1123.657268106, 0.989434, 0.94147, 0.697519, 1132.9782697740004, 0.989077, 0.948604, 0.704863, 1142.2968948480004, 0.988717, 0.955742, 0.712242, 1151.617896516, 0.988367, 0.962878, 0.719649, 1160.93652159, 0.988033, 0.970012, 0.727077, 1170.257523258, 0.987691, 0.977154, 0.734536, 1179.576148332, 0.987387, 0.984288, 0.742002, 1188.89715, 0.987053, 0.991438, 0.749504]
+ curvatureLUT.UseLogScale = 0
+ curvatureLUT.ColorSpace = 'RGB'
+ curvatureLUT.UseBelowRangeColor = 0
+ curvatureLUT.BelowRangeColor = [0.0, 0.0, 0.0]
+ curvatureLUT.UseAboveRangeColor = 0
+ curvatureLUT.AboveRangeColor = [0.5, 0.5, 0.5]
+ curvatureLUT.NanColor = [0.0, 1.0, 0.0]
+ curvatureLUT.NanOpacity = 1.0
+ curvatureLUT.Discretize = 1
+ curvatureLUT.NumberOfTableValues = 256
+ curvatureLUT.ScalarRangeInitialized = 1.0
+ curvatureLUT.HSVWrap = 0
+ curvatureLUT.VectorComponent = 0
+ curvatureLUT.VectorMode = 'Magnitude'
+ curvatureLUT.AllowDuplicateScalars = 1
+ curvatureLUT.Annotations = []
+ curvatureLUT.ActiveAnnotatedValues = []
+ curvatureLUT.IndexedColors = []
+ curvatureLUT.IndexedOpacities = []
+
+ # get opacity transfer function/opacity map for 'curvature'
+ curvaturePWF = GetOpacityTransferFunction('curvature')
+ curvaturePWF.Points = [-1187.69685, 0.8602941036224365, 0.5, 0.0, -679.4943625218383, 0.625, 0.5, 0.0, -328.2367841697693, 0.6691176295280457, 0.5, 0.0, 396.61992227722794, 0.8676470518112183, 0.5, 0.0, 561.1175226475239, 0.6911764740943909, 0.5, 0.0, 1188.89715, 0.8014705777168274, 0.5, 0.0]
+ curvaturePWF.AllowDuplicateScalars = 1
+ curvaturePWF.UseLogScale = 0
+ curvaturePWF.ScalarRangeInitialized = 1
+
+ # Apply a preset using its name. Note this may not work as expected when presets have duplicate names.
+ curvatureLUT.ApplyPreset('Cold and Hot', True)
+
+
+
+ #NEW:
+
+ # set active source
+ SetActiveSource(transform1)
+
+ # get color transfer function/color map for 'curvature'
+ curvatureLUT = GetColorTransferFunction('curvature')
+ curvatureLUT.RGBPoints = [-1187.69685, 0.0, 1.0, 1.0, -118.22955000000002, 0.0, 0.0, 1.0, 0.6001499999999851, 0.0, 0.0, 0.501960784314, 119.42984999999999, 1.0, 0.0, 0.0, 1188.89715, 1.0, 1.0, 0.0]
+ curvatureLUT.ColorSpace = 'RGB'
+ curvatureLUT.ScalarRangeInitialized = 1.0
+
+ # get opacity transfer function/opacity map for 'curvature'
+ curvaturePWF = GetOpacityTransferFunction('curvature')
+ curvaturePWF.Points = [-1187.69685, 0.8602941036224365, 0.5, 0.0, -679.4943625218383, 0.625, 0.5, 0.0, -328.2367841697693, 0.6691176295280457, 0.5, 0.0, 396.61992227722794, 0.8676470518112183, 0.5, 0.0, 561.1175226475239, 0.6911764740943909, 0.5, 0.0, 1188.89715, 0.8014705777168274, 0.5, 0.0]
+ curvaturePWF.ScalarRangeInitialized = 1
+
+ # Properties modified on curvatureLUT
+ curvatureLUT.EnableOpacityMapping = 1
+
+ # Properties modified on curvaturePWF
+ curvaturePWF.Points = [-1187.69685, 0.6911764740943909, 0.5, 0.0, -679.4943625218383, 0.625, 0.5, 0.0, -328.2367841697693, 0.6691176295280457, 0.5, 0.0, 396.61992227722794, 0.8676470518112183, 0.5, 0.0, 561.1175226475239, 0.6911764740943909, 0.5, 0.0, 1188.89715, 0.8014705777168274, 0.5, 0.0]
+
+ # Properties modified on curvaturePWF
+ curvaturePWF.Points = [-1187.69685, 0.6691176295280457, 0.5, 0.0, -679.4943625218383, 0.625, 0.5, 0.0, -328.2367841697693, 0.6691176295280457, 0.5, 0.0, 396.61992227722794, 0.8676470518112183, 0.5, 0.0, 561.1175226475239, 0.6911764740943909, 0.5, 0.0, 1188.89715, 0.8014705777168274, 0.5, 0.0]
+
+ # Properties modified on curvaturePWF
+ curvaturePWF.Points = [-1187.69685, 0.6617646813392639, 0.5, 0.0, -679.4943625218383, 0.625, 0.5, 0.0, -328.2367841697693, 0.6691176295280457, 0.5, 0.0, 396.61992227722794, 0.8676470518112183, 0.5, 0.0, 561.1175226475239, 0.6911764740943909, 0.5, 0.0, 1188.89715, 0.8014705777168274, 0.5, 0.0]
+
+ # Properties modified on curvaturePWF
+ curvaturePWF.Points = [-1187.69685, 0.6323529481887817, 0.5, 0.0, -679.4943625218383, 0.625, 0.5, 0.0, -328.2367841697693, 0.6691176295280457, 0.5, 0.0, 396.61992227722794, 0.8676470518112183, 0.5, 0.0, 561.1175226475239, 0.6911764740943909, 0.5, 0.0, 1188.89715, 0.8014705777168274, 0.5, 0.0]
+
+ # Properties modified on curvaturePWF
+ curvaturePWF.Points = [-1187.69685, 0.5073529481887817, 0.5, 0.0, -679.4943625218383, 0.625, 0.5, 0.0, -328.2367841697693, 0.6691176295280457, 0.5, 0.0, 396.61992227722794, 0.8676470518112183, 0.5, 0.0, 561.1175226475239, 0.6911764740943909, 0.5, 0.0, 1188.89715, 0.8014705777168274, 0.5, 0.0]
+
+ # Properties modified on curvaturePWF
+ curvaturePWF.Points = [-1187.69685, 0.47058823704719543, 0.5, 0.0, -679.4943625218383, 0.625, 0.5, 0.0, -328.2367841697693, 0.6691176295280457, 0.5, 0.0, 396.61992227722794, 0.8676470518112183, 0.5, 0.0, 561.1175226475239, 0.6911764740943909, 0.5, 0.0, 1188.89715, 0.8014705777168274, 0.5, 0.0]
+
+ # Properties modified on curvaturePWF
+ curvaturePWF.Points = [-1187.69685, 0.4779411852359772, 0.5, 0.0, -679.4943625218383, 0.625, 0.5, 0.0, -328.2367841697693, 0.6691176295280457, 0.5, 0.0, 396.61992227722794, 0.8676470518112183, 0.5, 0.0, 561.1175226475239, 0.6911764740943909, 0.5, 0.0, 1188.89715, 0.8014705777168274, 0.5, 0.0]
+
+ # Properties modified on curvaturePWF
+ curvaturePWF.Points = [-1187.69685, 0.4852941334247589, 0.5, 0.0, -679.4943625218383, 0.625, 0.5, 0.0, -328.2367841697693, 0.6691176295280457, 0.5, 0.0, 396.61992227722794, 0.8676470518112183, 0.5, 0.0, 561.1175226475239, 0.6911764740943909, 0.5, 0.0, 1188.89715, 0.8014705777168274, 0.5, 0.0]
+
+ # Properties modified on curvaturePWF
+ curvaturePWF.Points = [-1187.69685, 0.5, 0.5, 0.0, -679.4943625218383, 0.625, 0.5, 0.0, -328.2367841697693, 0.6691176295280457, 0.5, 0.0, 396.61992227722794, 0.8676470518112183, 0.5, 0.0, 561.1175226475239, 0.6911764740943909, 0.5, 0.0, 1188.89715, 0.8014705777168274, 0.5, 0.0]
+
+ # Properties modified on curvaturePWF
+ curvaturePWF.Points = [-1187.69685, 0.5, 0.5, 0.0, -679.4943625218383, 0.625, 0.5, 0.0, -231.0803985595703, 0.5441176295280457, 0.5, 0.0, 396.61992227722794, 0.8676470518112183, 0.5, 0.0, 561.1175226475239, 0.6911764740943909, 0.5, 0.0, 1188.89715, 0.8014705777168274, 0.5, 0.0]
+
+ # Properties modified on curvaturePWF
+ curvaturePWF.Points = [-1187.69685, 0.5, 0.5, 0.0, -679.4943625218383, 0.625, 0.5, 0.0, -246.02752685546875, 0.5588235259056091, 0.5, 0.0, 396.61992227722794, 0.8676470518112183, 0.5, 0.0, 561.1175226475239, 0.6911764740943909, 0.5, 0.0, 1188.89715, 0.8014705777168274, 0.5, 0.0]
+
+ # Properties modified on curvaturePWF
+ curvaturePWF.Points = [-1187.69685, 0.5, 0.5, 0.0, -679.4943625218383, 0.625, 0.5, 0.0, -253.5010986328125, 0.5588235259056091, 0.5, 0.0, 396.61992227722794, 0.8676470518112183, 0.5, 0.0, 561.1175226475239, 0.6911764740943909, 0.5, 0.0, 1188.89715, 0.8014705777168274, 0.5, 0.0]
+
+ # Properties modified on curvaturePWF
+ curvaturePWF.Points = [-1187.69685, 0.5, 0.5, 0.0, -679.4943625218383, 0.625, 0.5, 0.0, -253.5010986328125, 0.5661764740943909, 0.5, 0.0, 396.61992227722794, 0.8676470518112183, 0.5, 0.0, 561.1175226475239, 0.6911764740943909, 0.5, 0.0, 1188.89715, 0.8014705777168274, 0.5, 0.0]
+
+ # Properties modified on curvaturePWF
+ curvaturePWF.Points = [-1187.69685, 0.5, 0.5, 0.0, -694.4414672851562, 0.5147058963775635, 0.5, 0.0, -253.5010986328125, 0.5661764740943909, 0.5, 0.0, 396.61992227722794, 0.8676470518112183, 0.5, 0.0, 561.1175226475239, 0.6911764740943909, 0.5, 0.0, 1188.89715, 0.8014705777168274, 0.5, 0.0]
+
+ # create a new 'Contour'
+ contour1 = Contour(Input=transform1)
+ contour1.ContourBy = ['POINTS', 'Type']
+ contour1.Isosurfaces = [2.0]
+ contour1.PointMergeMethod = 'Uniform Binning'
+
+ # Properties modified on contour1
+ contour1.ContourBy = ['POINTS', 'curvature']
+ contour1.Isosurfaces = [0.0]
+
+ # show data in view
+ contour1Display = Show(contour1, renderView1)
+
+ # trace defaults for the display properties.
+ contour1Display.Representation = 'Surface'
+ contour1Display.ColorArrayName = ['POINTS', 'curvature']
+ contour1Display.LookupTable = curvatureLUT
+ contour1Display.OSPRayScaleArray = 'curvature'
+ contour1Display.OSPRayScaleFunction = 'PiecewiseFunction'
+ contour1Display.SelectOrientationVectors = 'None'
+ contour1Display.ScaleFactor = 0.09752500000000001
+ contour1Display.SelectScaleArray = 'curvature'
+ contour1Display.GlyphType = 'Arrow'
+ contour1Display.GlyphTableIndexArray = 'curvature'
+ contour1Display.GaussianRadius = 0.00487625
+ contour1Display.SetScaleArray = ['POINTS', 'curvature']
+ contour1Display.ScaleTransferFunction = 'PiecewiseFunction'
+ contour1Display.OpacityArray = ['POINTS', 'curvature']
+ contour1Display.OpacityTransferFunction = 'PiecewiseFunction'
+ contour1Display.DataAxesGrid = 'GridAxesRepresentation'
+ contour1Display.PolarAxes = 'PolarAxesRepresentation'
+
+ # init the 'PiecewiseFunction' selected for 'OSPRayScaleFunction'
+ contour1Display.OSPRayScaleFunction.Points = [1.0, 0.8602941036224365, 0.5, 0.0, 1.213836476688135, 0.625, 0.5, 0.0, 1.3616352081298828, 0.6691176295280457, 0.5, 0.0, 1.6666333299996667, 0.8676470518112183, 0.5, 0.0, 1.7358490228652954, 0.6911764740943909, 0.5, 0.0, 2.0, 0.8014705777168274, 0.5, 0.0]
+
+ # init the 'PiecewiseFunction' selected for 'ScaleTransferFunction'
+ contour1Display.ScaleTransferFunction.Points = [0.0, 0.8602941036224365, 0.5, 0.0, 2.5142493840581125e-39, 0.625, 0.5, 0.0, 4.252039284300157e-39, 0.6691176295280457, 0.5, 0.0, 7.838150278676329e-39, 0.8676470518112183, 0.5, 0.0, 8.651975477491057e-39, 0.6911764740943909, 0.5, 0.0, 1.1757813367477812e-38, 0.8014705777168274, 0.5, 0.0]
+
+ # init the 'PiecewiseFunction' selected for 'OpacityTransferFunction'
+ contour1Display.OpacityTransferFunction.Points = [0.0, 0.8602941036224365, 0.5, 0.0, 2.5142493840581125e-39, 0.625, 0.5, 0.0, 4.252039284300157e-39, 0.6691176295280457, 0.5, 0.0, 7.838150278676329e-39, 0.8676470518112183, 0.5, 0.0, 8.651975477491057e-39, 0.6911764740943909, 0.5, 0.0, 1.1757813367477812e-38, 0.8014705777168274, 0.5, 0.0]
+
+ # show color bar/color legend
+ contour1Display.SetScalarBarVisibility(renderView1, True)
+
+ # find source
+ xMLStructuredGridReader1 = FindSource('XMLStructuredGridReader1')
+
+ # update the view to ensure updated data information
+ renderView1.Update()
+
+ # set scalar coloring using an separate color/opacity maps
+ ColorBy(contour1Display, ('POINTS', 'curvature'), True)
+
+ # Hide the scalar bar for this color map if no visible data is colored by it.
