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Commit 005e656e authored by Thomas Witkowski's avatar Thomas Witkowski
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Added MINRES solver to MTL4, not tested yet.

parent aed609e4
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AMDiS/libtool
View file @ 005e656e
...@@ -30,10 +30,10 @@ ...@@ -30,10 +30,10 @@
# the same distribution terms that you use for the rest of that program. # the same distribution terms that you use for the rest of that program.
# A sed program that does not truncate output. # A sed program that does not truncate output.
SED="/usr/bin/sed" SED="/bin/sed"
# Sed that helps us avoid accidentally triggering echo(1) options like -n. # Sed that helps us avoid accidentally triggering echo(1) options like -n.
Xsed="/usr/bin/sed -e 1s/^X//" Xsed="/bin/sed -e 1s/^X//"
# The HP-UX ksh and POSIX shell print the target directory to stdout # The HP-UX ksh and POSIX shell print the target directory to stdout
# if CDPATH is set. # if CDPATH is set.
...@@ -44,7 +44,7 @@ available_tags=" CXX F77" ...@@ -44,7 +44,7 @@ available_tags=" CXX F77"
# ### BEGIN LIBTOOL CONFIG # ### BEGIN LIBTOOL CONFIG
# Libtool was configured on host deimos101: # Libtool was configured on host NWRW15:
# Shell to use when invoking shell scripts. # Shell to use when invoking shell scripts.
SHELL="/bin/sh" SHELL="/bin/sh"
...@@ -66,12 +66,12 @@ fast_install=yes ...@@ -66,12 +66,12 @@ fast_install=yes
# The host system. # The host system.
host_alias= host_alias=
host=x86_64-unknown-linux-gnu host=i686-pc-linux-gnu
host_os=linux-gnu host_os=linux-gnu
# The build system. # The build system.
build_alias= build_alias=
build=x86_64-unknown-linux-gnu build=i686-pc-linux-gnu
build_os=linux-gnu build_os=linux-gnu
# An echo program that does not interpret backslashes. # An echo program that does not interpret backslashes.
...@@ -82,13 +82,13 @@ AR="ar" ...@@ -82,13 +82,13 @@ AR="ar"
AR_FLAGS="cru" AR_FLAGS="cru"
# A C compiler. # A C compiler.
LTCC="/licsoft/libraries/openmpi/1.2.6/64bit/bin/mpicc" LTCC="gcc"
# LTCC compiler flags. # LTCC compiler flags.
LTCFLAGS="-g -O2" LTCFLAGS="-g -O2"
# A language-specific compiler. # A language-specific compiler.
CC="/licsoft/libraries/openmpi/1.2.6/64bit/bin/mpicc" CC="gcc"
# Is the compiler the GNU C compiler? # Is the compiler the GNU C compiler?
with_gcc=yes with_gcc=yes
...@@ -97,7 +97,7 @@ with_gcc=yes ...@@ -97,7 +97,7 @@ with_gcc=yes
EGREP="grep -E" EGREP="grep -E"
# The linker used to build libraries. # The linker used to build libraries.
LD="/usr/x86_64-suse-linux/bin/ld -m elf_x86_64" LD="/usr/bin/ld"
# Whether we need hard or soft links. # Whether we need hard or soft links.
LN_S="ln -s" LN_S="ln -s"
...@@ -171,7 +171,7 @@ dlopen_self=unknown ...@@ -171,7 +171,7 @@ dlopen_self=unknown
dlopen_self_static=unknown dlopen_self_static=unknown
# Compiler flag to prevent dynamic linking. # Compiler flag to prevent dynamic linking.
link_static_flag="" link_static_flag="-static"
