Skip to content

GitLab

Commit d2cd8700 authored by Peter Gottschling's avatar Peter Gottschling
Browse files

Größter Merge in der Geschichte von AMDiS. Mit Thomas' Beteiligung.

parent 37ff8894
Expand all Hide whitespace changes
Inline Side-by-side
AMDiS/Makefile.in
View file @ d2cd8700
......@@ -139,6 +139,7 @@ PACKAGE_TARNAME = @PACKAGE_TARNAME@
PACKAGE_VERSION = @PACKAGE_VERSION@
PATH_SEPARATOR = @PATH_SEPARATOR@
RANLIB = @RANLIB@
SED = @SED@
SET_MAKE = @SET_MAKE@
SHELL = @SHELL@
STRIP = @STRIP@
......
AMDiS/aclocal.m4
View file @ d2cd8700
......@@ -1578,10 +1578,27 @@ linux*)
# before this can be enabled.
hardcode_into_libs=yes
# find out which ABI we are using
libsuff=
case "$host_cpu" in
x86_64*|s390x*|powerpc64*)
echo '[#]line __oline__ "configure"' > conftest.$ac_ext
if AC_TRY_EVAL(ac_compile); then
case `/usr/bin/file conftest.$ac_objext` in
*64-bit*)
libsuff=64
sys_lib_search_path_spec="/lib${libsuff} /usr/lib${libsuff} /usr/local/lib${libsuff}"
;;
esac
fi
rm -rf conftest*
;;
esac
# Append ld.so.conf contents to the search path
if test -f /etc/ld.so.conf; then
lt_ld_extra=`awk '/^include / { system(sprintf("cd /etc; cat %s", \[$]2)); skip = 1; } { if (!skip) print \[$]0; skip = 0; }' < /etc/ld.so.conf | $SED -e 's/#.*//;s/[:, ]/ /g;s/=[^=]*$//;s/=[^= ]* / /g;/^$/d' | tr '\n' ' '`
sys_lib_dlsearch_path_spec="/lib /usr/lib $lt_ld_extra"
lt_ld_extra=`awk '/^include / { system(sprintf("cd /etc; cat %s 2>/dev/null", \[$]2)); skip = 1; } { if (!skip) print \[$]0; skip = 0; }' < /etc/ld.so.conf | $SED -e 's/#.*//;s/[:, ]/ /g;s/=[^=]*$//;s/=[^= ]* / /g;/^$/d' | tr '\n' ' '`
sys_lib_dlsearch_path_spec="/lib${libsuff} /usr/lib${libsuff} $lt_ld_extra"
fi
# We used to test for /lib/ld.so.1 and disable shared libraries on
......@@ -4288,6 +4305,9 @@ CC=$lt_[]_LT_AC_TAGVAR(compiler, $1)
# Is the compiler the GNU C compiler?
with_gcc=$_LT_AC_TAGVAR(GCC, $1)
gcc_dir=\`gcc -print-file-name=. | $SED 's,/\.$,,'\`
gcc_ver=\`gcc -dumpversion\`
# An ERE matcher.
EGREP=$lt_EGREP
......@@ -4421,11 +4441,11 @@ striplib=$lt_striplib
# Dependencies to place before the objects being linked to create a
# shared library.
predep_objects=$lt_[]_LT_AC_TAGVAR(predep_objects, $1)
predep_objects=\`echo $lt_[]_LT_AC_TAGVAR(predep_objects, $1) | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\`
# Dependencies to place after the objects being linked to create a
# shared library.
postdep_objects=$lt_[]_LT_AC_TAGVAR(postdep_objects, $1)
postdep_objects=\`echo $lt_[]_LT_AC_TAGVAR(postdep_objects, $1) | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\`