+ HideScalarBarIfNotNeeded(curvatureLUT, renderView1)
+
+ # rescale color and/or opacity maps used to include current data range
+ contour1Display.RescaleTransferFunctionToDataRange(True, False)
+
+ # show color bar/color legend
+ contour1Display.SetScalarBarVisibility(renderView1, True)
+
+ # get separate color transfer function/color map for 'curvature'
+ separate_contour1Display_curvatureLUT = GetColorTransferFunction('curvature', contour1Display, separate=True)
+ separate_contour1Display_curvatureLUT.RGBPoints = [0.0, 0.001462, 0.000466, 0.013866, 4.611414402724776e-41, 0.002258, 0.001295, 0.018331, 9.2216530241129e-41, 0.003279, 0.002305, 0.023708, 1.3833067426837675e-40, 0.004512, 0.00349, 0.029965, 1.84433060482258e-40, 0.00595, 0.004843, 0.03713, 2.3054720450950578e-40, 0.007588, 0.006356, 0.044973, 2.766495907233844e-40, 0.009426, 0.008022, 0.052844, 3.2276373475063216e-40, 0.011465, 0.009828, 0.06075, 3.688778787778825e-40, 0.013708, 0.011771, 0.068667, 4.1498026499176114e-40, 0.016156, 0.01384, 0.076603, 4.6109440901900895e-40, 0.018815, 0.016026, 0.084584, 5.071967952328902e-40, 0.021692, 0.01832, 0.09261, 5.533109392601379e-40, 0.024792, 0.020715, 0.100676, 5.994133254740192e-40, 0.028123, 0.023201, 0.108787, 6.455274695012669e-40, 0.031696, 0.025765, 0.116965, 6.9164161352851465e-40, 0.03552, 0.028397, 0.125209, 7.37743999742396e-40, 0.039608, 0.03109, 0.133515, 7.838581437696437e-40, 0.04383, 0.03383, 0.141886, 8.299605299835249e-40, 0.048062, 0.036607, 0.150327, 8.760746740107726e-40, 0.05232, 0.039407, 0.158841, 9.221770602246514e-40, 0.056615, 0.04216, 0.167446, 9.682912042518991e-40, 0.060949, 0.044794, 0.176129, 1.0144053482791495e-39, 0.06533, 0.047318, 0.184892, 1.060507734493028e-39, 0.069764, 0.049726, 0.193735, 1.1066218785202758e-39, 0.074257, 0.052017, 0.20266, 1.152724264734157e-39, 0.078815, 0.054184, 0.211667, 1.1988384087614049e-39, 0.083446, 0.056225, 0.220755, 1.2449407949752861e-39, 0.088155, 0.058133, 0.229922, 1.2910549390025338e-39, 0.092949, 0.059904, 0.239164, 1.337157325216415e-39, 0.097833, 0.061531, 0.248477, 1.3832714692436628e-39, 0.102815, 0.06301, 0.257854, 1.4293856132709107e-39, 0.107899, 0.064335, 0.267289, 1.475487999484792e-39, 0.113094, 0.065492, 0.276784, 1.5216021435120396e-39, 0.118405, 0.066479, 0.286321, 1.5677045297259182e-39, 0.123833, 0.067295, 0.295879, 1.613818673753166e-39, 0.12938, 0.067935, 0.305443, 1.6599210599670472e-39, 0.135053, 0.068391, 0.315, 1.706035203994295e-39, 0.140858, 0.068654, 0.324538, 1.7521493480215426e-39, 0.146785, 0.068738, 0.334011, 1.7982517342354242e-39, 0.152839, 0.068637, 0.343404, 1.844365878262672e-39, 0.159018, 0.068354, 0.352688, 1.890468264476553e-39, 0.165308, 0.067911, 0.361816, 1.936582408503801e-39, 0.171713, 0.067305, 0.370771, 1.982684794717682e-39, 0.178212, 0.066576, 0.379497, 2.0287989387449298e-39, 0.184801, 0.065732, 0.387973, 2.0749130827721775e-39, 0.19146, 0.064818, 0.396152, 2.121015468986056e-39, 0.198177, 0.063862, 0.404009, 2.1671296130133065e-39, 0.204935, 0.062907, 0.411514, 2.213231999227185e-39, 0.211718, 0.061992, 0.418647, 2.2593461432544328e-39, 0.218512, 0.061158, 0.425392, 2.305448529468314e-39, 0.225302, 0.060445, 0.431742, 2.351562673495562e-39, 0.232077, 0.059889, 0.437695, 2.3976768175228098e-39, 0.238826, 0.059517, 0.443256, 2.443779203736691e-39, 0.245543, 0.059352, 0.448436, 2.4898933477639387e-39, 0.25222, 0.059415, 0.453248, 2.53599573397782e-39, 0.258857, 0.059706, 0.45771, 2.5821098780050677e-39, 0.265447, 0.060237, 0.46184, 2.628212264218949e-39, 0.271994, 0.060994, 0.46566, 2.6743264082461966e-39, 0.278493, 0.061978, 0.46919, 2.7204405522734444e-39, 0.284951, 0.063168, 0.472451, 2.7665429384873256e-39, 0.291366, 0.064553, 0.475462, 2.8126570825145736e-39, 0.29774, 0.066117, 0.478243, 2.8587594687284522e-39, 0.304081, 0.067835, 0.480812, 2.9048736127557e-39, 0.310382, 0.069702, 0.483186, 2.950975998969581e-39, 0.316654, 0.07169, 0.48538, 2.9970901429968286e-39, 0.322899, 0.073782, 0.487408, 3.0432042870240766e-39, 0.329114, 0.075972, 0.489287, 3.089306673237958e-39, 0.335308, 0.078236, 0.491024, 3.135420817265206e-39, 0.341482, 0.080564, 0.492631, 3.181523203479087e-39, 0.347636, 0.082946, 0.494121, 3.2276373475063345e-39, 0.353773, 0.085373, 0.495501, 3.273739733720213e-39, 0.359898, 0.087831, 0.496778, 3.319853877747464e-39, 0.366012, 0.090314, 0.49796, 3.365968021774711e-39, 0.372116, 0.092816, 0.499053, 3.41207040798859e-39, 0.378211, 0.095332, 0.500067, 3.4581845520158405e-39, 0.384299, 0.097855, 0.501002, 3.504286938229719e-39, 0.390384, 0.100379, 0.501864, 3.5504010822569665e-39, 0.396467, 0.102902, 0.502658, 3.5965034684708484e-39, 0.402548, 0.10542, 0.503386, 3.642617612498096e-39, 0.408629, 0.10793, 0.504052, 3.688719998711977e-39, 0.414709, 0.110431, 0.504662, 3.734834142739225e-39, 0.420791, 0.11292, 0.505215, 3.7809482867664724e-39, 0.426877, 0.115395, 0.505714, 3.8270506729803536e-39, 0.432967, 0.117855, 0.50616, 3.873164817007602e-39, 0.439062, 0.120298, 0.506555, 3.919267203221483e-39, 0.445163, 0.122724, 0.506901, 3.96538134724873e-39, 0.451271, 0.125132, 0.507198, 4.011483733462609e-39, 0.457386, 0.127522, 0.507448, 4.0575978774898596e-39, 0.463508, 0.129893, 0.507652, 4.103712021517105e-39, 0.46964, 0.132245, 0.507809, 4.149814407730986e-39, 0.47578, 0.134577, 0.507921, 4.1959285517582336e-39, 0.481929, 0.136891, 0.507989, 4.242030937972115e-39, 0.488088, 0.139186, 0.508011, 4.288145081999363e-39, 0.494258, 0.141462, 0.507988, 4.334247468213244e-39, 0.500438, 0.143719, 0.50792, 4.3803616122404915e-39, 0.506629, 0.145958, 0.507806, 4.4264757562677396e-39, 0.512831, 0.148179, 0.507648, 4.472578142481621e-39, 0.519045, 0.150383, 0.507443, 4.518692286508868e-39, 0.52527, 0.152569, 0.507192, 4.564794672722747e-39, 0.531507, 0.154739, 0.506895, 4.6109088167499975e-39, 0.537755, 0.156894, 0.506551, 4.657011202963876e-39, 0.544015, 0.159033, 0.506159, 4.703125346991124e-39, 0.550287, 0.161158, 0.505719, 4.749239491018374e-39, 0.556571, 0.163269, 0.50523, 4.795341877232253e-39, 0.562866, 0.165368, 0.504692, 4.841456021259501e-39, 0.569172, 0.167454, 0.504105, 4.887558407473382e-39, 0.57549, 0.16953, 0.503466, 4.9336725515006294e-39, 0.581819, 0.171596, 0.502777, 4.9797749377145106e-39, 0.588158, 0.173652, 0.502035, 5.025889081741759e-39, 0.594508, 0.175701, 0.501241, 5.072003225769006e-39, 0.600868, 0.177743, 0.500394, 5.118105611982888e-39, 0.607238, 0.179779, 0.499492, 5.1642197560101354e-39, 0.613617, 0.181811, 0.498536, 5.2103221422240166e-39, 0.620005, 0.18384, 0.497524, 5.256436286251262e-39, 0.626401, 0.185867, 0.496456, 5.302538672465143e-39, 0.632805, 0.187893, 0.495332, 5.3486528164923907e-39, 0.639216, 0.189921, 0.49415, 5.394766960519639e-39, 0.645633, 0.191952, 0.49291, 5.44086934673352e-39, 0.652056, 0.193986, 0.491611, 5.486983490760767e-39, 0.658483, 0.196027, 0.490253, 5.5330858769746485e-39, 0.664915, 0.198075, 0.488836, 5.5792000210018966e-39, 0.671349, 0.200133, 0.487358, 5.625302407215778e-39, 0.677786, 0.202203, 0.485819, 5.671416551243026e-39, 0.684224, 0.204286, 0.484219, 5.717530695270273e-39, 0.690661, 0.206384, 0.482558, 5.7636330814841545e-39, 0.697098, 0.208501, 0.480835, 5.8097472255114025e-39, 0.703532, 0.210638, 0.479049, 5.855849611725281e-39, 0.709962, 0.212797, 0.477201, 5.901963755752531e-39, 0.716387, 0.214982, 0.47529, 5.948066141966412e-39, 0.722805, 0.217194, 0.473316, 5.994180285993657e-39, 0.729216, 0.219437, 0.471279, 6.040282672207538e-39, 0.735616, 0.221713, 0.46918, 6.086396816234787e-39, 0.742004, 0.224025, 0.467018, 6.132510960262034e-39, 0.748378, 0.226377, 0.464794, 6.178613346475916e-39, 0.754737, 0.228772, 0.462509, 6.224727490503163e-39, 0.761077, 0.231214, 0.460162, 6.270829876717042e-39, 0.767398, 0.233705, 0.457755, 6.316944020744293e-39, 0.773695, 0.236249, 0.455289, 6.363046406958174e-39, 0.779968, 0.238851, 0.452765, 6.409160550985419e-39, 0.786212, 0.241514, 0.450184, 6.455274695012669e-39, 0.792427, 0.244242, 0.447543, 6.50137708122655e-39, 0.798608, 0.24704, 0.444848, 6.547491225253795e-39, 0.804752, 0.249911, 0.442102, 6.593593611467676e-39, 0.810855, 0.252861, 0.439305, 6.639707755494928e-39, 0.816914, 0.255895, 0.436461, 6.685810141708806e-39, 0.822926, 0.259016, 0.433573, 6.731924285736054e-39, 0.828886, 0.262229, 0.430644, 6.778038429763301e-39, 0.834791, 0.26554, 0.427671, 6.824140815977182e-39, 0.840636, 0.268953, 0.424666, 6.870254960004431e-39, 0.846416, 0.272473, 0.421631, 6.916357346218312e-39, 0.852126, 0.276106, 0.418573, 6.96247149024556e-39, 0.857763, 0.279857, 0.415496, 7.008573876459438e-39, 0.86332, 0.283729, 0.412403, 7.054688020486688e-39, 0.868793, 0.287728, 0.409303, 7.100802164513933e-39, 0.874176, 0.291859, 0.406205, 7.146904550727814e-39, 0.879464, 0.296125, 0.403118, 7.193018694755065e-39, 0.884651, 0.30053, 0.400047, 7.239121080968944e-39, 0.889731, 0.305079, 0.397002, 7.285235224996191e-39, 0.8947, 0.309773, 0.393995, 7.331337611210073e-39, 0.899552, 0.314616, 0.391037, 7.37745175523732e-39, 0.904281, 0.31961, 0.388137, 7.423565899264569e-39, 0.908884, 0.324755, 0.385308, 7.46966828547845e-39, 0.913354, 0.330052, 0.382563, 7.515782429505697e-39, 0.917689, 0.3355, 0.379915, 7.561884815719576e-39, 0.921884, 0.341098, 0.377376, 7.607998959746826e-39, 0.925937, 0.346844, 0.374959, 7.654101345960707e-39, 0.929845, 0.352734, 0.372677, 7.700215489987953e-39, 0.933606, 0.358764, 0.370541, 7.746329634015203e-39, 0.937221, 0.364929, 0.368567, 7.792432020229085e-39, 0.940687, 0.371224, 0.366762, 7.83854616425633e-39, 0.944006, 0.377643, 0.365136, 7.88464855047021e-39, 0.94718, 0.384178, 0.363701, 7.93076269449746e-39, 0.95021, 0.39082, 0.362468, 7.976865080711339e-39, 0.953099, 0.397563, 0.361438, 8.022979224738588e-39, 0.955849, 0.4044, 0.360619, 8.069093368765835e-39, 0.958464, 0.411324, 0.360014, 8.115195754979717e-39, 0.960949, 0.418323, 0.35963, 8.161309899006964e-39, 0.96331, 0.42539, 0.359469, 8.207412285220845e-39, 0.965549, 0.432519, 0.359529, 8.253526429248091e-39, 0.967671, 0.439703, 0.35981, 8.299628815461972e-39, 0.96968, 0.446936, 0.360311, 8.345742959489222e-39, 0.971582, 0.45421, 0.36103, 8.391845345703104e-39, 0.973381, 0.46152, 0.361965, 8.437959489730349e-39, 0.975082, 0.468861, 0.363111, 8.484073633757599e-39, 0.97669, 0.476226, 0.364466, 8.530176019971477e-39, 0.97821, 0.483612, 0.366025, 8.576290163998726e-39, 0.979645, 0.491014, 0.367783, 8.622392550212607e-39, 0.981, 0.498428, 0.369734, 8.668506694239854e-39, 0.982279, 0.505851, 0.371874, 8.714609080453733e-39, 0.983485, 0.51328, 0.374198, 8.760723224480983e-39, 0.984622, 0.520713, 0.376698, 8.806837368508232e-39, 0.985693, 0.528148, 0.379371, 8.85293975472211e-39, 0.9867, 0.535582, 0.38221, 8.89905389874936e-39, 0.987646, 