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Commit a547037e authored by Thomas Witkowski's avatar Thomas Witkowski
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New source code structure for operators.

parent 52b71d1f
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Showing with 6505 additions and 6132 deletions
AMDiS/bin/Makefile.am
View file @ a547037e
......@@ -120,6 +120,10 @@ $(SOURCE_DIR)/FileWriter.h $(SOURCE_DIR)/FileWriter.hh $(SOURCE_DIR)/FileWriter.
$(SOURCE_DIR)/ElementFileWriter.h $(SOURCE_DIR)/ElementFileWriter.cc \
$(SOURCE_DIR)/ElInfo.cc \
$(SOURCE_DIR)/ElInfoStack.h $(SOURCE_DIR)/ElInfoStack.cc \
$(SOURCE_DIR)/OperatorTerm.h $(SOURCE_DIR)/OperatorTerm.cc \
$(SOURCE_DIR)/ZeroOrderTerm.h $(SOURCE_DIR)/ZeroOrderTerm.cc \
$(SOURCE_DIR)/FirstOrderTerm.h $(SOURCE_DIR)/FirstOrderTerm.cc \
$(SOURCE_DIR)/SecondOrderTerm.h $(SOURCE_DIR)/SecondOrderTerm.cc \
$(SOURCE_DIR)/Operator.h $(SOURCE_DIR)/Operator.cc \
$(SOURCE_DIR)/Mesh.cc \
$(SOURCE_DIR)/MeshStructure.h $(SOURCE_DIR)/MeshStructure.cc \
......
AMDiS/bin/Makefile.in
View file @ a547037e
......@@ -154,9 +154,13 @@ am__libamdis_la_SOURCES_DIST = $(SOURCE_DIR)/parallel/StdMpi.h \
$(SOURCE_DIR)/FileWriter.cc $(SOURCE_DIR)/ElementFileWriter.h \
$(SOURCE_DIR)/ElementFileWriter.cc $(SOURCE_DIR)/ElInfo.cc \
$(SOURCE_DIR)/ElInfoStack.h $(SOURCE_DIR)/ElInfoStack.cc \
$(SOURCE_DIR)/Operator.h $(SOURCE_DIR)/Operator.cc \
$(SOURCE_DIR)/Mesh.cc $(SOURCE_DIR)/MeshStructure.h \
$(SOURCE_DIR)/MeshStructure.cc \
$(SOURCE_DIR)/OperatorTerm.h $(SOURCE_DIR)/OperatorTerm.cc \
$(SOURCE_DIR)/ZeroOrderTerm.h $(SOURCE_DIR)/ZeroOrderTerm.cc \
$(SOURCE_DIR)/FirstOrderTerm.h $(SOURCE_DIR)/FirstOrderTerm.cc \
$(SOURCE_DIR)/SecondOrderTerm.h \
$(SOURCE_DIR)/SecondOrderTerm.cc $(SOURCE_DIR)/Operator.h \
$(SOURCE_DIR)/Operator.cc $(SOURCE_DIR)/Mesh.cc \
$(SOURCE_DIR)/MeshStructure.h $(SOURCE_DIR)/MeshStructure.cc \
$(SOURCE_DIR)/MeshStructure_ED.h $(SOURCE_DIR)/AMDiS.h \
$(SOURCE_DIR)/AdaptStationary.h \
$(SOURCE_DIR)/AdaptStationary.cc \
......@@ -271,7 +275,9 @@ am_libamdis_la_OBJECTS = $(am__objects_2) libamdis_la-DOFIndexed.lo \
libamdis_la-BoundaryManager.lo libamdis_la-DirichletBC.lo \
libamdis_la-RobinBC.lo libamdis_la-FileWriter.lo \
libamdis_la-ElementFileWriter.lo libamdis_la-ElInfo.lo \
libamdis_la-ElInfoStack.lo libamdis_la-Operator.lo \
libamdis_la-ElInfoStack.lo libamdis_la-OperatorTerm.lo \
libamdis_la-ZeroOrderTerm.lo libamdis_la-FirstOrderTerm.lo \
libamdis_la-SecondOrderTerm.lo libamdis_la-Operator.lo \
libamdis_la-Mesh.lo libamdis_la-MeshStructure.lo \
libamdis_la-AdaptStationary.lo \
libamdis_la-AdaptInstationary.lo libamdis_la-DOFVector.lo \
......@@ -541,6 +547,10 @@ $(SOURCE_DIR)/FileWriter.h $(SOURCE_DIR)/FileWriter.hh $(SOURCE_DIR)/FileWriter.