# Dependencies to place before the objects being linked to create a
# shared library.
......@@ -4437,7 +4457,7 @@ postdeps=$lt_[]_LT_AC_TAGVAR(postdeps, $1)
# The library search path used internally by the compiler when linking
# a shared library.
compiler_lib_search_path=$lt_[]_LT_AC_TAGVAR(compiler_lib_search_path, $1)
compiler_lib_search_path=\`echo $lt_[]_LT_AC_TAGVAR(compiler_lib_search_path, $1) | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\`
# Method to check whether dependent libraries are shared objects.
deplibs_check_method=$lt_deplibs_check_method
......@@ -4517,7 +4537,7 @@ variables_saved_for_relink="$variables_saved_for_relink"
link_all_deplibs=$_LT_AC_TAGVAR(link_all_deplibs, $1)
# Compile-time system search path for libraries
sys_lib_search_path_spec=$lt_sys_lib_search_path_spec
sys_lib_search_path_spec=\`echo $lt_sys_lib_search_path_spec | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\`
# Run-time system search path for libraries
sys_lib_dlsearch_path_spec=$lt_sys_lib_dlsearch_path_spec
......@@ -6353,6 +6373,7 @@ do
done
done
done
IFS=$as_save_IFS
lt_ac_max=0
lt_ac_count=0
# Add /usr/xpg4/bin/sed as it is typically found on Solaris
......@@ -6385,6 +6406,7 @@ for lt_ac_sed in $lt_ac_sed_list /usr/xpg4/bin/sed; do
done
])
SED=$lt_cv_path_SED
AC_SUBST([SED])
AC_MSG_RESULT([$SED])
])
......
AMDiS/autogen.sh 0 → 100755
View file @ d2cd8700
#!/bin/sh
echo "--> Running aclocal"
aclocal
if test "$?" != "0" ; then
echo "*** aclocal failed"
exit 1
fi
if test "`grep AC_CONFIG_HEADER configure.ac`" != "" -o \
"`grep AM_CONFIG_HEADER configure.ac`" != "" ; then
# if we use CONFIG_HEADER, then make sure to run autoheader
echo "--> Running autoheader"
autoheader
if test "$?" != "0" ; then
echo "*** autoheader failed"
exit 1
fi
else
echo "--> autoheader not needed"
fi
echo "--> Running autoconf"
autoconf
if test "$?" != "0" ; then
echo "*** autoconf failed"
exit 1
fi
echo "--> Running libtoolize"
libtoolize --automake --copy
if test "$?" != "0" ; then
echo "*** libtoolize failed"
exit 1
fi
echo "--> Running automake"
automake -a --copy --include-deps
if test "$?" != "0" ; then
echo "*** automake failed"
exit 1
fi
echo;
echo "Running ./configure $@"
echo;
./configure $@
AMDiS/bin/Makefile.am
View file @ d2cd8700
......@@ -33,7 +33,7 @@ if USE_PARALLEL_AMDIS
endif
if ENABLE_UMFPACK
libamdis_la_CXXFLAGS += -DHAVE_UMFPACK=1
libamdis_la_CXXFLAGS += -DHAVE_UMFPACK=1 -DMTL_HAS_UMFPACK
AMDIS_INCLUDES += -I$(LIB_DIR)/UFconfig \
-I$(LIB_DIR)/AMD/Include \
