Skip to content
GitLab
Projects
Groups
Snippets
Help
Loading...
Help
What's new
7
Help
Support
Community forum
Keyboard shortcuts
?
Submit feedback
Contribute to GitLab
Sign in
Toggle navigation
Open sidebar
Backofen, Rainer
amdis
Commits
5e1ecd7e
Commit
5e1ecd7e
authored
Feb 09, 2012
by
Praetorius, Simon
Browse files
Options
Browse Files
Download
Email Patches
Plain Diff
FileWriter.hh added
parent
3056a9f6
Changes
1
Hide whitespace changes
Inline
Side-by-side
Showing
1 changed file
with
269 additions
and
0 deletions
+269
-0
AMDiS/src/io/FileWriter.hh
AMDiS/src/io/FileWriter.hh
+269
-0
No files found.
AMDiS/src/io/FileWriter.hh
0 → 100644
View file @
5e1ecd7e
//
// Software License for AMDiS
//
// Copyright (c) 2010 Dresden University of Technology
// All rights reserved.
// Authors: Simon Vey, Thomas Witkowski et al.
//
// This file is part of AMDiS
//
// See also license.opensource.txt in the distribution.
/** \file FileWriter.hh */
#ifndef AMDIS_FILEWRITER_HH
#define AMDIS_FILEWRITER_HH
#include "boost/lexical_cast.hpp"
#include "FileWriter.h"
#include "Initfile.h"
#include "ValueWriter.h"
#include "MacroWriter.h"
#include "VtkWriter.h"
#include "VtkVectorWriter.h"
#include "VtkVectorWriter.hh"
#include "PngWriter.h"
#include "PovrayWriter.h"
#include "DofWriter.h"
#include "ArhWriter.h"
#include "FiniteElemSpace.h"
#include "AdaptInfo.h"
#include "Flag.h"
#include "ElInfo.h"
#include "Mesh.h"
#include "SystemVector.h"
#include "DataCollector.hh"
#if HAVE_PARALLEL_DOMAIN_AMDIS
#include <mpi.h>
#endif
namespace
AMDiS
{
using
boost
::
lexical_cast
;
template
<
typename
T
>
FileWriterTemplated
<
T
>::
FileWriterTemplated
(
std
::
string
str
,
Mesh
*
m
,
DOFVector
<
T
>
*
vec
)
:
name
(
str
),
mesh
(
m
)
{
FUNCNAME
(
"FileWriterTemplated<T>::FileWriter()"
);
initialize
();
feSpace
=
vec
->
getFeSpace
();
solutionVecs
.
resize
(
1
);
solutionVecs
[
0
]
=
vec
;
}
template
<
typename
T
>
FileWriterTemplated
<
T
>::
FileWriterTemplated
(
std
::
string
name_
,
Mesh
*
mesh_
,
std
::
vector
<
DOFVector
<
T
>*>
vecs
)
:
name
(
name_
),
mesh
(
mesh_
)
{
FUNCNAME
(
"FileWriterTemplated<T>::FileWriterTemplated()"
);
initialize
();
for
(
int
i
=
0
;
i
<
static_cast
<
int
>
(
vecs
.
size
());
i
++
)
TEST_EXIT
(
vecs
[
0
]
->
getFeSpace
()
==
vecs
[
i
]
->
getFeSpace
())
(
"All FeSpace have to be equal!
\n
"
);
feSpace
=
vecs
[
0
]
->
getFeSpace
();
solutionVecs
=
vecs
;
}
template
<
typename
T
>
FileWriterTemplated
<
T
>::
FileWriterTemplated
(
std
::
string
name_
,
Mesh
*
mesh_
,
SystemVector
*
vecs
)
:
name
(
name_
),
mesh
(
mesh_
)
{
ERROR
(
"SystemVector contains DOFVectors of type double, so the FileWriterTemplated<not double> can not be used!