$(SOURCE_DIR)/ElementFileWriter.h $(SOURCE_DIR)/ElementFileWriter.cc \
$(SOURCE_DIR)/ElInfo.cc \
$(SOURCE_DIR)/ElInfoStack.h $(SOURCE_DIR)/ElInfoStack.cc \
$(SOURCE_DIR)/OperatorTerm.h $(SOURCE_DIR)/OperatorTerm.cc \
$(SOURCE_DIR)/ZeroOrderTerm.h $(SOURCE_DIR)/ZeroOrderTerm.cc \
$(SOURCE_DIR)/FirstOrderTerm.h $(SOURCE_DIR)/FirstOrderTerm.cc \
$(SOURCE_DIR)/SecondOrderTerm.h $(SOURCE_DIR)/SecondOrderTerm.cc \
$(SOURCE_DIR)/Operator.h $(SOURCE_DIR)/Operator.cc \
$(SOURCE_DIR)/Mesh.cc \
$(SOURCE_DIR)/MeshStructure.h $(SOURCE_DIR)/MeshStructure.cc \
......@@ -772,6 +782,7 @@ distclean-compile:
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libamdis_la-FileWriter.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libamdis_la-FiniteElemSpace.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libamdis_la-FirstOrderAssembler.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libamdis_la-FirstOrderTerm.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libamdis_la-FixVec.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libamdis_la-GNUPlotWriter.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libamdis_la-Global.Plo@am__quote@
......@@ -789,6 +800,7 @@ distclean-compile:
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libamdis_la-MpiHelper.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libamdis_la-NonLinUpdater.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libamdis_la-Operator.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libamdis_la-OperatorTerm.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libamdis_la-ParMetisPartitioner.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libamdis_la-ParallelDomainBase.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libamdis_la-ParallelDomainDbg.Plo@am__quote@
......@@ -820,6 +832,7 @@ distclean-compile:
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libamdis_la-RobinBC.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libamdis_la-ScalableQuadrature.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libamdis_la-SecondOrderAssembler.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libamdis_la-SecondOrderTerm.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libamdis_la-StandardProblemIteration.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libamdis_la-StdMpi.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libamdis_la-SubAssembler.Plo@am__quote@
......@@ -835,6 +848,7 @@ distclean-compile:
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libamdis_la-VertexVector.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libamdis_la-VtkWriter.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libamdis_la-ZeroOrderAssembler.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libamdis_la-ZeroOrderTerm.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libcompositeFEM_la-CFE_Integration.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libcompositeFEM_la-CFE_NormAndErrorFcts.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libcompositeFEM_la-CompositeFEMMethods.Plo@am__quote@
......@@ -1202,6 +1216,34 @@ libamdis_la-ElInfoStack.lo: $(SOURCE_DIR)/ElInfoStack.cc
@AMDEP_TRUE@@am__fastdepCXX_FALSE@ DEPDIR=$(DEPDIR) $(CXXDEPMODE) $(depcomp) @AMDEPBACKSLASH@
@am__fastdepCXX_FALSE@ $(LIBTOOL) --tag=CXX --mode=compile $(CXX) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) $(libamdis_la_CXXFLAGS) $(CXXFLAGS) -c -o libamdis_la-ElInfoStack.lo `test -f '$(SOURCE_DIR)/ElInfoStack.cc' || echo '$(srcdir)/'`$(SOURCE_DIR)/ElInfoStack.cc