-I$(LIB_DIR)/UMFPACK/Include
......@@ -52,12 +52,14 @@ if ENABLE_BOOST
libamdis_la_CXXFLAGS += -DHAVE_BOOST=1
endif
INCLUDES = $(AMDIS_INCLUDES) $(PARALLEL_INCLUDES)
TEMPLATE_INCLUDES = -I../lib/mtl4 -I../lib/boost_1_34_1
INCLUDES = $(AMDIS_INCLUDES) $(PARALLEL_INCLUDES) $(TEMPLATE_INCLUDES)
if AMDIS_DEBUG
libamdis_la_CXXFLAGS += -g -O0 -Wall -DDEBUG=1 $(OPENMP_FLAG) -ftemplate-depth-30 $(INCLUDES) #-pedantic
libamdis_la_CXXFLAGS += -g -O0 -Wall -DDEBUG=1 $(OPENMP_FLAG) $(INCLUDES) #-pedantic
else
libamdis_la_CXXFLAGS += -O2 -Wall -DDEBUG=0 $(OPENMP_FLAG) -ftemplate-depth-30 $(INCLUDES) #-pedantic
libamdis_la_CXXFLAGS += -O2 -Wall -DDEBUG=0 -DNDEBUG $(OPENMP_FLAG) -ftemplate-depth-100 $(INCLUDES) #-pedantic
endif
......@@ -65,14 +67,10 @@ libamdis_la_SOURCES = \
$(PARALLEL_AMDIS_SOURCES) \
$(SOURCE_DIR)/MultiGridPreconWrapper.h $(SOURCE_DIR)/MultiGridPreconWrapper.cc \
$(SOURCE_DIR)/LagrangeInterpolRestrict.h \
$(SOURCE_DIR)/BiCGStab.h $(SOURCE_DIR)/BiCGStab.hh \
$(SOURCE_DIR)/BiCGStab2.h $(SOURCE_DIR)/BiCGStab2.hh \
$(SOURCE_DIR)/InterpolRestrictMatrix.h $(SOURCE_DIR)/InterpolRestrictMatrix.cc \
$(SOURCE_DIR)/DOFIndexed.h $(SOURCE_DIR)/DOFIndexed.cc \
$(SOURCE_DIR)/GNUPlotWriter.h $(SOURCE_DIR)/GNUPlotWriter.cc \
$(SOURCE_DIR)/SmootherBase.h \
$(SOURCE_DIR)/StlVector.h $(SOURCE_DIR)/StlVector.cc \
$(SOURCE_DIR)/V3Vector.h $(SOURCE_DIR)/V3Vector.cc \
$(SOURCE_DIR)/GSSMoother.h $(SOURCE_DIR)/GSSmoother.cc \
$(SOURCE_DIR)/JacobiSMoother.h $(SOURCE_DIR)/JacobiSmoother.cc \
$(SOURCE_DIR)/SparseVector.h $(SOURCE_DIR)/SparseVector.hh $(SOURCE_DIR)/SparseVector.cc \
......@@ -130,50 +128,22 @@ $(SOURCE_DIR)/AdaptStationary.h $(SOURCE_DIR)/AdaptStationary.cc \
$(SOURCE_DIR)/AdaptInstationary.h $(SOURCE_DIR)/AdaptInstationary.cc \
$(SOURCE_DIR)/QPsiPhi.h \
$(SOURCE_DIR)/BasisFunction.h \
$(SOURCE_DIR)/BiCGSolver.h $(SOURCE_DIR)/BiCGSolver.hh \
$(SOURCE_DIR)/Boundary.h \
$(SOURCE_DIR)/CGSolver.h $(SOURCE_DIR)/CGSolver.hh \
$(SOURCE_DIR)/ITL_Solver.h \
$(SOURCE_DIR)/CoarseningManager.h \
$(SOURCE_DIR)/CoarseningManager1d.h $(SOURCE_DIR)/CoarseningManager2d.h $(SOURCE_DIR)/CoarseningManager3d.h \
$(SOURCE_DIR)/demangle.h \
$(SOURCE_DIR)/DiagonalPreconditioner.h $(SOURCE_DIR)/DiagonalPreconditioner.cc \
$(SOURCE_DIR)/ILUPreconditioner.h $(SOURCE_DIR)/ILUPreconditioner.cc \
$(SOURCE_DIR)/ILUTPreconditioner.h $(SOURCE_DIR)/ILUTPreconditioner.cc \
$(SOURCE_DIR)/QN_Precond.h $(SOURCE_DIR)/QN_Precond.hh \
$(SOURCE_DIR)/BFGS_Precond.h $(SOURCE_DIR)/BFGS_Precond.cc \
$(SOURCE_DIR)/DOFAdmin.h \
$(SOURCE_DIR)/DOFIterator.h \