# Compiler flag to turn off builtin functions. # Compiler flag to turn off builtin functions.
no_builtin_flag=" -fno-builtin" no_builtin_flag=" -fno-builtin"
...@@ -325,10 +325,10 @@ variables_saved_for_relink="PATH LD_LIBRARY_PATH LD_RUN_PATH GCC_EXEC_PREFIX COM ...@@ -325,10 +325,10 @@ variables_saved_for_relink="PATH LD_LIBRARY_PATH LD_RUN_PATH GCC_EXEC_PREFIX COM
link_all_deplibs=unknown link_all_deplibs=unknown
# Compile-time system search path for libraries # Compile-time system search path for libraries
sys_lib_search_path_spec=" /usr/lib64/gcc/x86_64-suse-linux/4.1.2/ /usr/lib/gcc/x86_64-suse-linux/4.1.2/ /usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../../x86_64-suse-linux/lib/x86_64-suse-linux/4.1.2/ /usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../../x86_64-suse-linux/lib/../lib64/ /usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../x86_64-suse-linux/4.1.2/ /usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../../lib64/ /lib/x86_64-suse-linux/4.1.2/ /lib/../lib64/ /usr/lib/x86_64-suse-linux/4.1.2/ /usr/lib/../lib64/ /usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../../x86_64-suse-linux/lib/ /usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../ /lib/ /usr/lib/" sys_lib_search_path_spec=" /usr/lib/gcc/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../../i386-redhat-linux/lib/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../../i386-redhat-linux/lib/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../ /lib/i386-redhat-linux/4.1.2/ /lib/ /usr/lib/i386-redhat-linux/4.1.2/ /usr/lib/"
# Run-time system search path for libraries # Run-time system search path for libraries
sys_lib_dlsearch_path_spec="/lib /usr/lib /usr/X11R6/lib64/Xaw3d /usr/X11R6/lib64 /usr/X11R6/lib/Xaw3d /usr/X11R6/lib /usr/x86_64-suse-linux/lib /usr/local/lib64 /usr/local/lib /opt/kde3/lib64 /opt/kde3/lib /opt/gnome/lib64 /opt/gnome/lib /lib64 /lib /usr/lib64 /usr/lib /opt/cluster/intel/cce/9.1.042/lib /opt/cluster/intel/fce/9.1.036/lib /opt/cluster/Pathscale3.0/lib/2.9.99 /opt/cluster/Pathscale3.0/lib/2.9.99/32 /work/licsoft/compilers/pgi/linux86-64/6.2/lib /work/licsoft/compilers/pgi/linux86-64/6.2/libso " sys_lib_dlsearch_path_spec="/lib /usr/lib /usr/lib/octave-2.9.9 /usr/lib/qt-3.3/lib /usr/lib/qt4/lib "
# Fix the shell variable $srcfile for the compiler. # Fix the shell variable $srcfile for the compiler.
fix_srcfile_path="" fix_srcfile_path=""
...@@ -6760,7 +6760,7 @@ build_old_libs=`case $build_libtool_libs in yes) $echo no;; *) $echo yes;; esac` ...@@ -6760,7 +6760,7 @@ build_old_libs=`case $build_libtool_libs in yes) $echo no;; *) $echo yes;; esac`
# End: # End:
# ### BEGIN LIBTOOL TAG CONFIG: CXX # ### BEGIN LIBTOOL TAG CONFIG: CXX
# Libtool was configured on host deimos101: # Libtool was configured on host NWRW15:
# Shell to use when invoking shell scripts. # Shell to use when invoking shell scripts.
SHELL="/bin/sh" SHELL="/bin/sh"
...@@ -6782,12 +6782,12 @@ fast_install=yes ...@@ -6782,12 +6782,12 @@ fast_install=yes
# The host system. # The host system.
host_alias= host_alias=
host=x86_64-unknown-linux-gnu host=i686-pc-linux-gnu
host_os=linux-gnu host_os=linux-gnu
# The build system. # The build system.
build_alias= build_alias=
build=x86_64-unknown-linux-gnu build=i686-pc-linux-gnu
build_os=linux-gnu build_os=linux-gnu
# An echo program that does not interpret backslashes. # An echo program that does not interpret backslashes.
...@@ -6798,13 +6798,13 @@ AR="ar" ...@@ -6798,13 +6798,13 @@ AR="ar"
AR_FLAGS="cru" AR_FLAGS="cru"
# A C compiler. # A C compiler.
LTCC="/licsoft/libraries/openmpi/1.2.6/64bit/bin/mpicc" LTCC="gcc"
# LTCC compiler flags. # LTCC compiler flags.
LTCFLAGS="-g -O2" LTCFLAGS="-g -O2"
# A language-specific compiler. # A language-specific compiler.
CC="/licsoft/libraries/openmpi/1.2.6/64bit/bin/mpiCC" CC="g++"
# Is the compiler the GNU C compiler? # Is the compiler the GNU C compiler?
with_gcc=yes with_gcc=yes
...@@ -6813,7 +6813,7 @@ with_gcc=yes ...@@ -6813,7 +6813,7 @@ with_gcc=yes
EGREP="grep -E" EGREP="grep -E"
# The linker used to build libraries. # The linker used to build libraries.
LD="/usr/x86_64-suse-linux/bin/ld -m elf_x86_64" LD="/usr/bin/ld"