\n
"
);
}
template
<
typename
T
>
FileWriterTemplated
<
T
>::~
FileWriterTemplated
()
{
// Do not forget to delete temporal solution vector, if there have been
// some created in the constructor.
if
(
nTmpSolutions
>
0
)
for
(
int
i
=
0
;
i
<
nTmpSolutions
;
i
++
)
delete
solutionVecs
[
i
];
}
template
<
typename
T
>
void
FileWriterTemplated
<
T
>::
initialize
()
{
amdisMeshExt
=
".mesh"
;
amdisDataExt
=
".dat"
;
paraviewFileExt
=
".vtu"
;
paraviewParallelFileExt
=
".pvtu"
;
periodicFileExt
=
".per"
;
writeAMDiSFormat
=
0
;
writeParaViewFormat
=
0
;
writeParaViewVectorFormat
=
0
;
writeAs3dVector
=
false
;
writeParaViewAnimation
=
0
;
writePeriodicFormat
=
0
;
writePngFormat
=
0
;
writePovrayFormat
=
0
;
writeDofFormat
=
0
;
writeArhFormat
=
0
;
pngType
=
0
;
appendIndex
=
0
;
indexLength
=
5
;
indexDecimals
=
3
;
tsModulo
=
1
;
nTmpSolutions
=
0
;
paraviewAnimationFrames
.
resize
(
0
),
compression
=
NONE
;
readParameters
();
}
template
<
typename
T
>
void
FileWriterTemplated
<
T
>::
readParameters
()
{
FUNCNAME
(
"FileWriterTemplated<T>::readParamters()"
);
Parameters
::
get
(
name
+
"->filename"
,
filename
);
Parameters
::
get
(
name
+
"->AMDiS format"
,
writeAMDiSFormat
);
Parameters
::
get
(
name
+
"->AMDiS mesh ext"
,
amdisMeshExt
);
Parameters
::
get
(
name
+
"->AMDiS data ext"
,
amdisDataExt
);
Parameters
::
get
(
name
+
"->ParaView format"
,
writeParaViewFormat
);
Parameters
::
get
(
name
+
"->ParaView vector format"
,
writeParaViewVectorFormat
);
Parameters
::
get
(
name
+
"->write vector as 3d vector"
,
writeAs3dVector
);
Parameters
::
get
(
name
+
"->ParaView animation"
,
writeParaViewAnimation
);
Parameters
::
get
(
name
+
"->ParaView ext"
,
paraviewFileExt
);
Parameters
::
get
(
name
+
"->Periodic format"
,
writePeriodicFormat
);
Parameters
::
get
(
name
+
"->Periodic ext"
,
periodicFileExt
);
Parameters
::
get
(
name
+
"->PNG format"
,
writePngFormat
);
Parameters
::
get
(
name
+
"->PNG type"
,
pngType
);
Parameters
::
get
(
name
+
"->append index"
,
appendIndex
);
Parameters
::
get
(
name
+
"->index length"
,
indexLength
);
Parameters
::
get
(
name
+
"->index decimals"
,
indexDecimals
);
Parameters
::
get
(
name
+
"->write every i-th timestep"
,
tsModulo
);
Parameters
::
get
(
name
+
"->Povray format"
,
writePovrayFormat
);
Parameters
::
get
(
name
+
"->Povray template"
,
povrayTemplate
);
Parameters
::
get
(
name
+
"->Povray camera location"
,
povrayCameraLocation
);
Parameters
::
get
(
name
+
"->Povray camera look_at"
,
povrayCameraLookAt
);
Parameters
::
get
(
name
+
"->DOF format"
,
writeDofFormat
);
Parameters
::
get
(
name
+
"->ARH format"
,
writeArhFormat
);
std
::
string
compressionStr
=
""
;
Parameters
::
get
(
name
+
"->compression"
,
compressionStr
);
if
(
compressionStr
==
"gzip"
||
compressionStr
==
"gz"
)
{
compression
=
GZIP
;
}
else
if
(
compressionStr
==
"bzip2"
||
compressionStr
==
"bz2"
)
{
compression
=
BZIP2
;
}
}
template
<
typename
T
>
void
FileWriterTemplated
<
T
>::
writeFiles
(
AdaptInfo
*
adaptInfo
,
bool
force
,
int
level
,
Flag
flag
,
bool
(
*
writeElem
)(
ElInfo
*
))
{
FUNCNAME
(
"FileWriterTemplated<T>::writeFiles()"
);
if
((
adaptInfo
->
getTimestepNumber
()
%
tsModulo
!=
0
)
&&
!