0.543015, 0.38521, 8.945156284963242e-39, 0.988533, 0.550446, 0.388365, 8.991270428990486e-39, 0.989363, 0.557873, 0.391671, 9.037372815204368e-39, 0.990138, 0.565296, 0.395122, 9.083486959231618e-39, 0.990871, 0.572706, 0.398714, 9.129601103258864e-39, 0.991558, 0.580107, 0.402441, 9.175703489472745e-39, 0.992196, 0.587502, 0.406299, 9.221817633499992e-39, 0.992785, 0.594891, 0.410283, 9.267920019713874e-39, 0.993326, 0.602275, 0.41439, 9.314034163741121e-39, 0.993834, 0.609644, 0.418613, 9.360136549955002e-39, 0.994309, 0.616999, 0.42295, 9.406250693982251e-39, 0.994738, 0.62435, 0.427397, 9.452364838009498e-39, 0.995122, 0.631696, 0.431951, 9.49846722422338e-39, 0.99548, 0.639027, 0.436607, 9.544581368250624e-39, 0.99581, 0.646344, 0.441361, 9.590683754464506e-39, 0.996096, 0.653659, 0.446213, 9.636797898491756e-39, 0.996341, 0.660969, 0.45116, 9.682900284705634e-39, 0.99658, 0.668256, 0.456192, 9.729014428732883e-39, 0.996775, 0.675541, 0.461314, 9.775128572760133e-39, 0.996925, 0.682828, 0.466526, 9.821230958974011e-39, 0.997077, 0.690088, 0.471811, 9.867345103001259e-39, 0.997186, 0.697349, 0.477182, 9.91344748921514e-39, 0.997254, 0.704611, 0.482635, 9.959561633242389e-39, 0.997325, 0.711848, 0.488154, 1.0005664019456267e-38, 0.997351, 0.719089, 0.493755, 1.0051778163483517e-38, 0.997351, 0.726324, 0.499428, 1.0097892307510765e-38, 0.997341, 0.733545, 0.505167, 1.0143994693724643e-38, 0.997285, 0.740772, 0.510983, 1.0190108837751893e-38, 0.997228, 0.747981, 0.516859, 1.0236211223965776e-38, 0.997138, 0.75519, 0.522806, 1.0282325367993021e-38, 0.997019, 0.762398, 0.528821, 1.0328427754206902e-38, 0.996898, 0.769591, 0.534892, 1.0374541898234152e-38, 0.996727, 0.776795, 0.541039, 1.0420656042261397e-38, 0.996571, 0.783977, 0.547233, 1.0466758428475278e-38, 0.996369, 0.791167, 0.553499, 1.0512872572502527e-38, 0.996162, 0.798348, 0.55982, 1.0558974958716408e-38, 0.995932, 0.805527, 0.566202, 1.0605089102743655e-38, 0.99568, 0.812706, 0.572645, 1.0651191488957537e-38, 0.995424, 0.819875, 0.57914, 1.0697305632984781e-38, 0.995131, 0.827052, 0.585701, 1.0743408019198663e-38, 0.994851, 0.834213, 0.592307, 1.0789522163225914e-38, 0.994524, 0.841387, 0.598983, 1.0835636307253159e-38, 0.994222, 0.84854, 0.605696, 1.088173869346704e-38, 0.993866, 0.855711, 0.612482, 1.092785283749429e-38, 0.993545, 0.862859, 0.619299, 1.0973955223708168e-38, 0.99317, 0.870024, 0.626189, 1.1020069367735416e-38, 0.992831, 0.877168, 0.633109, 1.1066171753949297e-38, 0.99244, 0.88433, 0.640099, 1.1112285897976546e-38, 0.992089, 0.89147, 0.647116, 1.1158400042003793e-38, 0.991688, 0.898627, 0.654202, 1.1204502428217674e-38, 0.991332, 0.905763, 0.661309, 1.1250616572244922e-38, 0.99093, 0.912915, 0.668481, 1.12967189584588e-38, 0.99057, 0.920049, 0.675675, 1.1342833102486052e-38, 0.990175, 0.927196, 0.682926, 1.1388935488699933e-38, 0.989815, 0.934329, 0.690198, 1.1435049632727178e-38, 0.989434, 0.94147, 0.697519, 1.1481163776754428e-38, 0.989077, 0.948604, 0.704863, 1.1527266162968309e-38, 0.988717, 0.955742, 0.712242, 1.1573380306995554e-38, 0.988367, 0.962878, 0.719649, 1.1619482693209435e-38, 0.988033, 0.970012, 0.727077, 1.1665596837236684e-38, 0.987691, 0.977154, 0.734536, 1.1711699223450565e-38, 0.987387, 0.984288, 0.742002, 1.1757813367477812e-38, 0.987053, 0.991438, 0.749504]
+ separate_contour1Display_curvatureLUT.ColorSpace = 'RGB'
+ separate_contour1Display_curvatureLUT.NanColor = [0.0, 1.0, 0.0]
+ separate_contour1Display_curvatureLUT.ScalarRangeInitialized = 1.0
+
+ # get separate opacity transfer function/opacity map for 'curvature'
+ separate_contour1Display_curvaturePWF = GetOpacityTransferFunction('curvature', contour1Display, separate=True)
+ separate_contour1Display_curvaturePWF.Points = [0.0, 0.8602941036224365, 0.5, 0.0, 2.5142493840581125e-39, 0.625, 0.5, 0.0, 4.252039284300157e-39, 0.6691176295280457, 0.5, 0.0, 7.838150278676329e-39, 0.8676470518112183, 0.5, 0.0, 8.651975477491057e-39, 0.6911764740943909, 0.5, 0.0, 1.1757813367477812e-38, 0.8014705777168274, 0.5, 0.0]
+ separate_contour1Display_curvaturePWF.ScalarRangeInitialized = 1
+
+ # Apply a preset using its name. Note this may not work as expected when presets have duplicate names.
+ separate_contour1Display_curvatureLUT.ApplyPreset('X Ray', True)
+
+ # hide color bar/color legend
+ contour1Display.SetScalarBarVisibility(renderView1, False)
+
+ # hide data in view
+ # Hide(line1, renderView1)
+
+
+
+ # get color legend/bar for curvatureLUT in view renderView1
+ curvatureLUTColorBar = GetScalarBar(curvatureLUT, renderView1)
+ curvatureLUTColorBar.Title = 'curvature'
+ curvatureLUTColorBar.ComponentTitle = ''
+
+ # Properties modified on curvatureLUTColorBar
+ curvatureLUTColorBar.Title = '$ \\kappa $'
+ curvatureLUTColorBar.HorizontalTitle = 1
+ curvatureLUTColorBar.TitleFontSize = 24
+ curvatureLUTColorBar.LabelFontSize = 20
+
+ transform1Display.Opacity = 0.01 #overall Opacity
+
+ # get display properties
+ transform1Display = GetDisplayProperties(transform1, view=renderView1)
+
+ # rescale color and/or opacity maps used to exactly fit the current data range
+ transform1Display.RescaleTransferFunctionToDataRange(False, True)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+# update the view to ensure updated data information
+renderView1.Update()
+
+
+# ----------------- EXPORT -----------------
+# save screenshot
+# SaveScreenshot('/home/klaus/Desktop/PhaseDiagramPlot.png', renderView1, ImageResolution=[1257, 934])
+# SaveScreenshot('/home/klaus/Desktop/PhaseDiagramPlot.png', renderView1, ImageResolution=[2514, 1868])
+# SaveScreenshot('/home/klaus/Desktop/PhaseDiagramPlot.png', renderView1, ImageResolution=[1063, 657])
+
+if gamma == '0' :
+ # SaveScreenshot('/home/klaus/Desktop/3DPhaseDiagramPlot_Gamma0.png', renderView1, ImageResolution=[2126, 1314])
+ SaveScreenshot('/home/klaus/Desktop/3DPhaseDiagramPlot_Gamma0.png', renderView1, ImageResolution=[2126, 1314],OverrideColorPalette='WhiteBackground')
+
+elif gamma == 'infinity':
+ # SaveScreenshot('/home/klaus/Desktop/3DPhaseDiagramPlot_GammaInf.png', renderView1, ImageResolution=[2126, 1314])
+ SaveScreenshot('/home/klaus/Desktop/3DPhaseDiagramPlot_GammaInf.png', renderView1, ImageResolution=[2126, 1314],OverrideColorPalette='WhiteBackground')
+# export view
+# ExportView('/home/klaus/Desktop/PhaseDiagramPlot.pdf', view=renderView1)
diff --git a/src/PhaseDiagram_PlotScript_BetaSmallerOne.py b/src/PhaseDiagram_PlotScript_BetaSmallerOne.py
index 01f93eb18728f634274114ab6d037be04f31716b..ef746bf66aed7756b8b03f72a6c4a89a5b05680d 100644
--- a/src/PhaseDiagram_PlotScript_BetaSmallerOne.py
+++ b/src/PhaseDiagram_PlotScript_BetaSmallerOne.py
@@ -15,7 +15,7 @@ paraview.simple._DisableFirstRenderCameraReset()
case = 1
case = 2
#
-contour = 0
+contour = 1
# create a new 'XML Structured Grid Reader'
diff --git a/src/Plot-1-ParameterFamily.py b/src/Plot-1-ParameterFamily.py
index 173f2c6f47dad29aaa0a29c877068b344c3b54c1..efc223cf27c7beddde6da6eec816f4d35a391480 100644
--- a/src/Plot-1-ParameterFamily.py
+++ b/src/Plot-1-ParameterFamily.py
@@ -127,7 +127,8 @@ kappas = []
alphas = []
# G.append(float(s[0]))
-
+G_container = []
+abar_container = []
for t in T :
@@ -136,27 +137,48 @@ for t in T :
# print('abar_current', abar_current)
abar_current[abar_current < 1e-10] = 0
# print('abar_current', abar_current)
-
# G = np.array([[2*q1, q12+2*q3], [q12+2*q3,2*q2] ])
G = [abar_current[0], abar_current[1] , (2*abar_current[0]*abar_current[1])**0.5 ]
-
+ G_container.append(G)
+ abar_container.append(abar_current)
e = [(abar_current[0]/(abar_current[0]+abar_current[1]))**0.5, (abar_current[1]/(abar_current[0]+abar_current[1]))**0.5]
kappa = abar_current[0]+abar_current[1]
alpha = math.atan2(e[1], e[0])
-
print('angle current:', alpha)
-
kappas.append(kappa)
alphas.append(alpha)
+
+# idx_1 = np.where(alphas == np.pi/4)
+idx_1 = np.where(np.round(alphas,3) == round(np.pi/3,3))
+idx_2 = np.where(np.round(alphas,3) == 0.0)
+idx_3 = np.where(np.round(alphas,3) == round(np.pi/4,3))
+
+# idx_3 = np.where(alphas == 0)
+
+print('Index idx_1:', idx_1)
+print('Index idx_2:', idx_2)
+print('Index idx_3:', idx_3)
+print('Index idx_1[0][0]:', idx_1[0][0])
+print('Index idx_2[0][0]:', idx_2[0][0])
+print('Index idx_3[0][0]:', idx_3[0][0])
+
alphas = np.array(alphas)
kappas = np.array(kappas)
+print('alphas[idx_1[0][0]]', alphas[idx_1[0][0]])
+print('kappas[idx_1[0][0]]', kappas[idx_1[0][0]])
+print('alphas[idx_2[0][0]]', alphas[idx_2[0][0]])
+print('kappas[idx_2[0][0]]', kappas[idx_2[0][0]])
+print('alphas[idx_3[0][0]]', alphas[idx_3[0][0]])
+print('kappas[idx_3[0][0]]', kappas[idx_3[0][0]])
+
-print('kappas:',kappas)
-print('alphas:',alphas)
+
+# print('kappas:',kappas)
+# print('alphas:',alphas)
print('min alpha:', min(alphas))
print('min kappa:', min(kappas))
@@ -186,9 +208,24 @@ ax.plot(alphas, kappas, 'royalblue', zorder=3, )
ax.plot(-1.0*alphas, kappas, 'red', zorder=3, )
+ax.scatter(-1*alphas[idx_1[0][0]],kappas[idx_1[0][0]], marker='x', color='black',zorder=5, s=40)
+ax.scatter(alphas[idx_2[0][0]],kappas[idx_2[0][0]], marker='x', color='black' ,zorder=5, s=40)
+ax.scatter(alphas[idx_3[0][0]],kappas[idx_3[0][0]], marker='x', color='black', zorder=5, s=40)
+
+label = [r'$\mathcal S^+_{Q,B}$', '$T\mathcal S^+_{Q,B}$']
+
+
+# ax.annotate(label, xy=np.array([[np.pi/4,0.55],[np.pi/4,0.55]]))
+
+
+
+ax.annotate(r'$\mathcal S^+_{Q,B}$', np.array([np.pi/4,0.55]), color= 'royalblue', size=12)
+ax.annotate(r'$T\mathcal S^+_{Q,B}$', np.array([-np.pi/4-0.55,0.55]), color= 'red', size=12)
+
+#
-ax.set_xlabel(r"angle $\alpha$")
-ax.set_ylabel(r"curvature $\kappa$")
+ax.set_xlabel(r"angle $\alpha$" ,fontsize=10, labelpad=0)
+ax.set_ylabel(r"curvature $\kappa$", fontsize=10, labelpad=0)
diff --git a/src/Plot-Angle-Alpha_intermediateGamma.py b/src/Plot-Angle-Alpha_intermediateGamma.py
index c070ed4c1678b30a95547ae37cade0a85cfd2c42..fa69e157f32dcd0e75060e008f8040961678ed3a 100644
--- a/src/Plot-Angle-Alpha_intermediateGamma.py
+++ b/src/Plot-Angle-Alpha_intermediateGamma.py
@@ -195,8 +195,8 @@ gamma = 0.75
# gamma = 3.0
Gamma_Values = [0.5, 0.75, 1.5, 3.0]
-Gamma_Values = [ 1.5, 3.0]
-# Gamma_Values = [3.0]
+# Gamma_Values = [ 1.5, 3.0]
+Gamma_Values = [3.0]
# Gamma_Values = ['infinity']
print('(Input) Gamma_Values:', Gamma_Values)
# #
@@ -230,6 +230,7 @@ for gamma in Gamma_Values:
numPoints = 2000
numPoints = 300
+ numPoints = 30
X_Values = np.linspace(xmin, xmax, num=numPoints)
print(X_Values)
@@ -476,7 +477,11 @@ for gamma in Gamma_Values:
# ax = plt.axes((0.15,0.18,0.6,0.6))
# ax = plt.axes((0.15,0.2,0.75,0.75))
# ax = plt.axes((0.18,0.2,0.75,0.75))
- ax = plt.axes((0.28,0.3,0.65,0.65))
+
+
+ # ax = plt.axes((0.28,0.3,0.65,0.65)) # This one!