$(SOURCE_DIR)/DOFMatrix.h \
$(SOURCE_DIR)/DOFVector.h $(SOURCE_DIR)/DOFVector.hh $(SOURCE_DIR)/DOFVector.cc \
$(SOURCE_DIR)/Element.h $(SOURCE_DIR)/ElementConnection.h \
$(SOURCE_DIR)/ElInfo.h $(SOURCE_DIR)/ElInfo1d.h $(SOURCE_DIR)/ElInfo2d.h $(SOURCE_DIR)/ElInfo3d.h \
$(SOURCE_DIR)/Error.h $(SOURCE_DIR)/Error.hh \
$(SOURCE_DIR)/Estimator.h $(SOURCE_DIR)/Estimator.cc \
$(SOURCE_DIR)/ResidualEstimator.h $(SOURCE_DIR)/ResidualEstimator.cc \
$(SOURCE_DIR)/ResidualParallelEstimator.h $(SOURCE_DIR)/ResidualParallelEstimator.cc \
$(SOURCE_DIR)/FiniteElemSpace.h \
$(SOURCE_DIR)/FixVec.h $(SOURCE_DIR)/FixVec.hh \
$(SOURCE_DIR)/FixVecConvert.h \
$(SOURCE_DIR)/Flag.h \
$(SOURCE_DIR)/Global.h \
$(SOURCE_DIR)/GMResSolver.h $(SOURCE_DIR)/GMResSolver.hh \
$(SOURCE_DIR)/GMResSolver2.h $(SOURCE_DIR)/GMResSolver2.hh \
$(SOURCE_DIR)/TFQMR.h $(SOURCE_DIR)/TFQMR.hh \
$(SOURCE_DIR)/VecSymSolver.h $(SOURCE_DIR)/VecSymSolver.hh \
$(SOURCE_DIR)/UmfPackSolver.h $(SOURCE_DIR)/UmfPackSolver.hh \
$(SOURCE_DIR)/PardisoSolver.h $(SOURCE_DIR)/PardisoSolver.hh $(SOURCE_DIR)/PardisoSolver.cc \
$(SOURCE_DIR)/DuneSolver.h $(SOURCE_DIR)/DuneSolver.hh $(SOURCE_DIR)/DuneSolver.cc \
$(SOURCE_DIR)/DOFAdmin.h $(SOURCE_DIR)/DOFIterator.h $(SOURCE_DIR)/DOFMatrix.h $(SOURCE_DIR)/DOFVector.h $(SOURCE_DIR)/DOFVector.hh $(SOURCE_DIR)/DOFVector.cc $(SOURCE_DIR)/Element.h $(SOURCE_DIR)/ElementConnection.h \
$(SOURCE_DIR)/ElInfo.h $(SOURCE_DIR)/ElInfo1d.h $(SOURCE_DIR)/ElInfo2d.h $(SOURCE_DIR)/ElInfo3d.h $(SOURCE_DIR)/Error.h \
$(SOURCE_DIR)/Error.hh $(SOURCE_DIR)/Estimator.h $(SOURCE_DIR)/Estimator.cc $(SOURCE_DIR)/FiniteElemSpace.h $(SOURCE_DIR)/FixVec.h $(SOURCE_DIR)/FixVec.hh $(SOURCE_DIR)/FixVecConvert.h $(SOURCE_DIR)/Flag.h $(SOURCE_DIR)/Global.h \
$(SOURCE_DIR)/UmfPackSolver.h \ $(SOURCE_DIR)/UmfPackSolver.hh \
$(SOURCE_DIR)/Lagrange.h $(SOURCE_DIR)/Line.h \
$(SOURCE_DIR)/MacroElement.h $(SOURCE_DIR)/MacroWriter.h \
$(SOURCE_DIR)/Markings.h $(SOURCE_DIR)/Markings.hh \
$(SOURCE_DIR)/MemoryManager.h \
$(SOURCE_DIR)/Mesh.h \
$(SOURCE_DIR)/ODirSolver.h $(SOURCE_DIR)/ODirSolver.hh \
$(SOURCE_DIR)/OEMSolver.h $(SOURCE_DIR)/OEMSolver.hh \
$(SOURCE_DIR)/OResSolver.h $(SOURCE_DIR)/OResSolver.hh \
$(SOURCE_DIR)/Parameters.h \
$(SOURCE_DIR)/Parametric.h \
$(SOURCE_DIR)/Preconditioner.h \
$(SOURCE_DIR)/Quadrature.h \
$(SOURCE_DIR)/RCNeighbourList.h \
$(SOURCE_DIRe)/RefinementManager.h \
......
AMDiS/bin/Makefile.in
View file @ d2cd8700
This diff is collapsed.
AMDiS/configure
View file @ d2cd8700
This diff is collapsed.
