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iwr
amdis
Commits
0abb9f24
Commit
0abb9f24
authored
May 19, 2010
by
Naumann, Andreas
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cmake port of current amdis
parent
62f429c1
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AMDiS/CMakeLists.txt
AMDiS/CMakeLists.txt
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AMDiS/CMakeLists.txt
0 → 100644
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0abb9f24
project
(
"AMDiS"
)
cmake_minimum_required
(
VERSION 2.6
)
#needs: --enable-debug, enable-intel --enable-openmp --enable-parmetis --enable-parallel-domain --enable-umfpack --enable-mkl --enable-boost --enable-marmot
option
(
ENABLE_DEBUG
"debug"
false
)
#option(ENABLE_INTEL "use intel compiler" false)
option
(
ENABLE_OPENMP
"use openmp"
false
)
option
(
ENABLE_PARMETIS
"use partion of unity and enable parmetis"
false
)
option
(
ENABLE_PARALLEL_DOMAIN
"use parallel domain decomposition"
false
)
SET
(
PETSC_DIR
""
CACHE STRING
"Petsc directory for parallel domain decomposition"
)
SET
(
PETSC_ARCH
""
CACHE STRING
"Petsc architecture"
)
option
(
ENABLE_UMFPACK
"use umfpack solver"
false
)
option
(
ENABLE_MKL
"use the mkl"
false
)
SET
(
MKL_DIR
""
CACHE STRING
"MKL directory"
)
option
(
ENABLE_DUNE
"use dune"
false
)
SET
(
DUNE_DIR
""
CACHE STRING
"Dune directory"
)
option
(
ENABLE_BOOST
"use the boost library"
false
)
option
(
ENABLE_MARMOT
"use marmot"
false
)
option
(
ENABLE_GUI
"compile the gui"
false
)
#option(ENABLE_TESTS "compile the tests" false)
SET
(
ENABLE_TESTS false
)
if
(
ENABLE_INTEL
)
Message
(
"please set the icc manually"
)
INCLUDE
(
CMakeForceCompiler
)
CMAKE_FORCE_C_COMPILER
(
icc
"intel C compiler"
)
CMAKE_FORCE_CXX_COMPILER
(
icpc
"intel C++ compiler"
)
#SET(CMAKE_C_COMPILER "icc")
endif
(
ENABLE_INTEL
)
SET
(
LIB_DIR ./lib
)
SET
(
SOURCE_DIR ./src
)
SET
(
AMDIS_SRC
${
SOURCE_DIR
}
/DOFIndexed.cc
${
SOURCE_DIR
}
/GNUPlotWriter.cc
${
SOURCE_DIR
}
/VertexVector.cc
${
SOURCE_DIR
}
/PeriodicBC.cc
${
SOURCE_DIR
}
/Recovery.cc
${
SOURCE_DIR
}
/RecoveryEstimator.cc
${
SOURCE_DIR
}
/ResidualEstimator.cc
${
SOURCE_DIR
}
/Cholesky.cc
${
SOURCE_DIR
}
/AdaptBase.cc
${
SOURCE_DIR
}
/StandardProblemIteration.cc
${
SOURCE_DIR
}
/ProblemScal.cc
${
SOURCE_DIR
}
/ProblemVec.cc
${
SOURCE_DIR
}
/ProblemVecDbg.cc
${
SOURCE_DIR
}
/DualTraverse.cc
${
SOURCE_DIR
}
/ElementData.cc
${
SOURCE_DIR
}
/ComponentTraverseInfo.cc
${
SOURCE_DIR
}
/CreatorMap.cc
${
SOURCE_DIR
}
/ProblemInterpolScal.cc
${
SOURCE_DIR
}
/ProblemInterpolVec.cc
${
SOURCE_DIR
}
/MacroReader.cc
${
SOURCE_DIR
}
/ValueReader.cc
${
SOURCE_DIR
}
/Projection.cc
${
SOURCE_DIR
}
/SubAssembler.cc
${
SOURCE_DIR
}
/ZeroOrderAssembler.cc
${
SOURCE_DIR
}
/FirstOrderAssembler.cc
${
SOURCE_DIR
}
/SecondOrderAssembler.cc
${
SOURCE_DIR
}
/Assembler.cc
${