+
+ ax = plt.axes((0.25,0.25,0.6,0.6))
# ax = plt.axes((0.1,0.1,0.5,0.8))
# ax = plt.axes((0.1,0.1,1,1))
# ax = plt.axes()
@@ -587,8 +592,12 @@ for gamma in Gamma_Values:
# --- leave out jumps:
# ax.scatter(X_Values, Y_Values)
- ax.set_xlabel(r"prestrain ratio $\theta_\rho$")
- ax.set_ylabel(r"angle $\alpha$")
+ # ax.set_xlabel(r"prestrain ratio $\theta_\rho$",labelpad=0)
+ ax.set_xlabel(r"$\theta_\rho$",labelpad=0)
+ ax.set_ylabel(r"$\alpha$")
+ # ax.set_ylabel(r"angle $\alpha$")
+
+ ax.set_title(r"$\gamma = \ $"+str(gamma), fontsize=10)
if Jumps:
@@ -782,6 +791,7 @@ for gamma in Gamma_Values:
# l3 = ax.scatter(X_Values,Angle_Theta025,color='orangered', s=2 ,zorder=3, label=r"$\theta = 0.25$")
# l4 = ax.plot(X_Values,Angle_alphaNeg065, linewidth=1.5 ,linestyle = '--' ,zorder=3, label=r"$\theta_\rho=-0.65$")
l5 = ax.scatter(X_Values,Angle_Theta05, color='royalblue', s=0.15 ,zorder=3, label=r"$\theta = 0.5$")
+ # l5 = ax.scatter(X_Values,Angle_Theta05, color='royalblue' ,zorder=3, label=r"$\theta = 0.5$")
# l6 = ax.plot(X_Values,Angle_alphaNeg075, linewidth=1.5,linestyle = '--' ,zorder=3, label=r"$\theta_\rho=-0.75$")
# l7 = ax.scatter(X_Values,Angle_Theta075, s=2, zorder=3, label=r"$\theta = 0.75$")
# l8 = ax.plot(X_Values,Angle_alphaNeg085, linewidth=1.5,linestyle = '--' , zorder=3, label=r"$\theta_\rho=-0.85$")
@@ -818,6 +828,8 @@ for gamma in Gamma_Values:
labels = ['$0$',r'$\pi/8$', r'$\pi/4$' ,r'$3\pi/8$' , r'$\pi/2$',r'$5\pi/8$']
ax.set_yticklabels(labels)
+
+
# ax.legend(handles=[l1,l2,l3,l4, l5, l6, l7, l8],
# labels= [r"$\theta_\rho = -1.0$", r"$\theta_\rho = - \frac{7}{8}$", r"$\theta_\rho = -\frac{3}{4}$" , r"$\theta_\rho = - \frac{5}{8}$", r"$\theta_\rho = - \frac{1}{2} $" , r"$\theta_\rho = - \frac{1}{4}$", r"$\theta_\rho = - \frac{1}{8}$" , r"$\theta_\rho = 0$"],
# loc='upper left',
diff --git a/src/Plot-Angle-GammaV2_SubPlots.py b/src/Plot-Angle-GammaV2_SubPlots.py
index 35ba8cf1540ff290cd244ab2065bbf89093ecd4e..f0513528ba657dda70c811b61d685426454df93e 100644
--- a/src/Plot-Angle-GammaV2_SubPlots.py
+++ b/src/Plot-Angle-GammaV2_SubPlots.py
@@ -143,12 +143,18 @@ alpha_1 = -1.0
alpha_2 = -0.75
alpha_3 = -0.70
+# alpha_1 = -1
+# alpha_2 = -0.5
+# alpha_3 = -0.25
+
angles_1 = []
angles_2 = []
angles_3 = []
beta = 2.0
theta= 0.25
+# beta = 10.0
+# theta= 0.5
@@ -168,7 +174,8 @@ print('----------------------------')
gamma_min = 0.01
gamma_max = 1.5
-Gamma_Values = np.linspace(gamma_min, gamma_max, num=100) # TODO variable Input Parameters...alpha,beta...
+# Gamma_Values = np.linspace(gamma_min, gamma_max, num=100) # TODO variable Input Parameters...alpha,beta...
+Gamma_Values = np.linspace(gamma_min, gamma_max, num=40) # TODO variable Input Parameters...alpha,beta...
print('(Input) Gamma_Values:', Gamma_Values)
# mu_gamma = []
diff --git a/src/Plot-Curvature-Alpha_intermediateGamma.py b/src/Plot-Curvature-Alpha_intermediateGamma.py
new file mode 100644
index 0000000000000000000000000000000000000000..b7e0f3e462997575646c33ab18c89dd32207e7b5
--- /dev/null
+++ b/src/Plot-Curvature-Alpha_intermediateGamma.py
@@ -0,0 +1,877 @@
+import numpy as np
+import matplotlib.pyplot as plt
+import sympy as sym
+import math
+import os
+import subprocess
+import fileinput
+import re
+import matlab.engine
+from HelperFunctions import *
+from ClassifyMin import *
+
+import matplotlib.ticker as tickers
+import matplotlib as mpl
+from matplotlib.ticker import MultipleLocator,FormatStrFormatter,MaxNLocator
+import pandas as pd
+
+# import tikzplotlib
+# # from pylab import *
+# from tikzplotlib import save as tikz_save
+
+
+# Needed ?
+mpl.use('pdf')
+
+# from subprocess import Popen, PIPE
+#import sys
+
+###################### makePlot.py #########################
+# Generalized Plot-Script giving the option to define
+# quantity of interest and the parameter it depends on
+# to create a plot
+#
+# Input: Define y & x for "x-y plot" as Strings
+# - Run the 'Cell-Problem' for the different Parameter-Points
+# (alternatively run 'Compute_MuGamma' if quantity of interest
+# is q3=muGamma for a significant Speedup)
+
+###########################################################
+
+
+
+# figsize argument takes inputs in inches
+# and we have the width of our document in pts.
+# To set the figure size we construct a function
+# to convert from pts to inches and to determine
+# an aesthetic figure height using the golden ratio:
+# def set_size(width, fraction=1):
+# """Set figure dimensions to avoid scaling in LaTeX.
+#
+# Parameters
+# ----------
+# width: float
+# Document textwidth or columnwidth in pts
+# fraction: float, optional
+# Fraction of the width which you wish the figure to occupy
+#
+# Returns
+# -------
+# fig_dim: tuple
+# Dimensions of figure in inches
+# """
+# # Width of figure (in pts)
+# fig_width_pt = width * fraction
+#
+# # Convert from pt to inches
+# inches_per_pt = 1 / 72.27
+#
+# # Golden ratio to set aesthetic figure height
+# # https://disq.us/p/2940ij3
+# golden_ratio = (5**.5 - 1) / 2
+#
+# # Figure width in inches
+# fig_width_in = fig_width_pt * inches_per_pt
+# # Figure height in inches
+# fig_height_in = fig_width_in * golden_ratio
+#
+# fig_dim = (fig_width_in, fig_height_in)
+#
+# return fig_dim
+#
+
+
+
+def format_func(value, tick_number):
+ # # find number of multiples of pi/2
+ # N = int(np.round(2 * value / np.pi))
+ # if N == 0:
+ # return "0"
+ # elif N == 1:
+ # return r"$\pi/2$"
+ # elif N == 2:
+ # return r"$\pi$"
+ # elif N % 2 > 0:
+ # return r"${0}\pi/2$".format(N)
+ # else:
+ # return r"${0}\pi$".format(N // 2)
+ # find number of multiples of pi/2
+ N = int(np.round(4 * value / np.pi))
+ if N == 0:
+ return "0"
+ elif N == 1:
+ return r"$\pi/4$"
+ elif N == 2:
+ return r"$\pi/2$"
+ elif N % 2 > 0:
+ return r"${0}\pi/2$".format(N)
+ else:
+ return r"${0}\pi$".format(N // 2)
+
+
+
+
+
+def find_nearest(array, value):
+ array = np.asarray(array)
+ idx = (np.abs(array - value)).argmin()
+ return array[idx]
+
+
+def find_nearestIdx(array, value):
+ array = np.asarray(array)
+ idx = (np.abs(array - value)).argmin()
+ return idx
+
+
+
+# TODO
+# - Fallunterscheidung (Speedup) falls gesuchter value mu_gamma = q3
+# - Also Add option to plot Minimization Output
+
+
+# ----- Setup Paths -----
+# InputFile = "/inputs/cellsolver.parset"
+# OutputFile = "/outputs/output.txt"
+
+InputFile = "/inputs/computeMuGamma.parset"
+OutputFile = "/outputs/outputMuGamma.txt"
+
+# path = os.getcwd()
+# InputFilePath = os.getcwd()+InputFile
+# OutputFilePath = os.getcwd()+OutputFile
+# --------- Run from src folder:
+path_parent = os.path.dirname(os.getcwd())
+os.chdir(path_parent)
+path = os.getcwd()
+print(path)
+InputFilePath = os.getcwd()+InputFile
+OutputFilePath = os.getcwd()+OutputFile
+print("InputFilepath: ", InputFilePath)
+print("OutputFilepath: ", OutputFilePath)
+print("Path: ", path)
+
+#---------------------------------------------------------------
+
+print('---- Input parameters: -----')
+mu1 = 1.0 #10.0
+# lambda1 = 10.0
+rho1 = 1.0
+# alpha = 5.0
+# beta = 10.0
+# alpha = 2.0
+# beta = 2.0
+# theta = 1.0/8.0 #1.0/4.0
+
+lambda1 = 0.0
+# gamma = 1.0/4.0
+
+# TEST:
+# alpha=3.0;
+
+
+
+
+# # INTERESTING!:
+# alpha = 3
+beta = 2.0
+# theta= 1/8
+
+
+
+
+#TEST
+# beta=2
+
+
+
+gamma = 'infinity' #Elliptic Setting
+gamma = '0' #Hyperbolic Setting
+# gamma = 0.01
+# # gamma= 3.0
+gamma = 0.5
+gamma = 0.75
+# # gamma = 100.0
+# gamma = 3.0
+
+Gamma_Values = [0.5, 0.75, 1.5, 3.0]
+# Gamma_Values = [ 1.5, 3.0]
+# Gamma_Values = [3.0]
+# Gamma_Values = ['infinity']
+print('(Input) Gamma_Values:', Gamma_Values)
+# #
+for gamma in Gamma_Values:
+
+ print('mu1: ', mu1)
+ print('rho1: ', rho1)
+ # print('alpha: ', alpha)
+ print('beta: ', beta)
+ # print('theta: ', theta)
+ print('gamma:', gamma)
+ print('----------------------------')
+
+
+
+ # --- define Interval of x-va1ues:
+ xmin = -2.0
+ # xmax = 0.41
+ xmax = 3.0
+
+
+ xmin = -1.5
+ xmax = 2.0
+
+ xmin = -1.0
+ xmax = -0.5
+
+
+ Jumps = False
+
+
+ numPoints = 2000
+ numPoints = 300
+ numPoints = 30
+ numPoints = 100
+ X_Values = np.linspace(xmin, xmax, num=numPoints)
+ print(X_Values)
+
+
+ Y_Values = []
+
+
+
+
+
+ Curvature_Theta01 = []
+ Curvature_Theta025 = []
+ Curvature_Theta05 = []
+
+ Curvature_Theta075 = []
+ Curvature_Theta09 = []
+
+
+
+
+
+
+ for alpha in X_Values:
+ print('Situation of Lemma1.4')
+ q12 = 0.0
+ # q1 = (1.0/6.0)*harmonicMean(mu1, beta, theta)
+ # q2 = (1.0/6.0)*arithmeticMean(mu1, beta, theta)
+ # b1 = prestrain_b1(rho1, beta, alpha,theta)
+ # b2 = prestrain_b2(rho1, beta, alpha,theta)
+ # b3 = 0.0
+ q3_Theta01 = GetMuGamma(beta,0.1,gamma,mu1,rho1,InputFilePath ,OutputFilePath)
+ q3_Theta025 = GetMuGamma(beta,0.25,gamma,mu1,rho1,InputFilePath ,OutputFilePath)
+ q3_Theta05 = GetMuGamma(beta,0.5,gamma,mu1,rho1,InputFilePath ,OutputFilePath)
+ q3_Theta075 = GetMuGamma(beta,0.75,gamma,mu1,rho1,InputFilePath ,OutputFilePath)
+ q3_Theta09 = GetMuGamma(beta,0.9,gamma,mu1,rho1,InputFilePath ,OutputFilePath)
+
+
+ G, angle, Type, curvature = classifyMin_ana(alpha,beta,0.1, q3_Theta01, mu1, rho1)
+ Curvature_Theta01.append(curvature)
+
+ G, angle, Type, curvature = classifyMin_ana(alpha,beta,0.25, q3_Theta025, mu1, rho1)
+ Curvature_Theta025.append(curvature)
+
+ G, angle, Type, curvature = classifyMin_ana(alpha,beta,0.5, q3_Theta05, mu1, rho1)
+ Curvature_Theta05.append(curvature)
+
+ G, angle, Type, curvature = classifyMin_ana(alpha,beta,0.75, q3_Theta075, mu1, rho1)
+ Curvature_Theta075.append(curvature)
+
+ G, angle, Type, curvature = classifyMin_ana(alpha,beta,0.9, q3_Theta09, mu1, rho1)
+ Curvature_Theta09.append(curvature)
+
+
+
+
+ #
+ # G, angle, Type, curvature = classifyMin_ana(-0.5,beta,theta, q3, mu1, rho1)
+ # Angle_alphaNeg05 .append(angle)
+ # G, angle, Type, curvature = classifyMin_ana(-0.25,beta,theta, q3, mu1, rho1)
+ # Angle_alphaNeg025.append(angle)
+ # G, angle, Type, curvature = classifyMin_ana(3.0,beta,theta, q3, mu1, rho1)
+ # Angle_alpha3.append(angle)
+ # G, angle, Type, curvature = classifyMin_ana(-1.0,beta,theta, q3, mu1, rho1)
+ # Angle_alphaNeg075.append(angle)
+ # G, angle, Type, curvature = classifyMin_ana(0,beta,theta, q3, mu1, rho1)
+ # Angle_alpha0.append(angle)
+ # # G, angle, Type, curvature = classifyMin_ana(-0.125,beta,theta, q3, mu1, rho1)
+ # # Angle_alphaNeg0125.append(angle)
+ # G, angle, Type, curvature = classifyMin_ana(-0.7,beta,theta, q3, mu1, rho1)
+ # Angle_alphaNeg0125.append(angle)
+ #
+ # G, angle, Type, curvature = classifyMin_ana(-0.625,beta,theta, q3, mu1, rho1)
+ # Angle_alphaNeg0625.append(angle)
+ # G, angle, Type, curvature = classifyMin_ana(-0.875,beta,theta, q3, mu1, rho1)
+ # Angle_alphaNeg0875.append(angle)
+
+ #
+ #
+ # print("(Output) Values of angle: ", Y_Values)
+ #
+ #
+ # idx = find_nearestIdx(Y_Values, 0)
+ # print(' Idx of value closest to 0', idx)
+ # ValueClose = Y_Values[idx]
+ # print('GammaValue(Idx) with mu_gamma closest to q_3^*', ValueClose)
+ #
+ #
+ #
+ # # Find Indices where the difference between the next one is larger than epsilon...