AMDiS/libtool
View file @ d2cd8700
......@@ -44,7 +44,7 @@ available_tags=" CXX F77"
# ### BEGIN LIBTOOL CONFIG
# Libtool was configured on host NWRW15:
# Libtool was configured on host NWRW03:
# Shell to use when invoking shell scripts.
SHELL="/bin/sh"
......@@ -93,6 +93,9 @@ CC="gcc"
# Is the compiler the GNU C compiler?
with_gcc=yes
gcc_dir=`gcc -print-file-name=. | /bin/sed 's,/\.$,,'`
gcc_ver=`gcc -dumpversion`
# An ERE matcher.
EGREP="grep -E"
......@@ -229,11 +232,11 @@ striplib="strip --strip-unneeded"
# Dependencies to place before the objects being linked to create a
# shared library.
predep_objects=""
predep_objects=`echo "" | $SED -e "s@${gcc_dir}@\${gcc_dir}@g;s@${gcc_ver}@\${gcc_ver}@g"`
# Dependencies to place after the objects being linked to create a
# shared library.
postdep_objects=""
postdep_objects=`echo "" | $SED -e "s@${gcc_dir}@\${gcc_dir}@g;s@${gcc_ver}@\${gcc_ver}@g"`
# Dependencies to place before the objects being linked to create a
# shared library.
......@@ -245,7 +248,7 @@ postdeps=""
# The library search path used internally by the compiler when linking
# a shared library.
compiler_lib_search_path=""
compiler_lib_search_path=`echo "" | $SED -e "s@${gcc_dir}@\${gcc_dir}@g;s@${gcc_ver}@\${gcc_ver}@g"`
# Method to check whether dependent libraries are shared objects.
deplibs_check_method="pass_all"
......@@ -325,10 +328,10 @@ variables_saved_for_relink="PATH LD_LIBRARY_PATH LD_RUN_PATH GCC_EXEC_PREFIX COM
link_all_deplibs=unknown
# Compile-time system search path for libraries
sys_lib_search_path_spec=" /usr/lib/gcc/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../../i386-redhat-linux/lib/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../../i386-redhat-linux/lib/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../ /lib/i386-redhat-linux/4.1.2/ /lib/ /usr/lib/i386-redhat-linux/4.1.2/ /usr/lib/"
sys_lib_search_path_spec=`echo " /usr/lib/gcc/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../../i386-redhat-linux/lib/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../../i386-redhat-linux/lib/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../ /lib/i386-redhat-linux/4.1.2/ /lib/ /usr/lib/i386-redhat-linux/4.1.2/ /usr/lib/" | $SED -e "s@${gcc_dir}@\${gcc_dir}@g;s@${gcc_ver}@\${gcc_ver}@g"`
# Run-time system search path for libraries
sys_lib_dlsearch_path_spec="/lib /usr/lib /usr/lib/octave-2.9.9 /usr/lib/qt-3.3/lib "
sys_lib_dlsearch_path_spec="/lib /usr/lib /usr/lib/octave-3.0.1 /usr/lib/qt-3.3/lib "
# Fix the shell variable $srcfile for the compiler.
fix_srcfile_path=""
......@@ -6760,7 +6763,7 @@ build_old_libs=`case $build_libtool_libs in yes) $echo no;; *) $echo yes;; esac`
# End:
# ### BEGIN LIBTOOL TAG CONFIG: CXX
# Libtool was configured on host NWRW15:
# Libtool was configured on host NWRW03:
# Shell to use when invoking shell scripts.
SHELL="/bin/sh"
......@@ -6809,6 +6812,9 @@ CC="g++"
# Is the compiler the GNU C compiler?
with_gcc=yes
gcc_dir=`gcc -print-file-name=. | /bin/sed 's,/\.$,,'`
gcc_ver=`gcc -dumpversion`
# An ERE matcher.
EGREP="grep -E"
......@@ -6942,11 +6948,11 @@ striplib="strip --strip-unneeded"
# Dependencies to place before the objects being linked to create a
# shared library.
predep_objects="/usr/lib/gcc/i386-redhat-linux/4.1.2/../../../crti.o /usr/lib/gcc/i386-redhat-linux/4.1.2/crtbeginS.o"
predep_objects=`echo "/usr/lib/gcc/i386-redhat-linux/4.1.2/../../../crti.o /usr/lib/gcc/i386-redhat-linux/4.1.2/crtbeginS.o" | $SED -e "s@${gcc_dir}@\${gcc_dir}@g;s@${gcc_ver}@\${gcc_ver}@g"`
# Dependencies to place after the objects being linked to create a
# shared library.
postdep_objects="/usr/lib/gcc/i386-redhat-linux/4.1.2/crtendS.o /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../crtn.o"
postdep_objects=`echo "/usr/lib/gcc/i386-redhat-linux/4.1.2/crtendS.o /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../crtn.o" | $SED -e "s@${gcc_dir}@\${gcc_dir}@g;s@${gcc_ver}@\${gcc_ver}@g"`