libamdis_la-OperatorTerm.lo: $(SOURCE_DIR)/OperatorTerm.cc
@am__fastdepCXX_TRUE@ if $(LIBTOOL) --tag=CXX --mode=compile $(CXX) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) $(libamdis_la_CXXFLAGS) $(CXXFLAGS) -MT libamdis_la-OperatorTerm.lo -MD -MP -MF "$(DEPDIR)/libamdis_la-OperatorTerm.Tpo" -c -o libamdis_la-OperatorTerm.lo `test -f '$(SOURCE_DIR)/OperatorTerm.cc' || echo '$(srcdir)/'`$(SOURCE_DIR)/OperatorTerm.cc; \
@am__fastdepCXX_TRUE@ then mv -f "$(DEPDIR)/libamdis_la-OperatorTerm.Tpo" "$(DEPDIR)/libamdis_la-OperatorTerm.Plo"; else rm -f "$(DEPDIR)/libamdis_la-OperatorTerm.Tpo"; exit 1; fi
@AMDEP_TRUE@@am__fastdepCXX_FALSE@ source='$(SOURCE_DIR)/OperatorTerm.cc' object='libamdis_la-OperatorTerm.lo' libtool=yes @AMDEPBACKSLASH@
@AMDEP_TRUE@@am__fastdepCXX_FALSE@ DEPDIR=$(DEPDIR) $(CXXDEPMODE) $(depcomp) @AMDEPBACKSLASH@
@am__fastdepCXX_FALSE@ $(LIBTOOL) --tag=CXX --mode=compile $(CXX) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) $(libamdis_la_CXXFLAGS) $(CXXFLAGS) -c -o libamdis_la-OperatorTerm.lo `test -f '$(SOURCE_DIR)/OperatorTerm.cc' || echo '$(srcdir)/'`$(SOURCE_DIR)/OperatorTerm.cc
libamdis_la-ZeroOrderTerm.lo: $(SOURCE_DIR)/ZeroOrderTerm.cc
@am__fastdepCXX_TRUE@ if $(LIBTOOL) --tag=CXX --mode=compile $(CXX) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) $(libamdis_la_CXXFLAGS) $(CXXFLAGS) -MT libamdis_la-ZeroOrderTerm.lo -MD -MP -MF "$(DEPDIR)/libamdis_la-ZeroOrderTerm.Tpo" -c -o libamdis_la-ZeroOrderTerm.lo `test -f '$(SOURCE_DIR)/ZeroOrderTerm.cc' || echo '$(srcdir)/'`$(SOURCE_DIR)/ZeroOrderTerm.cc; \
@am__fastdepCXX_TRUE@ then mv -f "$(DEPDIR)/libamdis_la-ZeroOrderTerm.Tpo" "$(DEPDIR)/libamdis_la-ZeroOrderTerm.Plo"; else rm -f "$(DEPDIR)/libamdis_la-ZeroOrderTerm.Tpo"; exit 1; fi
@AMDEP_TRUE@@am__fastdepCXX_FALSE@ source='$(SOURCE_DIR)/ZeroOrderTerm.cc' object='libamdis_la-ZeroOrderTerm.lo' libtool=yes @AMDEPBACKSLASH@
@AMDEP_TRUE@@am__fastdepCXX_FALSE@ DEPDIR=$(DEPDIR) $(CXXDEPMODE) $(depcomp) @AMDEPBACKSLASH@
@am__fastdepCXX_FALSE@ $(LIBTOOL) --tag=CXX --mode=compile $(CXX) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) $(libamdis_la_CXXFLAGS) $(CXXFLAGS) -c -o libamdis_la-ZeroOrderTerm.lo `test -f '$(SOURCE_DIR)/ZeroOrderTerm.cc' || echo '$(srcdir)/'`$(SOURCE_DIR)/ZeroOrderTerm.cc
libamdis_la-FirstOrderTerm.lo: $(SOURCE_DIR)/FirstOrderTerm.cc
@am__fastdepCXX_TRUE@ if $(LIBTOOL) --tag=CXX --mode=compile $(CXX) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) $(libamdis_la_CXXFLAGS) $(CXXFLAGS) -MT libamdis_la-FirstOrderTerm.lo -MD -MP -MF "$(DEPDIR)/libamdis_la-FirstOrderTerm.Tpo" -c -o libamdis_la-FirstOrderTerm.lo `test -f '$(SOURCE_DIR)/FirstOrderTerm.cc' || echo '$(srcdir)/'`$(SOURCE_DIR)/FirstOrderTerm.cc; \
@am__fastdepCXX_TRUE@ then mv -f "$(DEPDIR)/libamdis_la-FirstOrderTerm.Tpo" "$(DEPDIR)/libamdis_la-FirstOrderTerm.Plo"; else rm -f "$(DEPDIR)/libamdis_la-FirstOrderTerm.Tpo"; exit 1; fi
@AMDEP_TRUE@@am__fastdepCXX_FALSE@ source='$(SOURCE_DIR)/FirstOrderTerm.cc' object='libamdis_la-FirstOrderTerm.lo' libtool=yes @AMDEPBACKSLASH@
@AMDEP_TRUE@@am__fastdepCXX_FALSE@ DEPDIR=$(DEPDIR) $(CXXDEPMODE) $(depcomp) @AMDEPBACKSLASH@
@am__fastdepCXX_FALSE@ $(LIBTOOL) --tag=CXX --mode=compile $(CXX) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) $(libamdis_la_CXXFLAGS) $(CXXFLAGS) -c -o libamdis_la-FirstOrderTerm.lo `test -f '$(SOURCE_DIR)/FirstOrderTerm.cc' || echo '$(srcdir)/'`$(SOURCE_DIR)/FirstOrderTerm.cc