+ # jump_idx = []
+ # jump_xValues = []
+ # jump_yValues = []
+ # tmp = X_Values[0]
+ # for idx, x in enumerate(X_Values):
+ # print(idx, x)
+ # if idx > 0:
+ # if abs(Y_Values[idx]-Y_Values[idx-1]) > 1:
+ # print('jump candidate')
+ # jump_idx.append(idx)
+ # jump_xValues.append(x)
+ # jump_yValues.append(Y_Values[idx])
+ #
+ #
+ #
+ #
+ #
+ #
+ #
+ # print("Jump Indices", jump_idx)
+ # print("Jump X-values:", jump_xValues)
+ # print("Jump Y-values:", jump_yValues)
+ #
+ # y_plotValues = [Y_Values[0]]
+ # x_plotValues = [X_Values[0]]
+ # # y_plotValues.extend(jump_yValues)
+ # for i in jump_idx:
+ # y_plotValues.extend([Y_Values[i-1], Y_Values[i]])
+ # x_plotValues.extend([X_Values[i-1], X_Values[i]])
+ #
+ #
+ # y_plotValues.append(Y_Values[-1])
+ # # x_plotValues = [X_Values[0]]
+ # # x_plotValues.extend(jump_xValues)
+ # x_plotValues.append(X_Values[-1])
+ #
+ #
+ # print("y_plotValues:", y_plotValues)
+ # print("x_plotValues:", x_plotValues)
+
+
+ # Y_Values[np.diff(y) >= 0.5] = np.nan
+
+
+ #get values bigger than jump position
+ # gamma = infty
+ # x_rest = X_Values[X_Values>x_plotValues[1]]
+ # Y_Values = np.array(Y_Values) #convert the np array
+ # y_rest = Y_Values[X_Values>x_plotValues[1]]
+ #
+ #
+ # # gamma = 0
+ # x_rest = X_Values[X_Values>x_plotValues[3]]
+ # Y_Values = np.array(Y_Values) #convert the np array
+ # y_rest = Y_Values[X_Values>x_plotValues[3]]
+
+ # gamma between
+ # Y_Values = np.array(Y_Values) #convert the np array
+ # X_Values = np.array(X_Values) #convert the np array
+ #
+ # x_one = X_Values[X_Values>x_plotValues[3]]
+ # # ax.scatter(X_Values, Y_Values)
+ # y_rest = Y_Values[X_Values>x_plotValues[3]]
+ # ax.plot(X_Values[X_Values>0.135], Y_Values[X_Values<0.135])
+ #
+ #
+ #
+
+
+ # y_rest = Y_Values[np.nonzero(X_Values>x_plotValues[1]]
+ # print('X_Values:', X_Values)
+ # print('Y_Values:', Y_Values)
+ # print('x_rest:', x_rest)
+ # print('y_rest:', y_rest)
+ # print('np.nonzero(X_Values>x_plotValues[1]', np.nonzero(X_Values>x_plotValues[1]) )
+
+
+
+
+ # --- Convert to numpy array
+ Y_Values = np.array(Y_Values)
+ X_Values = np.array(X_Values)
+
+ Curvature_Theta01 = np.array(Curvature_Theta01)
+ Curvature_Theta025 = np.array(Curvature_Theta025)
+
+ Curvature_Theta05 = np.array(Curvature_Theta05)
+
+ Curvature_Theta075 = np.array(Curvature_Theta075)
+ Curvature_Theta09 = np.array(Curvature_Theta09)
+ # ---------------- Create Plot -------------------
+
+ #--- change plot style: SEABORN
+ # plt.style.use("seaborn-paper")
+
+
+ #--- Adjust gobal matplotlib variables
+ # mpl.rcParams['pdf.fonttype'] = 42
+ # mpl.rcParams['ps.fonttype'] = 42
+ mpl.rcParams['text.usetex'] = True
+ mpl.rcParams["font.family"] = "serif"
+ mpl.rcParams["font.size"] = "9"
+
+
+ # plt.rc('font', family='serif', serif='Times')
+ # plt.rc('font', family='serif')
+ # # plt.rc('text', usetex=True) #also works...
+ # plt.rc('xtick', labelsize=8)
+ # plt.rc('ytick', labelsize=8)
+ # plt.rc('axes', labelsize=8)
+
+
+
+
+
+ #---- Scale Figure apropriately to fit tex-File Width
+ # width = 452.9679
+
+ # width as measured in inkscape
+ width = 6.28 *0.5
+ width = 6.28 *0.333
+ # width = 6.28
+ height = width / 1.618
+
+ #setup canvas first
+ fig = plt.figure() #main
+ # fig, ax = plt.subplots()
+ # fig, (ax, ax2) = plt.subplots(ncols=2)
+ # fig,axes = plt.subplots(nrows=1,ncols=2,figsize=(width,height)) # more than one plot
+
+
+ # fig.subplots_adjust(left=.15, bottom=.16, right=.99, top=.97) #TEST
+
+
+ # TEST
+ # mpl.rcParams['figure.figsize'] = (width+0.1,height+0.1)
+ # fig = plt.figure(figsize=(width+0.1,height+0.1))
+
+
+ # mpl.rcParams['figure.figsize'] = (width,height)
+ # fig = plt.figure(figsize=(10,6)) # default is [6.4,4.8] 6.4 is the width, 4.8 is the height
+ # fig = plt.figure(figsize=(width,height)) # default is [6.4,4.8] 6.4 is the width, 4.8 is the height
+ # fig = plt.figure(figsize=set_size(width))
+ # fig = plt.subplots(1, 1, figsize=set_size(width))
+
+ # --- To create a figure half the width of your document:#
+ # fig = plt.figure(figsize=set_size(width, fraction=0.5))
+
+
+
+ #--- You must select the correct size of the plot in advance
+ # fig.set_size_inches(3.54,3.54)
+
+ # ax = plt.axes((0.15,0.18,0.8,0.8))
+ # ax = plt.axes((0.15,0.18,0.6,0.6))
+ # ax = plt.axes((0.15,0.2,0.75,0.75))
+ # ax = plt.axes((0.18,0.2,0.75,0.75))
+
+
+ # ax = plt.axes((0.28,0.3,0.65,0.65)) # This one!
+
+ ax = plt.axes((0.25,0.25,0.6,0.6))
+ # ax = plt.axes((0.1,0.1,0.5,0.8))
+ # ax = plt.axes((0.1,0.1,1,1))
+ # ax = plt.axes()
+
+ # ax.spines['right'].set_visible(False)
+ # ax.spines['left'].set_visible(False)
+ # ax.spines['bottom'].set_visible(False)
+ # ax.spines['top'].set_visible(False)
+ # ax.tick_params(axis='x',which='major',direction='out',length=10,width=5,color='red',pad=15,labelsize=15,labelcolor='green',
+ # labelrotation=15)
+ # ax.tick_params(axis='x',which='major', direction='out',pad=5,labelsize=10)
+ # ax.tick_params(axis='y',which='major', length=5, width=1, direction='out',pad=5,labelsize=10)
+ ax.tick_params(axis='x',which='major', direction='out',pad=3)
+ ax.tick_params(axis='y',which='major', length=3, width=1, direction='out',pad=3)
+ # ax.xaxis.set_major_locator(MultipleLocator(0.05))
+ # ax.xaxis.set_minor_locator(MultipleLocator(0.025))
+ # ax.xaxis.set_major_locator(MultipleLocator(0.1))
+ # ax.xaxis.set_minor_locator(MultipleLocator(0.05))
+ ax.xaxis.set_major_locator(MultipleLocator(0.25))
+ ax.xaxis.set_minor_locator(MultipleLocator(0.125))
+ # ax.xaxis.set_major_locator(MultipleLocator(0.5))
+ # ax.xaxis.set_minor_locator(MultipleLocator(0.25))
+ #---- print data-types
+ print(ax.xaxis.get_major_locator())
+ print(ax.xaxis.get_minor_locator())
+ print(ax.xaxis.get_major_formatter())
+ print(ax.xaxis.get_minor_formatter())
+
+ #---- Hide Ticks or Labels
+ # ax.yaxis.set_major_locator(plt.NullLocator())
+ # ax.xaxis.set_major_formatter(plt.NullFormatter())
+
+ #---- Reducing or Increasing the Number of Ticks
+ # ax.xaxis.set_major_locator(plt.MaxNLocator(3))
+ # ax.yaxis.set_major_locator(plt.MaxNLocator(3))
+
+
+ #----- Fancy Tick Formats
+ # ax.yaxis.set_major_locator(plt.MultipleLocator(np.pi / 4))
+ # ax.yaxis.set_minor_locator(plt.MultipleLocator(np.pi / 12))
+ # ax.yaxis.set_major_formatter(plt.FuncFormatter(format_func))
+
+
+
+
+
+
+
+ # --- manually change ticks&labels:
+ # ax.set_xticks([0.2,1])
+ # ax.set_xticklabels(['pos1','pos2'])
+
+ # ax.set_yticks([0, np.pi/8, np.pi/4 ])
+ # labels = ['$0$',r'$\pi/8$', r'$\pi/4$']
+ # ax.set_yticklabels(labels)
+
+ a=ax.yaxis.get_major_locator()
+ b=ax.yaxis.get_major_formatter()
+ c = ax.get_xticks()
+ d = ax.get_xticklabels()
+ print('xticks:',c)
+ print('xticklabels:',d)
+
+ ax.grid(True,which='major',axis='both',alpha=0.3)
+
+
+
+
+
+
+ # plt.figure()
+
+ # f,ax=plt.subplots(1)
+
+ # plt.title(r''+ yName + '-Plot')
+ # plt.plot(X_Values, Y_Values,linewidth=2, '.k')
+ # plt.plot(X_Values, Y_Values,'.k',markersize=1)
+ # plt.plot(X_Values, Y_Values,'.',markersize=0.8)
+
+ # plt.plot(X_Values, Y_Values)
+
+ # ax.plot([[0],X_Values[-1]], [Y_Values[0],Y_Values[-1]])
+
+
+
+ # Gamma = '0'
+ # ax.plot([x_plotValues[0],x_plotValues[1]], [y_plotValues[0],y_plotValues[1]] , 'b')
+ #
+ # ax.plot([x_plotValues[1],x_plotValues[3]], [y_plotValues[2],y_plotValues[3]] , 'b')
+ #
+ # ax.plot(x_rest, y_rest, 'b')
+
+
+ # Gamma between
+
+ # x jump values (gamma 0): [0.13606060606060608, 0.21090909090909093]
+
+ # ax.plot([[0,jump_xValues[0]], [0, 0]] , 'b')
+ # ax.plot([jump_xValues[0],xmin], [y_plotValues[2],y_plotValues[2]] , 'b')
+
+ # ax.plot([[0,0.13606060606060608], [0, 0]] , 'b')
+ # ax.plot([[0.13606060606060608,xmin], [(math.pi/2),(math.pi/2)]], 'b')
+
+ # jump_xValues[0]
+
+
+
+ # --- leave out jumps:
+ # ax.scatter(X_Values, Y_Values)
+
+ # ax.set_xlabel(r"prestrain ratio $\theta_\rho$",labelpad=0)
+ ax.set_xlabel(r"$\theta_\rho$",labelpad=0)
+ ax.set_ylabel(r"$\kappa$")
+ # ax.set_ylabel(r"angle $\alpha$")
+
+ ax.set_title(r"$\gamma = \ $"+str(gamma), fontsize=10)
+
+
+ if Jumps:
+
+ # --- leave out jumps:
+ if gamma == 'infinity':
+ ax.plot(X_Values[X_Values>=jump_xValues[0]], Y_Values[X_Values>=jump_xValues[0]] , 'forestgreen')
+ ax.plot(X_Values[X_Values<jump_xValues[0]], Y_Values[X_Values<jump_xValues[0]], 'forestgreen')
+
+
+
+ # ax.plot(X_Values[X_Values>=jump_xValues[0]], Y_Values[X_Values>=jump_xValues[0]])
+ # ax.plot(X_Values[X_Values<jump_xValues[0]], Y_Values[X_Values<jump_xValues[0]])
+
+
+
+
+ # ax.plot(X_Values[X_Values>0.136], Y_Values[X_Values>0.136])
+ # ax.plot(X_Values[X_Values<0.135], Y_Values[X_Values<0.135])
+ # ax.scatter(X_Values, Y_Values)
+ # ax.plot(X_Values, Y_Values)
+
+ # plt.plot(x_plotValues, y_plotValues,'.')