# Dependencies to place before the objects being linked to create a
# shared library.
......@@ -6958,7 +6964,7 @@ postdeps="-lstdc++ -lm -lgcc_s -lc -lgcc_s"
# The library search path used internally by the compiler when linking
# a shared library.
compiler_lib_search_path="-L/usr/lib/gcc/i386-redhat-linux/4.1.2 -L/usr/lib/gcc/i386-redhat-linux/4.1.2 -L/usr/lib/gcc/i386-redhat-linux/4.1.2/../../.."
compiler_lib_search_path=`echo "-L/usr/lib/gcc/i386-redhat-linux/4.1.2 -L/usr/lib/gcc/i386-redhat-linux/4.1.2 -L/usr/lib/gcc/i386-redhat-linux/4.1.2/../../.." | $SED -e "s@${gcc_dir}@\${gcc_dir}@g;s@${gcc_ver}@\${gcc_ver}@g"`
# Method to check whether dependent libraries are shared objects.
deplibs_check_method="pass_all"
......@@ -7038,10 +7044,10 @@ variables_saved_for_relink="PATH LD_LIBRARY_PATH LD_RUN_PATH GCC_EXEC_PREFIX COM
link_all_deplibs=unknown
# Compile-time system search path for libraries
sys_lib_search_path_spec=" /usr/lib/gcc/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../../i386-redhat-linux/lib/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../../i386-redhat-linux/lib/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../ /lib/i386-redhat-linux/4.1.2/ /lib/ /usr/lib/i386-redhat-linux/4.1.2/ /usr/lib/"
sys_lib_search_path_spec=`echo " /usr/lib/gcc/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../../i386-redhat-linux/lib/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../../i386-redhat-linux/lib/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../ /lib/i386-redhat-linux/4.1.2/ /lib/ /usr/lib/i386-redhat-linux/4.1.2/ /usr/lib/" | $SED -e "s@${gcc_dir}@\${gcc_dir}@g;s@${gcc_ver}@\${gcc_ver}@g"`
# Run-time system search path for libraries
sys_lib_dlsearch_path_spec="/lib /usr/lib /usr/lib/octave-2.9.9 /usr/lib/qt-3.3/lib "
sys_lib_dlsearch_path_spec="/lib /usr/lib /usr/lib/octave-3.0.1 /usr/lib/qt-3.3/lib "
# Fix the shell variable $srcfile for the compiler.
fix_srcfile_path=""
......@@ -7065,7 +7071,7 @@ include_expsyms=""
# ### BEGIN LIBTOOL TAG CONFIG: F77
# Libtool was configured on host NWRW15:
# Libtool was configured on host NWRW03:
# Shell to use when invoking shell scripts.
SHELL="/bin/sh"
......@@ -7109,11 +7115,14 @@ LTCC="gcc"
LTCFLAGS="-g -O2"
# A language-specific compiler.
CC="g77"
CC="f95"
# Is the compiler the GNU C compiler?
with_gcc=yes
gcc_dir=`gcc -print-file-name=. | /bin/sed 's,/\.$,,'`
gcc_ver=`gcc -dumpversion`
# An ERE matcher.
EGREP="grep -E"
......@@ -7250,11 +7259,11 @@ striplib="strip --strip-unneeded"
# Dependencies to place before the objects being linked to create a
# shared library.
predep_objects=""
predep_objects=`echo "" | $SED -e "s@${gcc_dir}@\${gcc_dir}@g;s@${gcc_ver}@\${gcc_ver}@g"`
# Dependencies to place after the objects being linked to create a
# shared library.
postdep_objects=""
postdep_objects=`echo "" | $SED -e "s@${gcc_dir}@\${gcc_dir}@g;s@${gcc_ver}@\${gcc_ver}@g"`
