And fixed small bug in parallel code.

AMDiS/libtool

@@ -128,7 +128,7 @@ old_postinstall_cmds="chmod 644 \$oldlib~\$RANLIB \$oldlib"
 old_postuninstall_cmds=""
 
 # A C compiler.
-LTCC="gcc"
+LTCC="/licsoft/libraries/openmpi/1.2.6/64bit/bin/mpicc"
 
 # LTCC compiler flags.
 LTCFLAGS="-g -O2"
@@ -259,7 +259,7 @@ LD="/usr/x86_64-suse-linux/bin/ld -m elf_x86_64"
 old_archive_cmds="\$AR \$AR_FLAGS \$oldlib\$oldobjs~\$RANLIB \$oldlib"
 
 # A language specific compiler.
-CC="gcc"
+CC="/licsoft/libraries/openmpi/1.2.6/64bit/bin/mpicc"
 
 # Is the compiler the GNU compiler?
 with_gcc=yes
@@ -274,7 +274,7 @@ wl="-Wl,"
 pic_flag=" -fPIC -DPIC"
 
 # Compiler flag to prevent dynamic linking.
-link_static_flag="-static"
+link_static_flag=""
 
 # Does compiler simultaneously support -c and -o options?
 compiler_c_o="yes"
@@ -8914,7 +8914,7 @@ LD="/usr/x86_64-suse-linux/bin/ld -m elf_x86_64"
 old_archive_cmds="\$AR \$AR_FLAGS \$oldlib\$oldobjs~\$RANLIB \$oldlib"
 
 # A language specific compiler.
-CC="g++"
+CC="/licsoft/libraries/openmpi/1.2.6/64bit/bin/mpicxx"
 
 # Is the compiler the GNU compiler?
 with_gcc=yes
@@ -8929,7 +8929,7 @@ wl="-Wl,"
 pic_flag=" -fPIC -DPIC"
 
 # Compiler flag to prevent dynamic linking.
-link_static_flag="-static"
+link_static_flag=""
 
 # Does compiler simultaneously support -c and -o options?
 compiler_c_o="yes"
@@ -9039,17 +9039,17 @@ file_list_spec=""
 hardcode_action=immediate
 
 # The directories searched by this compiler when creating a shared library.
-compiler_lib_search_dirs="/usr/lib64/gcc/x86_64-suse-linux/4.1.2 /usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../../lib64 /lib/../lib64 /usr/lib/../lib64 /fastfs/wir/local/lib /usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../../x86_64-suse-linux/lib /usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../.."
+compiler_lib_search_dirs="/usr/lib64 /licsoft/libraries/openmpi/1.2.6/64bit/lib /usr/lib64/gcc/x86_64-suse-linux/4.1.2 /usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../../lib64 /lib/../lib64 /usr/lib/../lib64 /fastfs/wir/local/lib /usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../../x86_64-suse-linux/lib /usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../.."
 
 # Dependencies to place before and after the objects being linked to
 # create a shared library.
 predep_objects="/usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../../lib64/crti.o /usr/lib64/gcc/x86_64-suse-linux/4.1.2/crtbeginS.o"
 postdep_objects="/usr/lib64/gcc/x86_64-suse-linux/4.1.2/crtendS.o /usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../../lib64/crtn.o"
 predeps=""
-postdeps="-lstdc++ -lm -lgcc_s -lc -lgcc_s"
+postdeps="-lmpi_cxx -lmpi -lopen-rte -lopen-pal -libverbs -lrt -lnuma -ldl -lnsl -lutil -ldl -lstdc++ -lm -lgcc_s -lpthread -lc -lgcc_s"
 
 # The library search path used internally by the compiler when linking
 # a shared library.
-compiler_lib_search_path="-L/usr/lib64/gcc/x86_64-suse-linux/4.1.2 -L/usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/fastfs/wir/local/lib -L/usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../../x86_64-suse-linux/lib -L/usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../.."
+compiler_lib_search_path="-L/usr/lib64 -L/licsoft/libraries/openmpi/1.2.6/64bit/lib -L/usr/lib64/gcc/x86_64-suse-linux/4.1.2 -L/usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/fastfs/wir/local/lib -L/usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../../x86_64-suse-linux/lib -L/usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../.."
 
 # ### END LIBTOOL TAG CONFIG: CXX

AMDiS/src/Mesh.cc

@@ -1146,13 +1146,18 @@ namespace AMDiS {
     if (macroFilename.length()) {
 
 #ifdef HAVE_PARALLEL_DOMAIN_AMDIS
-      if (checkParallelMacroFile(macroFilename, periodicFilename, check)) 
+      if (checkParallelMacroFile(macroFilename, periodicFilename, check)) {
+	std::string newPeriodicFilename = "";
+	if (periodicFilename != "")
+	  newPeriodicFilename = periodicFilename + ".tmp";
+
 	macroFileInfo = 
 	  MacroReader::readMacro(macroFilename + ".tmp", this, 
-				 periodicFilename + ".tmp", check);
-      else
+				 newPeriodicFilename, check);
+      } else {
 	macroFileInfo = 
 	  MacroReader::readMacro(macroFilename, this, periodicFilename, check);
+      }
 
 #else
       // In sequentiel computations just read the macro file to the mesh.