+ # plt.scatter(X_Values, Y_Values, alpha=0.3)
+ # plt.scatter(X_Values, Y_Values)
+ # plt.plot(X_Values, Y_Values,'.')
+ # plt.plot([X_Values[0],X_Values[-1]], [Y_Values[0],Y_Values[-1]])
+ # plt.axis([0, 6, 0, 20])
+
+ # ax.set_xlabel(r"volume fraction $\theta$", size=11)
+ # ax.set_ylabel(r"angle $\angle$", size=11)
+ # ax.set_xlabel(r"volume fraction $\theta$")
+ # # ax.set_ylabel(r"angle $\angle$")
+ # ax.set_ylabel(r"angle $\alpha$")
+ # plt.ylabel('$\kappa$')
+
+ # ax.yaxis.set_major_formatter(ticker.FormatStrFormatter('%g $\pi$'))
+ # ax.yaxis.set_major_locator(ticker.MultipleLocator(base=0.1))
+
+
+
+
+ # Plot every other line.. not the jumps...
+
+ if gamma == '0':
+ tmp = 1
+ for idx, x in enumerate(x_plotValues):
+ if idx > 0 and tmp == 1:
+ # plt.plot([x_plotValues[idx-1],x_plotValues[idx]] ,[y_plotValues[idx-1],y_plotValues[idx]] )
+ ax.plot([x_plotValues[idx-1],x_plotValues[idx]] ,[y_plotValues[idx-1],y_plotValues[idx]], 'forestgreen', zorder=2)
+ tmp = 0
+ else:
+ tmp = 1
+
+ # plt.plot([x_plotValues[0],x_plotValues[1]] ,[y_plotValues[0],y_plotValues[1]] )
+ # plt.plot([x_plotValues[2],x_plotValues[3]] ,[y_plotValues[2],y_plotValues[3]] )
+ # plt.plot([x_plotValues[4],x_plotValues[5]] ,[y_plotValues[4],y_plotValues[5]] )
+ # plt.plot([x_plotValues[6],x_plotValues[7]] ,[y_plotValues[6],y_plotValues[7]] )
+
+
+ for x in jump_xValues:
+ plt.axvline(x,ymin=0, ymax= 1, color = 'orange',alpha=0.5, linestyle = 'dashed', linewidth=1, zorder=1)
+ # plt.axvline(x,ymin=0, ymax= 1, color = 'orange',alpha=0.5, linestyle = 'dashed', label=r'$\theta_*$')
+
+ # plt.axvline(x_plotValues[1],ymin=0, ymax= 1, color = 'g',alpha=0.5, linestyle = 'dashed')
+
+ # plt.axhline(y = 1.90476, color = 'b', linestyle = ':', label='$q_1$')
+ # plt.axhline(y = 2.08333, color = 'r', linestyle = 'dashed', label='$q_2$')
+ # plt.legend()
+
+
+ # -- SETUP LEGEND
+ # ax.legend(prop={'size': 11})
+ # ax.legend()
+
+ # ------------------ SAVE FIGURE
+ # tikzplotlib.save("TesTout.tex")
+ # plt.close()
+ # mpl.rcParams.update(mpl.rcParamsDefault)
+
+ # plt.savefig("graph.pdf",
+ # #This is simple recomendation for publication plots
+ # dpi=1000,
+ # # Plot will be occupy a maximum of available space
+ # bbox_inches='tight',
+ # )
+ # plt.savefig("graph.pdf")
+
+
+
+ # ---- ADD additional scatter:
+ # ax.scatter(X_Values,Y_Values,s=1,c='black',zorder=4)
+
+ # Find transition point
+ lastIdx = len(Y_Values)-1
+
+ for idx, y in enumerate(Y_Values):
+ if idx != lastIdx:
+ if abs(y-0) < 0.01 and abs(Y_Values[idx+1] - 0) > 0.05:
+ transition_point1 = X_Values[idx+1]
+ print('transition point1:', transition_point1 )
+ if abs(y-0.5*np.pi) < 0.01 and abs(Y_Values[idx+1] -0.5*np.pi)>0.01:
+ transition_point2 = X_Values[idx]
+ print('transition point2:', transition_point2 )
+ if abs(y-0) > 0.01 and abs(Y_Values[idx+1] - 0) < 0.01:
+ transition_point3 = X_Values[idx+1]
+ print('transition point3:', transition_point3 )
+
+ # Add transition Points:
+ if gamma == '0':
+ ax.scatter([transition_point1, transition_point2],[np.pi/2,np.pi/2],s=6, marker='o', cmap=None, norm=None, facecolor = 'black',
+ edgecolor = 'black', vmin=None, vmax=None, alpha=None, linewidths=None, zorder=3)
+
+ ax.text(transition_point1-0.02 , np.pi/2-0.02, r"$1$", size=6, bbox=dict(boxstyle="circle",facecolor='white', alpha=1.0, pad=0.1, linewidth=0.5)
+ )
+
+ ax.text(transition_point2+0.012 , np.pi/2-0.02, r"$2$", size=6, bbox=dict(boxstyle="circle",facecolor='white', alpha=1.0, pad=0.1, linewidth=0.5)
+ )
+ else:
+ ax.scatter([transition_point1, transition_point2, transition_point3 ],[np.pi/2,np.pi/2,0 ],s=6, marker='o', cmap=None, norm=None, facecolor = 'black',
+ edgecolor = 'black', vmin=None, vmax=None, alpha=None, linewidths=None, zorder=3)
+
+ ax.text(transition_point1-0.02 , np.pi/2-0.02, r"$1$", size=6, bbox=dict(boxstyle="circle",facecolor='white', alpha=1.0, pad=0.1, linewidth=0.5)
+ )
+
+ ax.text(transition_point2 +0.011 , np.pi/2-0.02, r"$2$", size=6, bbox=dict(boxstyle="circle",facecolor='white', alpha=1.0, pad=0.1, linewidth=0.5)
+ )
+
+ ax.text(transition_point3 +0.009 , 0+0.08, r"$3$", size=6, bbox=dict(boxstyle="circle",facecolor='white', alpha=1.0, pad=0.1, linewidth=0.5)
+ )
+
+ else:
+ # ax.scatter(X_Values,Y_Values,s=1, marker='o', cmap=None, norm=None, facecolor = 'blue',
+ # edgecolor = 'none', vmin=None, vmax=None, alpha=None, linewidths=None, zorder=3)
+ # ---------------------------------------------------------------
+ # l1 = ax.scatter(X_Values,Angle_alpha0,s=1, marker='o', edgecolor = 'black',cmap=None, norm=None, vmin=None, vmax=None, alpha=0.75, linewidths=None, zorder=4)
+ # l6 = ax.scatter(X_Values,Angle_alphaNeg1,s=2, marker='s', cmap=None, norm=None, vmin=None, vmax=None, alpha=None, linewidths=None, zorder=1, label=r"$\theta_\rho = -1.0$")
+ # l4 = ax.scatter(X_Values,Angle_alphaNeg05,s=1, marker='o', cmap=None, norm=None, vmin=None, vmax=None, alpha=None, linewidths=None, zorder=3)
+ # l3 = ax.scatter(X_Values,Angle_alphaNeg025,s=1, marker='o', cmap=None, norm=None, vmin=None, vmax=None, alpha=None, linewidths=None, zorder=3)
+ # l7 = ax.scatter(X_Values,Angle_alpha3,s=1, marker='o', facecolor = 'none',edgecolor = 'forestgreen', cmap=None, norm=None, vmin=None, vmax=None, alpha=1.0, linewidths=None, zorder=5)
+ # # l4 = ax.scatter(X_Values,Angle_alpha3,s=1, marker='o', markerfacecolor='red',markeredgecolor='black',markeredgewidth=2, cmap=None, norm=None, vmin=None, vmax=None, alpha=0.5, linewidths=None, zorder=3)
+ # l5 = ax.scatter(X_Values,Angle_alphaNeg075,s=1, marker='o', cmap=None, norm=None, vmin=None, vmax=None, alpha=None, linewidths=None, zorder=3)
+ # l2 = ax.scatter(X_Values,Angle_alphaNeg0125,s=1, marker='o', cmap=None, norm=None, vmin=None, vmax=None, alpha=None, linewidths=None, zorder=3)
+ #
+ # line_labels = [r"$\theta_\rho = -1.0$", r"$\theta_\rho = -0.5$", r"$\theta_\rho = -0.25$", r"$\theta_\rho = 3.0$"]
+ # ax.set_yticks([0, np.pi/8, np.pi/4, 3*np.pi/8 , np.pi/2, 5*np.pi/8 ])
+ # labels = ['$0$',r'$\pi/8$', r'$\pi/4$' ,r'$3\pi/8$' , r'$\pi/2$',r'$5\pi/8$']
+ # ax.set_yticklabels(labels)
+ #
+ # ax.legend(handles=[l1,l2,l3,l4, l5, l6, l7],
+ # labels= [ r"$\theta_\rho = 0$", r"$\theta_\rho = -0.125$", r"$\theta_\rho = -0.25$", r"$\theta_\rho = -0.5$", r"$\theta_\rho = -0.75$", r"$\theta_\rho = -1.0$", r"$\theta_\rho = 3.0$"],
+ # loc='upper left',
+ # bbox_to_anchor=(1,1))
+ # ---------------------------------------------------------------
+ # l1 = ax.scatter(X_Values,Angle_alphaNeg1,s=2, marker='s', cmap=None, norm=None, vmin=None, vmax=None, alpha=None, linewidths=None, zorder=1)
+ # l2 = ax.scatter(X_Values,Angle_alphaNeg0875,s=2, marker='o',cmap=None, norm=None, vmin=None, vmax=None, alpha=None, linewidths=None, zorder=4)
+ # l3 = ax.scatter(X_Values,Angle_alphaNeg075,s=2, marker='o', cmap=None, norm=None, vmin=None, vmax=None, alpha=None, linewidths=None, zorder=3)
+ # l4 = ax.scatter(X_Values,Angle_alphaNeg0625,s=2, marker='o',cmap=None, norm=None, vmin=None, vmax=None, alpha=None, linewidths=None, zorder=4)
+ # l5 = ax.scatter(X_Values,Angle_alphaNeg05,s=2, marker='o', cmap=None, norm=None, vmin=None, vmax=None, alpha=None, linewidths=None, zorder=3)
+ # l6 = ax.scatter(X_Values,Angle_alphaNeg025,s=2, marker='o', cmap=None, norm=None, vmin=None, vmax=None, alpha=None, linewidths=None, zorder=3)
+ # l7 = ax.scatter(X_Values,Angle_alphaNeg0125,s=2, marker='o', cmap=None, norm=None, vmin=None, vmax=None, alpha=None, linewidths=None, zorder=3)
+ # l8 = ax.scatter(X_Values,Angle_alpha0,s=2, marker='s', edgecolor = 'black', cmap=None, norm=None, vmin=None, vmax=None, alpha=None, linewidths=None, zorder=4)
+
+ # l1 = ax.plot(X_Values,Angle_alphaNeg05, color='blue', linewidth=1.5, zorder=3, label=r"$\theta_\rho=-0.5$")
+ # l2 = ax.plot(X_Values,Angle_alphaNeg055, linewidth=1.5, linestyle = '--', zorder=3,label=r"$\theta_\rho=-0.55$")
+ # l3 = ax.plot(X_Values,Angle_alphaNeg06,color='orangered', linewidth=1.5 ,linestyle = '--' ,zorder=3, label=r"$\theta_\rho=-0.6$")
+ # l4 = ax.plot(X_Values,Angle_alphaNeg065, linewidth=1.5 ,linestyle = '--' ,zorder=3, label=r"$\theta_\rho=-0.65$")
+ # l5 = ax.plot(X_Values,Angle_alphaNeg07,color='orange', linewidth=1.5 ,linestyle = '--' ,zorder=3, label=r"$\theta_\rho=-0.7$")
+ # l6 = ax.plot(X_Values,Angle_alphaNeg075, linewidth=1.5,linestyle = '--' ,zorder=3, label=r"$\theta_\rho=-0.75$")
+ # l7 = ax.plot(X_Values,Angle_alphaNeg08, linewidth=1.5,linestyle = '--' , zorder=3, label=r"$\theta_\rho=-0.8$")
+ # l8 = ax.plot(X_Values,Angle_alphaNeg085, linewidth=1.5,linestyle = '--' , zorder=3, label=r"$\theta_\rho=-0.85$")
+ # l9 = ax.plot(X_Values,Angle_alphaNeg09, color='teal',linestyle = '--', linewidth=1.5 , zorder=3, label=r"$\theta_\rho=-0.9$")
+ # l10 = ax.plot(X_Values,Angle_alphaNeg095, linewidth=1.5,linestyle = '--' , zorder=3, label=r"$\theta_\rho=-0.95$")
+ # l11 = ax.plot(X_Values,Angle_alphaNeg1, color='red', linewidth=1.5 ,zorder=1, label=r"$\theta_\rho=-1.0$")
+
+
+ # l1 = ax.plot(X_Values,Angle_Theta01, color='blue', linewidth=1.5, zorder=3, label=r"$\theta=0.1$")
+ # # l2 = ax.plot(X_Values,Angle_alphaNeg055, linewidth=1.5, linestyle = '--', zorder=3,label=r"$\theta_\rho=-0.55$")