# Dependencies to place before the objects being linked to create a
# shared library.
......@@ -7266,7 +7275,7 @@ postdeps=""
# The library search path used internally by the compiler when linking
# a shared library.
compiler_lib_search_path=""
compiler_lib_search_path=`echo "" | $SED -e "s@${gcc_dir}@\${gcc_dir}@g;s@${gcc_ver}@\${gcc_ver}@g"`
# Method to check whether dependent libraries are shared objects.
deplibs_check_method="pass_all"
......@@ -7346,10 +7355,10 @@ variables_saved_for_relink="PATH LD_LIBRARY_PATH LD_RUN_PATH GCC_EXEC_PREFIX COM
link_all_deplibs=unknown
# Compile-time system search path for libraries
sys_lib_search_path_spec=" /usr/lib/gcc/i386-redhat-linux/3.4.6/ /usr/lib/gcc/i386-redhat-linux/3.4.6/ /usr/lib/gcc/i386-redhat-linux/3.4.6/../../../../i386-redhat-linux/lib/i386-redhat-linux/3.4.6/ /usr/lib/gcc/i386-redhat-linux/3.4.6/../../../../i386-redhat-linux/lib/ /usr/lib/gcc/i386-redhat-linux/3.4.6/../../../i386-redhat-linux/3.4.6/ /usr/lib/gcc/i386-redhat-linux/3.4.6/../../../ /lib/i386-redhat-linux/3.4.6/ /lib/ /usr/lib/i386-redhat-linux/3.4.6/ /usr/lib/"
sys_lib_search_path_spec=`echo " /usr/lib/gcc/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../../i386-redhat-linux/lib/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../../i386-redhat-linux/lib/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../ /lib/i386-redhat-linux/4.1.2/ /lib/ /usr/lib/i386-redhat-linux/4.1.2/ /usr/lib/" | $SED -e "s@${gcc_dir}@\${gcc_dir}@g;s@${gcc_ver}@\${gcc_ver}@g"`
# Run-time system search path for libraries
sys_lib_dlsearch_path_spec="/lib /usr/lib /usr/lib/octave-2.9.9 /usr/lib/qt-3.3/lib "
sys_lib_dlsearch_path_spec="/lib /usr/lib /usr/lib/octave-3.0.1 /usr/lib/qt-3.3/lib "
# Fix the shell variable $srcfile for the compiler.
fix_srcfile_path=""
......
AMDiS/src/AMDiS.h
View file @ d2cd8700
......@@ -6,13 +6,10 @@
#include "AdaptStationary.h"
#include "Assembler.h"
#include "BasisFunction.h"
#include "BiCGSolver.h"
#include "Boundary.h"
#include "BiCGStab_M.h"
#include "Boundary.h"
#include "BoundaryCondition.h"
#include "BoundaryManager.h"
#include "CGSolver.h"
#include "CoarseningManager.h"
#include "CoarseningManager1d.h"
#include "CoarseningManager2d.h"
......@@ -25,7 +22,6 @@
#include "DOFIterator.h"
#include "DOFMatrix.h"
#include "DOFVector.h"
#include "DiagonalPreconditioner.h"
#include "DirichletBC.h"
#include "DualTraverse.h"
#include "ElInfo.h"
......@@ -41,10 +37,11 @@
#include "FiniteElemSpace.h"
#include "FixVec.h"
#include "Flag.h"
#include "GMResSolver.h"
#include "Global.h"
#include "GridWriter.h"
#include "InteriorBoundary.h"
#include "ITL_Preconditioner.h"
#include "ITL_Solver.h"
#include "Lagrange.h"
#include "LeafData.h"
#include "Line.h"
......@@ -61,9 +58,7 @@
#include "NewtonS.h"
#include "NonLinSolver.h"
#include "NonLinUpdater.h"
#include "ODirSolver.h"
#include "OEMSolver.h"
#include "OResSolver.h"
#include "Operator.h"
#include "Parameters.h"
#include "Parametric.h"
......@@ -71,7 +66,6 @@
#include "PeriodicMap.h"
#include "PeriodicBC.h"
#include "PngWriter.h"
#include "Preconditioner.h"
#include "ProblemScal.h"
#include "ProblemVec.h"
#include "ProblemInstat.h"
......