# Whether we need hard or soft links. # Whether we need hard or soft links.
LN_S="ln -s" LN_S="ln -s"
...@@ -6887,7 +6887,7 @@ dlopen_self=unknown ...@@ -6887,7 +6887,7 @@ dlopen_self=unknown
dlopen_self_static=unknown dlopen_self_static=unknown
# Compiler flag to prevent dynamic linking. # Compiler flag to prevent dynamic linking.
link_static_flag="" link_static_flag="-static"
# Compiler flag to turn off builtin functions. # Compiler flag to turn off builtin functions.
no_builtin_flag=" -fno-builtin" no_builtin_flag=" -fno-builtin"
...@@ -6942,11 +6942,11 @@ striplib="strip --strip-unneeded" ...@@ -6942,11 +6942,11 @@ striplib="strip --strip-unneeded"
# Dependencies to place before the objects being linked to create a # Dependencies to place before the objects being linked to create a
# shared library. # shared library.
predep_objects="/usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../../lib64/crti.o /usr/lib64/gcc/x86_64-suse-linux/4.1.2/crtbeginS.o" predep_objects="/usr/lib/gcc/i386-redhat-linux/4.1.2/../../../crti.o /usr/lib/gcc/i386-redhat-linux/4.1.2/crtbeginS.o"
# Dependencies to place after the objects being linked to create a # Dependencies to place after the objects being linked to create a
# shared library. # shared library.
postdep_objects="/usr/lib64/gcc/x86_64-suse-linux/4.1.2/crtendS.o /usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../../lib64/crtn.o" postdep_objects="/usr/lib/gcc/i386-redhat-linux/4.1.2/crtendS.o /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../crtn.o"
# Dependencies to place before the objects being linked to create a # Dependencies to place before the objects being linked to create a
# shared library. # shared library.
...@@ -6954,11 +6954,11 @@ predeps="" ...@@ -6954,11 +6954,11 @@ predeps=""
# Dependencies to place after the objects being linked to create a # Dependencies to place after the objects being linked to create a
# shared library. # shared library.
postdeps="-lmpi_cxx -lmpi -lopen-rte -lopen-pal -libverbs -lrt -lnuma -ldl -lnsl -lutil -ldl -lstdc++ -lm -lgcc_s -lpthread -lc -lgcc_s" postdeps="-lstdc++ -lm -lgcc_s -lc -lgcc_s"
# The library search path used internally by the compiler when linking # The library search path used internally by the compiler when linking
# a shared library. # a shared library.
compiler_lib_search_path="-L/usr/lib64 -L/licsoft/libraries/openmpi/1.2.6/64bit/lib -L/usr/lib64/gcc/x86_64-suse-linux/4.1.2 -L/usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../../x86_64-suse-linux/lib -L/usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../.." compiler_lib_search_path="-L/usr/lib/gcc/i386-redhat-linux/4.1.2 -L/usr/lib/gcc/i386-redhat-linux/4.1.2 -L/usr/lib/gcc/i386-redhat-linux/4.1.2/../../.."
# Method to check whether dependent libraries are shared objects. # Method to check whether dependent libraries are shared objects.
deplibs_check_method="pass_all" deplibs_check_method="pass_all"
...@@ -7038,10 +7038,10 @@ variables_saved_for_relink="PATH LD_LIBRARY_PATH LD_RUN_PATH GCC_EXEC_PREFIX COM ...@@ -7038,10 +7038,10 @@ variables_saved_for_relink="PATH LD_LIBRARY_PATH LD_RUN_PATH GCC_EXEC_PREFIX COM
link_all_deplibs=unknown link_all_deplibs=unknown
# Compile-time system search path for libraries # Compile-time system search path for libraries
sys_lib_search_path_spec=" /usr/lib64/gcc/x86_64-suse-linux/4.1.2/ /usr/lib/gcc/x86_64-suse-linux/4.1.2/ /usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../../x86_64-suse-linux/lib/x86_64-suse-linux/4.1.2/ /usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../../x86_64-suse-linux/lib/../lib64/ /usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../x86_64-suse-linux/4.1.2/ /usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../../lib64/ /lib/x86_64-suse-linux/4.1.2/ /lib/../lib64/ /usr/lib/x86_64-suse-linux/4.1.2/ /usr/lib/../lib64/ /usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../../x86_64-suse-linux/lib/ /usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../ /lib/ /usr/lib/" sys_lib_search_path_spec=" /usr/lib/gcc/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../../i386-redhat-linux/lib/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../../i386-redhat-linux/lib/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../ /lib/i386-redhat-linux/4.1.2/ /lib/ /usr/lib/i386-redhat-linux/4.1.2/ /usr/lib/"
# Run-time system search path for libraries # Run-time system search path for libraries
sys_lib_dlsearch_path_spec="/lib /usr/lib /usr/X11R6/lib64/Xaw3d /usr/X11R6/lib64 /usr/X11R6/lib/Xaw3d /usr/X11R6/lib /usr/x86_64-suse-linux/lib /usr/local/lib64 /usr/local/lib /opt/kde3/lib64 /opt/kde3/lib /opt/gnome/lib64 /opt/gnome/lib /lib64 /lib /usr/lib64 /usr/lib /opt/cluster/intel/cce/9.1.042/lib /opt/cluster/intel/fce/9.1.036/lib /opt/cluster/Pathscale3.0/lib/2.9.99 /opt/cluster/Pathscale3.0/lib/2.9.99/32 /work/licsoft/compilers/pgi/linux86-64/6.2/lib /work/licsoft/compilers/pgi/linux86-64/6.2/libso " sys_lib_dlsearch_path_spec="/lib /usr/lib /usr/lib/octave-2.9.9 /usr/lib/qt-3.3/lib /usr/lib/qt4/lib "