SOURCE_DIR
}
/AdaptInfo.cc
${
SOURCE_DIR
}
/Marker.cc
${
SOURCE_DIR
}
/SurfaceQuadrature.cc
${
SOURCE_DIR
}
/LeafData.cc
${
SOURCE_DIR
}
/BoundaryManager.cc
${
SOURCE_DIR
}
/DirichletBC.cc
${
SOURCE_DIR
}
/RobinBC.cc
${
SOURCE_DIR
}
/FileWriter.cc
${
SOURCE_DIR
}
/ElementFileWriter.cc
${
SOURCE_DIR
}
/ElInfo.cc
${
SOURCE_DIR
}
/ElInfoStack.cc
${
SOURCE_DIR
}
/OperatorTerm.cc
${
SOURCE_DIR
}
/ZeroOrderTerm.cc
${
SOURCE_DIR
}
/FirstOrderTerm.cc
${
SOURCE_DIR
}
/SecondOrderTerm.cc
${
SOURCE_DIR
}
/Operator.cc
${
SOURCE_DIR
}
/Mesh.cc
${
SOURCE_DIR
}
/MeshStructure.cc
${
SOURCE_DIR
}
/AdaptStationary.cc
${
SOURCE_DIR
}
/AdaptInstationary.cc
${
SOURCE_DIR
}
/DOFVector.cc
${
SOURCE_DIR
}
/Estimator.cc
${
SOURCE_DIR
}
/ProblemInstat.cc
${
SOURCE_DIR
}
/ProblemNonLin.cc
${
SOURCE_DIR
}
/NonLinUpdater.cc
${
SOURCE_DIR
}
/QPsiPhi.cc
${
SOURCE_DIR
}
/BasisFunction.cc
${
SOURCE_DIR
}
/Boundary.cc
${
SOURCE_DIR
}
/CoarseningManager.cc
${
SOURCE_DIR
}
/CoarseningManager1d.cc
${
SOURCE_DIR
}
/CoarseningManager2d.cc
${
SOURCE_DIR
}
/CoarseningManager3d.cc
${
SOURCE_DIR
}
/DOFAdmin.cc
${
SOURCE_DIR
}
/DOFMatrix.cc
${
SOURCE_DIR
}
/Element.cc
${
SOURCE_DIR
}
/ElInfo1d.cc
${
SOURCE_DIR
}
/ElInfo2d.cc
${
SOURCE_DIR
}
/ElInfo3d.cc
${
SOURCE_DIR
}
/FiniteElemSpace.cc
${
SOURCE_DIR
}
/FixVec.cc
${
SOURCE_DIR
}
/Global.cc
${
SOURCE_DIR
}
/Lagrange.cc
${
SOURCE_DIR
}
/Line.cc
${
SOURCE_DIR
}
/MacroElement.cc
${
SOURCE_DIR
}
/MacroWriter.cc
${
SOURCE_DIR
}
/Parameters.cc
${
SOURCE_DIR
}
/Parametric.cc
${
SOURCE_DIR
}
/Quadrature.cc
${
SOURCE_DIR
}
/RCNeighbourList.cc
${
SOURCE_DIR
}
/RefinementManager.cc
${
SOURCE_DIR
}
/RefinementManager1d.cc
${
SOURCE_DIR
}
/RefinementManager2d.cc
${
SOURCE_DIR
}
/RefinementManager3d.cc
${
SOURCE_DIR
}
/Tetrahedron.cc
${
SOURCE_DIR
}
/Traverse.cc
${
SOURCE_DIR
}
/TraverseParallel.cc
${
SOURCE_DIR
}
/Triangle.cc
${
SOURCE_DIR
}
/TecPlotWriter.cc
${
SOURCE_DIR
}
/ValueWriter.cc
${
SOURCE_DIR
}
/VtkWriter.cc
${
SOURCE_DIR
}
/PngWriter.cc
${
SOURCE_DIR
}
/PovrayWriter.cc
${
SOURCE_DIR
}
/DataCollector.cc
${
SOURCE_DIR
}
/ScalableQuadrature.cc
${
SOURCE_DIR
}
/SubElInfo.cc
${
SOURCE_DIR
}
/parallel/InteriorBoundary.cc
${
SOURCE_DIR
}
/ElementDofIterator.cc
${
SOURCE_DIR
}
/Debug.cc
)
if
(
ENABLE_PARMETIS
)
find_package
(
MPI REQUIRED
)
INCLUDE
(
CMakeForceCompiler
)
CMAKE_FORCE_C_COMPILER
(
mpicc
"MPI C compiler"
)
CMAKE_FORCE_CXX_COMPILER
(
mpiCC
"MPI C++ compiler"
)
include_directories
(
${
LIB_DIR
}
/ParMetis-3.1
)
SET
(
PARALLEL_AMDIS_SRC
${
SOURCE_DIR
}
/ConditionalEstimator.cc
${
SOURCE_DIR
}
/ConditionalMarker.cc
${
SOURCE_DIR
}
/ParallelProblem.cc
${
SOURCE_DIR
}
/ParMetisPartitioner.cc
${
SOURCE_DIR
}
/PollutionError.cc
)
SET
(
COMPILEFLAGS
"
${
COMPILEFLAGS
}
-DHAVE_PARALLEL_AMDIS=1"
)
endif
(
ENABLE_PARMETIS
)
if
(
ENABLE_PARALLEL_DOMAIN
)