AMDiS/src/ODirSolver.h → AMDiS/src/AMDiS_fwd.h
View file @ d2cd8700
......@@ -17,85 +17,66 @@
// == ==
// ============================================================================
/** \file ODirSolver.h */
/** \file AMDiS_fwd.h */
#ifndef AMDIS_ODIRSOLVER_H
#define AMDIS_ODIRSOLVER_H
#include "OEMSolver.h"
#include "MemoryManager.h"
#ifndef AMDIS_AMDIS_FWD_INCLUDE
#define AMDIS_AMDIS_FWD_INCLUDE
namespace AMDiS {
// ============================================================================
// ===== class BiCGSolver =====================================================
// ============================================================================
/**
* \ingroup Solver
*
* \brief
* Solves a linear system by the method of orthogonal directions and can be
* used for symmetric positive system matrices.
*/
template<typename VectorType>
class ODirSolver : public OEMSolver<VectorType>
{
public:
MEMORY_MANAGED(ODirSolver<VectorType>);
/** \brief
* Creator class used in the OEMSolverMap.
*/
class Creator : public OEMSolverCreator<VectorType>
{
public:
MEMORY_MANAGED(Creator);
virtual ~Creator() {};
/** \brief
* Returns a new ODirSolver object.
*/
OEMSolver<VectorType>* create() {
return NEW ODirSolver<VectorType>(this->name);
};
};
/** \brief
* constructor
*/
ODirSolver(std::string name);
/** \brief
* destructor
*/
~ODirSolver();
protected:
/** \brief
* realisation of OEMSolver::solveSystem
*/
int solveSystem(MatVecMultiplier<VectorType> *mv,
VectorType *x, VectorType *b, bool reuseMatrix);
/** \brief
* realisation of OEMSolver::init
*/
void init();
/** \brief
* realisation of OEMSolver::exit
*/
void exit();
private:
// pointer to memory needed for solveSystem
VectorType *Ad, *d, *d_old, *r, *h;
};
}
#include "ODirSolver.hh"
#endif // AMDIS_ODIR_SOLVER_H
class AdaptInfo;
class AdaptStationary;
class BasisFunction;
class BoundaryManager;
class CGSolver;
class CoarseningManager;
class DiagonalPreconditioner;
class DOFAdmin;
class DOFMatrix;
class Element;
class ElementMatrix;
class ElementVector;
class ElInfo;
class Estimator;
class FastQuadrature;
class FillInfo;
class FileWriterInterface;
class FiniteElemSpace;
class IdentityPreconditioner;
class InterpolRestrictMatrix;
class ITL_BasePreconditioner;
class LeafDataPeriodic;
class LevelAdmin;
class Marker;
class Mesh;
class MultiGridSortSolver;
class OEMSolver;
class Operator;
class ProblemInstat;
class ProblemIterationInterface;
class ProblemVec;
class PreconditionerScal;
class Quadrature;
class RCNeighbourList;
class RefinementManager;
class RobinBC;
class SystemVector;
class VertexVector;
template<typename ReturnType, typename ArgumentType> class AbstractFunction;
template<typename VectorType> class MatVecMultiplier;
template<typename T> class DOFVectorBase;
template<typename T> class DOFVector;
template<typename T> class ITL_Preconditioner;
template<typename T> class Matrix;
template<typename T> class MatVecMultiplier;
template<typename T> class SolverMatrix;
template<typename T> class SparseVector;
template<typename T> class Vector;
template <typename ITLSolver> class ITL_OEMSolver;
} // namespace AMDiS
#endif // AMDIS_AMDIS_FWD_INCLUDE
AMDiS/src/AdaptStationary.h
View file @ d2cd8700
......@@ -34,13 +34,10 @@
#include "MemoryManager.h"
#include "AdaptInfo.h"
#include "AdaptBase.h"
#include "AMDiS_fwd.h"
namespace AMDiS {
class Element;
template <typename T> class OEMSolver;
class ProblemIterationInterface;
// ============================================================================
// ===== class AdaptStationary ================================================
// ============================================================================
......
AMDiS/src/BFGS_Precond.cc deleted 100755 → 0
View file @ 37ff8894
#include "BFGS_Precond.h"
#include "QN_Precond.h"
#include "FiniteElemSpace.h"
#include "DOFAdmin.h"
#include "DOFVector.h"
#include "DOFMatrix.h"
#include "DOFIterator.h"
namespace AMDiS
{