+ # l3 = ax.plot(X_Values,Angle_Theta025,color='orangered', linewidth=1.5 ,zorder=3, label=r"$\theta = 0.25$")
+ # # l4 = ax.plot(X_Values,Angle_alphaNeg065, linewidth=1.5 ,linestyle = '--' ,zorder=3, label=r"$\theta_\rho=-0.65$")
+ # l5 = ax.plot(X_Values,Curvature_Theta05,color='orange', linewidth=1.5 ,zorder=3, label=r"$\theta = 0.5$")
+ # # l6 = ax.plot(X_Values,Curvature_alphaNeg075, linewidth=1.5,linestyle = '--' ,zorder=3, label=r"$\theta_\rho=-0.75$")
+ # l7 = ax.plot(X_Values,Curvature_Theta075, linewidth=1.5 , zorder=3, label=r"$\theta = 0.75$")
+ # # l8 = ax.plot(X_Values,Curvature_alphaNeg085, linewidth=1.5,linestyle = '--' , zorder=3, label=r"$\theta_\rho=-0.85$")
+ # l9 = ax.plot(X_Values,Curvature_Theta09, color='teal', linewidth=1.5 , zorder=3, label=r"$\theta =0.9$")
+ # # l10 = ax.plot(X_Values,Curvature_alphaNeg095, linewidth=1.5,linestyle = '--' , zorder=3, label=r"$\theta_\rho=-0.95$")
+
+
+ # l1 = ax.scatter(X_Values,Curvature_Theta01, color='blue', s=2, zorder=3, label=r"$\theta=0.1$")
+ # l2 = ax.plot(X_Values,Curvature_alphaNeg055, linewidth=1.5, linestyle = '--', zorder=3,label=r"$\theta_\rho=-0.55$")
+ # l3 = ax.scatter(X_Values,Curvature_Theta025,color='orangered', s=2 ,zorder=3, label=r"$\theta = 0.25$")
+ # l4 = ax.plot(X_Values,Curvature_alphaNeg065, linewidth=1.5 ,linestyle = '--' ,zorder=3, label=r"$\theta_\rho=-0.65$")
+ l5 = ax.scatter(X_Values,Curvature_Theta05, color='forestgreen', s=0.15 ,zorder=3, label=r"$\theta = 0.5$")
+ # l5 = ax.scatter(X_Values,Curvature_Theta05, color='forestgreen' ,zorder=3, label=r"$\theta = 0.5$")
+ # l6 = ax.plot(X_Values,Curvature_alphaNeg075, linewidth=1.5,linestyle = '--' ,zorder=3, label=r"$\theta_\rho=-0.75$")
+ # l7 = ax.scatter(X_Values,Curvature_Theta075, s=2, zorder=3, label=r"$\theta = 0.75$")
+ # l8 = ax.plot(X_Values,Curvature_alphaNeg085, linewidth=1.5,linestyle = '--' , zorder=3, label=r"$\theta_\rho=-0.85$")
+ # l9 = ax.scatter(X_Values,Curvature_Theta09, color='teal',s=2, zorder=3, alpha=1.0, label=r"$\theta =0.9$")
+
+ # ax.legend(handles=[l1[0],l2[0],l3[0],l4[0], l5[0], l6[0], l7[0], l8[0], l9[0], l10[0], l11[0]],
+ # # labels= [r"$\theta_\rho = -1.0$", r"$\theta_\rho = - \frac{7}{8}$", r"$\theta_\rho = -\frac{3}{4}$" , r"$\theta_\rho = - \frac{5}{8}$", r"$\theta_\rho = - \frac{1}{2} $" , r"$\theta_\rho = - \frac{1}{4}$", r"$\theta_\rho = - \frac{1}{8}$" , r"$\theta_\rho = 0$"],
+ # loc='upper left',
+ # bbox_to_anchor=(1,1))
+
+ # ax.legend(handles=[l1[0],l3[0], l5[0], l7[0], l9[0]] ,
+ # # labels= [r"$\theta_\rho = -1.0$", r"$\theta_\rho = - \frac{7}{8}$", r"$\theta_\rho = -\frac{3}{4}$" , r"$\theta_\rho = - \frac{5}{8}$", r"$\theta_\rho = - \frac{1}{2} $" , r"$\theta_\rho = - \frac{1}{4}$", r"$\theta_\rho = - \frac{1}{8}$" , r"$\theta_\rho = 0$"],
+ # loc='upper left',
+ # bbox_to_anchor=(1,1))
+
+ # ax.legend(handles=[l1,l3, l5, l7, l9] ,
+ # # labels= [r"$\theta_\rho = -1.0$", r"$\theta_\rho = - \frac{7}{8}$", r"$\theta_\rho = -\frac{3}{4}$" , r"$\theta_\rho = - \frac{5}{8}$", r"$\theta_\rho = - \frac{1}{2} $" , r"$\theta_\rho = - \frac{1}{4}$", r"$\theta_\rho = - \frac{1}{8}$" , r"$\theta_\rho = 0$"],
+ # loc='upper left',
+ # bbox_to_anchor=(1,1))
+
+ # ax.legend(handles=[l5] ,
+ # # labels= [r"$\theta_\rho = -1.0$", r"$\theta_\rho = - \frac{7}{8}$", r"$\theta_\rho = -\frac{3}{4}$" , r"$\theta_\rho = - \frac{5}{8}$", r"$\theta_\rho = - \frac{1}{2} $" , r"$\theta_\rho = - \frac{1}{4}$", r"$\theta_\rho = - \frac{1}{8}$" , r"$\theta_\rho = 0$"],
+ # loc='upper left',
+ # bbox_to_anchor=(1,1))
+
+ # ax.plot(X_Values, Y_Values, marker='o', markerfacecolor='orange', markeredgecolor='black', markeredgewidth=1, linewidth=1, zorder=3)
+ # l7 = ax.scatter(X_Values,Curvature_alpha3,s=1, marker='o', facecolor = 'none',edgecolor = 'forestgreen', cmap=None, norm=None, vmin=None, vmax=None, alpha=1.0, linewidths=None, zorder=5)
+ # l4 = ax.scatter(X_Values,Curvature_alpha3,s=1, marker='o', markerfacecolor='red',markeredgecolor='black',markeredgewidth=2, cmap=None, norm=None, vmin=None, vmax=None, alpha=0.5, linewidths=None, zorder=3)
+ # l5 = ax.scatter(X_Values,Curvature_alphaNeg075,s=1, marker='o', cmap=None, norm=None, vmin=None, vmax=None, alpha=None, linewidths=None, zorder=3)
+
+
+ # line_labels = [r"$\theta_\rho = -1.0$",r"$\theta_\rho = - \frac{7}{8}$", r"$\theta_\rho = - \frac{3}{4}$", r"$\theta_\rho = - \frac{5}{8}$",r"$\theta_\rho = - 0.5 $" ,r"$\theta_\rho = - 0.25", r"$\theta_\rho = - \frac{1}{8}" , r"$\theta_\rho = 0$"]
+ ax.set_yticks([0, np.pi/8, np.pi/4, 3*np.pi/8 , np.pi/2, 5*np.pi/8 ])
+ labels = ['$0$',r'$\pi/8$', r'$\pi/4$' ,r'$3\pi/8$' , r'$\pi/2$',r'$5\pi/8$']
+ ax.set_yticklabels(labels)
+
+
+
+ # ax.legend(handles=[l1,l2,l3,l4, l5, l6, l7, l8],
+ # labels= [r"$\theta_\rho = -1.0$", r"$\theta_\rho = - \frac{7}{8}$", r"$\theta_\rho = -\frac{3}{4}$" , r"$\theta_\rho = - \frac{5}{8}$", r"$\theta_\rho = - \frac{1}{2} $" , r"$\theta_\rho = - \frac{1}{4}$", r"$\theta_\rho = - \frac{1}{8}$" , r"$\theta_\rho = 0$"],
+ # loc='upper left',
+ # bbox_to_anchor=(1,1))
+
+ #
+ # ax.legend(handles=[l1,l3, l5, l7, l8],
+ # labels= [r"$\theta_\rho = -1.0$", r"$\theta_\rho = - \frac{7}{8}$", r"$\theta_\rho = -\frac{3}{4}$" , r"$\theta_\rho = - \frac{5}{8}$", r"$\theta_\rho = - \frac{1}{2} $" , r"$\theta_\rho = - \frac{1}{4}$", r"$\theta_\rho = - \frac{1}{8}$" , r"$\theta_\rho = 0$"],
+ # loc='upper left',
+ # bbox_to_anchor=(1,1))
+ #
+
+
+
+
+
+ # fig.legend([l1, l2, l3, l4], # The line objects
+ # labels=line_labels, # The labels for each line
+ # # loc="upper center", # Position of legend
+ # loc='upperleft', bbox_to_anchor=(1,1),
+ # borderaxespad=0.15 # Small spacing around legend box
+ # # title="Legend Title" # Title for the legend
+ # )
+
+ pdf_outputName = 'Plot-Curvature-Alpha_Gamma'+ str(gamma)+ '_transition'+'.pdf'
+
+ fig.set_size_inches(width, height)
+ # fig.savefig('Plot-Angle-Theta.pdf')
+ fig.savefig(pdf_outputName)
+
+
+
+
+ # tikz_save('someplot.tex', figureheight='5cm', figurewidth='9cm')
+
+ # tikz_save('fig.tikz',
+ # figureheight = '\\figureheight',
+ # figurewidth = '\\figurewidth')
+
+ # ----------------------------------------
+
+
+# plt.show()
+# #---------------------------------------------------------------
diff --git a/src/Plot-Curvature-GammaV2_SubPlots.py b/src/Plot-Curvature-GammaV2_SubPlots.py
index 36a677ddfa1221f480d2628228d93d9a4827654c..409a33711bc60c29cd7894c13620245357c98346 100644
--- a/src/Plot-Curvature-GammaV2_SubPlots.py
+++ b/src/Plot-Curvature-GammaV2_SubPlots.py
@@ -151,7 +151,7 @@ beta = 2.0
theta= 0.25
#Test
-beta = 10.0
+# beta = 10.0
# alpha_1 = -1.0
# alpha_2 = -0.75
# alpha_3 = -0.5
@@ -434,10 +434,14 @@ line_labels = [r"$\gamma^*$"]
# borderaxespad=0.15 # Small spacing around legend box
# # title="Legend Title" # Title for the legend
# )
-fig.legend([l1], [r"$\gamma^*$"],
- # bbox_to_anchor=[0.5, 0.92],
- bbox_to_anchor=[0.5, 0.94],
- loc='center', ncol=3)
+
+
+# Legend:
+
+# fig.legend([l1], [r"$\gamma^*$"],
+# # bbox_to_anchor=[0.5, 0.92],
+# bbox_to_anchor=[0.5, 0.94],
+# loc='center', ncol=3)
plt.subplots_adjust(wspace=0.4, hspace=0.0)
# plt.tight_layout()
@@ -445,7 +449,7 @@ plt.subplots_adjust(wspace=0.4, hspace=0.0)
# Adjust the scaling factor to fit your legend text completely outside the plot
# (smaller value results in more space being made for the legend)
# plt.subplots_adjust(right=0.9)
-plt.subplots_adjust(bottom=0.2)
+# plt.subplots_adjust(bottom=0.2)
fig.set_size_inches(width, height)
fig.savefig('Plot-Curvature-Gamma.pdf')
diff --git a/src/Plot_Prestrain_Lemma1.4.py b/src/Plot_Prestrain_Lemma1.4.py
index 6adc9961efbda66491ea357b8dffdc574ccc9acc..c2f8339ca14ac3bf21e173160f860309213e1a8f 100644
--- a/src/Plot_Prestrain_Lemma1.4.py
+++ b/src/Plot_Prestrain_Lemma1.4.py
@@ -228,6 +228,8 @@ fig,ax = plt.subplots(nrows=1,ncols=2,figsize=(width,height)) # more than one pl
# d = ax.get_xticklabels()
# print('xticks:',c)
# print('xticklabels:',d)
+# params = {'mathtext.default': 'regular' }
+# mpl.rcParams.update(params)
ax[0].grid(True,which='major',axis='both',alpha=0.3)
ax[1].grid(True,which='major',axis='both',alpha=0.3)
@@ -242,8 +244,12 @@ l5 = ax[0].plot(Theta_Values,B1_Values_alpha1 , label=r"$\theta_\rho = 1.0$")
l6 = ax[0].plot(Theta_Values,B1_Values_alpha2 , label=r"$\theta_\rho = 2.0$")
l7 = ax[0].plot(Theta_Values,B1_Values_alpha10 , label=r"$\theta_\rho = 10.0$")
-ax[0].set_xlabel(r"volume fraction $\theta$")
-ax[0].set_ylabel(r"prestrain $b_1$")
+# ax[0].set_xlabel(r"volume fraction $\theta$")
+ax[0].set_xlabel(r"$\theta$",fontsize=10)
+# ax[0].set_ylabel(r"prestrain $b_1$")
+# ax[0].set_title(r"$\widehat B_{\text{eff},1}^\gamma$", fontsize=10)
+ax[0].set_title(r"$\widehat B_{\mathrm{eff},1}^{\gamma}$", fontsize=10)
+
# Labels to use in the legend for each line
line_labels = [r"$\theta_\rho = -10.0$",r"$\theta_\rho = -2.0$",r"$\theta_\rho = -1.0$",r"$\theta_\rho = 0.0$" ,r"$\theta_\rho = 1.0$", r"$\theta_\rho = 2.0$", r"$\theta_\rho = 10.0$"]
@@ -256,10 +262,14 @@ ax[1].plot(Theta_Values,B2_Values_alpha1 , label=r"$\theta_\rho = 1.0$")
ax[1].plot(Theta_Values,B2_Values_alpha2 , label=r"$\theta_\rho = 2.0$")
ax[1].plot(Theta_Values,B2_Values_alpha10 , label=r"$\theta_\rho = 10.0$")