# Fix the shell variable $srcfile for the compiler. # Fix the shell variable $srcfile for the compiler.
fix_srcfile_path="" fix_srcfile_path=""
...@@ -7065,7 +7065,7 @@ include_expsyms="" ...@@ -7065,7 +7065,7 @@ include_expsyms=""
# ### BEGIN LIBTOOL TAG CONFIG: F77 # ### BEGIN LIBTOOL TAG CONFIG: F77
# Libtool was configured on host deimos101: # Libtool was configured on host NWRW15:
# Shell to use when invoking shell scripts. # Shell to use when invoking shell scripts.
SHELL="/bin/sh" SHELL="/bin/sh"
...@@ -7087,12 +7087,12 @@ fast_install=yes ...@@ -7087,12 +7087,12 @@ fast_install=yes
# The host system. # The host system.
host_alias= host_alias=
host=x86_64-unknown-linux-gnu host=i686-pc-linux-gnu
host_os=linux-gnu host_os=linux-gnu
# The build system. # The build system.
build_alias= build_alias=
build=x86_64-unknown-linux-gnu build=i686-pc-linux-gnu
build_os=linux-gnu build_os=linux-gnu
# An echo program that does not interpret backslashes. # An echo program that does not interpret backslashes.
...@@ -7103,7 +7103,7 @@ AR="ar" ...@@ -7103,7 +7103,7 @@ AR="ar"
AR_FLAGS="cru" AR_FLAGS="cru"
# A C compiler. # A C compiler.
LTCC="/licsoft/libraries/openmpi/1.2.6/64bit/bin/mpicc" LTCC="gcc"
# LTCC compiler flags. # LTCC compiler flags.
LTCFLAGS="-g -O2" LTCFLAGS="-g -O2"
...@@ -7112,13 +7112,13 @@ LTCFLAGS="-g -O2" ...@@ -7112,13 +7112,13 @@ LTCFLAGS="-g -O2"
CC="g77" CC="g77"
# Is the compiler the GNU C compiler? # Is the compiler the GNU C compiler?
with_gcc= with_gcc=yes
# An ERE matcher. # An ERE matcher.
EGREP="grep -E" EGREP="grep -E"
# The linker used to build libraries. # The linker used to build libraries.
LD="/usr/x86_64-suse-linux/bin/ld -m elf_x86_64" LD="/usr/bin/ld"