include_directories
(
${
PETSC_DIR
}
/include
${
PETSC_DIR
}
/
${
PETSC_ARCH
}
/include
)
SET
(
PARALLEL_DOMAIN_AMDIS_SRC
${
SOURCE_DIR
}
/parallel/ParallelDomainBase.cc
${
SOURCE_DIR
}
/parallel/StdMpi.cc
${
SOURCE_DIR
}
/parallel/ParallelDomainDbg.cc
${
SOURCE_DIR
}
/parallel/GlobalMatrixSolver.cc
${
SOURCE_DIR
}
/parallel/MpiHelper.cc
)
SET
(
COMPILEFLAGS
"
${
COMPILEFLAGS
}
-DHAVE_PARALLEL_DOMAIN_AMDIS=1"
)
endif
(
ENABLE_PARALLEL_DOMAIN
)
if
(
ENABLE_DEBUG
)
SET
(
COMPILEFLAGS
"
${
COMPILEFLAGS
}
-g -O0 -DDEBUG=1"
)
endif
(
ENABLE_DEBUG
)
if
(
ENABLE_OPENMP
)
if
(
ENABLE_INTEL
)
SET
(
COMPILEFLAGS
"
${
COMPILEFLAGS
}
-openmp"
)
else
(
ENABLE_INTEL
)
SET
(
COMPILEFLAGS
"
${
COMPILEFLAGS
}
-fopenmp"
)
endif
(
ENABLE_INTEL
)
endif
(
ENABLE_OPENMP
)
if
(
ENABLE_UMFPACK
)
include_directories
(
${
LIB_DIR
}
/UFconfig
${
LIB_DIR
}
/AMD/Include
${
LIB_DIR
}
/UMFPACK/Include
)
SET
(
COMPILEFLAGS
"
${
COMPILEFLAGS
}
-DHAVE_UMFPACK=1 -DMTL_HAS_UMFPACK"
)
endif
(
ENABLE_UMFPACK
)
if
(
ENABLE_MKL
)
include_directories
(
${
MKL_DIR
}
)
SET
(
COMPILEFLAGS
"
${
COMPILEFLAGS
}
-DHAVE_MKL=1"
)
endif
(
ENABLE_MKL
)
if
(
ENABLE_DUNE
)
include_directories
(
${
DUNE_DIR
}
)
SET
(
COMPILEFLAGS
"
${
COMPILEFLAGS
}
-DHAVE_DUNE=1"
)
endif
(
ENABLE_DUNE
)
if
(
ENABLE_BOOST
)
SET
(
COMPILEFLAGS
"
${
COMPILEFLAGS
}
-DHAVE_BOOST=1"
)
endif
(
ENABLE_BOOST
)
SET
(
COMPOSITE_SOURCE_DIR compositeFEM/src
)
SET
(
COMPOSITE_FEM_SRC
${
COMPOSITE_SOURCE_DIR
}
/CFE_Integration.cc
${
COMPOSITE_SOURCE_DIR
}
/CFE_NormAndErrorFcts.cc
${
COMPOSITE_SOURCE_DIR
}
/CompositeFEMMethods.cc
${
COMPOSITE_SOURCE_DIR
}
/LevelSetAdaptMesh.cc
${
COMPOSITE_SOURCE_DIR
}
/PenaltyOperator.cc
${
COMPOSITE_SOURCE_DIR
}
/ElementLevelSet.cc
${
COMPOSITE_SOURCE_DIR
}
/CompositeFEMOperator.cc
${
COMPOSITE_SOURCE_DIR
}
/SubPolytope.cc
${
COMPOSITE_SOURCE_DIR
}
/SubElementAssembler.cc
)
#mtl4 includes
include_directories
(
${
LIB_DIR
}
/mtl4
)
include_directories
(
${
SOURCE_DIR
}
)
add_library
(
amdis SHARED
${
AMDIS_SRC
}
${
PARALLEL_AMDIS_SRC
}
${
PARALLEL_DOMAIN_AMDIS_SRC
}
)
add_library
(
compositeFEM SHARED
${
COMPOSITE_FEM_SRC
}
)
SET_TARGET_PROPERTIES
(
amdis PROPERTIES COMPILE_FLAGS
"
${
COMPILEFLAGS
}
"
)
if
(
ENABLE_MARMOT
)
Message
(
"please set marmotcc manually"
)
endif
(
ENABLE_MARMOT
)
install
(
TARGETS amdis compositeFEM
LIBRARY DESTINATION lib
)
if
(
ENABLE_GUI
)
add_subdirectory
(
other/tools/amdis_gui
)
endif
(
ENABLE_GUI
)
if
(
ENABLE_TESTS
)
#ENABLE_TESTING()
#add_test(demo_test run_test.sh)
#add_test(demo_test ${CMAKE_CTEST_COMMAND} --build-and-test "${CMAKE_SOURCE_DIR}/test/demo_test" "${CMAKE_BINARY_DIR}/test/demo_test" --build-generator "${CMAKE_GENERATOR}" --build-makeprogram "${CMAKE_MAKE_PROGRAM}" "${CMAKE_BINARY_DIR}/test/demo_test")
endif
(
ENABLE_TESTS
)
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