-ax[1].set_xlabel(r"volume fraction $\theta$")
-ax[1].set_ylabel(r"prestrain $b_2$")
+# ax[1].set_xlabel(r"volume fraction $\theta$")
+ax[1].set_xlabel(r"$\theta$",fontsize=10)
+# ax[1].set_ylabel(r"prestrain $b_2$")
+# ax[1].set_title(r"$\widehat B_{\text{eff},2}^{\gamma}$", fontsize=10)
+ax[1].set_title(r"$\widehat B_{\mathrm{eff},2}^{\gamma}$", fontsize=10)
plt.subplots_adjust(wspace=0.4, hspace=0)
+# plt.subplots_adjust(wspace=0.8)
plt.tight_layout()
# ax.plot(Theta_Values,B2_Values_alphaNeg1 )
# ax.plot(Theta_Values,B2_Values_alphaNeg10 )
@@ -357,7 +367,7 @@ fig.legend([l1, l2, l3, l4], # The line objects
# Adjust the scaling factor to fit your legend text completely outside the plot
# (smaller value results in more space being made for the legend)
-plt.subplots_adjust(right=0.8)
+plt.subplots_adjust(right=0.80)
# ------------------ SAVE FIGURE
# tikzplotlib.save("TesTout.tex")
diff --git a/src/Plot_Prestrain_Lemma1.4_Betas.py b/src/Plot_Prestrain_Lemma1.4_Betas.py
index 10564f7da5e5f6d0ad0c669ba746bd50cd8bc4cd..dcacbc537f6a68944079d2094f53ef23085b5575 100644
--- a/src/Plot_Prestrain_Lemma1.4_Betas.py
+++ b/src/Plot_Prestrain_Lemma1.4_Betas.py
@@ -283,8 +283,9 @@ l2 = ax.plot(Theta_Values,B2_Values_beta05 , label=r"$\theta_\mu = 0.5$")
l3 = ax.plot(Theta_Values,B2_Values_beta1 , label=r"$\theta_\mu = 1.0$")
l4 = ax.plot(Theta_Values,B2_Values_beta2 , label=r"$\theta_\mu = 2.0$")
l5 = ax.plot(Theta_Values,B2_Values_beta10 , label=r"$\theta_\mu = 10.0$")
-ax.set_xlabel(r"volume fraction $\theta$")
-ax.set_ylabel(r"prestrain $b_2$")
+ax.set_xlabel(r"$\theta$", fontsize=10)
+# ax.set_ylabel(r"prestrain $b_2$")
+ax.set_title(r"$\widehat B_{\mathrm{eff},2}^{\gamma}$", fontsize=10)
line_labels = [r"$\theta_\mu = 0.1$",r"$\theta_\mu = 0.5$", r"$\theta_\mu = 1.0$", r"$\theta_\mu = 2.0$", r"$\theta_\mu = 10.0$"]
diff --git a/src/Plot_elasticQuantities.py b/src/Plot_elasticQuantities.py
index 9e9f8462a41cd16c141227d45d49b187c61fc9c6..52ef53344f80892fc81d449afe61d224dd759da3 100644
--- a/src/Plot_elasticQuantities.py
+++ b/src/Plot_elasticQuantities.py
@@ -167,7 +167,9 @@ Q2_Values_beta10 = np.array(Q2_Values_beta10 )
# mpl.rcParams['ps.fonttype'] = 42
mpl.rcParams['text.usetex'] = True
mpl.rcParams["font.family"] = "serif"
-mpl.rcParams["font.size"] = "9"
+mpl.rcParams["font.size"] = "10"
+# plt.rcParams.update({'font.size': 22})
+# mpl.rcParams["font.size"] = "11"
# mpl.rcParams['axes.grid'] = True
# plt.rc('font', family='serif', serif='Times')
@@ -196,6 +198,7 @@ fig = plt.figure() #main
# fig, (ax, ax2) = plt.subplots(ncols=2)
fig,ax = plt.subplots(nrows=1,ncols=3,figsize=(width,height)) # more than one plot
+
# --- set overall Title
# fig.suptitle('Example of a Single Legend Shared Across Multiple Subplots')
@@ -243,69 +246,79 @@ ax[2].grid(True,which='major',axis='both',alpha=0.3)
# ax.plot(Theta_Values,B1_Values , 'royalblue')
# ax.plot(Theta_Values,B2_Values , 'royalblue')
-l1 = ax[0].plot(Theta_Values,Q1_Values_beta05 , label=r"$\theta_\mu = 0.5$")
+# l1 = ax[0].plot(Theta_Values,Q1_Values_beta05 , label=r"$\theta_\mu = 0.5$")
l2 = ax[0].plot(Theta_Values,Q1_Values_beta1 , label=r"$\theta_\mu = 1.0$")
l3 = ax[0].plot(Theta_Values,Q1_Values_beta2 , label=r"$\theta_\mu = 2.0$")
l4 = ax[0].plot(Theta_Values,Q1_Values_beta5 , label=r"$\theta_\mu = 5.0$")
l5 = ax[0].plot(Theta_Values,Q1_Values_beta10 , label=r"$\theta_\mu = 10.0$")
-ax[0].set_xlabel(r"volume fraction $\theta$")
-ax[0].set_ylabel(r" $q_1$")
+# ax[0].set_xlabel(r"volume fraction $\theta$")
+ax[0].set_xlabel(r"$\theta$",fontsize=10)
+# ax[0]ax[2].set_title(r" $q_1/q_2$").set_ylabel(r" $q_1$")
+ax[0].set_title(r" $q_1$",fontsize=10)
ax[0].xaxis.set_major_locator(MultipleLocator(0.25))
# Labels to use in the legend for each line
# line_labels = [r"$\theta_\mu = 1.0$", r"$\theta_\mu = 2.0$", r"$\theta_\mu = 5.0$", r"$\theta_\mu = 10.0$"]
-line_labels = [r"$\theta_\mu = 0.5$",r"$\theta_\mu = 1.0$", r"$\theta_\mu = 2.0$", r"$\theta_\mu = 5.0$", r"$\theta_\mu = 10.0$"]
+line_labels = [r"$\theta_\mu = 1$", r"$\theta_\mu = 2$", r"$\theta_\mu = 5$", r"$\theta_\mu = 10$"]
+# line_labels = [r"$\theta_\mu = 0.5$",r"$\theta_\mu = 1.0$", r"$\theta_\mu = 2.0$", r"$\theta_\mu = 5.0$", r"$\theta_\mu = 10.0$"]
-ax[1].plot(Theta_Values,Q2_Values_beta05 , label=r"$\theta_\rho = 0.5$")
+# ax[1].plot(Theta_Values,Q2_Values_beta05 , label=r"$\theta_\rho = 0.5$")
ax[1].plot(Theta_Values,Q2_Values_beta1 , label=r"$\theta_\rho = 1.0$")
ax[1].plot(Theta_Values,Q2_Values_beta2 , label=r"$\theta_\rho = 2.0$")
ax[1].plot(Theta_Values,Q2_Values_beta5 , label=r"$\theta_\rho = 5.0$")
ax[1].plot(Theta_Values,Q2_Values_beta10 , label=r"$\theta_\rho = 10.0$")
-ax[1].set_xlabel(r"volume fraction $\theta$")
-ax[1].set_ylabel(r" $q_2$")
+# ax[1].set_xlabel(r"volume fraction $\theta$")
+ax[1].set_xlabel(r"$\theta$",fontsize=10)
+# ax[1].set_ylabel(r" $q_2$")
+ax[1].set_title(r" $q_2$",fontsize=10)
ax[1].xaxis.set_major_locator(MultipleLocator(0.25))
# ax[1].xaxis.set_minor_locator(MultipleLocator(0.05))
-ax[2].plot(Theta_Values,Q1_Values_beta05/Q2_Values_beta05 , label=r"$\theta_\rho = 0.5$",zorder=5)
+# ax[2].plot(Theta_Values,Q1_Values_beta05/Q2_Values_beta05 , label=r"$\theta_\rho = 0.5$",zorder=5)
ax[2].plot(Theta_Values,Q1_Values_beta1/Q2_Values_beta1 , label=r"$\theta_\rho = 1.0$")
ax[2].plot(Theta_Values,Q1_Values_beta2/Q2_Values_beta2 , label=r"$\theta_\rho = 2.0$")
ax[2].plot(Theta_Values,Q1_Values_beta5/Q2_Values_beta5 , label=r"$\theta_\rho = 5.0$")
ax[2].plot(Theta_Values,Q1_Values_beta10/Q2_Values_beta10 , label=r"$\theta_\rho = 10.0$")
-ax[2].set_xlabel(r"volume fraction $\theta$")
-ax[2].set_ylabel(r" $q_1/q_2$")
+# ax[2].set_xlabel(r"volume fraction $\theta$")
+ax[2].set_xlabel(r"$\theta$",fontsize=10)
+# ax[2].set_ylabel(r" $q_1/q_2$")
+ax[2].set_title(r" $q_1/q_2$",fontsize=10)
ax[2].xaxis.set_major_locator(MultipleLocator(0.25))
-plt.subplots_adjust(wspace=0.4, hspace=0)
+# plt.subplots_adjust(wspace=0.4, hspace=0.25)
+# plt.subplots_adjust(hspace=0.15, wspace=0.25)
+plt.subplots_adjust(wspace=0.8)
plt.tight_layout()
-# fig.legend([l1, l2, l3, l4], # The line objects
-# labels=line_labels, # The labels for each line
-# loc="center right", # Position of legend
-# borderaxespad=0.15 # Small spacing around legend box
-# # title="Legend Title" # Title for the legend
-# )
-
-
-fig.legend([l1, l2, l3, l4,l5], # The line objects
+fig.legend([l2, l3, l4, l5], # The line objects
labels=line_labels, # The labels for each line
loc="center right", # Position of legend
+ # borderaxespad=0.05 # Small spacing around legend box
borderaxespad=0.15 # Small spacing around legend box
# title="Legend Title" # Title for the legend
)
+
+# fig.legend([l1, l2, l3, l4,l5], # The line objects
+# labels=line_labels, # The labels for each line
+# loc="center right", # Position of legend
+# borderaxespad=0.15 # Small spacing around legend box
+# # title="Legend Title" # Title for the legend
+# )
+
# Adjust the scaling factor to fit your legend text completely outside the plot
# (smaller value results in more space being made for the legend)
-plt.subplots_adjust(right=0.8)
+plt.subplots_adjust(right=0.83)
# ------------------ SAVE FIGURE
# tikzplotlib.save("TesTout.tex")
diff --git a/src/Plotq12.py b/src/Plotq12.py
index 1fee96ef7bdc152621a80ecc232333593fed4acd..3f7aadd26f902462c3a3f15a4c9757bddae8fb95 100644
--- a/src/Plotq12.py
+++ b/src/Plotq12.py
@@ -40,7 +40,7 @@ print("Path: ", path)
#---------------------------------------------------------------
Lambda_Values = np.linspace(0.0, 10.0, num=11)
-Lambda_Values = np.linspace(0.0, 5.0, num=6)
+# Lambda_Values = np.linspace(0.0, 5.0, num=6)
# Lambda_Values = np.linspace(3.0, 5.0, num=20)
print(Lambda_Values)
q12 = []
diff --git a/src/plot_Elastic_and_PrestrainRatio.py b/src/plot_Elastic_and_PrestrainRatio.py
index 6604a58eecb3b5b462e96810ed7f50592fe8c418..fa76d910f587388564b8a705a48fa131a058adf4 100644
--- a/src/plot_Elastic_and_PrestrainRatio.py
+++ b/src/plot_Elastic_and_PrestrainRatio.py
@@ -172,6 +172,9 @@ for gamma in Gamma_Values:
# thetas_ = np.linspace(0.05,0.25,SamplePoints_2D)
# betas_ = 10.0
alphas_ = -0.5
+ # alphas_ = -3.0
+ # alphas_ = -3.0
+ alphas_ = 5.0
betas_ = np.linspace(1.01,10.01,SamplePoints_3D) #TEST !!!!! For Beta <1 weird tings happen...
alphas, betas, thetas = np.meshgrid(alphas_, betas_, thetas_, indexing='ij')
@@ -189,8 +192,8 @@ for gamma in Gamma_Values:
GetMuGammaVec = np.vectorize(GetMuGamma)
muGammas = GetMuGammaVec(betas,thetas,gamma,mu1,rho1,InputFilePath ,OutputFilePath )
- q1 = harmonicMeanVec(mu1, betas, thetas)
- q2 = arithmeticMeanVec(mu1, betas, thetas)
+ q1 = (1.0/6.0)*harmonicMeanVec(mu1, betas, thetas)
+ q2 = (1.0/6.0)*arithmeticMeanVec(mu1, betas, thetas)
b1 = prestrain_b1Vec(rho1, betas, alphas, thetas)
b2 = prestrain_b2Vec(rho1, betas, alphas, thetas)
@@ -213,6 +216,10 @@ for gamma in Gamma_Values:
print('q2:', q2)
print('q1/q2:', q1/q2)
+ print('prestrain ratio b1/b2:', prestrainRatio)
+ print('max prestrain ratio:', np.max(prestrainRatio))
+ print('min prestrain ratio:', np.min(prestrainRatio))
+
GammaString = str(gamma)
VTKOutputName = "outputs/ElasticRatio" #+ "Gamma_" + GammaString