libamdis_la-SecondOrderTerm.lo: $(SOURCE_DIR)/SecondOrderTerm.cc
@am__fastdepCXX_TRUE@ if $(LIBTOOL) --tag=CXX --mode=compile $(CXX) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) $(libamdis_la_CXXFLAGS) $(CXXFLAGS) -MT libamdis_la-SecondOrderTerm.lo -MD -MP -MF "$(DEPDIR)/libamdis_la-SecondOrderTerm.Tpo" -c -o libamdis_la-SecondOrderTerm.lo `test -f '$(SOURCE_DIR)/SecondOrderTerm.cc' || echo '$(srcdir)/'`$(SOURCE_DIR)/SecondOrderTerm.cc; \
@am__fastdepCXX_TRUE@ then mv -f "$(DEPDIR)/libamdis_la-SecondOrderTerm.Tpo" "$(DEPDIR)/libamdis_la-SecondOrderTerm.Plo"; else rm -f "$(DEPDIR)/libamdis_la-SecondOrderTerm.Tpo"; exit 1; fi
@AMDEP_TRUE@@am__fastdepCXX_FALSE@ source='$(SOURCE_DIR)/SecondOrderTerm.cc' object='libamdis_la-SecondOrderTerm.lo' libtool=yes @AMDEPBACKSLASH@
@AMDEP_TRUE@@am__fastdepCXX_FALSE@ DEPDIR=$(DEPDIR) $(CXXDEPMODE) $(depcomp) @AMDEPBACKSLASH@
@am__fastdepCXX_FALSE@ $(LIBTOOL) --tag=CXX --mode=compile $(CXX) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) $(libamdis_la_CXXFLAGS) $(CXXFLAGS) -c -o libamdis_la-SecondOrderTerm.lo `test -f '$(SOURCE_DIR)/SecondOrderTerm.cc' || echo '$(srcdir)/'`$(SOURCE_DIR)/SecondOrderTerm.cc
libamdis_la-Operator.lo: $(SOURCE_DIR)/Operator.cc
@am__fastdepCXX_TRUE@ if $(LIBTOOL) --tag=CXX --mode=compile $(CXX) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) $(libamdis_la_CXXFLAGS) $(CXXFLAGS) -MT libamdis_la-Operator.lo -MD -MP -MF "$(DEPDIR)/libamdis_la-Operator.Tpo" -c -o libamdis_la-Operator.lo `test -f '$(SOURCE_DIR)/Operator.cc' || echo '$(srcdir)/'`$(SOURCE_DIR)/Operator.cc; \
@am__fastdepCXX_TRUE@ then mv -f "$(DEPDIR)/libamdis_la-Operator.Tpo" "$(DEPDIR)/libamdis_la-Operator.Plo"; else rm -f "$(DEPDIR)/libamdis_la-Operator.Tpo"; exit 1; fi
......
AMDiS/src/AMDiS.h
View file @ a547037e
......@@ -35,6 +35,7 @@
#include "Estimator.h"
#include "FileWriter.h"
#include "FiniteElemSpace.h"
#include "FirstOrderTerm.h"
#include "FixVec.h"
#include "Flag.h"
#include "Global.h"
......@@ -57,6 +58,7 @@
#include "NonLinUpdater.h"
#include "OEMSolver.h"
#include "Operator.h"
#include "OperatorTerm.h"
#include "Parameters.h"
#include "Parametric.h"
#include "PartitionElementData.h"
......@@ -71,6 +73,7 @@
#include "ProblemInterpolScal.h"
#include "ProblemNonLin.h"
#include "ProblemStatBase.h"
#include "SecondOrderTerm.h"
#include "StandardProblemIteration.h"
#include "Projection.h"
#include "QPsiPhi.h"
......@@ -92,6 +95,7 @@
#include "Triangle.h"
#include "ValueWriter.h"
#include "VtkWriter.h"
#include "ZeroOrderTerm.h"
#if HAVE_PARALLEL_DOMAIN_AMDIS
#include "parallel/InteriorBoundary.h"
......
AMDiS/src/FirstOrderTerm.cc 0 → 100644
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AMDiS/src/FirstOrderTerm.h 0 → 100644
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AMDiS/src/Operator.cc
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AMDiS/src/Operator.h
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AMDiS/src/OperatorTerm.cc 0 → 100644
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AMDiS/src/OperatorTerm.h 0 → 100644
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AMDiS/src/SecondOrderTerm.cc 0 → 100644
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AMDiS/src/SecondOrderTerm.h 0 → 100644
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AMDiS/src/ZeroOrderTerm.cc 0 → 100644
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AMDiS/src/ZeroOrderTerm.h 0 → 100644
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