force
)
return
;
// Containers, which store the data to be written;
std
::
vector
<
DataCollector
<
T
>*>
dataCollectors
(
solutionVecs
.
size
());
if
(
writeElem
)
{
for
(
int
i
=
0
;
i
<
static_cast
<
int
>
(
dataCollectors
.
size
());
i
++
)
dataCollectors
[
i
]
=
new
DataCollector
<
T
>
(
feSpace
,
solutionVecs
[
i
],
level
,
flag
,
writeElem
);
}
else
{
for
(
int
i
=
0
;
i
<
static_cast
<
int
>
(
dataCollectors
.
size
());
i
++
)
dataCollectors
[
i
]
=
new
DataCollector
<
T
>
(
feSpace
,
solutionVecs
[
i
],
traverseLevel
,
flag
|
traverseFlag
,
writeElement
);
}
std
::
string
fn
=
filename
;
#if HAVE_PARALLEL_DOMAIN_AMDIS
std
::
string
paraFilename
=
fn
;
fn
+=
"-p"
+
lexical_cast
<
std
::
string
>
(
MPI
::
COMM_WORLD
.
Get_rank
())
+
"-"
;
std
::
string
postfix
=
""
;
#endif
if
(
appendIndex
)
{
TEST_EXIT
(
indexLength
<=
99
)(
"index lenght > 99
\n
"
);
TEST_EXIT
(
indexDecimals
<=
97
)(
"index decimals > 97
\n
"
);
TEST_EXIT
(
indexDecimals
<
indexLength
)(
"index length <= index decimals
\n
"
);
char
formatStr
[
9
];
char
timeStr
[
20
];
sprintf
(
formatStr
,
"%%0%d.%df"
,
indexLength
,
indexDecimals
);
sprintf
(
timeStr
,
formatStr
,
adaptInfo
?
adaptInfo
->
getTime
()
:
0.0
);
fn
+=
timeStr
;
#if HAVE_PARALLEL_DOMAIN_AMDIS
paraFilename
+=
timeStr
;
postfix
+=
timeStr
+
paraviewFileExt
;
#endif
}
else
{
#if HAVE_PARALLEL_DOMAIN_AMDIS
postfix
+=
paraviewFileExt
;
#endif
}
if
(
writeParaViewVectorFormat
)
{
VtkVectorWriter
::
Impl
<
T
>
vtkVectorWriter
(
&
dataCollectors
,
writeAs3dVector
);
vtkVectorWriter
.
setCompression
(
compression
);
vtkVectorWriter
.
writeFile
(
fn
+
paraviewFileExt
);
#if HAVE_PARALLEL_DOMAIN_AMDIS
if
(
MPI
::
COMM_WORLD
.
Get_rank
()
==
0
)
vtkVectorWriter
.
writeParallelFile
(
paraFilename
+
paraviewParallelFileExt
,
MPI
::
COMM_WORLD
.
Get_size
(),
filename
,
postfix
);
#endif
MSG
(
"ParaView file written to %s
\n
"
,
(
fn
+
paraviewFileExt
).
c_str
());
}
if
(
writeParaViewAnimation
)
{
#if HAVE_PARALLEL_DOMAIN_AMDIS
if
(
MPI
::
COMM_WORLD
.
Get_rank
()
==
0
)
{
VtkWriter
::
updateAnimationFile
(
adaptInfo
,
paraFilename
+
paraviewParallelFileExt
,
&
paraviewAnimationFrames
,
filename
+
".pvd"
);
}
#else
VtkWriter
::
updateAnimationFile
(
adaptInfo
,
fn
+
paraviewFileExt
,
&
paraviewAnimationFrames
,
filename
+
".pvd"
);
#endif
}
for
(
int
i
=
0
;
i
<
static_cast
<
int
>
(
dataCollectors
.
size
());
i
++
)
delete
dataCollectors
[
i
];
}
}
#endif
Write
Preview
Markdown
is supported
0%
Try again
or
attach a new file
.
Attach a file
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Cancel
Please
register
or
sign in
to comment