# Whether we need hard or soft links. # Whether we need hard or soft links.
LN_S="ln -s" LN_S="ln -s"
...@@ -7346,10 +7346,10 @@ variables_saved_for_relink="PATH LD_LIBRARY_PATH LD_RUN_PATH GCC_EXEC_PREFIX COM ...@@ -7346,10 +7346,10 @@ variables_saved_for_relink="PATH LD_LIBRARY_PATH LD_RUN_PATH GCC_EXEC_PREFIX COM
link_all_deplibs=unknown link_all_deplibs=unknown
# Compile-time system search path for libraries # Compile-time system search path for libraries
sys_lib_search_path_spec=" /usr/lib64/gcc-lib/x86_64-suse-linux/3.3.5/ /usr/lib/gcc/x86_64-suse-linux/3.3.5/ /usr/lib64/gcc-lib/x86_64-suse-linux/3.3.5/../../../../x86_64-suse-linux/lib/x86_64-suse-linux/3.3.5/ /usr/lib64/gcc-lib/x86_64-suse-linux/3.3.5/../../../../x86_64-suse-linux/lib/ /usr/lib64/gcc-lib/x86_64-suse-linux/3.3.5/../../../x86_64-suse-linux/3.3.5/ /usr/lib64/gcc-lib/x86_64-suse-linux/3.3.5/../../../ /lib/x86_64-suse-linux/3.3.5/ /lib/ /usr/lib/x86_64-suse-linux/3.3.5/ /usr/lib/" sys_lib_search_path_spec=" /usr/lib/gcc/i386-redhat-linux/3.4.6/ /usr/lib/gcc/i386-redhat-linux/3.4.6/ /usr/lib/gcc/i386-redhat-linux/3.4.6/../../../../i386-redhat-linux/lib/i386-redhat-linux/3.4.6/ /usr/lib/gcc/i386-redhat-linux/3.4.6/../../../../i386-redhat-linux/lib/ /usr/lib/gcc/i386-redhat-linux/3.4.6/../../../i386-redhat-linux/3.4.6/ /usr/lib/gcc/i386-redhat-linux/3.4.6/../../../ /lib/i386-redhat-linux/3.4.6/ /lib/ /usr/lib/i386-redhat-linux/3.4.6/ /usr/lib/"
# Run-time system search path for libraries # Run-time system search path for libraries
sys_lib_dlsearch_path_spec="/lib /usr/lib /usr/X11R6/lib64/Xaw3d /usr/X11R6/lib64 /usr/X11R6/lib/Xaw3d /usr/X11R6/lib /usr/x86_64-suse-linux/lib /usr/local/lib64 /usr/local/lib /opt/kde3/lib64 /opt/kde3/lib /opt/gnome/lib64 /opt/gnome/lib /lib64 /lib /usr/lib64 /usr/lib /opt/cluster/intel/cce/9.1.042/lib /opt/cluster/intel/fce/9.1.036/lib /opt/cluster/Pathscale3.0/lib/2.9.99 /opt/cluster/Pathscale3.0/lib/2.9.99/32 /work/licsoft/compilers/pgi/linux86-64/6.2/lib /work/licsoft/compilers/pgi/linux86-64/6.2/libso " sys_lib_dlsearch_path_spec="/lib /usr/lib /usr/lib/octave-2.9.9 /usr/lib/qt-3.3/lib /usr/lib/qt4/lib "
# Fix the shell variable $srcfile for the compiler. # Fix the shell variable $srcfile for the compiler.
fix_srcfile_path="" fix_srcfile_path=""
......
AMDiS/src/CreatorMap.cc
View file @ 005e656e
...@@ -52,6 +52,9 @@ namespace AMDiS { ...@@ -52,6 +52,9 @@ namespace AMDiS {
creator = new IDRsSolver::Creator; creator = new IDRsSolver::Creator;
addCreator("idr_s", creator); addCreator("idr_s", creator);
creator = new MinResSolver::Creator;
addCreator("minres", creator);
#ifdef HAVE_UMFPACK #ifdef HAVE_UMFPACK
creator = new UmfPackSolver::Creator; creator = new UmfPackSolver::Creator;
addCreator("umfpack", creator); addCreator("umfpack", creator);
......
AMDiS/src/ITL_Solver.h
View file @ 005e656e
...@@ -33,7 +33,7 @@ ...@@ -33,7 +33,7 @@
#include <boost/numeric/itl/krylov/idr_s.hpp> #include <boost/numeric/itl/krylov/idr_s.hpp>
#include <boost/numeric/itl/krylov/qmr.hpp> #include <boost/numeric/itl/krylov/qmr.hpp>
#include <boost/numeric/itl/krylov/tfqmr.hpp> #include <boost/numeric/itl/krylov/tfqmr.hpp>
#include <boost/numeric/itl/krylov/minres.hpp>
namespace AMDiS { namespace AMDiS {
...@@ -331,6 +331,37 @@ namespace AMDiS { ...@@ -331,6 +331,37 @@ namespace AMDiS {
}; };
// ============================================================================
// ===== class Minres ========================================================
// ============================================================================
/// Helper class to establish a type from a function
class minres_solver_type
{
public:
template < class LinOp, class X, class B, class L, class R, class I >
int operator()(const LinOp& A, X& x, const B& b, const L& l, const R& r, I& iter)
{
return itl::minres(A, x, b, l, r, iter);
}
};
/**
* \ingroup Solver
*
* \brief
* Solves a linear system by the Minres method. Can be used for symmetric
* indefinite systems.
*/
class MinResSolver : public ITL_OEMSolver<minres_solver_type>
{
public:
/// The constructor reads required parameters and sets solvers \ref name.
MinResSolver(std::string name) : ITL_OEMSolver<minres_solver_type>(name) {}
};
} // namespace AMDiS } // namespace AMDiS
......
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